Carg20243 (gene) Silver-seed gourd

NameCarg20243
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDof zinc finger protein like
LocationCucurbita_argyrosperma_scaffold_131 : 71331 .. 72208 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATCTCCCTGCGTTACTCCTTTCTCAACAAACCTCTCTCTCTCTCTCTATAGCAAATACAGAACTCAGTCTTCCAACCTTCATCCATTCGCTGGTTTTATGAATGGATCATTCAAGCGGCCAACAAGTAAGGATTAGAATGGTTTTTGTTCAAGTTCTCAAGATATCCATTAATTTCAACTCCTGATTTGTTTGTTTAATTTTACTTCAGGAAGCTCAAGCCCGACCACTGGAGGACATGGTGGGCGTGATTTCATGTCCAAAAGTGCAGCAAGAAAACAGGAAGCCAATGAGGCCACAGCCAGAGCAAGTCCTGAGATGCCCAAGATGTGATTCTACCAACACCAAGTTCTGCTACTACAATAACTACAGTCTCTCCCAGCCAAGGTACTTTTGCAAGTCCTGTAGAAGGTATTGGACTAAAGGGGGAACTCTAAGAAATGTTCCTGTGGGTGGCTCTTGCAGGAAGAACAAAAGACCTTCACCTTCTACTTCATCTTCTTCCTCTCCATCTCCATCTTCAAAGAGATCACATGATCAGGTCGCCAATTCTAGCTATGCTAAGCTTCTAAATCAATCAAATGGAAGCATGGGTCTTTTTGATACCCACAGCAACTATCATAATATGTACAGTGGATTTGGTAATGGAAGCTCTGGGGAGGTTGAACATGGGTCTACAGAGACTGCTACAGCAATGAAGCAAGAGTTGCTACCCAATGGAGATCAAAATATGGTTTGTTGGGGATTTCCATGGCAGTTCAACAATGGGGATGGAAATTACATGGGTGATCTTGATTCTGGAAGAGAAAGCTGGAGTTTCAATGGAAATGGAATTGCTTCATCTTGGCATGGGCTTCTCAACAGTCCTCTAATGTAA

mRNA sequence

TTTATCTCCCTGCGTTACTCCTTTCTCAACAAACCTCTCTCTCTCTCTCTATAGCAAATACAGAACTCAGTCTTCCAACCTTCATCCATTCGCTGGTTTTATGAATGGATCATTCAAGCGGCCAACAAGAAGCTCAAGCCCGACCACTGGAGGACATGGTGGGCGTGATTTCATGTCCAAAAGTGCAGCAAGAAAACAGGAAGCCAATGAGGCCACAGCCAGAGCAAGTCCTGAGATGCCCAAGATGTGATTCTACCAACACCAAGTTCTGCTACTACAATAACTACAGTCTCTCCCAGCCAAGGTACTTTTGCAAGTCCTGTAGAAGGTATTGGACTAAAGGGGGAACTCTAAGAAATGTTCCTGTGGGTGGCTCTTGCAGGAAGAACAAAAGACCTTCACCTTCTACTTCATCTTCTTCCTCTCCATCTCCATCTTCAAAGAGATCACATGATCAGGTCGCCAATTCTAGCTATGCTAAGCTTCTAAATCAATCAAATGGAAGCATGGGTCTTTTTGATACCCACAGCAACTATCATAATATGTACAGTGGATTTGGTAATGGAAGCTCTGGGGAGGTTGAACATGGGTCTACAGAGACTGCTACAGCAATGAAGCAAGAGTTGCTACCCAATGGAGATCAAAATATGGTTTGTTGGGGATTTCCATGGCAGTTCAACAATGGGGATGGAAATTACATGGGTGATCTTGATTCTGGAAGAGAAAGCTGGAGTTTCAATGGAAATGGAATTGCTTCATCTTGGCATGGGCTTCTCAACAGTCCTCTAATGTAA

Coding sequence (CDS)

