Carg20343 (gene) Silver-seed gourd

Overview
NameCarg20343
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger protein CONSTANS
LocationCucurbita_argyrosperma_scaffold_178 : 152910 .. 154479 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGGTAAGACATGTTACAACAATGGTCAGTTGTTTCTAGGCTTTGGACTTGATAGATCTTTAATTTTTTGTTTTTTTTTTTTTTTGGGCTGCAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGGTAAAAAGAAAACAGAATGTTACCTTTCATTTCAAATCATCAGAAACTTATCAAAGCCCTTTCAGGAACTCCCACTCTAGGCCTGTATGCATGTAATCCCCACCCAAACCCCCCGTTAGTAGATATTGTCTCCGTTGGGCTTTCCCTTTCAGGTTTTCCTTAAGGTTTTCAAAACGCGTATGCTAAGCAGAGGTTTCCACATCCTTATTAAGAATGTTTCGTTCTCCTTCCCAACCAACGTGGGATCTCACAATCTACCCTCCTTCTGCCCAGTGTCCTCACTGACACTCATTCCTTTCTCCAATCGATGTGGGACCCCCCCAATCCACCCCCTTCGTGTCCACCTCCTTTTGGGGTCTAGCCTCCTCGTTGGCACACCGCTTCGTGTCCATCTCCCTTCGGAGCTTAGCCTTCTCGTTGGCACATCGTTGATGCCTGGCTGTGATACTATTCATAACGGCCCAAGCCCACCGCTAGCAGATATGTTCTCTTTGGGCTTTCCCTCCAAGTTTTTTAAACACATCTGCTAGAGAGAAGTTTCCACACCCTTATAAAGATTGTTTCGTTCTCCTTACCAACAACTAAGTTGTGGGATCTTACACACATATTCTTGCATATACAGTATCTAATCTTGGTGAATTGTTGTTCATAAATTTCATTGTATGGTCTGGTTTTCAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

mRNA sequence

ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

Coding sequence (CDS)

ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

Protein sequence

MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLLNEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQCCFYEKNKNEKQYRHEKLVVKMRWES
Homology
[Close]
BLAST of Carg20343 vs. NCBI nr
Match: XP_022945268.1 (uncharacterized protein LOC111449566 [Cucurbita moschata])

HSP 1 Score: 526.2 bits (1354), Expect = 6.6e-146
Identity = 264/266 (99.25%), Postives = 265/266 (99.62%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 164 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 240
           INEERLEKLY +RNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ
Sbjct: 224 INEERLEKLYIHRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 283

Query: 241 CCFYEKNKNEKQYRHEKLVVKMRWES 267
           CCFYEKNKNEKQYRHEKLVVKMRWES
Sbjct: 284 CCFYEKNKNEKQYRHEKLVVKMRWES 309

[Close]
BLAST of Carg20343 vs. NCBI nr
Match: XP_023541455.1 (putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.5 bits (1181), Expect = 7.6e-126
Identity = 230/232 (99.14%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPT+KPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 164 SMDLLKEPTIKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Carg20343 vs. NCBI nr
Match: XP_022968160.1 (putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGL PVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLHPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE+LNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPESLNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPT+KPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRP FSNC
Sbjct: 164 SMDLLKEPTIKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPSFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV
Sbjct: 224 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 275

[Close]
BLAST of Carg20343 vs. NCBI nr
Match: XP_022923117.1 (uncharacterized protein LOC111430881 isoform X1 [Cucurbita moschata] >XP_022923118.1 uncharacterized protein LOC111430881 isoform X2 [Cucurbita moschata])

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 198/232 (85.34%), Postives = 215/232 (92.67%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVE+TF+GLDPVMAAISM+SCAEEVISPEGL+VADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLP+ LNI+IPVL PE+NQIPENK  PD SIQKS+S G L+
Sbjct: 104 NEVYYECEKDLLEKAALERPLPDVLNIEIPVLNPEDNQIPENKSFPDASIQKSSSLGCLN 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KP  IDFP MDFSSVYGMRRAFSEGDIKTLG+DKIGMIHS   RP+FSNC
Sbjct: 164 SMDLVQGPTIKPCFIDFPDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
            +EERLEKL RYR K+TKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRTKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Carg20343 vs. NCBI nr
Match: XP_008466816.1 (PREDICTED: uncharacterized protein LOC103504133 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 3.5e-107
Identity = 200/232 (86.21%), Postives = 214/232 (92.24%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           M GEGDLFEAPQPQP++++TFIGLDPVMAAISM+SCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MVGEGDLFEAPQPQPYIDETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE LNI+IPVL PEENQIPENKP  D SIQKSTS   LS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KPS IDF  MDFSSVYGMRRAFSEGDIKTLG+DK+GMIHS   RP+FSNC
Sbjct: 164 SMDLMQGPTIKPSFIDFSDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
            +EERLEKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Carg20343 vs. TAIR10
Match: AT4G27900.1 (CCT motif family protein)

