Carg20348 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20348
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Spermidine synthase
Location	Cucurbita_argyrosperma_scaffold_178 : 201073 .. 204755 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTTCACTCTAATGCTCGTGTCATTTCCTAACCCTGCAGATTTTAAGGAAAAAAACAAAAACAAAATTTGGATGTTTGAACACCTTTTAGAGCTATAATTAAGCATGAAACTATTGAAGGAAGGACGGAAGGAAGTATTTGGATTTCGCGTATTTTATTGGTCGGTGTGTGTAAGATAGTGATACACGCTTTCTTATTTTGTCCCTTTATGGTTTGTGGTCTTTGTGTTCCATCTTTATTTTCTTGTTGAACCGACTCATAAACAATGGTTCATGCTCGGTATGCTGCGGAAACTGAAAGAACGTGGGGAATCTGAACTTCTTTTTCATTTTAAAAATAAACTTCTCTCATCTTCTTGGACCTTAAAATCCAGTTGAGCTACCTGAATTAATAGAAGGTTCATCATGAACAGTCTGGCTTATGGAAATAGTTCTACTCTGTTTGTACCATTATAGTATATCCTTGATTCCACTTCTGAGGTTTACCATGACTTTCATGAGTTCTTTTTTTATACCTATTCTCCATAGGGGTCTGAAGCTCTCTATTCCGATGGATTTCAGTCATATCATTTGCTTATCTTTCTTGATCTGGCTTTGTGAAACTTTATCCCTTGTTCGTGTCACCTTACATGATCTTATAGTAAATTCCAAACCTGGTAGAACTCTAAAAAGTTAACGAGAGAGATCATTTTTTTCAGTTTTTTTTTTTTTTTTTTTCTGTGATCAAAAGCTTTGCATTGTACACTGGAAAAAGCTGCGTGACTGTGCTTATTGAGTTGTGATCTAAGTTACTGTAAATCCACTTCCTATACAACTTGCTGATGCTTATTTGTTTCTGCTGATGATTATTCCTCGATCTTATTTTGATGGGATTTCTTGTTATACATTTTGTATTTTCTTGATGGTATTTAACAAAGCATGTTAGTGGGTGACATGTATTTGTCCAAAAGCCAAAAAACTTATATATCATAACGAAGCTATAGGTTCGATAATTTCATTTGTCCACTGGTGACTTCAATTTCTTCCTTGGAAATCTTGAATCTGCAGAAAGTAAAGATGCAAATGCTTACAAAATGTATAATCTATTACTTTCCCACGACTTATGTATGGTAGAAGAGCATGAGTCACTCAAAAGATGTCTCTTGTATACATATCTTCTTTCTCCATCTTTATGATGATGTGCTATTCTTGATGTTCCAGAGGCTGGAGACTGAACAAAAAACGATAATACATGGAGGACGTCACAGGAAGAAGTTTGGAATGCCAGACAATTATGGATGATGGGAAGGCGACTAACGGGAATGGCTTAGATAAGGCCATTCCTTCTTGTTGTTTGAAGGCTAAGGCGTCAGATCCTGAGCTTGAGGCTCAATGCCATTCAACTGTTGTTTCTGGCTGGATTTCAGAATTTCAGTCTGGCTCTGGTCATTCTCCTTTTCTTTAATCTCCTCGTGAAGCTCTTGGTTCTGTTTTAGAAACCGTGGCTCACCATGTGGGTAATTAACATCAGTTGCGCTCGTTTCCTTTGCAGATAAAGCTAGCAAGTTTGTTTATTTCAACAACCCAATGTGGCCGGGTGAGTGCTTTTCTTGTATTTCTTGTTAATGGTCTCTTTTTCATGCTGAGGGAGTTCATTTTACTTTCATTCTTTACTAGGAGTTGAATGTTCATATAAACGCTCACGACTTTCTGCAACATCAAAACTTTTTGACGTATATTTGATTGCACTAGTGTTACATAAGCCACACGTCAAATGTCTGCAAATGTCTGCATTTGACAAGCTAATGTTATTATTGTCAACCTTTCAGGAGAAGCACATTCTCTGCAAGTAGAGAATATACTATTTAAAGGAAAGTCAGAGTACCAAGAGGTCATGGTTTTTGAGGTACCATTCGCTGAGACAATGTTTTTACCTTCGCAATTCATTTGCTTGGTTTCTTGAGATTAATACTTTACTTGTTTGTCTCTATTTGTTTACAGTCTGCATCATATGGAAAAGTCCTTGTTCTTGATGGCATTGTTCAACTGACAGAGAAAGATGAATGTGCCTACCAGGAAATGATAGCGCATCTTCCTCTTTGTTCGATCCCGTCTCCTAAAACCGTTAGTCCTCCCAAAAATTTGTTTCTGTGCCAATTTCATCTCTTATTAAGAAAATTTCTTTTTCTCTTCCAACTTTTGCATAATTTTAAGACATAAAATGACCCTATTTAGGTTCTGGTTGTTGGCGGAGGTGATGGCGGAGTCCTGAGGGAAATTTCTCGTCACGACTCAGTGGAGCACATCGACATTTGTGAGATAGATGAGATGGTCATTAATGTAAGTGTTCATTAGAGACATGTTGCGAATTGCATGATAAGTTCATAATGAAACAACTTGCTGCTGTGGTATGTTTCAAGATTGTGACCTAATGCTTCATTTCCCTGCTTTCTTAATTCGTAGGTGTCAAAACAATTTTTCCCCCAACTAGCTGTTGGATTCGAGGACCCTCGTGTTCACCTTCATGTTGGTGATGGTGCGTCGAAAGTCGAGACATCTTATTCCTTTTTTTGTTTCTTATGCTATTTCCTATATAATTTGCATCTTTGTAATGTCAGCTGTTGAATTTCTTCGGAATGCAAAGCAAGGGAAGTATGATGCCGTCATTGTTGATTCCTCTGATCCTGTGGGTAAGTTAATGATTTGTAACAGAGAAGAATAAAAAAAAAAAAAAAAATGGTGCAACAATGCAAGCTACATATCTTTTCGTTCAACGATTAGAACCTTAAATTTATGTTCTCTTTCGAAAGACTTGTGCTCGTAAACTCATCTTCTAACCGGGGGTTCTTGTAATAAAGGTCCTGCCCAAGAACTGGTGGAGATGCCATTTTTTCAGACGATAGCCCGAGCATTGCGACCCGGTGGTGTTCTCTGTAACATGGCTGAAAGTATGTGGCTGCATACACATCTCATTCAGGACATGATATCAATATGTCGCCAAACATTCAAGGATGTTCACTATGCCTGGACCAGTGTTCCAACATATCCAAGTGGTGTTATAGGGTTTCTACTCTGCTCAACTGAAGGGCCAACAGTTGATTTTAGGAACCCTGTGAATCCCATTGAGAAGTTAGGACATCTCAAGTCAAAAAGAGAACTCAAATTCTACAACTCTGAGGTAACCACACAAAAGCTCTTTAACTTAACTAAGATTCGATACAATGTCGATGTAGAGATACATCCATCAACACACTATATGGATTAAAACTTCGATTACACCGTGCGTTGATACTAATAATGGTTGACATTCCAACAGATGCACTTGGCTGCATTTGCGCTGCCATCGTTTCTCAAGAGCGAGGTGAAGGCACTTAGTGATGCTTCAGCTTCACTTAAAAAGGGAAGCATTTCATCCTAAGTTGGTGACTGTTTGAAATGCTTCTTCCAAGGTGGTGAAGGGCACTAGTGTTGAGTGTATACATAAAATTATTGGAGTGGCTGAAACATCTCTACTGTGTGCTGAGGGAGGGCATCGTTAATGATATATTATTTAACAAGTTCAGGTTTGTTATCCTAGTAGAAGATAAGTGTTTAGCTGTTTTTGTTGTTTTTCCATGGCTGATTGGTATGCCAATTAGCCGATAAATAAAGAAAAACAAGAAAGAAACCACTTCCTAATTAATAAAAATGGGGAATTTATATA

