Carg20444 (gene) Silver-seed gourd

Overview
NameCarg20444
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box protein
LocationCucurbita_argyrosperma_scaffold_172 : 12434 .. 13781 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCCCTCTGCGTTTGACTGTGTCAGATATCAGCCTCTCTCCCATGAGAACCAACATGAAGAAGAGAGCTTCACAAACAAATTTACAGTATTTCTCCGGTTCCCCCAAAAGGAGGCGCTTTTCCCCGCCGCGCTCCTCCGCCGTAGTTTCTGATTTTTTTCAGTCCTTGCCGGACGACCTCCTCATCTCTATCCTCTCTAAGCTCAGCGCCACCGCTTCTTCCCCGTCGGATTTCATCAGCGCTTTGATTACGTACGTTATATGTTTTTTCCTTTTTCCTTTTTTTTTTTTTTTTTTGGGGTTATGAATCGATTTGGCTGATTGAATTTGGTGTAACAGATGCAAGAGATTCAACAATTTAGGGCGTCATTCGCTTGTTTTGGCCAAGGCTTCCCAGAAAACTTTGGCAATCGGAGCTAAAAACTGGTCGGAATCCGCTCACCGGTTTCTTAAACACTGCGTTGACGCCGGCAACGTTGAGGCTTGCTATATTCTCGGCATGGTAACTACAAACACCTTGAAAATTTTAACGATTTTTTGATTTTGGGTCTCTGAATTTCTGTTTTTTTTTTTTTCCTCAGATTCGGTTTTATTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCGGCGATTAGCTCCCACGCGCCGGCGTTGTATTCACTTGCTGTGATACAGTTCAACGGTAGCGGTGGCTCGAAGAACGATAAGGATTTGAGAGCGGGAGTGGCGCTTTGTGCCAGGGCTGCGTTTTTGGGTCATATTGATGCTTTAAGGGAGCTTGGACATTGCCTTCAAGATGGCTATGGTGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTCTCGTCCAAGCCAACGCACGGGAACTCGCTGCCGTGCTGTCATCAACGGCGGCCACAGTTACCGGCGGAGCTGCGCGTTCTTGGGTCACGTGCGATCCACACACGCACCACCGCGCAGCGGTGGGGTCGTCCACCGAGTGTCCGTTGCTAAGTGATTTCGGCTGTAATGTCCCGGCGGCGGAGGCTCATCCGGCGAGCCGGTTTATGGCGGAGTGGTTCGCTATACGCGGCGGGCCACCGGGGCCGGGGCTGAGGCTGTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACAAGGAGGCACGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTTGATTGGAAGCTGCAGCATAAGGCGGAATGTTCGCCTTTGGAGCTATGGCCGGAAAATGAGGGCGAAGGAGGTGTAGGCGAGGGCGGAGTTGAAAATGAAAACGAAGCGGAGGATGTGATAGAAGAGAGTTAA

mRNA sequence

CTTTTCCCTCTGCGTTTGACTGTGTCAGATATCAGCCTCTCTCCCATGAGAACCAACATGAAGAAGAGAGCTTCACAAACAAATTTACAGTATTTCTCCGGTTCCCCCAAAAGGAGGCGCTTTTCCCCGCCGCGCTCCTCCGCCGTAGTTTCTGATTTTTTTCAGTCCTTGCCGGACGACCTCCTCATCTCTATCCTCTCTAAGCTCAGCGCCACCGCTTCTTCCCCGTCGGATTTCATCAGCGCTTTGATTACATGCAAGAGATTCAACAATTTAGGGCGTCATTCGCTTGTTTTGGCCAAGGCTTCCCAGAAAACTTTGGCAATCGGAGCTAAAAACTGGTCGGAATCCGCTCACCGGTTTCTTAAACACTGCGTTGACGCCGGCAACGTTGAGGCTTGCTATATTCTCGGCATGATTCGGTTTTATTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCGGCGATTAGCTCCCACGCGCCGGCGTTGTATTCACTTGCTGTGATACAGTTCAACGGTAGCGGTGGCTCGAAGAACGATAAGGATTTGAGAGCGGGAGTGGCGCTTTGTGCCAGGGCTGCGTTTTTGGGTCATATTGATGCTTTAAGGGAGCTTGGACATTGCCTTCAAGATGGCTATGGTGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTCTCGTCCAAGCCAACGCACGGGAACTCGCTGCCGTGCTGTCATCAACGGCGGCCACAGTTACCGGCGGAGCTGCGCGTTCTTGGGTCACGTGCGATCCACACACGCACCACCGCGCAGCGGTGGGGTCGTCCACCGAGTGTCCGTTGCTAAGTGATTTCGGCTGTAATGTCCCGGCGGCGGAGGCTCATCCGGCGAGCCGGTTTATGGCGGAGTGGTTCGCTATACGCGGCGGGCCACCGGGGCCGGGGCTGAGGCTGTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACAAGGAGGCACGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTTGATTGGAAGCTGCAGCATAAGGCGGAATGTTCGCCTTTGGAGCTATGGCCGGAAAATGAGGGCGAAGGAGGTGTAGGCGAGGGCGGAGTTGAAAATGAAAACGAAGCGGAGGATGTGATAGAAGAGAGTTAA