ATGGATCATTCAAGCGGCCAACAAGAAGCTCAAGCCCGACCACTGGAGGACATGGTGGGCGTGATTTCATGTCCAAAAGTGCAGCAAGAAAACAGGAAGCCAATGAGGCCACAGCCAGAGCAAGTCCTGAGATGCCCAAGATGTGATTCTACCAACACCAAGTTCTGCTACTACAATAACTACAGTCTCTCCCAGCCAAGGTACTTTTGCAAGTCCTGTAGAAGGTATTGGACTAAAGGGGGAACTCTAAGAAATGTTCCTGTGGGTGGCTCTTGCAGGAAGAACAAAAGACCTTCACCTTCTACTTCATCTTCTTCCTCTCCATCTCCATCTTCAAAGAGATCACATGATCAGGTCGCCAATTCTAGCTATGCTAAGCTTCTAAATCAATCAAATGGAAGCATGGGTCTTTTTGATACCCACAGCAACTATCATAATATGTACAGTGGATTTGGTAATGGAAGCTCTGGGGAGGTTGAACATGGGTCTACAGAGACTGCTACAGCAATGAAGCAAGAGTTGCTACCCAATGGAGATCAAAATATGGTTTGTTGGGGATTTCCATGGCAGTTCAACAATGGGGATGGAAATTACATGGGTGATCTTGATTCTGGAAGAGAAAGCTGGAGTTTCAATGGAAATGGAATTGCTTCATCTTGGCATGGGCTTCTCAACAGTCCTCTAATGTAA

Protein sequence

MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNKRPSPSTSSSSSPSPSSKRSHDQVANSSYAKLLNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQNMVCWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
BLAST of Carg20243 vs. NCBI nr
Match: XP_022946981.1 (dof zinc finger protein DOF3.2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 427.9 bits (1099), Expect = 2.1e-116
Identity = 224/229 (97.82%), Postives = 224/229 (97.82%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNN 60
           MDHSSGQQEAQARPLEDMVGVISCPKVQQENRK MRPQPEQVLRCPRCDSTNTKFCYYNN
Sbjct: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKAMRPQPEQVLRCPRCDSTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVA 120
           YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQ A
Sbjct: 61  YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQAA 120

Query: 121 NSSYAKLLNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQ 180
           NSSYAKLLNQSNG MGLFDTH NYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQ
Sbjct: 121 NSSYAKLLNQSNGRMGLFDTHKNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQ 180

Query: 181 NMVCWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230
           NMV WGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
Sbjct: 181 NMVSWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 229

BLAST of Carg20243 vs. NCBI nr
Match: XP_023532294.1 (dof zinc finger protein DOF3.2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.9 bits (1078), Expect = 5.7e-114
Identity = 219/229 (95.63%), Postives = 225/229 (98.25%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNN 60
           MDHSSGQQEA+A+PLEDMVG+ISCPKVQQENRK MRPQPEQVLRCPRCDSTNTKFCYYNN
Sbjct: 1   MDHSSGQQEAEAQPLEDMVGMISCPKVQQENRKAMRPQPEQVLRCPRCDSTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVA 120
           YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXS+DQ A
Sbjct: 61  YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSYDQAA 120

Query: 121 NSSYAKLLNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQ 180
           NSSYAKLLNQSNGSMGLFDTH+NYHNMYSGFGNGSSGEVEH STETATAMKQELLP+GDQ
Sbjct: 121 NSSYAKLLNQSNGSMGLFDTHNNYHNMYSGFGNGSSGEVEHASTETATAMKQELLPSGDQ 180

Query: 181 NMVCWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230
           NMV WGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
Sbjct: 181 NMVSWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 229

BLAST of Carg20243 vs. NCBI nr
Match: XP_023007417.1 (dof zinc finger protein DOF2.1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 416.8 bits (1070), Expect = 4.9e-113
Identity = 218/229 (95.20%), Postives = 222/229 (96.94%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNN 60
           MDHSSGQQEAQA+PLEDMV +ISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNN
Sbjct: 1   MDHSSGQQEAQAQPLEDMVDMISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVA 120
           YSLSQPR+FCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQ A
Sbjct: 61  YSLSQPRFFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQAA 120