HSP 1 Score: 191.0 bits (484), Expect = 9.1e-49
Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 2   GGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQND-QLL 61
           G E DLF+A  P+P +E+  + +DP              +S E +++ D  SLQ+D QL+
Sbjct: 48  GEESDLFKA--PEPIIEEPMLAVDP--------------LSQELVELGDLGSLQSDQQLI 107

Query: 62  NEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENK-PLPDVSIQKSTSSGG 121
           ++ +Y+CE+DLL K+A+E PL E L+I +I ++   +N +      + DV I KS SSG 
Sbjct: 108 DKAFYDCEQDLLVKSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGN 167

Query: 122 LSSMDLLK-EPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF 181
           LSSMD+++ +  V     DFP +D    YGMRRAFSE DI+TLG    G++ S   R + 
Sbjct: 168 LSSMDMVEHKDAVIQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIII 227

Query: 182 SNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           S C +E+R EKL RYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAKT+E +
Sbjct: 228 S-CTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260

[Close]
BLAST of Carg20343 vs. TAIR10
Match: AT5G53420.1 (CCT motif family protein)

HSP 1 Score: 188.0 bits (476), Expect = 7.7e-48
Identity = 116/232 (50.00%), Postives = 157/232 (67.67%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGL-KVADFQSLQN-DQ 60
           +G E DLF A  P P +E+  + +DP+ AA++M+SC E+  + +GL ++ D  SLQ+  Q
Sbjct: 50  IGEESDLFRA--PDPILEEPILTVDPLSAALTMISCGED--TSQGLCELPDLGSLQSGQQ 109

Query: 61  LLNEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENKPLPDVSIQKSTSSG 120
           LL++ +YECE+DL+ K+A+E P  + L+I +I V+      I EN+      +QKS SSG
Sbjct: 110 LLDKAFYECEQDLMMKSAMESPFSDVLDIKNISVV----TTINENQ-----DMQKSVSSG 169

Query: 121 GLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF 180
            LSSMD          + +FP  DF   YGMRRAFSEGDI+ LG    G++ S   R + 
Sbjct: 170 NLSSMDWSHAQQETVMIQNFPDFDFG--YGMRRAFSEGDIQKLG---AGLVQSPLDRIIV 229

Query: 181 SNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE 230
           S C +E+R EKL RY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAKT+E
Sbjct: 230 S-CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262

[Close]
BLAST of Carg20343 vs. TAIR10
Match: AT1G04500.1 (CCT motif family protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0 

Query: 103 KPLPDVSIQKSTSSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGN 162
           KP  D  ++    +GGL   D +K P   P      G+D   V       ++  +  LG 
Sbjct: 211 KPSHDQLMEIQADNGGLFCPDPIK-PIFNPGDHHLQGLD--GVENQNHMVAQPVLPQLGT 270

Query: 163 DKIGMIHSSFQRPLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRG 222
           +  G+   SF +        E+R EK++RY  K+ +RNF +KIKYACRK LADS+PR+RG
Sbjct: 271 EITGLDDPSFNK--VGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRG 330

Query: 223 RFAKTDE 230
           RFAK DE
Sbjct: 331 RFAKNDE 332

[Close]
BLAST of Carg20343 vs. TAIR10
Match: AT1G63820.1 (CCT motif family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0 

Query: 133 SLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC------------ 192
           +L++ P   F S + MRR +S GD++ LG D  G    S+  PL +              
Sbjct: 125 NLLNSPEDSFFSDH-MRRVYSTGDLQNLGRDFTG--QRSYSSPLAAESSPTTVFSGDEQS 184

Query: 193 ------INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSR 240
                  +EER EK+ +YR K+T+RNF + IKYACRK LAD++PR+RGRFA+ DE   + 
Sbjct: 185 LRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENP 244

[Close]
BLAST of Carg20343 vs. TAIR10
Match: AT2G33350.1 (CCT motif family protein)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-12
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 183 EERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE 230
           E+R EK+ RY  K+ +RNF +KIKYACRK LADS+PR+RGRFAK DE
Sbjct: 309 EQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 355