mRNA sequence

TCTGTTCACTCTAATGCTCGTGTCATTTCCTAACCCTGCAGATTTTAAGGAAAAAAACAAAAACAAAATTTGGATGTTTGAACACCTTTTAGAGCTATAATTAAGCATGAAACTATTGAAGGAAGGACGGAAGGAAGTATTTGGATTTCGCGTATTTTATTGGTCGGTGTGTGTAAGATAGTGATACACGCTTTCTTATTTTGTCCCTTTATGGTTTGTGGTCTTTGTGTTCCATCTTTATTTTCTTGTTGAACCGACTCATAAACAATGGTTCATGCTCGGTATGCTGCGGAAACTGAAAGAACGTGGGGAATCTGAACTTCTTTTTCATTTTAAAAATAAACTTCTCTCATCTTCTTGGACCTTAAAATCCAGTTGAGCTACCTGAATTAATAGAAGAGGCTGGAGACTGAACAAAAAACGATAATACATGGAGGACGTCACAGGAAGAAGTTTGGAATGCCAGACAATTATGGATGATGGGAAGGCGACTAACGGGAATGGCTTAGATAAGGCCATTCCTTCTTGTTGTTTGAAGGCTAAGGCGTCAGATCCTGAGCTTGAGGCTCAATGCCATTCAACTGTTGTTTCTGGCTGGATTTCAGAATTTCAGTCTGGCTCTGATAAAGCTAGCAAGTTTGTTTATTTCAACAACCCAATGTGGCCGGGAGAAGCACATTCTCTGCAAGTAGAGAATATACTATTTAAAGGAAAGTCAGAGTACCAAGAGGTCATGGTTTTTGAGTCTGCATCATATGGAAAAGTCCTTGTTCTTGATGGCATTGTTCAACTGACAGAGAAAGATGAATGTGCCTACCAGGAAATGATAGCGCATCTTCCTCTTTGTTCGATCCCGTCTCCTAAAACCGTTCTGGTTGTTGGCGGAGGTGATGGCGGAGTCCTGAGGGAAATTTCTCGTCACGACTCAGTGGAGCACATCGACATTTGTGAGATAGATGAGATGGTCATTAATGTGTCAAAACAATTTTTCCCCCAACTAGCTGTTGGATTCGAGGACCCTCGTGTTCACCTTCATGTTGGTGATGCTGTTGAATTTCTTCGGAATGCAAAGCAAGGGAAGTATGATGCCGTCATTGTTGATTCCTCTGATCCTGTGGGTCCTGCCCAAGAACTGGTGGAGATGCCATTTTTTCAGACGATAGCCCGAGCATTGCGACCCGGTGGTGTTCTCTGTAACATGGCTGAAAGTATGTGGCTGCATACACATCTCATTCAGGACATGATATCAATATGTCGCCAAACATTCAAGGATGTTCACTATGCCTGGACCAGTGTTCCAACATATCCAAGTGGTGTTATAGGGTTTCTACTCTGCTCAACTGAAGGGCCAACAGTTGATTTTAGGAACCCTGTGAATCCCATTGAGAAGTTAGGACATCTCAAGTCAAAAAGAGAACTCAAATTCTACAACTCTGAGATGCACTTGGCTGCATTTGCGCTGCCATCGTTTCTCAAGAGCGAGGTGAAGGCACTTAGTGATGCTTCAGCTTCACTTAAAAAGGGAAGCATTTCATCCTAAGTTGGTGACTGTTTGAAATGCTTCTTCCAAGGTGGTGAAGGGCACTAGTGTTGAGTGTATACATAAAATTATTGGAGTGGCTGAAACATCTCTACTGTGTGCTGAGGGAGGGCATCGTTAATGATATATTATTTAACAAGTTCAGGTTTGTTATCCTAGTAGAAGATAAGTGTTTAGCTGTTTTTGTTGTTTTTCCATGGCTGATTGGTATGCCAATTAGCCGATAAATAAAGAAAAACAAGAAAGAAACCACTTCCTAATTAATAAAAATGGGGAATTTATATA

Coding sequence (CDS)

ATGGAGGACGTCACAGGAAGAAGTTTGGAATGCCAGACAATTATGGATGATGGGAAGGCGACTAACGGGAATGGCTTAGATAAGGCCATTCCTTCTTGTTGTTTGAAGGCTAAGGCGTCAGATCCTGAGCTTGAGGCTCAATGCCATTCAACTGTTGTTTCTGGCTGGATTTCAGAATTTCAGTCTGGCTCTGATAAAGCTAGCAAGTTTGTTTATTTCAACAACCCAATGTGGCCGGGAGAAGCACATTCTCTGCAAGTAGAGAATATACTATTTAAAGGAAAGTCAGAGTACCAAGAGGTCATGGTTTTTGAGTCTGCATCATATGGAAAAGTCCTTGTTCTTGATGGCATTGTTCAACTGACAGAGAAAGATGAATGTGCCTACCAGGAAATGATAGCGCATCTTCCTCTTTGTTCGATCCCGTCTCCTAAAACCGTTCTGGTTGTTGGCGGAGGTGATGGCGGAGTCCTGAGGGAAATTTCTCGTCACGACTCAGTGGAGCACATCGACATTTGTGAGATAGATGAGATGGTCATTAATGTGTCAAAACAATTTTTCCCCCAACTAGCTGTTGGATTCGAGGACCCTCGTGTTCACCTTCATGTTGGTGATGCTGTTGAATTTCTTCGGAATGCAAAGCAAGGGAAGTATGATGCCGTCATTGTTGATTCCTCTGATCCTGTGGGTCCTGCCCAAGAACTGGTGGAGATGCCATTTTTTCAGACGATAGCCCGAGCATTGCGACCCGGTGGTGTTCTCTGTAACATGGCTGAAAGTATGTGGCTGCATACACATCTCATTCAGGACATGATATCAATATGTCGCCAAACATTCAAGGATGTTCACTATGCCTGGACCAGTGTTCCAACATATCCAAGTGGTGTTATAGGGTTTCTACTCTGCTCAACTGAAGGGCCAACAGTTGATTTTAGGAACCCTGTGAATCCCATTGAGAAGTTAGGACATCTCAAGTCAAAAAGAGAACTCAAATTCTACAACTCTGAGATGCACTTGGCTGCATTTGCGCTGCCATCGTTTCTCAAGAGCGAGGTGAAGGCACTTAGTGATGCTTCAGCTTCACTTAAAAAGGGAAGCATTTCATCCTAA

