Carg20327 (gene) Silver-seed gourd

NameCarg20327
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_178 : 104898 .. 105176 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCAAAGAGGTTCGGCATAGGACCCATTTCAAATCCCGCGTTGCCAACTTCGGTTTCCGAGGCCCGATCTTCAACTTTAGGAGTATGAATTGCTCGACCTCGTGGTAAATGGGATTCTTGTGGAGGATTTGTATTATTGAGTCCGAGTTTTGATTATATCGAATTGTGTGCTCTGCTCTTTCTTATGCTGGTTTCTGCTTTACAGGTCGAACCGATGGAAGAAACTCCACCGGTCAATTCTTCCGGACCCACGAAGGGCTTGTTGACTCAGTAG

mRNA sequence

ATGCAATCAAAGAGGTTCGGCATAGGACCCATTTCAAATCCCGCGTTGCCAACTTCGGTTTCCGAGGCCCGATCTTCAACTTTAGGAGTCGAACCGATGGAAGAAACTCCACCGGTCAATTCTTCCGGACCCACGAAGGGCTTGTTGACTCAGTAG

Coding sequence (CDS)

ATGCAATCAAAGAGGTTCGGCATAGGACCCATTTCAAATCCCGCGTTGCCAACTTCGGTTTCCGAGGCCCGATCTTCAACTTTAGGAGTCGAACCGATGGAAGAAACTCCACCGGTCAATTCTTCCGGACCCACGAAGGGCTTGTTGACTCAGTAG

Protein sequence

MQSKRFGIGPISNPALPTSVSEARSSTLGVEPMEETPPVNSSGPTKGLLTQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20327-RACarg20327-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg20327Watermelon (97103) v2carwmbB0565
Carg20327Watermelon (97103) v2carwmbB0566
Carg20327Watermelon (97103) v2carwmbB0563
Carg20327Wax gourdcarwgoB0647
Carg20327Wax gourdcarwgoB0648
Carg20327Wax gourdcarwgoB0649
Carg20327Cucurbita maxima (Rimu)carcmaB0753
Carg20327Silver-seed gourdcarcarB490
Carg20327Silver-seed gourdcarcarB503
Carg20327Silver-seed gourdcarcarB504
Carg20327Cucumber (Gy14) v2carcgybB0543
Carg20327Cucumber (Gy14) v2carcgybB0545
Carg20327Cucumber (Gy14) v2carcgybB0546
Carg20327Cucumber (Gy14) v1carcgyB0614
Carg20327Cucumber (Gy14) v1carcgyB0615
Carg20327Cucumber (Gy14) v1carcgyB0617
Carg20327Cucurbita maxima (Rimu)carcmaB0752
Carg20327Cucurbita maxima (Rimu)carcmaB0751
Carg20327Cucurbita maxima (Rimu)carcmaB0754
Carg20327Cucurbita maxima (Rimu)carcmaB0756
Carg20327Cucurbita moschata (Rifu)carcmoB0729
Carg20327Cucurbita moschata (Rifu)carcmoB0730
Carg20327Cucurbita moschata (Rifu)carcmoB0731
Carg20327Cucurbita moschata (Rifu)carcmoB0732
Carg20327Cucurbita moschata (Rifu)carcmoB0734
Carg20327Cucurbita pepo (Zucchini)carcpeB0759
Carg20327Cucurbita pepo (Zucchini)carcpeB0760
Carg20327Cucurbita pepo (Zucchini)carcpeB0761
Carg20327Cucurbita pepo (Zucchini)carcpeB0762
Carg20327Cucurbita pepo (Zucchini)carcpeB0765
Carg20327Wild cucumber (PI 183967)carcpiB0573
Carg20327Wild cucumber (PI 183967)carcpiB0575
Carg20327Wild cucumber (PI 183967)carcpiB0576
Carg20327Cucumber (Chinese Long) v2carcuB0567
Carg20327Cucumber (Chinese Long) v2carcuB0569
Carg20327Cucumber (Chinese Long) v2carcuB0570
Carg20327Cucumber (Chinese Long) v3carcucB0574
Carg20327Cucumber (Chinese Long) v3carcucB0576
Carg20327Cucumber (Chinese Long) v3carcucB0577
Carg20327Bottle gourd (USVL1VR-Ls)carlsiB487
Carg20327Bottle gourd (USVL1VR-Ls)carlsiB488
Carg20327Bottle gourd (USVL1VR-Ls)carlsiB490
Carg20327Melon (DHL92) v3.5.1carmeB0542
Carg20327Melon (DHL92) v3.5.1carmeB0544
Carg20327Melon (DHL92) v3.5.1carmeB0546
Carg20327Melon (DHL92) v3.6.1carmedB0547
Carg20327Melon (DHL92) v3.6.1carmedB0549
Carg20327Melon (DHL92) v3.6.1carmedB0552
Carg20327Watermelon (Charleston Gray)carwcgB0522
Carg20327Watermelon (Charleston Gray)carwcgB0524
Carg20327Watermelon (Charleston Gray)carwcgB0525
Carg20327Watermelon (97103) v1carwmB0535
Carg20327Watermelon (97103) v1carwmB0536
Carg20327Watermelon (97103) v1carwmB0537