[Close]
BLAST of Carg20343 vs. Swiss-Prot
Match: sp|O82117|CO3_ORYSJ (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 115 SSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQR 174
           S G   SM  L+  +  P   D    D ++ Y +R + S  D+ T         HS    
Sbjct: 204 SLGHSVSMSSLENMSTVP---DCGVPDITTSY-LRSSKSTIDLFTAAAGSPVAAHSIMSP 263

Query: 175 PLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
           P F   I+ E   +++RYR K+  R F + I+YA RKA A+++PRI+GRFAK  +T++
Sbjct: 264 PQFMGAIDRE--ARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSDTDL 315

[Close]
BLAST of Carg20343 vs. Swiss-Prot
Match: sp|Q9FHH8|COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.0e-06
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE--------VSRA 241
           +R  ++ RYR K+  R F + I+YA RKA A+S+PRI+GRFAK  ETE        V  +
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYAS 343

[Close]
BLAST of Carg20343 vs. Swiss-Prot
Match: sp|Q96502|COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           ER  ++ RYR KK  R F + I+YA RKA A+ +PRI+GRFAK  ETE
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETE 324

[Close]
BLAST of Carg20343 vs. Swiss-Prot
Match: sp|Q940T9|COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAK-TDETEVSRAVAH 239
           ER  ++ RYR K+  R F + I+YA RKA A+ +PRI+GRFAK TD  E +  V H
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGH 349

[Close]
BLAST of Carg20343 vs. Swiss-Prot
Match: sp|E5RQA1|GHD7_ORYSJ (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           ER  KL RY+ K+ KR + ++I+YA RKA A+ +PR+RGRFAK  + E
Sbjct: 189 EREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPDQE 236

[Close]
BLAST of Carg20343 vs. TrEMBL
Match: tr|A0A1S3CS26|A0A1S3CS26_CUCME (uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.3e-107
Identity = 200/232 (86.21%), Postives = 214/232 (92.24%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           M GEGDLFEAPQPQP++++TFIGLDPVMAAISM+SCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MVGEGDLFEAPQPQPYIDETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE LNI+IPVL PEENQIPENKP  D SIQKSTS   LS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KPS IDF  MDFSSVYGMRRAFSEGDIKTLG+DK+GMIHS   RP+FSNC
Sbjct: 164 SMDLMQGPTIKPSFIDFSDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
            +EERLEKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Carg20343 vs. TrEMBL
Match: tr|A0A0A0LC99|A0A0A0LC99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G247880 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.8e-103
Identity = 193/232 (83.19%), Postives = 210/232 (90.52%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           M GEGDLFEAPQPQP++++TFIGLDPVMAAISM+SCA+EVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MVGEGDLFEAPQPQPYIDETFIGLDPVMAAISMISCADEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE LNI+IPVL P+ENQI ENKP  + SIQKSTS   LS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEDLNIEIPVLNPDENQISENKPFLEASIQKSTSLECLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KPS IDF  MDFSSVYGMRRAFSEGDIKTLG+DK+GMIHS   RP+F N 
Sbjct: 164 SMDLMQGPTIKPSFIDFSDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPMFGNF 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
            + ERLEKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSGERLEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Carg20343 vs. TrEMBL
Match: tr|A0A067JQ78|A0A067JQ78_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25976 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.2e-80
Identity = 153/235 (65.11%), Postives = 192/235 (81.70%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           +GGEGDLF+A  P+P +E++ +GLDP+ AAISM+SC +EVIS +GLKVAD +S+Q +Q L
Sbjct: 49  LGGEGDLFKA--PEPIIEESIVGLDPMTAAISMISCGDEVISSQGLKVADIESIQTEQFL 108

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           +EV+YEC KDL+EKAA+E PL E L+I IPV+  +ENQI ENK LPDV + KS SSG LS
Sbjct: 109 SEVFYECRKDLMEKAAIETPLAEILDIKIPVMRADENQIQENKVLPDVPLPKSVSSGCLS 168

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPL-FSN 180
           SM+ +    VKP+ +DF G+D  +VYGMRRA+SEGDIKTLGN  I +IHS+  RPL  S+
Sbjct: 169 SMEWVHGAAVKPNFLDFSGVDLGTVYGMRRAYSEGDIKTLGNGNISLIHSTLDRPLTISS 228