Protein sequence

MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASASLKKGSISS

Homology

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BLAST of Carg20348 vs. NCBI nr
Match: XP_022944858.1 (spermine synthase-like [Cucurbita moschata])

HSP 1 Score: 742.3 bits (1915), Expect = 8.1e-211
Identity = 367/369 (99.46%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDVTGRSLECQTIM DGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF
Sbjct: 1   MEDVTGRSLECQTIM-DGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIP PKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPFPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF
Sbjct: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360
           LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA
Sbjct: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360

Query: 361 SLKKGSISS 370
           SLKKGSISS
Sbjct: 361 SLKKGSISS 368

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BLAST of Carg20348 vs. NCBI nr
Match: XP_022968621.1 (spermine synthase-like [Cucurbita maxima])

HSP 1 Score: 736.5 bits (1900), Expect = 4.5e-209
Identity = 363/369 (98.37%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDVTGRS ECQTIM DGK TNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF
Sbjct: 1   MEDVTGRSFECQTIM-DGKTTNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           Q GSDKASKFVYFNNPMWPGEAHSL VENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QPGSDKASKFVYFNNPMWPGEAHSLLVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDA+IVDSSDPVGPAQELVEMPF
Sbjct: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAIIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360
           LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA
Sbjct: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360

Query: 361 SLKKGSISS 370
           SLKKGSISS
Sbjct: 361 SLKKGSISS 368

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BLAST of Carg20348 vs. NCBI nr
Match: XP_023542101.1 (spermine synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.9 bits (1896), Expect = 1.3e-208
Identity = 363/369 (98.37%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDVTGRSLECQTIM DGKATNGNGLDK IPSCCLKAKASDPELEAQCHSTVVSGWISEF
Sbjct: 1   MEDVTGRSLECQTIM-DGKATNGNGLDKPIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QSGSDKASKFVYFNNPMWPGEAHSLQVE ILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVEKILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF
Sbjct: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           FQ IARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FQMIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360
           LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA
Sbjct: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360

Query: 361 SLKKGSISS 370
           S +KGSISS
Sbjct: 361 SFEKGSISS 368

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BLAST of Carg20348 vs. NCBI nr
Match: XP_022141267.1 (spermine synthase-like [Momordica charantia])

HSP 1 Score: 693.7 bits (1789), Expect = 3.3e-196
Identity = 345/371 (92.99%), Postives = 352/371 (94.88%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDV GRSLECQ IM DGKATNGNGLD AIPSCCLKAK SDPELEAQCHSTVVSGW SEF
Sbjct: 1   MEDVAGRSLECQKIM-DGKATNGNGLDGAIPSCCLKAKTSDPELEAQCHSTVVSGWFSEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QSGSDKASK VYFNNPMWPGEAH+LQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QSGSDKASKNVYFNNPMWPGEAHALQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEID+MVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDKMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+FFPQLAVGFEDPRVHLHVGDAVEFLRNA+QGKYDA+IVDSSDPVGPAQELVEMPF
Sbjct: 181 DVSKKFFPQLAVGFEDPRVHLHVGDAVEFLRNARQGKYDAIIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           FQTIARALR GGVLCNMAESMWLHTHLIQDMISICR+TFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FQTIARALRSGGVLCNMAESMWLHTHLIQDMISICRETFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKL--GHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDA 360
           LCSTEGPTVDFRNPVNPIE L   HLKSKRELKFYNSEMH AAFALPSFLK EVKALSDA
Sbjct: 301 LCSTEGPTVDFRNPVNPIENLVGQHLKSKRELKFYNSEMHSAAFALPSFLKREVKALSDA 360

Query: 361 SASLKKGSISS 370
             S K G ISS
Sbjct: 361 PVSGKNGWISS 370

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BLAST of Carg20348 vs. NCBI nr
Match: XP_004150312.1 (PREDICTED: spermine synthase-like [Cucumis sativus] >KGN58277.1 hypothetical protein Csa_3G604620 [Cucumis sativus])

HSP 1 Score: 679.5 bits (1752), Expect = 6.5e-192
Identity = 332/369 (89.97%), Postives = 347/369 (94.04%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDVTG+SLECQ IM DGK TNGNG +K IPSCCLKAK SDPELEAQCHSTVVSGW SEF
Sbjct: 1   MEDVTGKSLECQKIM-DGKVTNGNGREKVIPSCCLKAKTSDPELEAQCHSTVVSGWFSEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QSGSDKA K +YFNNPMWPGEAH+L+VENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QSGSDKACKKLYFNNPMWPGEAHALEVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPK+VLVVGGGDGGVLREISRHDSVEHIDICEID+MVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKSVLVVGGGDGGVLREISRHDSVEHIDICEIDQMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+ FPQLAVGFEDPRVHLHVGDAVEFLRN KQGKYDA+IVDSSDPVGPAQELVEMPF
Sbjct: 181 DVSKKCFPQLAVGFEDPRVHLHVGDAVEFLRNGKQGKYDAIIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           F+ IA+ALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FRMIAQALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360
           LCSTEGP VDF NPVNPIE +GH KSKRELKFYNSEMH AAFALPSFLK EV+AL+DA A
Sbjct: 301 LCSTEGPKVDFSNPVNPIENVGHPKSKRELKFYNSEMHSAAFALPSFLKREVQALNDAPA 360

Query: 361 SLKKGSISS 370
           S K G ISS
Sbjct: 361 SGKNGCISS 368

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BLAST of Carg20348 vs. TAIR10
Match: AT5G53120.6 (spermidine synthase 3)

HSP 1 Score: 558.5 bits (1438), Expect = 3.0e-159
Identity = 277/384 (72.14%), Postives = 310/384 (80.73%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISE- 60
           ME   G  L CQ  M DGKA+NGNGL+K +PSCCLKA A  PE +A+CHSTVVSGW SE 
Sbjct: 1   MEGDVGIGLVCQNTM-DGKASNGNGLEKTVPSCCLKAMACVPEDDAKCHSTVVSGWFSEP 60

Query: 61  FQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIV 120
                 K  K VYFNNPMWPGEAHSL+VE +LFK KS++QEV+VFESA+YGKVLVLDGIV
Sbjct: 61  HPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIV 120

Query: 121 QLTEKDECAYQEMIAHLPLCSIPSPKT---------------------------VLVVGG 180
           QLTEKDECAYQEMIAHLPLCSI SPK                            VLVVGG
Sbjct: 121 QLTEKDECAYQEMIAHLPLCSISSPKNVISHLKKFSLSGFLYLVACCNKSVNLKVLVVGG 180

Query: 181 GDGGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRN 240
           GDGGVLREISRH SVE IDICEID+MVI+VSK+FFP+LAVGF+DPRV LH+GDA EFLR 
Sbjct: 181 GDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRK 240

Query: 241 AKQGKYDAVIVDSSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMI 300
           + +GKYDA+IVDSSDPVGPA  LVE PFF+T+ARAL+PGGVLCNMAESMWLHTHLI+DMI
Sbjct: 241 SPEGKYDAIIVDSSDPVGPALALVEKPFFETLARALKPGGVLCNMAESMWLHTHLIEDMI 300

Query: 301 SICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKL-GHLKSKRELK 356
           SICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIEKL G +  KRELK
Sbjct: 301 SICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRELK 360

[Close]

BLAST of Carg20348 vs. TAIR10
Match: AT1G23820.1 (spermidine synthase 1)

HSP 1 Score: 447.2 bits (1149), Expect = 9.8e-126
Identity = 206/321 (64.17%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 35  LKAKASDPELEAQCHSTVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKG 94
           ++ +  D + E  C STV+ GW SE               +PMWPGEAHSL+VE +LF+G
Sbjct: 70  METENGDQKKEPACFSTVIPGWFSEM--------------SPMWPGEAHSLKVEKVLFQG 129

Query: 95  KSEYQEVMVFESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGD 154
           KS+YQ+V+VF+SA+YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGD
Sbjct: 130 KSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGD 189

Query: 155 GGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAK 214
           GGVLRE++RH S+E ID+CEID+MV++VSKQFFP +A+G+EDPRV+L +GD V FL+NA 
Sbjct: 190 GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA 249

Query: 215 QGKYDAVIVDSSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISI 274
           +G YDAVIVDSSDP+GPA+EL E PFFQ++ARALRPGGV+C  AES+WLH  +I+D++S 
Sbjct: 250 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSN 309

Query: 275 CRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFY 334
           CR+ FK  V+YAWTSVPTYPSGVIGF+LCSTEGP VDF++P+NPI++    KS   LKFY
Sbjct: 310 CREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDE-SSSKSNGPLKFY 369

Query: 335 NSEMHLAAFALPSFLKSEVKA 355
           N+E+H AAF LPSF K  +++
Sbjct: 370 NAEIHSAAFCLPSFAKKVIES 375

[Close]

BLAST of Carg20348 vs. TAIR10
Match: AT1G70310.1 (spermidine synthase 2)

HSP 1 Score: 426.4 bits (1095), Expect = 1.8e-119
Identity = 199/310 (64.19%), Postives = 250/310 (80.65%), Query Frame = 0


Query: 45  EAQCHSTVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVF 104
           E  C S+++ GW SE               +PMWPGEAHSL+VE ILF+GKS+YQ+V+VF
Sbjct: 40  EPSCMSSIIPGWFSEI--------------SPMWPGEAHSLKVEKILFQGKSDYQDVIVF 99

Query: 105 ESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH 164
           +SA+YGKVLVLDG++QLTE+DECAYQEMI HLPLCSI +PK VLV+GGGDGGVLRE++RH
Sbjct: 100 QSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARH 159

Query: 165 DSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVD 224
            SVE IDICEID+MV++V+KQ+FP +AVG+EDPRV+L +GD V FL+NA +G YDAVIVD
Sbjct: 160 SSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVD 219

Query: 225 SSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVH 284
           SSDP+GPA+EL E PFF+++ RALRPGGV+C  AES+WLH  +I+D++S CR  FK  V+
Sbjct: 220 SSDPIGPAKELFEKPFFESVNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVN 279

Query: 285 YAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIE-KLGHLKSKRELKFYNSEMHLAAF 344
           YAWTSVPTYPSGVIGF+LCS+EGP VDF+ PV+ I+     +KS   LK+YN+E+H AAF
Sbjct: 280 YAWTSVPTYPSGVIGFMLCSSEGPQVDFKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAF 335

Query: 345 ALPSFLKSEV 353
            LPSF K  +
Sbjct: 340 CLPSFAKKVI 335

[Close]

BLAST of Carg20348 vs. TAIR10
Match: AT5G19530.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 6.3e-32
Identity = 84/291 (28.87%), Postives = 153/291 (52.58%), Query Frame = 0


Query: 84  SLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPS 143
           S  + ++L +G SEYQ++ + ++  +GKVLV+DG +Q  E+DE  Y E + H  L   P+
Sbjct: 47  SFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHECLIHPALLFHPN 106

Query: 144 PKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHV 203
           PKTV ++GGG+G   REI +H ++E + +C+ID+ V++  ++F    +  F + ++ L +
Sbjct: 107 PKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSDAFCNKKLELVI 166

Query: 204 GDAVEFLRNAKQGKYDAVIVDSSDPV--GPAQELVEMPFFQTIAR-ALRPGGVLCNMAES 263
            DA   L   ++ K+D ++ D +DPV  GP  +L    F+Q I +  L P G+    A  
Sbjct: 167 KDAKAELEK-REEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLSPNGIFVTQAGP 226

Query: 264 MWLHTH--LIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPI 323
             + TH  +   + +  +Q FK V      VP++ +   G+++ S      +F   V+ +
Sbjct: 227 AGIFTHKEVFTSIYNTMKQVFKYVKAYTAHVPSF-ADTWGWVMASDH----EFDVEVDEM 286

Query: 324 EKLGHLKSKRELKFYNSEMHLAAFALPS----FLKSEVKALSDASASLKKG 366
           ++    +   EL + N+   ++A  L       L+ E +  S+ +A    G
Sbjct: 287 DRRIEERVNGELMYLNAPSFVSAATLNKTISLALEKETEVYSEENARFIHG 331

[Close]

BLAST of Carg20348 vs. Swiss-Prot
Match: sp|Q94BN2|SPSY_ARATH (Spermine synthase OS=Arabidopsis thaliana OX=3702 GN=SPMS PE=1 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.1e-162
Identity = 277/357 (77.59%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISE- 60
           ME   G  L CQ  M DGKA+NGNGL+K +PSCCLKA A  PE +A+CHSTVVSGW SE 
Sbjct: 1   MEGDVGIGLVCQNTM-DGKASNGNGLEKTVPSCCLKAMACVPEDDAKCHSTVVSGWFSEP 60