Query: 121 NSSYAKLLNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQ 180
           NSSYAKLLNQSNG MGLFDTH+NYHNMYSG GNGSSGEVEH STETATAMKQELLPNGDQ
Sbjct: 121 NSSYAKLLNQSNGRMGLFDTHNNYHNMYSGLGNGSSGEVEHASTETATAMKQELLPNGDQ 180

Query: 181 NMVCWGFPWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230
           NMV WGFPWQFNN DGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
Sbjct: 181 NMVSWGFPWQFNNEDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 229

BLAST of Carg20243 vs. NCBI nr
Match: XP_022946980.1 (dof zinc finger protein DOF3.2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 413.3 bits (1061), Expect = 5.4e-112
Identity = 217/222 (97.75%), Postives = 217/222 (97.75%), Query Frame = 0

Query: 8   QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR 67
           QEAQARPLEDMVGVISCPKVQQENRK MRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR
Sbjct: 9   QEAQARPLEDMVGVISCPKVQQENRKAMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR 68

Query: 68  YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVANSSYAKL 127
           YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQ ANSSYAKL
Sbjct: 69  YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQAANSSYAKL 128

Query: 128 LNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQNMVCWGF 187
           LNQSNG MGLFDTH NYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQNMV WGF
Sbjct: 129 LNQSNGRMGLFDTHKNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQNMVSWGF 188

Query: 188 PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230
           PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
Sbjct: 189 PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230

BLAST of Carg20243 vs. NCBI nr
Match: XP_023532292.1 (dof zinc finger protein DOF3.2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.2 bits (1040), Expect = 1.5e-109
Identity = 212/222 (95.50%), Postives = 218/222 (98.20%), Query Frame = 0

Query: 8   QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR 67
           QEA+A+PLEDMVG+ISCPKVQQENRK MRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR
Sbjct: 9   QEAEAQPLEDMVGMISCPKVQQENRKAMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPR 68

Query: 68  YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVANSSYAKL 127
           YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXS+DQ ANSSYAKL
Sbjct: 69  YFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSYDQAANSSYAKL 128

Query: 128 LNQSNGSMGLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGDQNMVCWGF 187
           LNQSNGSMGLFDTH+NYHNMYSGFGNGSSGEVEH STETATAMKQELLP+GDQNMV WGF
Sbjct: 129 LNQSNGSMGLFDTHNNYHNMYSGFGNGSSGEVEHASTETATAMKQELLPSGDQNMVSWGF 188

Query: 188 PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230
           PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM
Sbjct: 189 PWQFNNGDGNYMGDLDSGRESWSFNGNGIASSWHGLLNSPLM 230

BLAST of Carg20243 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 144.8 bits (364), Expect = 6.5e-35
Identity = 93/220 (42.27%), Postives = 103/220 (46.82%), Query Frame = 0

Query: 36  RPQ-PEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRK 95
           RPQ PE  LRCPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWTKGGTLRN+PVGG CRK
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 96  NXXXXXXXXXXXXXXXXXXXSHDQVANS-----------------SYAKLLNQSNGSM-- 155
           N                   SHD    S                 ++A L  Q  GS   
Sbjct: 107 N-KRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ 166

Query: 156 ----------------GLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGD 211
                           G+F T     N    FGNGSSG                    GD
Sbjct: 167 LGFHSELGSSHQSDMEGMFGTSQQKENATYAFGNGSSG-------------------LGD 226

BLAST of Carg20243 vs. TAIR10
Match: AT3G45610.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 135.6 bits (340), Expect = 3.9e-32
Identity = 99/248 (39.92%), Postives = 122/248 (49.19%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQEN-RKPM---RP-QPEQVLRCPRCDSTNTKF 60
           MD+SS  Q        +++GV SC     +N +KP+   RP  PEQ LRCPRCDSTNTKF
Sbjct: 1   MDYSSMHQ--------NVMGVSSCSTQDYQNQKKPLSATRPAPPEQSLRCPRCDSTNTKF 60