Coding sequence (CDS)

ATGAGAACCAACATGAAGAAGAGAGCTTCACAAACAAATTTACAGTATTTCTCCGGTTCCCCCAAAAGGAGGCGCTTTTCCCCGCCGCGCTCCTCCGCCGTAGTTTCTGATTTTTTTCAGTCCTTGCCGGACGACCTCCTCATCTCTATCCTCTCTAAGCTCAGCGCCACCGCTTCTTCCCCGTCGGATTTCATCAGCGCTTTGATTACATGCAAGAGATTCAACAATTTAGGGCGTCATTCGCTTGTTTTGGCCAAGGCTTCCCAGAAAACTTTGGCAATCGGAGCTAAAAACTGGTCGGAATCCGCTCACCGGTTTCTTAAACACTGCGTTGACGCCGGCAACGTTGAGGCTTGCTATATTCTCGGCATGATTCGGTTTTATTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCGGCGATTAGCTCCCACGCGCCGGCGTTGTATTCACTTGCTGTGATACAGTTCAACGGTAGCGGTGGCTCGAAGAACGATAAGGATTTGAGAGCGGGAGTGGCGCTTTGTGCCAGGGCTGCGTTTTTGGGTCATATTGATGCTTTAAGGGAGCTTGGACATTGCCTTCAAGATGGCTATGGTGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTCTCGTCCAAGCCAACGCACGGGAACTCGCTGCCGTGCTGTCATCAACGGCGGCCACAGTTACCGGCGGAGCTGCGCGTTCTTGGGTCACGTGCGATCCACACACGCACCACCGCGCAGCGGTGGGGTCGTCCACCGAGTGTCCGTTGCTAAGTGATTTCGGCTGTAATGTCCCGGCGGCGGAGGCTCATCCGGCGAGCCGGTTTATGGCGGAGTGGTTCGCTATACGCGGCGGGCCACCGGGGCCGGGGCTGAGGCTGTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACAAGGAGGCACGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTTGATTGGAAGCTGCAGCATAAGGCGGAATGTTCGCCTTTGGAGCTATGGCCGGAAAATGAGGGCGAAGGAGGTGTAGGCGAGGGCGGAGTTGAAAATGAAAACGAAGCGGAGGATGTGATAGAAGAGAGTTAA

Protein sequence

MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGEGGVENENEAEDVIEES
Homology
[Close]
BLAST of Carg20444 vs. NCBI nr
Match: XP_022951094.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 762.7 bits (1968), Expect = 6.0e-217
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0 

Query: 1   MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS 60
           MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS
Sbjct: 25  MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS 84

Query: 61  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 120
           PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY
Sbjct: 85  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 144

Query: 121 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 180
           ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA
Sbjct: 145 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 204

Query: 181 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR 240
           RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR
Sbjct: 205 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR 264

Query: 241 SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 300
           SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL
Sbjct: 265 SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 324

Query: 301 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV 360
           CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV
Sbjct: 325 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV 384