Query: 61  FQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIV 120
                 K  K VYFNNPMWPGEAHSL+VE +LFK KS++QEV+VFESA+YGKVLVLDGIV
Sbjct: 61  HPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIV 120

Query: 121 QLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMV 180
           QLTEKDECAYQEMIAHLPLCSI SPK VLVVGGGDGGVLREISRH SVE IDICEID+MV
Sbjct: 121 QLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMV 180

Query: 181 INVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMP 240
           I+VSK+FFP+LAVGF+DPRV LH+GDA EFLR + +GKYDA+IVDSSDPVGPA  LVE P
Sbjct: 181 IDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKP 240

Query: 241 FFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGF 300
           FF+T+ARAL+PGGVLCNMAESMWLHTHLI+DMISICRQTFK VHYAW+SVPTYPSGVIGF
Sbjct: 241 FFETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGF 300

Query: 301 LLCSTEGPTVDFRNPVNPIEKL-GHLKSKRELKFYNSEMHLAAFALPSFLKSEVKAL 356
           +LCSTEGP VDF+NP+NPIEKL G +  KRELKFYNS+MH AAFALP+FL+ EV +L
Sbjct: 301 VLCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of Carg20348 vs. Swiss-Prot
Match: sp|Q9ZUB3|SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SPDSYN1 PE=1 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-124
Identity = 206/321 (64.17%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 35  LKAKASDPELEAQCHSTVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKG 94
           ++ +  D + E  C STV+ GW SE               +PMWPGEAHSL+VE +LF+G
Sbjct: 26  METENGDQKKEPACFSTVIPGWFSEM--------------SPMWPGEAHSLKVEKVLFQG 85

Query: 95  KSEYQEVMVFESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGD 154
           KS+YQ+V+VF+SA+YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGD
Sbjct: 86  KSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGD 145

Query: 155 GGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAK 214
           GGVLRE++RH S+E ID+CEID+MV++VSKQFFP +A+G+EDPRV+L +GD V FL+NA 
Sbjct: 146 GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA 205

Query: 215 QGKYDAVIVDSSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISI 274
           +G YDAVIVDSSDP+GPA+EL E PFFQ++ARALRPGGV+C  AES+WLH  +I+D++S 
Sbjct: 206 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSN 265

Query: 275 CRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFY 334
           CR+ FK  V+YAWTSVPTYPSGVIGF+LCSTEGP VDF++P+NPI++    KS   LKFY
Sbjct: 266 CREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDE-SSSKSNGPLKFY 325

Query: 335 NSEMHLAAFALPSFLKSEVKA 355
           N+E+H AAF LPSF K  +++
Sbjct: 326 NAEIHSAAFCLPSFAKKVIES 331

[Close]

BLAST of Carg20348 vs. Swiss-Prot
Match: sp|Q9ZTR0|SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum OX=3888 GN=SPDSYN2 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.9e-124
Identity = 211/338 (62.43%), Postives = 263/338 (77.81%), Query Frame = 0


Query: 16  DDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEFQSGSDKASKFVYFNN 75
           DD + +NG     ++ +  +  +  D +      S+V+ GW SE               +
Sbjct: 18  DDDEKSNG----FSVSAVSMDVEGGDKDPSGNGVSSVIPGWFSEI--------------S 77

Query: 76  PMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQLTEKDECAYQEMIAH 135
           PMWPGEAHSL++E ILF+GKSEYQ+VMVF+S++YGKVLVLDG++QLTE+DECAYQEMI H
Sbjct: 78  PMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITH 137

Query: 136 LPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVINVSKQFFPQLAVGFE 195
           LPLCSIP+PK VLV+GGGDGGVLRE++RH S+E IDICEID MV+ VSKQFFP++AVGF 
Sbjct: 138 LPLCSIPNPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFN 197

Query: 196 DPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPFFQTIARALRPGGVLC 255
           DPRV L +GD V FL+ A +G YDAVIVDSSDP+GPAQEL E PFFQ++ARALRPGGV+C
Sbjct: 198 DPRVTLRIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVMC 257

Query: 256 NMAESMWLHTHLIQDMISICRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNP 315
             AES+WLH  +I+D++S CR  FK  V+YAWT+VPTYPSG+IGF+LCSTEGP VDF++P
Sbjct: 258 TQAESIWLHMDIIEDIVSNCRHIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPLVDFKHP 317

Query: 316 VNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEV 353
           VNPI++    KS R LKFYNSE+H AAF LPSF K ++
Sbjct: 318 VNPIDQKDCQKSVRPLKFYNSEIHTAAFCLPSFAKRKI 337

[Close]

BLAST of Carg20348 vs. Swiss-Prot
Match: sp|Q96557|SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.1e-124
Identity = 205/310 (66.13%), Postives = 254/310 (81.94%), Query Frame = 0


Query: 45  EAQCHSTVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVF 104
           E+ C S+V+ GW SE               +P+WPGEAHSL+VE ILF+GKS+YQ+VMVF
Sbjct: 18  ESPCISSVLPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQDVMVF 77

Query: 105 ESASYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH 164
           +S +YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGDGGVLRE+SRH
Sbjct: 78  QSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRH 137

Query: 165 DSVEHIDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVD 224
            SVE IDICEID+MV+ V+KQFFP +AVG+EDPRV+LH+GD V FL+N   G YDAVIVD
Sbjct: 138 SSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVD 197

Query: 225 SSDPVGPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVH 284
           SSDP+GPAQEL E PFF+TIARALRPGGV+   AES+WLH H+I+++++ CR+ FK  V+
Sbjct: 198 SSDPIGPAQELFEKPFFETIARALRPGGVVSTQAESIWLHMHIIEEIVANCREIFKGSVN 257

Query: 285 YAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFA 344
           YAWT+VPTYPSG+IGF+LCSTEGP VDF+NP+NPI+   H ++   LKFYNSE+H A+F 
Sbjct: 258 YAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDDESHGQTIGPLKFYNSEIHQASFC 313

Query: 345 LPSFLKSEVK 354
           LPSF K  ++
Sbjct: 318 LPSFAKRVIE 313

[Close]

BLAST of Carg20348 vs. Swiss-Prot
Match: sp|O48659|SPD2_HYONI (Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 8.8e-124
Identity = 206/307 (67.10%), Postives = 254/307 (82.74%), Query Frame = 0


Query: 50  STVVSGWISEFQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASY 109
           S+++ GW SE               +P+WPGEAHSL+VE ILF+GKS+YQ V+VF+S++Y
Sbjct: 13  SSILPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQNVVVFQSSTY 72

Query: 110 GKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEH 169
           GKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGDGGVLRE+SRH SVE 
Sbjct: 73  GKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQ 132