Query: 61  CYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXS 120
           CYYNNYSLSQPRYFCKSCRRYWTKGG LRN+P+GG+ RK+                   +
Sbjct: 61  CYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKH-KRSSSATKSLRTTPEPTMT 120

Query: 121 HDQVANSSYAKLLNQSNGS-----MGLFDTHSNYH----NMYSGFGNGSS--------GE 180
           HD  +  + +   N +N S     +GL     N      + + GFG+  S        G 
Sbjct: 121 HDGKSFPTASFGYNNNNISNEQMELGLAYALLNKQPLGVSSHLGFGSSQSPMAMDGVYGT 180

Query: 181 VEHGSTETATAM-----KQELLPNGDQNMVCWGFPWQF-----NNGDGNYMGDLDSGRES 217
             H    T  A        E +   D N V WGFPWQ             +  +DSGRE 
Sbjct: 181 TSHQMENTGYAFGNGGGGMEQMATSDPNRVLWGFPWQMXXXXXXXXXXXXVDQIDSGREI 239

BLAST of Carg20243 vs. TAIR10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-27
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 1  MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPM-----------RPQPEQVLRCPRCD 60
          MD +   QE   +PLE++V   +CPK Q +  +P            RP+ +Q + CPRC+
Sbjct: 1  MDTAQWPQEIVVKPLEEIV-TNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCN 60

Query: 61 STNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVG 90
          STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 61 STNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

BLAST of Carg20243 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 36  RPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKN 95
           + +P++ + CPRC+STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGGS RKN
Sbjct: 67  KARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 126

BLAST of Carg20243 vs. TAIR10
Match: AT3G55370.3 (OBF-binding protein 3)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0

Query: 37  PQPEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKN 96
           P PE  L CPRCDSTNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG+LRNVPVGG  R+N
Sbjct: 115 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRN 173

BLAST of Carg20243 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 93/220 (42.27%), Postives = 103/220 (46.82%), Query Frame = 0

Query: 36  RPQ-PEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRK 95
           RPQ PE  LRCPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWTKGGTLRN+PVGG CRK
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 96  NXXXXXXXXXXXXXXXXXXXSHDQVANS-----------------SYAKLLNQSNGSM-- 155
           N                   SHD    S                 ++A L  Q  GS   
Sbjct: 107 N-KRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ 166

Query: 156 ----------------GLFDTHSNYHNMYSGFGNGSSGEVEHGSTETATAMKQELLPNGD 211
                           G+F T     N    FGNGSSG                    GD
Sbjct: 167 LGFHSELGSSHQSDMEGMFGTSQQKENATYAFGNGSSG-------------------LGD 226

BLAST of Carg20243 vs. Swiss-Prot
Match: sp|Q9M1E6|DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.1e-31
Identity = 99/248 (39.92%), Postives = 122/248 (49.19%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGVISCPKVQQEN-RKPM---RP-QPEQVLRCPRCDSTNTKF 60
           MD+SS  Q        +++GV SC     +N +KP+   RP  PEQ LRCPRCDSTNTKF
Sbjct: 1   MDYSSMHQ--------NVMGVSSCSTQDYQNQKKPLSATRPAPPEQSLRCPRCDSTNTKF 60

Query: 61  CYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXS 120
           CYYNNYSLSQPRYFCKSCRRYWTKGG LRN+P+GG+ RK+                   +
Sbjct: 61  CYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKH-KRSSSATKSLRTTPEPTMT 120

Query: 121 HDQVANSSYAKLLNQSNGS-----MGLFDTHSNYH----NMYSGFGNGSS--------GE 180
           HD  +  + +   N +N S     +GL     N      + + GFG+  S        G 
Sbjct: 121 HDGKSFPTASFGYNNNNISNEQMELGLAYALLNKQPLGVSSHLGFGSSQSPMAMDGVYGT 180