Query: 181 CINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSR 235
           C  E+R EKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKT+++++S+
Sbjct: 229 CTTEDRKEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEDSDISK 281

[Close]
BLAST of Carg20343 vs. TrEMBL
Match: tr|A0A0A0KN81|A0A0A0KN81_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139450 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.0e-78
Identity = 156/233 (66.95%), Postives = 185/233 (79.40%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLF+A  P+P +E++F GLDP+MAAISMMS     IS EGLK +DF+SLQ+DQLL
Sbjct: 49  MGGEGDLFKA--PEPIIEESFSGLDPMMAAISMMSFGNPNISLEGLKDSDFESLQSDQLL 108

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           +EVYYECEKDLLEKAA+  PL E  ++       +E+QIPENKP+PD ++QKS SSG L 
Sbjct: 109 SEVYYECEKDLLEKAAIHTPLSEVFDLKSQTSNTDEHQIPENKPVPDATLQKSVSSGCLR 168

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPL-FSN 180
           SMD ++ P +K S++DF GMD + VYGMRRAFSEGDIKTL N      HSS +RPL  SN
Sbjct: 169 SMDWMQGPAMKSSILDFSGMDINEVYGMRRAFSEGDIKTLSNGSGSQFHSSLERPLIISN 228

Query: 181 CINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
           C  EER EKL RYRNK+TKRNFGRKIKYACRKALADSQPRIRGRFAKT+E+E+
Sbjct: 229 CTAEERKEKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEI 279

[Close]
BLAST of Carg20343 vs. TrEMBL
Match: tr|A0A2I4H3L8|A0A2I4H3L8_9ROSI (putative zinc finger protein CONSTANS-LIKE 11 OS=Juglans regia OX=51240 GN=LOC109013207 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.0e-78
Identity = 156/235 (66.38%), Postives = 188/235 (80.00%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           +GGEGDLF+A  P+P +E+ F+ LDP+ AAISM+SC ++VIS +GLKVAD +SLQN+QLL
Sbjct: 48  LGGEGDLFKA--PEPIIEEQFVSLDPMTAAISMISCGQDVISTQGLKVADIESLQNEQLL 107

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           +EV+YEC KDLLEKAA+E P  E L+I IP+   +EN+I EN+ LP V  QKS SS  LS
Sbjct: 108 SEVFYECRKDLLEKAAIEAPPFEVLDIKIPLSSIDENKIQENRQLPAVPFQKSVSSECLS 167

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF-SN 180
           SM+ +    VKPS +DFPGMD  +VYGMRRAFS+GDIKTLGN  + +IHS  +RPL  SN
Sbjct: 168 SMEWMHGAAVKPSFLDFPGMDLGTVYGMRRAFSDGDIKTLGNG-MSLIHSPLERPLIVSN 227

Query: 181 CINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSR 235
           C  EER EKL RYRNKKTKRNFGRKIKYACRKALADSQPR+RGRFAKTDE++  R
Sbjct: 228 CTTEERWEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKTDESDAKR 279

The following BLAST results are available for this feature:
BLAST of Carg20343 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945268.16.6e-14699.25uncharacterized protein LOC111449566 [Cucurbita moschata][more]
XP_023541455.17.6e-12699.14putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo][more]
XP_022968160.11.9e-12498.28putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita maxima][more]
XP_022923117.11.6e-10785.34uncharacterized protein LOC111430881 isoform X1 [Cucurbita moschata] >XP_0229231... [more]
XP_008466816.13.5e-10786.21PREDICTED: uncharacterized protein LOC103504133 [Cucumis melo][more]
BLAST of Carg20343 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27900.19.1e-4949.15CCT motif family protein[more]
AT5G53420.17.7e-4850.00CCT motif family protein[more]
AT1G04500.11.0e-1539.37CCT motif family protein[more]
AT1G63820.11.7e-1540.00CCT motif family protein[more]
AT2G33350.15.2e-1268.09CCT motif family protein[more]
BLAST of Carg20343 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82117|CO3_ORYSJ2.2e-0734.75Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=... [more]
sp|Q9FHH8|COL5_ARATH7.0e-0646.15Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2... [more]
sp|Q96502|COL2_ARATH1.6e-0556.25Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1... [more]
sp|Q940T9|COL4_ARATH2.0e-0550.00Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2... [more]
sp|E5RQA1|GHD7_ORYSJ3.5e-0552.08Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 ... [more]
BLAST of Carg20343 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CS26|A0A1S3CS26_CUCME2.3e-10786.21uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=... [more]
tr|A0A0A0LC99|A0A0A0LC99_CUCSA7.8e-10383.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G247880 PE=4 SV=1[more]
tr|A0A067JQ78|A0A067JQ78_JATCU4.2e-8065.11Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25976 PE=4 SV=1[more]
tr|A0A0A0KN81|A0A0A0KN81_CUCSA1.0e-7866.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139450 PE=4 SV=1[more]
tr|A0A2I4H3L8|A0A2I4H3L8_9ROSI3.0e-7866.38putative zinc finger protein CONSTANS-LIKE 11 OS=Juglans regia OX=51240 GN=LOC10... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20343-RACarg20343-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 185..227
e-value: 2.9E-16
score: 59.1
IPR010402CCT domainPROSITEPS51017CCTcoord: 185..227
score: 14.832
NoneNo IPR availablePANTHERPTHR31717FAMILY NOT NAMEDcoord: 1..234
NoneNo IPR availablePANTHERPTHR31717:SF2CCT MOTIF FAMILY PROTEINcoord: 1..234

