Carg20395 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20395
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	chlororespiratory reduction 7
Location	Cucurbita_argyrosperma_scaffold_125 : 143385 .. 144144 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGGCAGCTCTTCACAAGCACTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATGTACGAAATTACCCTTTTCTTTTCTTCTATTTTATTTCCAGATTTTCATTTTTTTTTTTCTCCATTTTTTTTGGAGTACAGTGAGAAGACGAAGAACAGAACAGCAGAACTCAAAATGCTTGTCGGGTGCTTCTTCCTTTCTTCTTCCCAAGCTGCCTACTGCCTCCAAACATCAGCAACGAATCAAGGTTTATCCAATTTCACTGTTTTTATGGCTTTTTTTCTTACCATTTTCAAATGGAAACGAAGTATGCGTTGGATGATAAAAGTCCCACGTCAGCAAATTTAGGGAATGACAGTGGGTTAAAGCCATGAGAGCTTATACTCAAAGCGGATAATATCATACCATTGTGAAGAGTCGTGTTCGTCTAACCGTATGAACTAATTGTTACGAGGGATGTTTAGGTATATGCGAGTAGTAGAAGAAGAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTCGTCTCCAAACAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGAGAAGCTCTTCCACCTGATCTTCAACGCTTTGATTCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

mRNA sequence

ATGGAGAGGGCAGCTCTTCACAAGCACTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATTGAGAAGACGAAGAACAGAACAGCAGAACTCAAAATGCTTGTCGGGTGCTTCTTCCTTTCTTCTTCCCAAGCTGCCTACTGCCTCCAAACATCAGCAACGAATCAAGGTATATGCGAGTAGTAGAAGAAGAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTCGTCTCCAAACAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGAGAAGCTCTTCCACCTGATCTTCAACGCTTTGATTCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

Coding sequence (CDS)

ATGGAGAGGGCAGCTCTTCACAAGCACTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATTGAGAAGACGAAGAACAGAACAGCAGAACTCAAAATGCTTGTCGGGTGCTTCTTCCTTTCTTCTTCCCAAGCTGCCTACTGCCTCCAAACATCAGCAACGAATCAAGGTATATGCGAGTAGTAGAAGAAGAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTCGTCTCCAAACAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGAGAAGCTCTTCCACCTGATCTTCAACGCTTTGATTCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

Protein sequence

MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE

Homology

[Close]

BLAST of Carg20395 vs. NCBI nr
Match: XP_022948390.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 310.1 bits (793), Expect = 4.3e-81
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR 60
           MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR
Sbjct: 1   MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR 60

Query: 61  IKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFD 120
           IKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFD
Sbjct: 61  IKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFD 120

Query: 121 SIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           SIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE
Sbjct: 121 SIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 153

[Close]

BLAST of Carg20395 vs. NCBI nr
Match: XP_023525361.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 8.3e-77
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR 60
           MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR
Sbjct: 1   MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR 60

Query: 61  IKVYASSR-RRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRF 120
           IKVYASSR    ANESSDTYVLLEPGEDEKFVSK+ELEAILKGWLQNWPGEALPPDLQRF
Sbjct: 61  IKVYASSRXXXXANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRF 120

Query: 121 DSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           +SIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE
Sbjct: 121 ESIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154

[Close]

BLAST of Carg20395 vs. NCBI nr
Match: XP_022155024.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Momordica charantia])

HSP 1 Score: 189.9 bits (481), Expect = 6.4e-45
Identity = 103/162 (63.58%), Postives = 118/162 (72.84%), Query Frame = 0


Query: 5   ALHKHFQSFNGIISYSNSTLYPLRRR-------------RTEQQNSKCLSGASSFLLPKL 64
           AL KHF + N I+ YSNS LYP+RR                    SKC  G S+      
Sbjct: 4   ALQKHFHTCNSIL-YSNSILYPVRRELVGXXXXXXXXLGEKRSGGSKCFLGISA------ 63

Query: 65  PTASKHQQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEA 124
            +ASK+QQ+IKV+AS R RR N+SSDTYV+LEPGEDEKFVS++ELEAILKGWLQNW G  
Sbjct: 64  -SASKNQQQIKVHASRRSRRGNQSSDTYVVLEPGEDEKFVSEEELEAILKGWLQNWAG-P 123

Query: 125 LPPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           LPPDL RF+SIEEAVSFL+K VCELEIDGD+GSIQWYQVRLE
Sbjct: 124 LPPDLSRFESIEEAVSFLLKSVCELEIDGDVGSIQWYQVRLE 156

