Carg20525 (gene) Silver-seed gourd

Overview
NameCarg20525
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAuxin-responsive protein
LocationCucurbita_argyrosperma_scaffold_113 : 74988 .. 77015 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGTAAGTTATACAGTTCAAAACTGTTGGTTTCTTTTTTTGTTACATGTTCTGATGTGTAATCATGACCTTTATTTCTTTAGAATGCATATAGCACGTGAAGTAGTCAAGAAATCTCTCTGAATTGTATTGCTTGTATTGCTTGGTTTTTGTTTTTTTTGTTTTTTTTGCTTTTTGCTGTTTTGTTGGGTATATGTCTGAAGAGAAACGATATAATTTTTAGAGGGGTGGAGAGATTTTGGAGGATGATAATGTTTGAAGAGGTTGCTAGGTTTAATACTTCTTATGAGCGTTCATCCGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAATTATCAACTTGGTTTGGTTCTTTTGAATTGGAATCTCTTCTTGTAGTTAGTTTTGAGATTCCTTTTGTGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGCCATTGTACATTCTTTCATTCTTCTCAATAAAAGCTTGATTTCTTACCCAAAAATAAAAAATAAAAAAACAATAATAAAAAGAATAAAAAATGCAAGAAGTCTGGCGAAAACCAGAAAGCTTCTGTCTGGACTAATGACCGTAATTAAAAGAACCTACTGTCCCCTTTCAAATTCCTTTTAAGCAATCGTGAGACTGTTTTTGTGAACATTTTTATTTATATTGATTGAGCATTTACCATTTTCATATTTCCAATAGTAGCTATGTTAGTTGTTACCATCTGAAGATGCCATTTAACCAAAAACCAAAATATTTGCAGTTGGCAATGGATGAAGTTTTAAGATATTCCTGTCAATAATAATACTATGATTACTATCATTGTGATAAATTAAAATAGGAAACATCTAATTTCTGATTTCATTAATCCAGGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGGTGAGTATTTTGATATATCTATTATGAATTATTGAACACATTAGATTCTGCAGCATGACACATGCCTCCATCTGCATAATAGAACTAAATACAGAAATTGTATACATGCGAACGACATATGGCGCTTTTACTTAACTCCATTGAAGGCAAAGAAGCGTACGTGATGGCTAATGGAGATTTACCAACCATCAGCAGTACATCCTGCGTCCAATAGGGATTTAATGATCTTATATTGACTGGTTGATTATTTCGGTTCTCGTTCTATTCTTCATCATTCTCATTAATAGCTCACTCCCCTTGGAATGATTAATAGGGTGCTACATATGAAATTACATTAAGCTGATGGTATCATGTGTGGTGAAACTATTGGAACATGAAACTATATGCAAACCTTGGTTCTCATTTTGAATTTTAAATACAAAAAATTGTTGACTATTATATATGTGCAGAACAAAGAATTTCGAACACGGTATCCCGAGGTCTGTTCTCATTAGTTTTCATTGTTTTTTTACAGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAGCTAAGCACTATGCCATGGTTGATGCTGTCCATCCAAATGTTGGAATAAGATAGATCTGAAACTAAAAAAAACGTCATATGTGGCTCTGGAAGGTGGTTCCAAGAATGATGGAGTGTTGGATGGGATAGGTTCTTGTGTGCTTCCTCTGTTACATTATGTTTTTATAATTATGTTTATGTTACTTTGGTGATGTCTAAGCAGTTTCCCTAGTTTGTGAATTGAAGTACTTAAAAACTATTTAAGAGCAAGTCTGCAGATCTGTGGGCAAGTTCCTGTTCCTCATTTGCAGGACTCTCAAAAAGTTTGTAAAGTTATTGGTTATCAAACTGTGTTGCTTGAATGCTCTGTTGTAAACTTTCTTCTCTTTGACTTGATTCCTTCAAATCCTACTACTACTACCTGAATGTTCTTCTAGTTTTACCAAATACATTTTTTC

mRNA sequence

ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAGCTAAGCACTATGCCATGGTTGATGCTGTCCATCCAAATGTTGGAATAAGATAGATCTGAAACTAAAAAAAACGTCATATGTGGCTCTGGAAGGTGGTTCCAAGAATGATGGAGTGTTGGATGGGATAGGTTCTTGTGTGCTTCCTCTGTTACATTATGTTTTTATAATTATGTTTATGTTACTTTGGTGATGTCTAAGCAGTTTCCCTAGTTTGTGAATTGAAGTACTTAAAAACTATTTAAGAGCAAGTCTGCAGATCTGTGGGCAAGTTCCTGTTCCTCATTTGCAGGACTCTCAAAAAGTTTGTAAAGTTATTGGTTATCAAACTGTGTTGCTTGAATGCTCTGTTGTAAACTTTCTTCTCTTTGACTTGATTCCTTCAAATCCTACTACTACTACCTGAATGTTCTTCTAGTTTTACCAAATACATTTTTTC

Coding sequence (CDS)

ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAG

Protein sequence

MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Homology
[Close]
BLAST of Carg20525 vs. NCBI nr
Match: XP_022951336.1 (auxin-responsive protein IAA9-like [Cucurbita moschata] >XP_022951337.1 auxin-responsive protein IAA9-like [Cucurbita moschata] >XP_022951338.1 auxin-responsive protein IAA9-like [Cucurbita moschata])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNRK 68
           EKCRNRK
Sbjct: 349 EKCRNRK 355

[Close]
BLAST of Carg20525 vs. NCBI nr
Match: XP_023002083.1 (auxin-responsive protein IAA9-like [Cucurbita maxima] >XP_023002084.1 auxin-responsive protein IAA9-like [Cucurbita maxima] >XP_023002085.1 auxin-responsive protein IAA9-like [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNRK 68
           EKCRNRK
Sbjct: 349 EKCRNRK 355

[Close]
BLAST of Carg20525 vs. NCBI nr
Match: XP_023537439.1 (auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo] >XP_023537440.1 auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo] >XP_023537441.1 auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNRK 68
           EKCRNRK
Sbjct: 349 EKCRNRK 355

[Close]
BLAST of Carg20525 vs. NCBI nr
Match: XP_008444965.1 (PREDICTED: auxin-responsive protein IAA9-like [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 9.7e-30
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNR 67
           EKCRNR
Sbjct: 349 EKCRNR 354

[Close]
BLAST of Carg20525 vs. NCBI nr
Match: NP_001267710.1 (auxin-responsive protein IAA9-like [Cucumis sativus] >BAA85821.1 Aux/IAA protein [Cucumis sativus] >KGN62776.1 hypothetical protein Csa_2G372720 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 9.7e-30
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNR 67
           EKCRNR
Sbjct: 349 EKCRNR 354

[Close]
BLAST of Carg20525 vs. TAIR10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-28
Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESKL DLL+GS+YV TYEDKD DWMLVGDVPWEMF+DSCKR+RIMK S+AIGLAPRA+
Sbjct: 170 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRAL 229

Query: 61  EKCRNR 67
           EKC+NR
Sbjct: 230 EKCKNR 235

[Close]
BLAST of Carg20525 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2)

HSP 1 Score: 117.9 bits (294), Expect = 2.5e-27
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           ++ES+L DLL GSEYV+TYEDKD+DWMLVGDVPWEMFI SCK+LRIMKSS+AIGLAPR +
Sbjct: 239 LNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVM 298

Query: 61  EKCRNR 67
           EKCR+R
Sbjct: 299 EKCRSR 304

[Close]
BLAST of Carg20525 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8)

HSP 1 Score: 112.8 bits (281), Expect = 8.0e-26
Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSE KLKDLLHGSE+VLTYEDKD DWMLVGDVPWE+F ++C++L+IMK SD+IGLAP AV
Sbjct: 270 MSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAV 329

Query: 61  EKCRNRK 68
           EK +N++
Sbjct: 330 EKSKNKE 336

[Close]
BLAST of Carg20525 vs. TAIR10
Match: AT3G23050.1 (indole-3-acetic acid 7)

HSP 1 Score: 111.3 bits (277), Expect = 2.3e-25
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESKL +LL+ SEYV +YEDKD DWMLVGDVPWEMF++SCKRLRIMK S+A+GLAPRA+
Sbjct: 176 MNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAM 235

Query: 61  EK-CRNR 67
           EK C+NR
Sbjct: 236 EKYCKNR 242

[Close]
BLAST of Carg20525 vs. TAIR10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14)

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-25
Identity = 50/66 (75.76%), Postives = 59/66 (89.39%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESK+ DLL+ SEYV +YEDKD DWMLVGDVPW MF++SCKRLRIMK S+AIGLAPRA+
Sbjct: 162 MNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAM 221

Query: 61  EKCRNR 67
           EK +NR
Sbjct: 222 EKFKNR 227

[Close]
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|P0C132|IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.0e-27
Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESK+ DLL+GSEYV TYEDKD DWMLVGDVPWEMF++SCKRLRIMK S+AIGLAPRA+
Sbjct: 211 MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAM 270

Query: 61  EKCRNR 67
           EKC+NR
Sbjct: 271 EKCKNR 276

[Close]
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|O24407|IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-27
Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESKL DLL+GS+YV TYEDKD DWMLVGDVPWEMF+DSCKR+RIMK S+AIGLAPRA+
Sbjct: 170 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRAL 229

Query: 61  EKCRNR 67
           EKC+NR
Sbjct: 230 EKCKNR 235

[Close]
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q9ZSY8|IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-26
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           ++ES+L DLL GSEYV+TYEDKD+DWMLVGDVPWEMFI SCK+LRIMKSS+AIGLAPR +
Sbjct: 239 LNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVM 298

Query: 61  EKCRNR 67
           EKCR+R
Sbjct: 299 EKCRSR 304

[Close]
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q38826|IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-24
Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSE KLKDLLHGSE+VLTYEDKD DWMLVGDVPWE+F ++C++L+IMK SD+IGLAP AV
Sbjct: 253 MSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAV 312