Query: 170 IDICEIDEMVINVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPV 229
           IDICEID+MVI+VSKQFFP +A+G+EDPRV LHVGD V FL+N  +G YDAVIVDSSDP+
Sbjct: 133 IDICEIDKMVIDVSKQFFPNVAIGYEDPRVKLHVGDGVAFLKNVPEGTYDAVIVDSSDPI 192

Query: 230 GPAQELVEMPFFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVHYAWTS 289
           GPAQEL E PFF+++ARAL PGGV+C  AES+WLH H+I+D++S CRQ FK  V+YAWT+
Sbjct: 193 GPAQELFEKPFFESVARALCPGGVVCTQAESIWLHMHIIEDIVSNCRQIFKGSVNYAWTT 252

Query: 290 VPTYPSGVIGFLLCSTEGPTVDFRNPVNPIE-KLGHLKSKRELKFYNSEMHLAAFALPSF 349
           VPTYPSGVIGF+LCSTEGP VDF+NP+NPI+    H K++  LKFYNSE+H A+F LPSF
Sbjct: 253 VPTYPSGVIGFMLCSTEGPAVDFKNPINPIDADDSHTKTRGPLKFYNSEIHSASFCLPSF 305

Query: 350 LKSEVKA 355
            K  +++
Sbjct: 313 AKRVIES 305

[Close]

BLAST of Carg20348 vs. TrEMBL
Match: tr|A0A0A0LC47|A0A0A0LC47_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G604620 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 4.3e-192
Identity = 332/369 (89.97%), Postives = 347/369 (94.04%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           MEDVTG+SLECQ IM DGK TNGNG +K IPSCCLKAK SDPELEAQCHSTVVSGW SEF
Sbjct: 1   MEDVTGKSLECQKIM-DGKVTNGNGREKVIPSCCLKAKTSDPELEAQCHSTVVSGWFSEF 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QSGSDKA K +YFNNPMWPGEAH+L+VENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ
Sbjct: 61  QSGSDKACKKLYFNNPMWPGEAHALEVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPK+VLVVGGGDGGVLREISRHDSVEHIDICEID+MVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKSVLVVGGGDGGVLREISRHDSVEHIDICEIDQMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+ FPQLAVGFEDPRVHLHVGDAVEFLRN KQGKYDA+IVDSSDPVGPAQELVEMPF
Sbjct: 181 DVSKKCFPQLAVGFEDPRVHLHVGDAVEFLRNGKQGKYDAIIVDSSDPVGPAQELVEMPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300
           F+ IA+ALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL
Sbjct: 241 FRMIAQALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGFL 300

Query: 301 LCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDASA 360
           LCSTEGP VDF NPVNPIE +GH KSKRELKFYNSEMH AAFALPSFLK EV+AL+DA A
Sbjct: 301 LCSTEGPKVDFSNPVNPIENVGHPKSKRELKFYNSEMHSAAFALPSFLKREVQALNDAPA 360

Query: 361 SLKKGSISS 370
           S K G ISS
Sbjct: 361 SGKNGCISS 368

[Close]

BLAST of Carg20348 vs. TrEMBL
Match: tr|A0A1S3B3T6|A0A1S3B3T6_CUCME (spermine synthase-like OS=Cucumis melo OX=3656 GN=LOC103485695 PE=3 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 2.8e-191
Identity = 335/370 (90.54%), Postives = 349/370 (94.32%), Query Frame = 0


Query: 1   MEDVTGRSL-ECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISE 60
           MEDVTG+SL ECQ +M DGK TNGNG  + IPSCCLKAK SDP+LEAQCHSTVVSGW SE
Sbjct: 1   MEDVTGKSLVECQKVM-DGKVTNGNG-KEVIPSCCLKAKTSDPKLEAQCHSTVVSGWFSE 60

Query: 61  FQSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIV 120
           FQSGSDKA K +YFNNPMWPGEAH+L+VENILFKGKSEYQEVMVFESASYGKVLVLDGIV
Sbjct: 61  FQSGSDKACKKLYFNNPMWPGEAHALEVENILFKGKSEYQEVMVFESASYGKVLVLDGIV 120

Query: 121 QLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMV 180
           QLTEKDECAYQEMIAHLPLCSIPSPK+VLVVGGGDGGVLREISRHDSVEHIDICEID+MV
Sbjct: 121 QLTEKDECAYQEMIAHLPLCSIPSPKSVLVVGGGDGGVLREISRHDSVEHIDICEIDQMV 180

Query: 181 INVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMP 240
           I+VSK+FFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDA+IVDSSDPVGPAQELVEMP
Sbjct: 181 IDVSKKFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAIIVDSSDPVGPAQELVEMP 240

Query: 241 FFQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFKDVHYAWTSVPTYPSGVIGF 300
           FF+  A+ALRPGGVLCNMAESMWLHTHLIQDMISIC QTFKDVHYAWTSVPTYPSGVIGF
Sbjct: 241 FFRMTAQALRPGGVLCNMAESMWLHTHLIQDMISICCQTFKDVHYAWTSVPTYPSGVIGF 300

Query: 301 LLCSTEGPTVDFRNPVNPIEKLGHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDAS 360
           LLCSTEGP VDFRNPVNPIEKLGHLKSKRELKFYNSEMH AAFALPSFLK EVKALSDA 
Sbjct: 301 LLCSTEGPKVDFRNPVNPIEKLGHLKSKRELKFYNSEMHSAAFALPSFLKREVKALSDAP 360

Query: 361 ASLKKGSISS 370
           AS K G ISS
Sbjct: 361 ASGKNGCISS 368

[Close]

BLAST of Carg20348 vs. TrEMBL
Match: tr|A0A1R3J0U0|A0A1R3J0U0_COCAP (Spermidine/spermine synthases family OS=Corchorus capsularis OX=210143 GN=CCACVL1_08391 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 2.2e-172
Identity = 299/367 (81.47%), Postives = 329/367 (89.65%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           M +  GR LECQ  M DGK  NGNG +KAIPSCCLKA AS PELEA+CHSTVVSGW SE 
Sbjct: 1   MGEGAGRGLECQKTM-DGKVNNGNGSEKAIPSCCLKAMASAPELEAKCHSTVVSGWFSES 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QS SDKA K VYF+NPMWPGEAHSL+VEN+LFKGKS+YQEV+VFES++YGKVLVLDGIVQ
Sbjct: 61  QSSSDKAGKNVYFHNPMWPGEAHSLKVENVLFKGKSDYQEVLVFESSTYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH S+EHIDICEID+MVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHSSIEHIDICEIDKMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+FFP+LAVGFEDPRVHLHVGDAVEFLR+  +GKYDA+IVDSSDPVGPAQELVE PF
Sbjct: 181 DVSKKFFPELAVGFEDPRVHLHVGDAVEFLRHVPKGKYDAIIVDSSDPVGPAQELVEKPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVHYAWTSVPTYPSGVIGF 300
           F+TIARALRPGGVLCNMAESMWLHTHLI+DMISICR+TFK  VHYAW SVPTYPSGVIGF
Sbjct: 241 FETIARALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGVIGF 300