Query: 361 GEGGVENENEAEDVIEES 379
           GEGGVENENEAEDVIEES
Sbjct: 385 GEGGVENENEAEDVIEES 402

[Close]
BLAST of Carg20444 vs. NCBI nr
Match: XP_023537715.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 761.1 bits (1964), Expect = 1.7e-216
Identity = 377/378 (99.74%), Postives = 377/378 (99.74%), Query Frame = 0 

Query: 1   MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS 60
           MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS
Sbjct: 1   MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS 60

Query: 61  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 120
           PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY
Sbjct: 61  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 120

Query: 121 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 180
           ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA
Sbjct: 121 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 180

Query: 181 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR 240
           RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR
Sbjct: 181 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR 240

Query: 241 SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 300
           SWVTCDPHTHHR AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL
Sbjct: 241 SWVTCDPHTHHRTAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 300

Query: 301 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV 360
           CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV
Sbjct: 301 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV 360

Query: 361 GEGGVENENEAEDVIEES 379
           GEGGVENENEAEDVIEES
Sbjct: 361 GEGGVENENEAEDVIEES 378

[Close]
BLAST of Carg20444 vs. NCBI nr
Match: XP_023002802.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 710.3 bits (1832), Expect = 3.5e-201
Identity = 357/380 (93.95%), Postives = 358/380 (94.21%), Query Frame = 0 

Query: 1   MRTNMKKRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASS 60
           MRTNMKKRASQTNLQYFSGSPKR+RFSPPRSSA VSDFFQSLPDDLLISILSKLSA ASS
Sbjct: 25  MRTNMKKRASQTNLQYFSGSPKRKRFSPPRSSAAVSDFFQSLPDDLLISILSKLSANASS 84

Query: 61  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 120
           PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY
Sbjct: 85  PSDFISALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACY 144

Query: 121 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 180
           ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA
Sbjct: 145 ILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCA 204

Query: 181 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAAR 240
           RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAAT TGGAAR
Sbjct: 205 RAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATATGGAAR 264

Query: 241 SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 300
           SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL
Sbjct: 265 SWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRL 324

Query: 301 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPEN--EGEG 360
           CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPEN      
Sbjct: 325 CSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENXXXXXX 384

Query: 361 GVGEGGVENENEAEDVIEES 379
                        EDVIEES
Sbjct: 385 XXXXXXXXXXXXXEDVIEES 404

[Close]
BLAST of Carg20444 vs. NCBI nr
Match: XP_008444448.1 (PREDICTED: F-box protein At1g67340-like [Cucumis melo])

HSP 1 Score: 614.0 bits (1582), Expect = 3.4e-172
Identity = 307/359 (85.52%), Postives = 326/359 (90.81%), Query Frame = 0 

Query: 22  KRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHS 81
           KR RF P       SDFF SLPDDLLISILSKL+++ASSPS FI+ALITCKRFN+LGRHS
Sbjct: 16  KRNRFYPK------SDFFDSLPDDLLISILSKLASSASSPSHFINALITCKRFNHLGRHS 75

Query: 82  LVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 141
           LVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMA
Sbjct: 76  LVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 135

Query: 142 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 201
           KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG
Sbjct: 136 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 195

Query: 202 YGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTEC 261
           YGVCQNIMEGRRFLVQANARELAAVLSS ++     A+RSWVTC+P   HR AVGSS+EC
Sbjct: 196 YGVCQNIMEGRRFLVQANARELAAVLSSPSS----AASRSWVTCNPQAIHRTAVGSSSEC 255

Query: 262 PLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSV 321
           PLLSDFGCNVPA EAHPASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSV
Sbjct: 256 PLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSV 315

Query: 322 CGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV--GEGGVENENEAEDVIEES 379
           CGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+ G   GEGG+ NENE EDV+ ES
Sbjct: 316 CGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDGEVDGEGGILNENEDEDVVGES 364

[Close]
BLAST of Carg20444 vs. NCBI nr
Match: XP_004143042.1 (PREDICTED: F-box protein At1g67340-like [Cucumis sativus] >KGN62374.1 hypothetical protein Csa_2G351550 [Cucumis sativus])

HSP 1 Score: 585.1 bits (1507), Expect = 1.7e-163
Identity = 288/335 (85.97%), Postives = 307/335 (91.64%), Query Frame = 0 