[Close]

BLAST of Carg20395 vs. NCBI nr
Match: XP_022998049.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita maxima])

HSP 1 Score: 186.8 bits (473), Expect = 5.5e-44
Identity = 101/155 (65.16%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 1   MERAALHKHFQSFNGIISYSNSTLYPLR--RRRTEQQNSKCLSGASSFLLPKLPTASKHQ 60
           MERA LHKHFQSFNGIISYSNSTLYPLR                                
Sbjct: 1   MERAGLHKHFQSFNGIISYSNSTLYPLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  QRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQR 120
                             DTYVLLEPGEDEKFVSK ELEAILKGWLQNWPGEALPPDLQR
Sbjct: 61  XXXXXXXXXXXXXXXXXXDTYVLLEPGEDEKFVSKHELEAILKGWLQNWPGEALPPDLQR 120

Query: 121 FDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           F+SIEEAVSFLVKFVCELEIDGDIGSIQWYQV LE
Sbjct: 121 FESIEEAVSFLVKFVCELEIDGDIGSIQWYQVCLE 155

[Close]

BLAST of Carg20395 vs. NCBI nr
Match: XP_008462928.1 (PREDICTED: uncharacterized protein LOC103501190 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43
Identity = 107/159 (67.30%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 5   ALHKHFQSFNGIISYSNSTLY-PLRRRRTEQQN----------SKCLSGASSFLLPKLPT 64
           ALHKH QSFNG +  +NS LY   +  R  +++          SKC  GASS L   LPT
Sbjct: 4   ALHKHLQSFNGTMLSANSKLYWSFKTARAAKRDYKLGESIINVSKCFLGASSRLC-SLPT 63

Query: 65  A-SKH-QQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEA 124
           A SKH QQ+IKVY  SRRRR NESSDTYVLLEPGE+EKFVSKQELE ILK WL+NWP  +
Sbjct: 64  ASSKHQQQQIKVY-GSRRRRVNESSDTYVLLEPGEEEKFVSKQELETILKVWLENWP-TS 123

Query: 125 LPPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQV 151
           LPPDL RF SIEEAVSFLVK VCELEIDGD+GSIQWYQ+
Sbjct: 124 LPPDLSRFQSIEEAVSFLVKSVCELEIDGDVGSIQWYQM 159

[Close]

BLAST of Carg20395 vs. TAIR10
Match: AT5G39210.1 (chlororespiratory reduction 7)

HSP 1 Score: 137.5 bits (345), Expect = 6.9e-33
Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 53  TASKHQQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEAL 112
           T+ K +    V A +RRRR + +SDTYVLLE G+DE+FV++ EL+A L+GWL+NWP  +L
Sbjct: 57  TSRKSKSHFSVCA-TRRRRVHSNSDTYVLLEAGQDEQFVTEDELKAKLRGWLENWPVNSL 116

Query: 113 PPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           PPDL RFD ++EAV FLVK VCELEIDG++GS+QWYQVRLE
Sbjct: 117 PPDLARFDDLDEAVDFLVKAVCELEIDGEVGSVQWYQVRLE 156

[Close]

BLAST of Carg20395 vs. Swiss-Prot
Match: sp|Q9FL87|CRR7_ARATH (Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR7 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31
Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 53  TASKHQQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEAL 112
           T+ K +    V A +RRRR + +SDTYVLLE G+DE+FV++ EL+A L+GWL+NWP  +L
Sbjct: 57  TSRKSKSHFSVCA-TRRRRVHSNSDTYVLLEAGQDEQFVTEDELKAKLRGWLENWPVNSL 116

Query: 113 PPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           PPDL RFD ++EAV FLVK VCELEIDG++GS+QWYQVRLE
Sbjct: 117 PPDLARFDDLDEAVDFLVKAVCELEIDGEVGSVQWYQVRLE 156

[Close]

BLAST of Carg20395 vs. TrEMBL
Match: tr|A0A1S3CI19|A0A1S3CI19_CUCME (uncharacterized protein LOC103501190 OS=Cucumis melo OX=3656 GN=LOC103501190 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-43
Identity = 107/159 (67.30%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 5   ALHKHFQSFNGIISYSNSTLY-PLRRRRTEQQN----------SKCLSGASSFLLPKLPT 64
           ALHKH QSFNG +  +NS LY   +  R  +++          SKC  GASS L   LPT
Sbjct: 4   ALHKHLQSFNGTMLSANSKLYWSFKTARAAKRDYKLGESIINVSKCFLGASSRLC-SLPT 63