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20343Cla004250Watermelon (97103) v1carwmB0536
Carg20343Cla004898Watermelon (97103) v1carwmB0537
Carg20343Csa5G139450Cucumber (Chinese Long) v2carcuB0570
Carg20343Csa3G247880Cucumber (Chinese Long) v2carcuB0567
Carg20343MELO3C008491Melon (DHL92) v3.5.1carmeB0546
Carg20343MELO3C005883Melon (DHL92) v3.5.1carmeB0542
Carg20343ClCG05G008890Watermelon (Charleston Gray)carwcgB0525
Carg20343ClCG01G000460Watermelon (Charleston Gray)carwcgB0522
Carg20343CSPI03G19890Wild cucumber (PI 183967)carcpiB0573
Carg20343CSPI05G03190Wild cucumber (PI 183967)carcpiB0576
Carg20343Cucsa.032080Cucumber (Gy14) v1carcgyB0615
Carg20343Cucsa.202100Cucumber (Gy14) v1carcgyB0617
Carg20343CmaCh15G010290Cucurbita maxima (Rimu)carcmaB0751
Carg20343CmaCh16G000520Cucurbita maxima (Rimu)carcmaB0752
Carg20343CmaCh02G011150Cucurbita maxima (Rimu)carcmaB0756
Carg20343CmaCh18G013150Cucurbita maxima (Rimu)carcmaB0754
Carg20343CmoCh02G011420Cucurbita moschata (Rifu)carcmoB0734
Carg20343CmoCh18G013450Cucurbita moschata (Rifu)carcmoB0732
Carg20343CmoCh16G000590Cucurbita moschata (Rifu)carcmoB0730
Carg20343CmoCh15G010920Cucurbita moschata (Rifu)carcmoB0729
Carg20343Lsi09G000250Bottle gourd (USVL1VR-Ls)carlsiB487
Carg20343Lsi05G000970Bottle gourd (USVL1VR-Ls)carlsiB490
Carg20343Cp4.1LG14g06810Cucurbita pepo (Zucchini)carcpeB0761
Carg20343Cp4.1LG13g03110Cucurbita pepo (Zucchini)carcpeB0760
Carg20343Cp4.1LG09g00220Cucurbita pepo (Zucchini)carcpeB0759
Carg20343Cp4.1LG05g06040Cucurbita pepo (Zucchini)carcpeB0765
Carg20343CsGy3G019770Cucumber (Gy14) v2carcgybB0543
Carg20343CsGy5G000450Cucumber (Gy14) v2carcgybB0546
Carg20343MELO3C008491.2Melon (DHL92) v3.6.1carmedB0552
Carg20343MELO3C005883.2Melon (DHL92) v3.6.1carmedB0547
Carg20343CsaV3_5G000530Cucumber (Chinese Long) v3carcucB0577
Carg20343CsaV3_3G019950Cucumber (Chinese Long) v3carcucB0574
Carg20343Cla97C01G000500Watermelon (97103) v2carwmbB0563
Carg20343Cla97C05G091170Watermelon (97103) v2carwmbB0566
Carg20343Bhi12G000557Wax gourdcarwgoB0647
Carg20343Bhi01G001107Wax gourdcarwgoB0649
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20343Carg14017Silver-seed gourdcarcarB490
Carg20343Carg15067Silver-seed gourdcarcarB503
The following block(s) are covering this gene:

None