Query: 23  RRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHSL 82
           R RF P        DFF SLPDDLLISILSKL ++ASSPS FI+ALITCKRFN+LGRHSL
Sbjct: 17  RNRFYPK------FDFFDSLPDDLLISILSKLVSSASSPSHFINALITCKRFNHLGRHSL 76

Query: 83  VLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMAK 142
           VL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAK
Sbjct: 77  VLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAK 136

Query: 143 AAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 202
           AAISS+APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGY
Sbjct: 137 AAISSYAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGY 196

Query: 203 GVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTECP 262
           GVCQNIMEGRRFLVQANARELAAVLSS ++     A+RS VTC+PH  HR AVGSS++CP
Sbjct: 197 GVCQNIMEGRRFLVQANARELAAVLSSPSS----AASRSLVTCNPHAIHRTAVGSSSDCP 256

Query: 263 LLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSVC 322
           LLSDFGCNVPA EAHPASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVC
Sbjct: 257 LLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC 316

Query: 323 GIVNYCSRACQALDWKLQHKAECSPLELWPENEGE 358
           GIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+
Sbjct: 317 GIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD 341

[Close]
BLAST of Carg20444 vs. TAIR10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 477.2 bits (1227), Expect = 9.1e-135
Identity = 242/368 (65.76%), Postives = 283/368 (76.90%), Query Frame = 0 

Query: 17  FSGSPKRRR-------FSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALI 76
           F+   KRRR        SP   +   +D   S+PDDL+ISIL KL +T+  P+DFI+ L+
Sbjct: 15  FTPGRKRRRCVVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLL 74

Query: 77  TCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYC 136
           TCKR   L  + +VL++ S K +A+ A NWSE +HRFLK CVDAG++EACY LGMIRFYC
Sbjct: 75  TCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYC 134

Query: 137 LQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHID 196
           LQNRG+GASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+D
Sbjct: 135 LQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVD 194

Query: 197 ALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARS-WVTCDPH 256
           ALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAVLSS      G  ARS W++    
Sbjct: 195 ALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSS------GIQARSTWLSLSQP 254

Query: 257 THHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGP-PGPGLRLCSHVGCG 316
                       CPLLSDFGCNVPA E HPA+RF+A+WFA+RGG  PG GLRLCSH GCG
Sbjct: 255 PPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCG 314

Query: 317 RPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGEGGVEN 376
           RPETR+HEFRRCSVCG+VNYCSRACQALDWKL+HK +C+P++ W E EG+GG G   ++ 
Sbjct: 315 RPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLE-EGDGGEGNVQIDG 374

[Close]
BLAST of Carg20444 vs. TAIR10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 392.9 bits (1008), Expect = 2.2e-109
Identity = 204/339 (60.18%), Postives = 247/339 (72.86%), Query Frame = 0 

Query: 35  VSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHSLVLAKASQKTLAI 94
           V++ F+ L DDL+ISIL KL+ +ASSPSDF++ L TCKR N LG H LVL+KA  +TLA+
Sbjct: 18  VNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAV 77

Query: 95  GAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYS 154
            A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI SHAPALYS
Sbjct: 78  TAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYS 137

Query: 155 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRF 214
           L+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV +++ EGRR 
Sbjct: 138 LSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRL 197

Query: 215 LVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAA 274
           L+QANARELA  L            RS++          ++ S  E   L+D    VP  
Sbjct: 198 LIQANARELACSL------------RSYL----------SLKSGDENETLTDLSV-VPVQ 257

Query: 275 EAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQA 334
           E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQA
Sbjct: 258 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 317

Query: 335 LDWKLQHKAECSPLELWPENEGEGGVGEGGVENENEAED 374
           LDW+ +HK EC+PL+LW     E  +G+ G     E +D
Sbjct: 318 LDWRAKHKVECTPLDLWVAAAAE--IGDDGEAVAVEIDD 331

[Close]
BLAST of Carg20444 vs. TAIR10
Match: AT1G17110.2 (ubiquitin-specific protease 15)

HSP 1 Score: 45.4 bits (106), Expect = 8.8e-05
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0 