Query: 61  EKCRNRK 68
           EK +N++
Sbjct: 313 EKSKNKE 319

[Close]
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q38825|IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.2e-24
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           M+ESKL +LL+ SEYV +YEDKD DWMLVGDVPWEMF++SCKRLRIMK S+A+GLAPRA+
Sbjct: 176 MNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAM 235

Query: 61  EK-CRNR 67
           EK C+NR
Sbjct: 236 EKYCKNR 242

[Close]
BLAST of Carg20525 vs. TrEMBL
Match: tr|Q9SSY2|Q9SSY2_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA2 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-30
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNR 67
           EKCRNR
Sbjct: 349 EKCRNR 354

[Close]
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A1S3BBL3|A0A1S3BBL3_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488149 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-30
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV
Sbjct: 289 MSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 348

Query: 61  EKCRNR 67
           EKCRNR
Sbjct: 349 EKCRNR 354

[Close]
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A1U8B3T8|A0A1U8B3T8_NELNU (Auxin-responsive protein OS=Nelumbo nucifera OX=4432 GN=LOC104610541 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           +SESKL+DLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRA+
Sbjct: 322 LSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAM 381

Query: 61  EKCRNR 67
           EKCRNR
Sbjct: 382 EKCRNR 387

[Close]
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A251LD14|A0A251LD14_MANES (Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_05G187100 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           +SESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFID+CKRLRIMKSSDAIGLAPRAV
Sbjct: 302 LSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSSDAIGLAPRAV 361

Query: 61  EKCRNR 67
           EKC+NR
Sbjct: 362 EKCKNR 367

[Close]
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A251IQY1|A0A251IQY1_MANES (Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_18G054900 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAV 60
           +SESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFID+CKRLRIMKSSDAIGLAPRAV
Sbjct: 302 LSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSSDAIGLAPRAV 361

Query: 61  EKCRNR 67
           EKC+NR
Sbjct: 362 EKCKNR 367

The following BLAST results are available for this feature:
BLAST of Carg20525 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951336.11.2e-30100.00auxin-responsive protein IAA9-like [Cucurbita moschata] >XP_022951337.1 auxin-re... [more]
XP_023002083.11.2e-30100.00auxin-responsive protein IAA9-like [Cucurbita maxima] >XP_023002084.1 auxin-resp... [more]
XP_023537439.11.2e-30100.00auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo] >XP_023537440.1 ... [more]
XP_008444965.19.7e-3098.48PREDICTED: auxin-responsive protein IAA9-like [Cucumis melo][more]
NP_001267710.19.7e-3098.48auxin-responsive protein IAA9-like [Cucumis sativus] >BAA85821.1 Aux/IAA protein... [more]
BLAST of Carg20525 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04730.12.9e-2881.82indoleacetic acid-induced protein 16[more]
AT4G29080.12.5e-2780.30phytochrome-associated protein 2[more]
AT2G22670.48.0e-2674.63indoleacetic acid-induced protein 8[more]
AT3G23050.12.3e-2576.12indole-3-acetic acid 7[more]
AT4G14550.13.9e-2575.76indole-3-acetic acid inducible 14[more]
BLAST of Carg20525 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P0C132|IAA30_ORYSJ4.0e-2781.82Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30... [more]
sp|O24407|IAA16_ARATH5.3e-2781.82Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=... [more]
sp|Q9ZSY8|IAA27_ARATH4.5e-2680.30Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=... [more]
sp|Q38826|IAA8_ARATH1.4e-2474.63Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1[more]
sp|Q38825|IAA7_ARATH4.2e-2476.12Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1[more]
BLAST of Carg20525 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q9SSY2|Q9SSY2_CUCSA6.4e-3098.48Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA2 PE=2 SV=1[more]
tr|A0A1S3BBL3|A0A1S3BBL3_CUCME6.4e-3098.48Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488149 PE=3 SV=1[more]
tr|A0A1U8B3T8|A0A1U8B3T8_NELNU7.1e-2993.94Auxin-responsive protein OS=Nelumbo nucifera OX=4432 GN=LOC104610541 PE=3 SV=1[more]
tr|A0A251LD14|A0A251LD14_MANES7.1e-2993.94Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_05G187100 PE=3 SV... [more]
tr|A0A251IQY1|A0A251IQY1_MANES7.1e-2993.94Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_18G054900 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
IPR033389AUX/IAA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20525-RACarg20525-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..62
e-value: 2.7E-24
score: 87.0
NoneNo IPR availablePANTHERPTHR31734:SF18SUBFAMILY NOT NAMEDcoord: 1..66
NoneNo IPR availableSUPERFAMILYSSF54277CAD & PB1 domainscoord: 11..48
IPR033389AUX/IAA domainPFAMPF02309AUX_IAAcoord: 1..58
e-value: 1.4E-35
score: 123.3
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 1..66
IPR000270PB1 domainPROSITEPS51745PB1coord: 1..49
score: 15.478

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg20525Cucurbita maxima (Rimu)carcmaB0920
Carg20525Cucurbita moschata (Rifu)carcmoB0893
Carg20525Cucurbita pepo (Zucchini)carcpeB0925