Query: 65  A-SKH-QQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEA 124
           A SKH QQ+IKVY  SRRRR NESSDTYVLLEPGE+EKFVSKQELE ILK WL+NWP  +
Sbjct: 64  ASSKHQQQQIKVY-GSRRRRVNESSDTYVLLEPGEEEKFVSKQELETILKVWLENWP-TS 123

Query: 125 LPPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQV 151
           LPPDL RF SIEEAVSFLVK VCELEIDGD+GSIQWYQ+
Sbjct: 124 LPPDLSRFQSIEEAVSFLVKSVCELEIDGDVGSIQWYQM 159

[Close]

BLAST of Carg20395 vs. TrEMBL
Match: tr|A0A0A0KZ70|A0A0A0KZ70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101280 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.0e-43
Identity = 102/161 (63.35%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 5   ALHKHFQSFNGIISYSNSTLY-PLRRRRTEQQN----------SKCLSGASSFLLPKLPT 64
           ALH+HFQSFNG I YSN  LY   +R R  +Q+          SKC    +S LL +L T
Sbjct: 4   ALHRHFQSFNGTILYSNFQLYCSFKRARAAKQHHKLGESRINVSKCFFLGASSLLCRLST 63

Query: 65  A-SKHQQRIKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEAL 124
           +       IKV+  SRRRR NESSDTYVLLEPGE+EKFVSKQELE ILKGWL+NWP   L
Sbjct: 64  SXXXXXXXIKVF-GSRRRRINESSDTYVLLEPGEEEKFVSKQELETILKGWLENWP-TPL 123

Query: 125 PPDLQRFDSIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           PPDL RF SIEEAV+FLVK VCELEIDGD+GSIQWY+VR++
Sbjct: 124 PPDLSRFQSIEEAVTFLVKSVCELEIDGDVGSIQWYEVRID 162

[Close]

BLAST of Carg20395 vs. TrEMBL
Match: tr|A0A0F7H0K6|A0A0F7H0K6_9ROSI (Chlororespiratory reduction 7 OS=Melianthus villosus OX=377280 GN=CRR7 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 79/153 (51.63%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 1   MERAALHKHFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSFLLPKLPTASKHQQR 60
           +E+  L+   + FN         L P+  R  E  N    S  SS  L K+P    H + 
Sbjct: 8   LEKHLLNNGVEYFNCKTKSIYHILSPINPRLYECSNGYLSS--SSVHLMKMPEIVGHYRS 67

Query: 61  IKVYASSRRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFD 120
                + RRRR+N  ++TYVLLEPGEDEKFVS++EL   LKGWL+NWPG+ LPPDL R+ 
Sbjct: 68  AVKICAIRRRRSNSRTETYVLLEPGEDEKFVSEEELRLKLKGWLENWPGKVLPPDLARYA 127

Query: 121 SIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE 154
           +IE+AVS+LV+ VCELEIDGD+GSIQWY+VRLE
Sbjct: 128 TIEDAVSYLVRSVCELEIDGDVGSIQWYEVRLE 158

[Close]

BLAST of Carg20395 vs. TrEMBL
Match: tr|A0A2P5W027|A0A2P5W027_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36271 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33
Identity = 79/146 (54.11%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 9   HFQSFNGIISYSNSTLYPLRRRRTEQQNSKCLS-GASSFLLPKLPTASKHQQRIKVYASS 68
           HF   +  +  S+ TL P       Q N  C S   S+  +  L   S+H+  +KV A+ 
Sbjct: 599 HFVQLDNFL--SSYTLTPF-----VQANPVCRSENFSTVHVKHLKIGSQHRNAVKVCATR 658

Query: 69  RRRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFDSIEEAVS 128
           RRR A   ++TYVLLEPGEDEKFVS++EL+A LKGWL+NWPG+ LP DL RF++I++AVS
Sbjct: 659 RRRAAYSRTETYVLLEPGEDEKFVSEEELKAKLKGWLENWPGKNLPLDLARFEAIDDAVS 718

Query: 129 FLVKFVCELEIDGDIGSIQWYQVRLE 154
           +LV+ VCELEIDGD+GSIQWY+VRLE
Sbjct: 719 YLVRSVCELEIDGDVGSIQWYEVRLE 737

[Close]