Query: 181 VEHGSTETATAM-----KQELLPNGDQNMVCWGFPWQF-----NNGDGNYMGDLDSGRES 217
             H    T  A        E +   D N V WGFPWQ             +  +DSGRE 
Sbjct: 181 TSHQMENTGYAFGNGGGGMEQMATSDPNRVLWGFPWQMXXXXXXXXXXXXVDQIDSGREI 239

BLAST of Carg20243 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 61/112 (54.46%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 1   MDHSSGQQEAQARPLEDMVGV-ISCPKVQQENRKPM----------------RPQPEQVL 60
           MD  SG   A + P  +   V +S P +++E R P                 RPQ  + L
Sbjct: 1   MDMISGSTAATSTPHNNQQAVMLSSPIIKEEARDPKQTRAMPQIGGSGERKPRPQLPEAL 60

Query: 61  RCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKN 96
           +CPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+GG CRKN
Sbjct: 61  KCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKN 112

BLAST of Carg20243 vs. Swiss-Prot
Match: sp|Q8LAP8|DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 1  MDHSSGQQEAQARPLEDMVGVISCPKVQQENRKPM-----------RPQPEQVLRCPRCD 60
          MD +   QE   +PLE++V   +CPK Q +  +P            RP+ +Q + CPRC+
Sbjct: 1  MDTAQWPQEIVVKPLEEIV-TNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCN 60

Query: 61 STNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVG 90
          STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 61 STNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

BLAST of Carg20243 vs. Swiss-Prot
Match: sp|Q6Z345|DOF4_ORYSJ (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0

Query: 37 PQPEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRK 95
          P PE V +CPRC+STNTKFCYYNNY+LSQPR+FCKSCRRYWTKGG LRNVPVGG CRK
Sbjct: 40 PSPEAV-KCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK 96

BLAST of Carg20243 vs. TrEMBL
Match: tr|A0A1S3CKB6|A0A1S3CKB6_CUCME (LOW QUALITY PROTEIN: dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103501912 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-86
Identity = 194/269 (72.12%), Postives = 211/269 (78.44%), Query Frame = 0

Query: 1   MDHSSGQ-QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYN 60
           MDHSSGQ QE QA+PLE+M+  ISCPKVQQENRKPMRPQPEQ LRCPRCDSTNTKFCYYN
Sbjct: 1   MDHSSGQHQETQAQPLENML-AISCPKVQQENRKPMRPQPEQALRCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQV 120
           NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG CRKN   XXXXXXXXXXXXXXXXSHDQ 
Sbjct: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKN---XXXXXXXXXXXXXXXXSHDQA 120

Query: 121 ANS----------------------SYAKLLNQSNGSMGLFD-THSNYHNMYSGFGNGSS 180
           ANS                      ++AKL +QSNG MGLFD TH+++ N+YSGFG GSS
Sbjct: 121 ANSGRLMLTDTHLPSLAFESTDLSLAFAKLQHQSNGQMGLFDTTHNSFQNLYSGFGTGSS 180

Query: 181 GEVEHG--------------STETATAMKQELLPNGDQ-NMVCWGFPWQF-NNGDGNYMG 230
           GEVE+G              ST TATAMKQE++ +GDQ NMV  GFPWQF NNGDGNYMG
Sbjct: 181 GEVENGGFPHFEHYNSSGVASTATATAMKQEMVCSGDQNNMVLLGFPWQFNNNGDGNYMG 240

BLAST of Carg20243 vs. TrEMBL
Match: tr|A0A0A0KHN1|A0A0A0KHN1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G289740 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.6e-86
Identity = 192/269 (71.38%), Postives = 209/269 (77.70%), Query Frame = 0

Query: 1   MDHSSGQ-QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYN 60
           MDHSSGQ QE QA+PLE+M+  ISCPKVQQ+NRKPMRPQPEQ LRCPRCDSTNTKFCYYN
Sbjct: 1   MDHSSGQHQETQAQPLENML-AISCPKVQQDNRKPMRPQPEQALRCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQV 120
           NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG CRKN  XXXXXXXXXXXXXXX  +HDQ 
Sbjct: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKN--XXXXXXXXXXXXXXXKRTHDQA 120