Query: 318 RCSVCGIVNYCSRACQALDWKLQHKAECSPLE 350
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]
BLAST of Carg20444 vs. TAIR10
Match: AT2G24640.1 (ubiquitin-specific protease 19)

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 19/40 (47.50%), Postives = 23/40 (57.50%), Query Frame = 0 

Query: 306 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC 346
           CG+  T     ++CS C  V YCS ACQ  DWK  HK +C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

[Close]
BLAST of Carg20444 vs. TAIR10
Match: AT4G02220.1 (zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein)

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 27/78 (34.62%), Postives = 33/78 (42.31%), Query Frame = 0 

Query: 293 PPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWP 352
           P G G  LC+  G  + +      + CS C    YCS   QAL W+L HK EC  L    
Sbjct: 180 PLGHGAPLCTWCGTWKGD------KLCSGCKNARYCSPKHQALHWRLGHKTECQQLRTVS 239

Query: 353 ENEGEGGVGEGGVENENE 371
           E    G V  G    E +
Sbjct: 240 ETSDSGPVNNGVAPTEKQ 251

[Close]
BLAST of Carg20444 vs. Swiss-Prot
Match: sp|Q9FYF9|FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-133
Identity = 242/368 (65.76%), Postives = 283/368 (76.90%), Query Frame = 0 

Query: 17  FSGSPKRRR-------FSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALI 76
           F+   KRRR        SP   +   +D   S+PDDL+ISIL KL +T+  P+DFI+ L+
Sbjct: 15  FTPGRKRRRCVVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLL 74

Query: 77  TCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYC 136
           TCKR   L  + +VL++ S K +A+ A NWSE +HRFLK CVDAG++EACY LGMIRFYC
Sbjct: 75  TCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYC 134

Query: 137 LQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHID 196
           LQNRG+GASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+D
Sbjct: 135 LQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVD 194

Query: 197 ALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARS-WVTCDPH 256
           ALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAVLSS      G  ARS W++    
Sbjct: 195 ALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSS------GIQARSTWLSLSQP 254

Query: 257 THHRAAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGP-PGPGLRLCSHVGCG 316
                       CPLLSDFGCNVPA E HPA+RF+A+WFA+RGG  PG GLRLCSH GCG
Sbjct: 255 PPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCG 314

Query: 317 RPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGEGGVEN 376
           RPETR+HEFRRCSVCG+VNYCSRACQALDWKL+HK +C+P++ W E EG+GG G   ++ 
Sbjct: 315 RPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLE-EGDGGEGNVQIDG 374

[Close]
BLAST of Carg20444 vs. Swiss-Prot
Match: sp|Q9FK27|FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.1e-108
Identity = 204/339 (60.18%), Postives = 247/339 (72.86%), Query Frame = 0 

Query: 35  VSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHSLVLAKASQKTLAI 94
           V++ F+ L DDL+ISIL KL+ +ASSPSDF++ L TCKR N LG H LVL+KA  +TLA+
Sbjct: 18  VNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAV 77

Query: 95  GAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYS 154
            A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI SHAPALYS
Sbjct: 78  TAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYS 137

Query: 155 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRF 214
           L+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV +++ EGRR 
Sbjct: 138 LSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRL 197

Query: 215 LVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTECPLLSDFGCNVPAA 274
           L+QANARELA  L            RS++          ++ S  E   L+D    VP  
Sbjct: 198 LIQANARELACSL------------RSYL----------SLKSGDENETLTDLSV-VPVQ 257

Query: 275 EAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQA 334
           E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQA
Sbjct: 258 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 317

Query: 335 LDWKLQHKAECSPLELWPENEGEGGVGEGGVENENEAED 374
           LDW+ +HK EC+PL+LW     E  +G+ G     E +D
Sbjct: 318 LDWRAKHKVECTPLDLWVAAAAE--IGDDGEAVAVEIDD 331

[Close]
BLAST of Carg20444 vs. Swiss-Prot
Match: sp|Q2YDC9|PDCD2_BOVIN (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.4e-05
Identity = 27/87 (31.03%), Postives = 41/87 (47.13%), Query Frame = 0 