Query: 301 LLCSTEGPTVDFRNPVNPIEKL-GHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDA 360
           L+CSTEGP VDF NP+NPIE L G    KREL+FYNSE+H AAFALPSFLK EV+ L D+
Sbjct: 301 LICSTEGPVVDFVNPINPIENLDGAYHHKRELRFYNSEIHRAAFALPSFLKREVQLLRDS 360

Query: 361 SASLKKG 366
           +A+  +G
Sbjct: 361 AATPAQG 366

[Close]

BLAST of Carg20348 vs. TrEMBL
Match: tr|A0A2P5FGC5|A0A2P5FGC5_9ROSA (Spermidine/spermine synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_072290 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 1.9e-171
Identity = 298/360 (82.78%), Postives = 326/360 (90.56%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           ME   GR LECQ  M DGK +N NG  KAIPSCCLKAKAS PELEA+CHSTV+SGW SE 
Sbjct: 1   MEGGAGRGLECQKTM-DGKESNVNGSKKAIPSCCLKAKASGPELEAKCHSTVISGWFSES 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           +S S KA K VYFNNPMWPGEAHSL+VENILFKGKSE+QEV+VFES++YGKVLVLDGIVQ
Sbjct: 61  KSNSGKACKAVYFNNPMWPGEAHSLKVENILFKGKSEFQEVLVFESSAYGKVLVLDGIVQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           LTEKDECAYQEMIAHLPLCSIP PKTVLVVGGGDGGVLREISRH SVEHIDICEID+MVI
Sbjct: 121 LTEKDECAYQEMIAHLPLCSIPLPKTVLVVGGGDGGVLREISRHSSVEHIDICEIDKMVI 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+FFP+LAVGFEDPRVHL+V DA++FLRNA +GKYDA+IVDSSDPVGPAQELVE PF
Sbjct: 181 DVSKKFFPELAVGFEDPRVHLYVDDAIKFLRNAPEGKYDAIIVDSSDPVGPAQELVERPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVHYAWTSVPTYPSGVIGF 300
           F+TIARALRPGGVLCNMAES+WLHTHLIQDMISICR+TFK  VHYAWTSVPTYPSGVIGF
Sbjct: 241 FETIARALRPGGVLCNMAESLWLHTHLIQDMISICRETFKGSVHYAWTSVPTYPSGVIGF 300

Query: 301 LLCSTEGPTVDFRNPVNPIEKL-GHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDA 359
           L+CSTEGP VDF+NPVNPIEK+ G +K KRELKFYNSE+H AAFALP+FLK EV  L D+
Sbjct: 301 LICSTEGPPVDFKNPVNPIEKVEGAVKHKRELKFYNSEVHSAAFALPTFLKREVSFLHDS 359

[Close]

BLAST of Carg20348 vs. TrEMBL
Match: tr|A0A251QPC9|A0A251QPC9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G312400 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.2e-170
Identity = 297/363 (81.82%), Postives = 328/363 (90.36%), Query Frame = 0


Query: 1   MEDVTGRSLECQTIMDDGKATNGNGLDKAIPSCCLKAKASDPELEAQCHSTVVSGWISEF 60
           ME   GR LECQ  M DGKA+NGNG +KAIPSCCLKA+AS PE EA+CHSTVVSGW SE 
Sbjct: 1   MEGGAGRGLECQKTM-DGKASNGNGSEKAIPSCCLKARASAPEAEAKCHSTVVSGWFSES 60

Query: 61  QSGSDKASKFVYFNNPMWPGEAHSLQVENILFKGKSEYQEVMVFESASYGKVLVLDGIVQ 120
           QS S+KASK VYFNNPMWPGEAHSL+VE IL+KGKSE+QE++VFES++YGKVLVLDGI+Q
Sbjct: 61  QSRSEKASKKVYFNNPMWPGEAHSLKVEKILYKGKSEFQEILVFESSTYGKVLVLDGIIQ 120

Query: 121 LTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVEHIDICEIDEMVI 180
           L+EKDECAYQEMIA LPLCSIPSPKTVLVVGGGDGGVLRE+SRH SVEHIDICEID+MV+
Sbjct: 121 LSEKDECAYQEMIALLPLCSIPSPKTVLVVGGGDGGVLREVSRHPSVEHIDICEIDKMVV 180

Query: 181 NVSKQFFPQLAVGFEDPRVHLHVGDAVEFLRNAKQGKYDAVIVDSSDPVGPAQELVEMPF 240
           +VSK+FFPQLAVGF+DPRVHLH+GDA EFLR+A +GKYDAVIVDSSDPVGPAQELVE PF
Sbjct: 181 DVSKKFFPQLAVGFQDPRVHLHIGDATEFLRHAPKGKYDAVIVDSSDPVGPAQELVEKPF 240

Query: 241 FQTIARALRPGGVLCNMAESMWLHTHLIQDMISICRQTFK-DVHYAWTSVPTYPSGVIGF 300
           F+TIARALRPGGVLCNMAESMWLHTHLIQDMIS+CR+TFK  V+YAW SVPTYPSGVIGF
Sbjct: 241 FETIARALRPGGVLCNMAESMWLHTHLIQDMISVCRETFKGSVNYAWASVPTYPSGVIGF 300

Query: 301 LLCSTEGPTVDFRNPVNPIEKL-GHLKSKRELKFYNSEMHLAAFALPSFLKSEVKALSDA 360
           LLCSTEGP VDF+NPVN IEKL G LK KREL+FYNSEMH AAFALP FL+ EV AL  +
Sbjct: 301 LLCSTEGPPVDFKNPVNSIEKLEGALKHKRELRFYNSEMHSAAFALPPFLRREVSALCHS 360

Query: 361 SAS 362
           S S
Sbjct: 361 STS 362

The following BLAST results are available for this feature:

BLAST of Carg20348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944858.1	8.1e-211	99.46	spermine synthase-like [Cucurbita moschata]	[more]
XP_022968621.1	4.5e-209	98.37	spermine synthase-like [Cucurbita maxima]	[more]
XP_023542101.1	1.3e-208	98.37	spermine synthase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022141267.1	3.3e-196	92.99	spermine synthase-like [Momordica charantia]	[more]
XP_004150312.1	6.5e-192	89.97	PREDICTED: spermine synthase-like [Cucumis sativus] >KGN58277.1 hypothetical pro...	[more]