Query: 121 ANS----------------------SYAKLLNQSNGSMGLFD-THSNYHNMYSGFGNGSS 180
           ANS                      ++AKL +QSNG MGLFD TH+++ N+YSGFG GSS
Sbjct: 121 ANSGRLMLTDAHLPSLAFESTDLSLAFAKLQHQSNGQMGLFDTTHNSFQNLYSGFGTGSS 180

Query: 181 GEVEHG--------------STETATAMKQELLPNGDQ-NMVCWGFPWQF-NNGDGNYMG 230
           GEVE+G              ST TATAMKQE+  NGDQ NMV  GFPWQF NNGDGNYMG
Sbjct: 181 GEVENGGFPHFEHYNSSGVASTATATAMKQEMACNGDQNNMVLLGFPWQFNNNGDGNYMG 240

BLAST of Carg20243 vs. TrEMBL
Match: tr|A0A2N9FRI5|A0A2N9FRI5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17715 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 137/291 (47.08%), Postives = 160/291 (54.98%), Query Frame = 0

Query: 18  MVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYW 77
           M  ++ C K  Q +RKP RPQPEQ L+CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYW
Sbjct: 1   MENMLVCSK-GQPDRKP-RPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYW 60

Query: 78  TKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQVA------------NSSYA 137
           TKGGTLRNVPVGG CRKN  XXXXXX           ++   +            + ++A
Sbjct: 61  TKGGTLRNVPVGGGCRKNKRXXXXXXKRTQDQPLTPNTNPHTSFPPLSYDSPNDLSLAFA 120

Query: 138 KLLNQSNGSMGLFD------------------------------------------THSN 197
           +L  QS G +G  D                                          +H+N
Sbjct: 121 RLQKQSCGQLGFDDHDLPIMGNANSSHCDILGNHGIHNSAATTPGFFDALRSGFLESHNN 180

Query: 198 YHNMYSGFGNGS-SGEVEHG----------------------STETATAMKQELLPNG-- 230
           + NMY G+GNG+  GEV++G                      +  T T MKQEL  NG  
Sbjct: 181 FQNMYYGYGNGNMGGEVDNGGVGVSGEMVMPYEDHQMSNATTTAVTVTTMKQELC-NGRE 240

BLAST of Carg20243 vs. TrEMBL
Match: tr|A0A1Q3BTQ1|A0A1Q3BTQ1_CEPFO (Zf-Dof domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14850 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 140/306 (45.75%), Postives = 159/306 (51.96%), Query Frame = 0

Query: 1   MDHSSGQ-QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYN 60
           MD SSGQ QE     LE M   + C K QQE RKP RPQPEQ L+CPRCDSTNTKFCYYN
Sbjct: 1   MDPSSGQHQETLNHSLESM---MVCAKAQQE-RKP-RPQPEQALKCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKN---------XXXXXXXXXXXXXXX 120
           NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG CRKN                        
Sbjct: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSTSKRTQEPPLTPNTKPLTS 120

Query: 121 XXXXSHD-QVANSSYAKLLNQSNGSMGL-------------------------------- 180
               S+D      ++A+L  QS+G +G                                 
Sbjct: 121 FPSLSYDSNDLTLAFARLQKQSSGHLGFDEHDLSIFGNPINTHIGILGNPGIHTSNATPA 180

Query: 181 ---------FDTHSNYHNMYS-GFGNGSSGEVEHG----------------------STE 230
                     DT +N+ N+Y+  +GNG+ GEV+ G                      +  
Sbjct: 181 FLHALRSGYLDTQNNFQNIYNYEYGNGNMGEVDSGNGGVGVSGEMMLSYGEVTNATTTAV 240

BLAST of Carg20243 vs. TrEMBL
Match: tr|I1LR01|I1LR01_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100799737 PE=4 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 7.3e-49
Identity = 151/317 (47.63%), Postives = 175/317 (55.21%), Query Frame = 0