Query: 260 ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRC 319
           + P  +DF    P +E  P+    + +  ++      G  LC   GC  P       +RC
Sbjct: 99  QLPRQNDFYSYEPPSEDPPSETGESVYLHLKS-----GAHLCRVCGCSGP-------KRC 158

Query: 320 SVCGIVNYCSRACQALDWKLQHKAECS 347
           S C   +YCS+  Q+LDW+L HK  C+
Sbjct: 159 SRCHKAHYCSKEHQSLDWRLGHKQACA 173

[Close]
BLAST of Carg20444 vs. Swiss-Prot
Match: sp|Q09415|SET14_CAEEL (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 9.3e-04
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = 0 

Query: 306 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLE 350
           C +  T   E ++CS C  + YCS+ CQ  DWKL HK EC  ++
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIK 68

[Close]
BLAST of Carg20444 vs. TrEMBL
Match: tr|A0A1S3BB38|A0A1S3BB38_CUCME (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 2.3e-172
Identity = 307/359 (85.52%), Postives = 326/359 (90.81%), Query Frame = 0 

Query: 22  KRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHS 81
           KR RF P       SDFF SLPDDLLISILSKL+++ASSPS FI+ALITCKRFN+LGRHS
Sbjct: 16  KRNRFYPK------SDFFDSLPDDLLISILSKLASSASSPSHFINALITCKRFNHLGRHS 75

Query: 82  LVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 141
           LVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMA
Sbjct: 76  LVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 135

Query: 142 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 201
           KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG
Sbjct: 136 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 195

Query: 202 YGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTEC 261
           YGVCQNIMEGRRFLVQANARELAAVLSS ++     A+RSWVTC+P   HR AVGSS+EC
Sbjct: 196 YGVCQNIMEGRRFLVQANARELAAVLSSPSS----AASRSWVTCNPQAIHRTAVGSSSEC 255

Query: 262 PLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSV 321
           PLLSDFGCNVPA EAHPASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSV
Sbjct: 256 PLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSV 315

Query: 322 CGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV--GEGGVENENEAEDVIEES 379
           CGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+ G   GEGG+ NENE EDV+ ES
Sbjct: 316 CGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDGEVDGEGGILNENEDEDVVGES 364

[Close]
BLAST of Carg20444 vs. TrEMBL
Match: tr|A0A0A0LMZ9|A0A0A0LMZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.1e-163
Identity = 288/335 (85.97%), Postives = 307/335 (91.64%), Query Frame = 0 

Query: 23  RRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHSL 82
           R RF P        DFF SLPDDLLISILSKL ++ASSPS FI+ALITCKRFN+LGRHSL
Sbjct: 17  RNRFYPK------FDFFDSLPDDLLISILSKLVSSASSPSHFINALITCKRFNHLGRHSL 76

Query: 83  VLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMAK 142
           VL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAK
Sbjct: 77  VLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAK 136

Query: 143 AAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 202
           AAISS+APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGY
Sbjct: 137 AAISSYAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGY 196

Query: 203 GVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTECP 262
           GVCQNIMEGRRFLVQANARELAAVLSS ++     A+RS VTC+PH  HR AVGSS++CP
Sbjct: 197 GVCQNIMEGRRFLVQANARELAAVLSSPSS----AASRSLVTCNPHAIHRTAVGSSSDCP 256

Query: 263 LLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSVC 322
           LLSDFGCNVPA EAHPASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVC
Sbjct: 257 LLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC 316

Query: 323 GIVNYCSRACQALDWKLQHKAECSPLELWPENEGE 358
           GIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+
Sbjct: 317 GIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD 341

[Close]
BLAST of Carg20444 vs. TrEMBL
Match: tr|A0A067JVI5|A0A067JVI5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17961 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 4.6e-149
Identity = 270/349 (77.36%), Postives = 295/349 (84.53%), Query Frame = 0 

Query: 22  KRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHS 81
           KR+R SP    A  +D F +LPDDL++SIL K+S++AS PSDFI+ LITCKR N LG HS
Sbjct: 40  KRQRLSP--EIAGETDLFDTLPDDLVLSILCKISSSASCPSDFINVLITCKRLNGLGLHS 99

Query: 82  LVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 141
           LVL+KASQKT AI AKNWS+SAHRFLK C DAGNVEACY LGMIRFYCLQNRGSGASLMA
Sbjct: 100 LVLSKASQKTFAIIAKNWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMA 159

Query: 142 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 201
           KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG
Sbjct: 160 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 219

Query: 202 YGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTEC 261
           YGV QN+ EGRRFLVQANARELAAVLS+     +G   R+W+T +PH H    + S   C
Sbjct: 220 YGVRQNVAEGRRFLVQANARELAAVLSNPN---SGLNTRAWLTWNPHAHPNHRLASGPGC 279

Query: 262 PLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSV 321
           PLLSDFGCNVPA EAHPASRFMA+WFA RGG PG GLRLCSHVGCGRPETR+HEFRRCSV
Sbjct: 280 PLLSDFGCNVPAPEAHPASRFMADWFASRGGTPGSGLRLCSHVGCGRPETRKHEFRRCSV 339

Query: 322 CGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGG-VGEGGVENEN 370
           CG VNYCSRACQALDWKL+HK EC+P+E W + EGEGG V  GG  N+N
Sbjct: 340 CGAVNYCSRACQALDWKLRHKEECAPVERWVDEEGEGGDVEAGGEGNQN 383

[Close]
BLAST of Carg20444 vs. TrEMBL
Match: tr|F6HGA6|F6HGA6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0010g03630 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.0e-148
Identity = 273/357 (76.47%), Postives = 301/357 (84.31%), Query Frame = 0 

Query: 22  KRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHS 81
           KR+R +P   SA  SDFF++LPDDL+I ILSKLS++A  PSDFI+ L+TCKRFN LG HS
Sbjct: 37  KRQRLAP--ESAGKSDFFEALPDDLVICILSKLSSSAGCPSDFINVLLTCKRFNGLGLHS 96

Query: 82  LVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 141
           LVL++AS K+LA+ AKNWSESA RFLK C DAGNVEACY LGMIRFYCLQNR SGASLMA
Sbjct: 97  LVLSRASSKSLAVRAKNWSESALRFLKLCADAGNVEACYTLGMIRFYCLQNRVSGASLMA 156

Query: 142 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 201
           KAAISSHAPALYSLAVIQFNGS GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG
Sbjct: 157 KAAISSHAPALYSLAVIQFNGSVGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 216

Query: 202 YGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHRAAVGSSTEC 261
           YGV QN+ EGRRFLVQANARELAAVLSS ++ V   ++RSW+T +PH HHR   GS   C
Sbjct: 217 YGVRQNVAEGRRFLVQANARELAAVLSSASSAV---SSRSWLTWNPHQHHRHVTGSG--C 276

Query: 262 PLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRCSV 321
           PLLSDFGCNVPA EAHPASRF+AEWFA RGG PGPGLRLCSH GCGRPE RRHEFRRCSV
Sbjct: 277 PLLSDFGCNVPAPEAHPASRFLAEWFAARGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSV 336

Query: 322 CGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGEGGVENENEAEDVIEES 379
           CGIVNYCSRACQALDWKL+HKA C+P+E W  ++G+   GEG V      +DVI  S
Sbjct: 337 CGIVNYCSRACQALDWKLRHKAACAPVERWLVDDGDAN-GEGAVAGAAAEDDVIVAS 385

[Close]
BLAST of Carg20444 vs. TrEMBL
Match: tr|A0A061E5E1|A0A061E5E1_THECC (HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=3641 GN=TCM_008826 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.3e-148
Identity = 276/359 (76.88%), Postives = 298/359 (83.01%), Query Frame = 0 

Query: 22  KRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCKRFNNLGRHS 81
           KR+RFSP    A  SD F +LPDDL+ISIL KLS+TA  PSDF++ LITCKR N+L  HS
Sbjct: 35  KRQRFSP--EIARKSDLFDALPDDLVISILCKLSSTARCPSDFVNVLITCKRLNSLALHS 94