BLAST of Carg20395 vs. TrEMBL
Match: tr|A0A0A8XND0|A0A0A8XND0_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33
Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 12  SFNGIISYSNSTLYPLRRRRTEQQNSKCLSGASSF---LLPKLPTASKHQQRIKVYASSR 71
           S  G+++ +  +L   RR     Q +   +GA+SF    L + P   +H  ++     +R
Sbjct: 18  STGGLLTGTRRSLLHHRR----SQRATFSAGAASFPTTSLKRPPRTHRHGTKV---CEAR 77

Query: 72  RRRANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFDSIEEAVSF 131
           RRRA+  SDTYVL+EPG DE+FVS++ELEA LKGWL+NWPG+ALPPDL +FD++++AVS+
Sbjct: 78  RRRADIQSDTYVLMEPGADEEFVSREELEARLKGWLENWPGDALPPDLAKFDTVDDAVSY 137

Query: 132 LVKFVCELEIDGDIGSIQWYQVRLE 154
           LV+ VCELEIDG++GS+QWYQV LE
Sbjct: 138 LVRSVCELEIDGEVGSVQWYQVELE 155

The following BLAST results are available for this feature:

BLAST of Carg20395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948390.1	4.3e-81	100.00	protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita moschata]	[more]
XP_023525361.1	8.3e-77	96.10	protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita pepo subsp. pepo...	[more]
XP_022155024.1	6.4e-45	63.58	protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Momordica charantia]	[more]
XP_022998049.1	5.5e-44	65.16	protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita maxima]	[more]
XP_008462928.1	3.5e-43	67.30	PREDICTED: uncharacterized protein LOC103501190 [Cucumis melo]	[more]

BLAST of Carg20395 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39210.1	6.9e-33	63.37	chlororespiratory reduction 7	[more]

BLAST of Carg20395 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FL87\|CRR7_ARATH	1.2e-31	63.37	Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg20395 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CI19\|A0A1S3CI19_CUCME	2.3e-43	67.30	uncharacterized protein LOC103501190 OS=Cucumis melo OX=3656 GN=LOC103501190 PE=...	[more]
tr\|A0A0A0KZ70\|A0A0A0KZ70_CUCSA	4.0e-43	63.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101280 PE=4 SV=1	[more]
tr\|A0A0F7H0K6\|A0A0F7H0K6_9ROSI	3.7e-33	51.63	Chlororespiratory reduction 7 OS=Melianthus villosus OX=377280 GN=CRR7 PE=2 SV=1	[more]
tr\|A0A2P5W027\|A0A2P5W027_GOSBA	4.9e-33	54.11	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36271 PE=4 SV...	[more]
tr\|A0A0A8XND0\|A0A0A8XND0_ARUDO	4.9e-33	51.72	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038150	CRR7-like_sf
IPR021954	CRR7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20395-RA	Carg20395-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021954	Protein CHLORORESPIRATORY REDUCTION 7	PFAM	PF12095	CRR7	coord: 75..153 e-value: 6.0E-27 score: 93.8
IPR021954	Protein CHLORORESPIRATORY REDUCTION 7	PANTHER	PTHR36803	FAMILY NOT NAMED	coord: 35..153
IPR038150	Protein CHLORORESPIRATORY REDUCTION 7-like superfamily	GENE3D	G3DSA:3.90.940.40		coord: 78..150 e-value: 2.2E-27 score: 97.1
None	No IPR available	PANTHER	PTHR36803:SF1	PROTEIN CHLORORESPIRATORY REDUCTION 7, CHLOROPLASTIC	coord: 35..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20395	Cla010785	Watermelon (97103) v1	carwmB0697
Carg20395	ClCG07G016310	Watermelon (Charleston Gray)	carwcgB0678
Carg20395	CmaCh01G004460	Cucurbita maxima (Rimu)	carcmaB0982
Carg20395	CmoCh01G004790	Cucurbita moschata (Rifu)	carcmoB0954
Carg20395	Lsi07G009910	Bottle gourd (USVL1VR-Ls)	carlsiB640
Carg20395	Cp4.1LG02g14050	Cucurbita pepo (Zucchini)	carcpeB0982
Carg20395	Cla97C07G143270	Watermelon (97103) v2	carwmbB0731

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20395	Wax gourd	carwgoB0823
Carg20395	Silver-seed gourd	carcarB580
Carg20395	Cucumber (Gy14) v1	carcgyB0783
Carg20395	Cucurbita maxima (Rimu)	carcmaB0980
Carg20395	Cucurbita moschata (Rifu)	carcmoB0953
Carg20395	Cucurbita pepo (Zucchini)	carcpeB0983
Carg20395	Melon (DHL92) v3.5.1	carmeB0699
Carg20395	Melon (DHL92) v3.6.1	carmedB0712