Query: 1   MDHSSGQ-QEAQARPLEDMVGVISCPKVQQENRKPMRPQPEQVLRCPRCDSTNTKFCYYN 60
           MD SSGQ Q+  ++ LE+M   ++C K QQE RKP RPQPEQ L+CPRCDSTNTKFCYYN
Sbjct: 1   MDPSSGQHQQMSSQSLENM---LACSKAQQE-RKP-RPQPEQALKCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNXXXXXXXXXXXXXXXXXXXSHDQ- 120
           NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG CR  XXXXXXXXXXXX       + +  
Sbjct: 61  NYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRXXXXXXXXXXXXXXRVQDQAFTPNPN 120

Query: 121 ----VANSSY---------AKLLNQSNGSMGLFDTH-----SNYH--------------- 180
               + + SY         A+L  QS G +G +D H      N+H               
Sbjct: 121 SLIGLPSLSYDSSDLTLALARLQKQSCGQLG-YDEHDLSMLGNHHPSTPCDNILGMHHHS 180

Query: 181 --------------------------NMYSGFGNGSSGEVEHGSTE-------------- 230
                                     N+Y G+GNG  GEV++G+                
Sbjct: 181 SSSTNPGFLDALRSGFLGTQSSNMQQNLYYGYGNGDMGEVDNGNASCGGEMMMMPYNDQE 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022946981.12.1e-11697.82dof zinc finger protein DOF3.2-like isoform X2 [Cucurbita moschata][more]
XP_023532294.15.7e-11495.63dof zinc finger protein DOF3.2-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023007417.14.9e-11395.20dof zinc finger protein DOF2.1-like isoform X2 [Cucurbita maxima][more]
XP_022946980.15.4e-11297.75dof zinc finger protein DOF3.2-like isoform X1 [Cucurbita moschata][more]
XP_023532292.11.5e-10995.50dof zinc finger protein DOF3.2-like isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G60200.16.5e-3542.27TARGET OF MONOPTEROS 6[more]
AT3G45610.13.9e-3239.92Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.16.5e-2755.00Dof-type zinc finger DNA-binding family protein[more]
AT3G61850.41.6e-2576.67Dof-type zinc finger DNA-binding family protein[more]
AT3G55370.32.7e-2577.97OBF-binding protein 3[more]
Match NameE-valueIdentityDescription
sp|Q84TE9|DOF53_ARATH1.2e-3342.27Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV... [more]
sp|Q9M1E6|DOF32_ARATH7.1e-3139.92Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV... [more]
sp|O24463|PBF_MAIZE1.6e-2754.46Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1[more]
sp|Q8LAP8|DOF46_ARATH1.2e-2555.00Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV... [more]
sp|Q6Z345|DOF4_ORYSJ1.3e-2484.48Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3CKB6|A0A1S3CKB6_CUCME1.1e-8672.12LOW QUALITY PROTEIN: dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656... [more]
tr|A0A0A0KHN1|A0A0A0KHN1_CUCSA2.6e-8671.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G289740 PE=4 SV=1[more]
tr|A0A2N9FRI5|A0A2N9FRI5_FAGSY1.2e-5147.08Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17715 PE=4 SV=1[more]
tr|A0A1Q3BTQ1|A0A1Q3BTQ1_CEPFO5.6e-4945.75Zf-Dof domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1... [more]
tr|I1LR01|I1LR01_SOYBN7.3e-4947.63Uncharacterized protein OS=Glycine max OX=3847 GN=100799737 PE=4 SV=2[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20243-RACarg20243-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 41..97
e-value: 5.5E-34
score: 116.0
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 45..81
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 37..97
e-value: 6.0E-29
score: 317.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 43..97
score: 29.311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..121
NoneNo IPR availablePANTHERPTHR31992:SF69SUBFAMILY NOT NAMEDcoord: 162..213
coord: 1..134
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 162..213
coord: 1..134

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20243Carg03264Silver-seed gourdcarcarB330