Query: 82  LVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQNRGSGASLMA 141
           LVL+KAS K  AI AKNWS+SAHRFLK C DAGNVEA Y LGMIRFYCLQNRGSGASLMA
Sbjct: 95  LVLSKASPKMFAIKAKNWSDSAHRFLKSCADAGNVEAGYTLGMIRFYCLQNRGSGASLMA 154

Query: 142 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 201
           KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG
Sbjct: 155 KAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDG 214

Query: 202 YGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPH--THHRAAVGSST 261
           YGV QNI EGRRFLVQANARELAAVLSSTAA  +    RSW+T  PH   H      +  
Sbjct: 215 YGVRQNIAEGRRFLVQANARELAAVLSSTAA--SNIPTRSWLTWSPHPIPHPNHRHPTVP 274

Query: 262 ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETRRHEFRRC 321
            CPLLSDFGCNVPA EAHPASRF+AEWF+ RGG PGPGLRLCSHVGCGRPETR+HEFRRC
Sbjct: 275 GCPLLSDFGCNVPAPEAHPASRFLAEWFSARGGMPGPGLRLCSHVGCGRPETRKHEFRRC 334

Query: 322 SVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGEGGVENENEAEDVIEES 379
           SVCG VNYCSRACQALDWKL+HKAEC+P+E W + EG+GG G G V+     +DVI ES
Sbjct: 335 SVCGAVNYCSRACQALDWKLRHKAECAPVERWLDEEGDGGEGNGAVDGN---DDVIAES 386

The following BLAST results are available for this feature:
BLAST of Carg20444 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951094.16.0e-217100.00F-box protein At1g67340-like [Cucurbita moschata][more]
XP_023537715.11.7e-21699.74F-box protein At1g67340-like [Cucurbita pepo subsp. pepo][more]
XP_023002802.13.5e-20193.95F-box protein At1g67340-like [Cucurbita maxima][more]
XP_008444448.13.4e-17285.52PREDICTED: F-box protein At1g67340-like [Cucumis melo][more]
XP_004143042.11.7e-16385.97PREDICTED: F-box protein At1g67340-like [Cucumis sativus] >KGN62374.1 hypothetic... [more]
BLAST of Carg20444 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67340.19.1e-13565.76HCP-like superfamily protein with MYND-type zinc finger[more]
AT5G50450.12.2e-10960.18HCP-like superfamily protein with MYND-type zinc finger[more]
AT1G17110.28.8e-0553.13ubiquitin-specific protease 15[more]
AT2G24640.11.5e-0447.50ubiquitin-specific protease 19[more]
AT4G02220.11.5e-0434.62zinc finger (MYND type) family protein / programmed cell death 2 C-terminal doma... [more]
BLAST of Carg20444 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FYF9|FB76_ARATH1.6e-13365.76F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1[more]
sp|Q9FK27|FB342_ARATH4.1e-10860.18F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1[more]
sp|Q2YDC9|PDCD2_BOVIN8.4e-0531.03Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1[more]
sp|Q09415|SET14_CAEEL9.3e-0443.18SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=... [more]
BLAST of Carg20444 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BB38|A0A1S3BB38_CUCME2.3e-17285.52F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1[more]
tr|A0A0A0LMZ9|A0A0A0LMZ9_CUCSA1.1e-16385.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 PE=4 SV=1[more]
tr|A0A067JVI5|A0A067JVI5_JATCU4.6e-14977.36Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17961 PE=4 SV=1[more]
tr|F6HGA6|F6HGA6_VITVI1.0e-14876.47Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0010g03630 PE=4 SV=... [more]
tr|A0A061E5E1|A0A061E5E1_THECC1.3e-14876.88HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=36... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR002893Znf_MYND
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20444-RACarg20444-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 70..242
e-value: 8.4E-18
score: 67.1
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 306..345
e-value: 1.3E-7
score: 31.4
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 303..345
score: 10.911
NoneNo IPR availableGENE3DG3DSA:3.30.60.180coord: 298..348
e-value: 1.4E-10
score: 42.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..378
NoneNo IPR availablePANTHERPTHR12298:SF37SUBFAMILY NOT NAMEDcoord: 33..365
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 33..365
NoneNo IPR availableSUPERFAMILYSSF144232HIT/MYND zinc finger-likecoord: 300..348
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 97..218
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 23..86