Carg20282 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGGTTAGGTTTAGAGTTTAATTTCACGAATGATTGTATATCTAGAATTTAATTTCCTAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAATCTGTTCATCGTAGTTCTGGCAATGAAATTCTAGTTCGTTGCGTGATTATTGTCTGTCCACTAAAACTATGAACATGTATAACGCTTAGACCGAATTTTTAGATAGAATGAGTGTTCGAACATATTATTTGTAGGATGAACATGTTTAAATGAATGGTGGTGCGTTCTTAAGCTTAGAGATGAATACTAATTCCATTGCGATAGATATATCAAACATGAATTCGGATATGAACTTCTTCAAATGTGTCAAAAGATTCGCAGCACCGTGCTGTTGATTTCTCATTCATCGATCATTGTTATCATTAAACTAACTCACTTTGAAGAAATGGTGATGAAGTTTTGGTAGATCTTGCTCTAGCTTTTCTAACGTTGAAACGTTTTCACGAAATAAAAATATATAATAATATATTTATTTTAATTTGTGACTCATAATAAATATAATTTCTTCTTTTATATAATATATTTAATATCAATTCGGAGTGCTTAATTTCTTTTTCAACTAAATTCTAGCAAGAAAACTTTATGAATATGTGTATTATAAACTTAAATGAAACAACTCATTAATATTAATTCATGTACGATAAGTTACTAAATATTTTATAGTCTAATCTCATTATCATCACTAACTCAATAGAATCGAGCTCAATAATTGTACGAATCCATTGTATATTAGTAGGAATTTTAGGAAAGATACTAAGTATATTTTAGGAAAAAGATTTAGATTTGTTAGGTCGAGTAGACTCTAGTATAAATACCACTCCACCCTATCTAAGTTTTCGTTGAAGAAATCCAAAAACAATAAAAATAGTAGTATGTTAGGATCGCACAACGACGTACACACTCGATCTAGATGAACACTGTACATACTTGAAGTCATCAATATAAATCATTTAGCTAGAGTTCTGTTTGCTTTTTCTTTATCCTATTCTTTGTGTTCATCTAGATCGAGTGTGTGCGTTGTTGTGCGATCCTAACATAGTATTCTACAGAATGTCTTGTATGCTCTTCTCGATTGATATTAATAAAGAGTGCGAGTGTTTCCCACAGAAAGTTGTGTTCAACACTATATTCCCTTTAGGTTCTTACTCGAGTAATATCTCTTTGTATGTTAAGTATATAATGTTTGAGATTATACTGATAATCGTGAAAAAGAAATAGCAAAACCAATAATATATTAATTAATTAAATATTCCATCTCTAATTACGTAAATAATAGCTAATATTTGCATTACATTTATATTTCTTAATTATATATCGTTTTACATATTTTGTTTCCTAATAAAATTAATTTTTTGGGCGTATTAAATAGTTAAGTAATTTTGGGCAGCAAATTTAAAATTCCCGCTGCCCGGTTCAGAAATTTCCCACTGCCCGCCAATCTCGATCCGCATAGGTTTCACGCGGATCGCTCTTTTTTCAGCCGTCGATTTCACAAAGAATCCAACGGATGACGCGATTCTTTTCCGAATTTGAAAGCCAGTCCAGAATTGCGCTTTCATATTATAAATACCCTAAACCACATTTTCGTAGTCAAACTCAGAATTTCGAATCTAATCTCTTACTGTTCGTTCTCCTTAATCGTTCGTGAAAATGTCTGGACGCGGTAAGGGAGGCAAGGGCTTGGGAAAGGGAGGAGCAAAGCGTCATAGGAAGGTTTTGAGAGACAACATTCAGGGAATCACCAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGTGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCCTTGAAAAGGCAGGGGAGGACTTTGTATGGTTTCGGA ATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGGCAAGGGCTTGGGAAAGGGAGGAGCAAAGCGTCATAGGAAGGTTTTGAGAGACAACATTCAGGGAATCACCAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGTGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCCTTGAAAAGGCAGGGGAGGACTTTGTATGGTTTCGGA ATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGGCAAGGGCTTGGGAAAGGGAGGAGCAAAGCGTCATAGGAAGGTTTTGAGAGACAACATTCAGGGAATCACCAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGTGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCCTTGAAAAGGCAGGGGAGGACTTTGTATGGTTTCGGA MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
BLAST of Carg20282 vs. NCBI nr
Match: XP_021864639.1 (uncharacterized protein LOC110803439 [Spinacia oleracea]) HSP 1 Score: 370.9 bits (951), Expect = 2.6e-99 Identity = 197/208 (94.71%), Postives = 197/208 (94.71%), Query Frame = 0
BLAST of Carg20282 vs. NCBI nr
Match: XP_016486961.1 (PREDICTED: uncharacterized protein LOC107807147 [Nicotiana tabacum] >XP_018623428.1 PREDICTED: uncharacterized protein LOC104087621 [Nicotiana tomentosiformis]) HSP 1 Score: 370.5 bits (950), Expect = 3.4e-99 Identity = 197/209 (94.26%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of Carg20282 vs. NCBI nr