BLAST of Carg20348 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53120.6	3.0e-159	72.14	spermidine synthase 3	[more]
AT1G23820.1	9.8e-126	64.17	spermidine synthase 1	[more]
AT1G70310.1	1.8e-119	64.19	spermidine synthase 2	[more]
AT5G19530.1	6.3e-32	28.87	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of Carg20348 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94BN2\|SPSY_ARATH	2.1e-162	77.59	Spermine synthase OS=Arabidopsis thaliana OX=3702 GN=SPMS PE=1 SV=1	[more]
sp\|Q9ZUB3\|SPD1_ARATH	1.8e-124	64.17	Spermidine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SPDSYN1 PE=1 SV=1	[more]
sp\|Q9ZTR0\|SPD2_PEA	3.9e-124	62.43	Spermidine synthase 2 OS=Pisum sativum OX=3888 GN=SPDSYN2 PE=2 SV=1	[more]
sp\|Q96557\|SPD2_DATST	5.1e-124	66.13	Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
sp\|O48659\|SPD2_HYONI	8.8e-124	67.10	Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1	[more]

BLAST of Carg20348 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LC47\|A0A0A0LC47_CUCSA	4.3e-192	89.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G604620 PE=3 SV=1	[more]
tr\|A0A1S3B3T6\|A0A1S3B3T6_CUCME	2.8e-191	90.54	spermine synthase-like OS=Cucumis melo OX=3656 GN=LOC103485695 PE=3 SV=1	[more]
tr\|A0A1R3J0U0\|A0A1R3J0U0_COCAP	2.2e-172	81.47	Spermidine/spermine synthases family OS=Corchorus capsularis OX=210143 GN=CCACVL...	[more]
tr\|A0A2P5FGC5\|A0A2P5FGC5_9ROSA	1.9e-171	82.78	Spermidine/spermine synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_072290 P...	[more]
tr\|A0A251QPC9\|A0A251QPC9_PRUPE	1.2e-170	81.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G312400 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006595	polyamine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases
IPR030374	PABS
IPR030373	PABS_CS
IPR001045	Spermi_synthase
IPR035246	Spermidine_synt_N
IPR030668	Spermi_synthase_euk
IPR037163	Spermidine_synt_N_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006595	polyamine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20348-RA	Carg20348-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037163	Spermidine synthase, tetramerisation domain superfamily	GENE3D	G3DSA:2.30.140.10		coord: 47..120 e-value: 9.6E-27 score: 95.0
IPR030668	Spermidine/spermine synthase, eukaryotes	PIRSF	PIRSF000502	Spermidine_synth	coord: 43..357 e-value: 3.9E-138 score: 457.2
None	No IPR available	PFAM	PF01564	Spermine_synth	coord: 126..312 e-value: 3.0E-65 score: 219.1
None	No IPR available	GENE3D	G3DSA:3.40.50.150		coord: 121..356 e-value: 3.3E-91 score: 306.9
None	No IPR available	PANTHER	PTHR11558	SPERMIDINE/SPERMINE SYNTHASE	coord: 1..359
None	No IPR available	PANTHER	PTHR11558:SF25	SPERMINE SYNTHASE	coord: 1..359
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 168..254 e-value: 7.12668E-10 score: 54.7434
IPR035246	Spermidine synthase, tetramerisation domain	PFAM	PF17284	Spermine_synt_N	coord: 76..123 e-value: 3.6E-20 score: 71.5
IPR001045	Spermidine/spermine synthases	TIGRFAM	TIGR00417	TIGR00417	coord: 80..347 e-value: 5.7E-93 score: 309.0
IPR001045	Spermidine/spermine synthases	HAMAP	MF_00198	Spermidine_synth	coord: 55..353 score: 34.571
IPR030373	Polyamine biosynthesis domain, conserved site	PROSITE	PS01330	PABS_1	coord: 147..160
IPR030374	Polyamine biosynthesis domain	PROSITE	PS51006	PABS_2	coord: 54..304 score: 94.806
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 72..351

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20348	Cla004901	Watermelon (97103) v1	carwmB0537
Carg20348	Cla004242	Watermelon (97103) v1	carwmB0536
Carg20348	Csa5G139500	Cucumber (Chinese Long) v2	carcuB0570
Carg20348	Csa3G604620	Cucumber (Chinese Long) v2	carcuB0568
Carg20348	MELO3C005877	Melon (DHL92) v3.5.1	carmeB0542
Carg20348	ClCG01G000500	Watermelon (Charleston Gray)	carwcgB0522
Carg20348	ClCG05G008810	Watermelon (Charleston Gray)	carwcgB0525
Carg20348	CSPI05G03240	Wild cucumber (PI 183967)	carcpiB0576
Carg20348	CSPI03G26520	Wild cucumber (PI 183967)	carcpiB0574
Carg20348	Cucsa.202060	Cucumber (Gy14) v1	carcgyB0617
Carg20348	CmaCh02G011100	Cucurbita maxima (Rimu)	carcmaB0756
Carg20348	CmaCh18G013080	Cucurbita maxima (Rimu)	carcmaB0754
Carg20348	CmoCh02G011380	Cucurbita moschata (Rifu)	carcmoB0734
Carg20348	CmoCh18G013380	Cucurbita moschata (Rifu)	carcmoB0732
Carg20348	Lsi05G000860	Bottle gourd (USVL1VR-Ls)	carlsiB490
Carg20348	Lsi09G000280	Bottle gourd (USVL1VR-Ls)	carlsiB487
Carg20348	Cp4.1LG05g06010	Cucurbita pepo (Zucchini)	carcpeB0765
Carg20348	Cp4.1LG09g00380	Cucurbita pepo (Zucchini)	carcpeB0759
Carg20348	CsGy5G000510	Cucumber (Gy14) v2	carcgybB0546
Carg20348	MELO3C005877.2	Melon (DHL92) v3.6.1	carmedB0547
Carg20348	CsaV3_5G000580	Cucumber (Chinese Long) v3	carcucB0577
Carg20348	Cla97C01G000540	Watermelon (97103) v2	carwmbB0563
Carg20348	Cla97C05G091060	Watermelon (97103) v2	carwmbB0566
Carg20348	Bhi12G000551	Wax gourd	carwgoB0647
Carg20348	Bhi01G001095	Wax gourd	carwgoB0649

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20348	Carg14021	Silver-seed gourd	carcarB490

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20348	Silver-seed gourd	carcarB503
Carg20348	Cucurbita maxima (Rimu)	carcmaB0752
Carg20348	Cucurbita maxima (Rimu)	carcmaB0751
Carg20348	Cucurbita moschata (Rifu)	carcmoB0729
Carg20348	Cucurbita moschata (Rifu)	carcmoB0730
Carg20348	Cucurbita pepo (Zucchini)	carcpeB0760
Carg20348	Cucurbita pepo (Zucchini)	carcpeB0761
Carg20348	Melon (DHL92) v3.5.1	carmeB0546
Carg20348	Melon (DHL92) v3.6.1	carmedB0552