Match: OTG25549.1 (putative histone H27 [Helianthus annuus]) HSP 1 Score: 369.8 bits (948), Expect = 5.9e-99 Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of Carg20282 vs. NCBI nr
Match: XP_006361210.2 (PREDICTED: uncharacterized protein LOC102591967 [Solanum tuberosum]) HSP 1 Score: 368.6 bits (945), Expect = 1.3e-98 Identity = 195/208 (93.75%), Postives = 197/208 (94.71%), Query Frame = 0
BLAST of Carg20282 vs. NCBI nr
Match: XP_018976326.1 (PREDICTED: uncharacterized protein LOC109107514 [Cyprinus carpio]) HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98 Identity = 193/207 (93.24%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of Carg20282 vs. TAIR10
Match: AT1G07660.1 (Histone superfamily protein) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. TAIR10
Match: AT1G07820.1 (Histone superfamily protein) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. TAIR10
Match: AT2G28740.1 (histone H4) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. TAIR10
Match: AT3G45930.1 (Histone superfamily protein) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. TAIR10
Match: AT3G53730.1 (Histone superfamily protein) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. Swiss-Prot
Match: sp|P62785|H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. Swiss-Prot
Match: sp|P59259|H4_ARATH (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. Swiss-Prot
Match: sp|Q6PMI5|H4_CHEMJ (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. Swiss-Prot
Match: sp|Q6WZ83|H4_EUCGL (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. Swiss-Prot
Match: sp|Q6LAF3|H4_FLATR (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg20282 vs. TrEMBL
Match: tr|A0A1S4BDS0|A0A1S4BDS0_TOBAC (Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107807147 PE=3 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.3e-99 Identity = 197/209 (94.26%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of Carg20282 vs. TrEMBL
Match: tr|A0A251UR62|A0A251UR62_HELAN (Histone H4 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0148881 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.9e-99 Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of Carg20282 vs. TrEMBL
Match: tr|A0A1U8P7P4|A0A1U8P7P4_GOSHI (Histone H4 OS=Gossypium hirsutum OX=3635 GN=LOC107955873 PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.4e-96 Identity = 197/233 (84.55%), Postives = 197/233 (84.55%), Query Frame = 0
BLAST of Carg20282 vs. TrEMBL
Match: tr|A0A0B1T7Z8|A0A0B1T7Z8_OESDE (Histone H4 OS=Oesophagostomum dentatum OX=61180 GN=OESDEN_08635 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 3.1e-96 Identity = 190/207 (91.79%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of Carg20282 vs. TrEMBL
Match: tr|A0A1S2Y6M0|A0A1S2Y6M0_CICAR (Histone H4 OS=Cicer arietinum OX=3827 GN=LOC101512088 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96 Identity = 196/233 (84.12%), Postives = 196/233 (84.12%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |