Carg20240 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20240
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tetraspanin
Location	Cucurbita_argyrosperma_scaffold_131 : 53146 .. 55857 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACCAGCAACCATTTGATTGGATTACTTAACTTCCTCACTTTCGTCCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTAAGTACTCAAGCCAACAGTACAGAGTGTCTCCGATTCCTCCAGTGGCCGTTGATCATAATCGGAGTTGCTATCATGGTCGTTTCTCTGGCTGGATTCGCCGGCGCGTGTTACCGGAACACTTTTTTGATGTGGTTATACCTATTCGTGATGTTCTTTGTTATCGTTGCTCTGATTGTGTTTATTGTCTTCGCTTATGCCGTCACTGATAAAGGATCCGGCCGGACGGTTCCGAGTAGGGCGTATTTGGATTACTATCTTCAAGATTATTCCGGTTGGTTGAAGGATCGAGTTGCGGAAGAGAGCTATTGGGGGAAAATTAGTTCGTGTATTAGGGATTCTAGGGTTTGTCGGAAGATGGGAAGAACTGTTGGAGGTGTTCCTGAGACTGTTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGGTATTGTTCTGAAGAATTTGTTTGTTTGATGTTCTTCATTTGATTTCCCCTGTTTTTTGATTTGTTTATACCTTTTTGGATCTGAAAAAAGTTGAAACCAGAGGGAACAGAATAGGATTGGAAAGGCACTTTTAGATAGCTTTGATTGATTTAAGGTTTCTAATATTAAATGGTAAAGCTCAACCCAGTGGGGTTGGCCTAATTGAAAGAGTTTATTGTTCTTGCACATCTGTTTCTGTGGTGGAGGCTTTGAACTTCCATTATCTTTAGATCTCCCAACAGTTCCCCAAGATTAGGATGACTGAATCATTTAGAAGAGGTAGGTGCGTCCTTTCCGGTCTTCTCGTCCTAGGGAAAGGTTCTCTAAATGATCTAATGCCTACACCGGATATGGACCGAACTGTCTTACGATAGTCTGAACCCAGCTCACGTATCACTTTAATGGGCAAACAGCTCAACTCTTGGAACATACTATAGCTCCAAGTGGCGAAGAGTCGACATCGAGGTGCCAAACCTTCTTGTCGATGTAGGCTAATGAAATAAACTTGTTTCTTATAGACTATTTCCTGCTGTTCCAACCTGTATGATCTGGCTGGCGGTTGCTCGTCGTGCTTGCTTCGAGAAAAAGACGAATCAAAATTAGAAAACCCATTTAGGATTTGGGGTGAAAAGCTTTTTCCCTGAACTTTTTGTATATTCTAGAATTGATGGTGAGGCTTTTCTCTTCCTTTGAAAGGTCACCTTGTTGCTTTTCTGTATTCTTCTGTGATAGCTGTGTTTGCTGAACTTTAAAGTTGTTTGTATTTTGAAGTTGCTTCAACCTTAGAACATCCTCTTCTTTTAGTGGGCATATTCTTTTGCTTTGTATATTGGATTAGAGTAGAAGACAAAGCCATCGGGTGAAGTGTAACCGCTCAAGAGCAGATATTGTTCGTTTTAACTCGTCAACCTCACGATTTTAAAATGCATCTACTAAGAAAAGGTTTCTGTACCGTTATAAGGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCATAATCCACCCCCCTTAGGGGCCAACGTCCTCGTTGGCACACCGTATCTGGCTCTGGTACCATTTATAACCACTCAAGCCCACCGCTAATAGATATTGTCTGCTTTAGCCTGTTAAGTACCATTGTCAGCCTCACAGTTTTAAAACACGTTTACTAAGGAGAGGTCTGGTACCATTTATAACCACTCAAGCCCACCGCTAGTAGATATTGTCTGTTTTAACCTGTTAAGTACCATTGTCAGCCTCACAGTTTTAAAACATGTTTATAGGGAGAGGTTGTCACACCCTTATAAGGAATGCTTCGTTCTCCTCTCCAACTAACGTGGGATCTCACATGAAGTAACTCCGAAACTTGATCAGTCATTTGACTGCTCAGTGTCGGGCTTTATATCATTTGTAATCGTCCAAGTCCACCGCCAACAGATATTGTCGGCTTTAGCCCTTTACGTACCACCGTTAGCCTCACGGTTTAAAACACGTCTACTAGGGAGAGATTTCCACCCCCTTATAAGAAATGATCTGTTCCCCTCTCTAACTAATGTGGGATATCACACCCTTACAATGAATGCTTTGTTCCCCTCTCTAACCAAAGTGGGATATCACATAAAGTAACTCGGAAACTTTATCGGAAAAGAGGCGGAGGGAATCTTATAATATTCAATAATTTAGCATCTTCCTCGTGAATTGGTTCTGCTGTTTATAAAAACCTTGACTTTTAATATTAACTTTTGCACCTAATGCTTGTTTTTTGCTACTAGCAAGAGTAATAAATCTGTTCTTTCTAGAGTCTAAACGTTTTAAATTTTGTTTGTTCAGTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAACGAGACTGTCTGGACTGGTTTTGAAGGGATGGTGCTTGTCAATCCCGACTGCACGAAATGGAACTCCGATCAAACGCTGCTCTGTTACGACTGCAACTCGTGTAAAGCAGGCGTGCTGGCCAGCGTCAAGAGGAGCTGGAGGAAGGTCTCTGTGATCAACATTGTTGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAATCGACGCATCGATAATGAAGAACCCTCCGGGGAAGCCCGGATGGAAAAGGCACGACCGAGCTGGATTCATTCTTAG

mRNA sequence

ATGAGAACCAGCAACCATTTGATTGGATTACTTAACTTCCTCACTTTCGTCCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTAAGTACTCAAGCCAACAGTACAGAGTGTCTCCGATTCCTCCAGTGGCCGTTGATCATAATCGGAGTTGCTATCATGGTCGTTTCTCTGGCTGGATTCGCCGGCGCGTGTTACCGGAACACTTTTTTGATGTGGTTATACCTATTCGTGATGTTCTTTGTTATCGTTGCTCTGATTGTGTTTATTGTCTTCGCTTATGCCGTCACTGATAAAGGATCCGGCCGGACGGTTCCGAGTAGGGCGTATTTGGATTACTATCTTCAAGATTATTCCGGTTGGTTGAAGGATCGAGTTGCGGAAGAGAGCTATTGGGGGAAAATTAGTTCGTGTATTAGGGATTCTAGGGTTTGTCGGAAGATGGGAAGAACTGTTGGAGGTGTTCCTGAGACTGTTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAACGAGACTGTCTGGACTGGTTTTGAAGGGATGGTGCTTGTCAATCCCGACTGCACGAAATGGAACTCCGATCAAACGCTGCTCTGTTACGACTGCAACTCGTGTAAAGCAGGCGTGCTGGCCAGCGTCAAGAGGAGCTGGAGGAAGGTCTCTGTGATCAACATTGTTGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAATCGACGCATCGATAATGAAGAACCCTCCGGGGAAGCCCGGATGGAAAAGGCACGACCGAGCTGGATTCATTCTTAG

Coding sequence (CDS)

ATGAGAACCAGCAACCATTTGATTGGATTACTTAACTTCCTCACTTTCGTCCTCTCAATCCCGATCCTCGCCGGCGGGATATGGCTAAGTACTCAAGCCAACAGTACAGAGTGTCTCCGATTCCTCCAGTGGCCGTTGATCATAATCGGAGTTGCTATCATGGTCGTTTCTCTGGCTGGATTCGCCGGCGCGTGTTACCGGAACACTTTTTTGATGTGGTTATACCTATTCGTGATGTTCTTTGTTATCGTTGCTCTGATTGTGTTTATTGTCTTCGCTTATGCCGTCACTGATAAAGGATCCGGCCGGACGGTTCCGAGTAGGGCGTATTTGGATTACTATCTTCAAGATTATTCCGGTTGGTTGAAGGATCGAGTTGCGGAAGAGAGCTATTGGGGGAAAATTAGTTCGTGTATTAGGGATTCTAGGGTTTGTCGGAAGATGGGAAGAACTGTTGGAGGTGTTCCTGAGACTGTTGAAATGTTTAATCTCAGGAAGCTCAGCCCTATTGAGTCTGGTTGCTGTAAGCCTCCTACAGATTGTGGCTTTGTCTATCAAAACGAGACTGTCTGGACTGGTTTTGAAGGGATGGTGCTTGTCAATCCCGACTGCACGAAATGGAACTCCGATCAAACGCTGCTCTGTTACGACTGCAACTCGTGTAAAGCAGGCGTGCTGGCCAGCGTCAAGAGGAGCTGGAGGAAGGTCTCTGTGATCAACATTGTTGTCTTGATCATTCTGGTGATTGCTTATGTCATTGGCATTGCAGCATTCAGGAACAATCGACGCATCGATAATGAAGAACCCTCCGGGGAAGCCCGGATGGAAAAGGCACGACCGAGCTGGATTCATTCTTAG

Protein sequence

MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAGFAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSGWLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTDCGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVINIVVLIILVIAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS

Homology

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BLAST of Carg20240 vs. NCBI nr
Match: XP_022948055.1 (tetraspanin-3-like [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 5.6e-159
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPET+EMFNLRKLSPIESGCCKPPTD
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETIEMFNLRKLSPIESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN
Sbjct: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
           IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS
Sbjct: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 285

[Close]

BLAST of Carg20240 vs. NCBI nr
Match: XP_023532275.1 (tetraspanin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.4 bits (1461), Expect = 2.8e-158
Identity = 284/285 (99.65%), Postives = 284/285 (99.65%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           C FVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN
Sbjct: 181 CDFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
           IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS
Sbjct: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 285

[Close]

BLAST of Carg20240 vs. NCBI nr
Match: XP_023007398.1 (tetraspanin-3-like [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD
Sbjct: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLAS+KRSWRKVSVIN
Sbjct: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASLKRSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
           I  XXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS
Sbjct: 241 IXXXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 285

[Close]

BLAST of Carg20240 vs. NCBI nr
Match: XP_004149556.1 (PREDICTED: tetraspanin-3 [Cucumis sativus] >KGN47296.1 hypothetical protein Csa_6G290280 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 2.3e-144
Identity = 259/285 (90.88%), Postives = 271/285 (95.09%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYW KISSC+RDS+VC+KMGR VGGVPE+VEMFNLRKLSPIESGCCKPP+D
Sbjct: 121 WLKDRVAEESYWEKISSCVRDSKVCKKMGRIVGGVPESVEMFNLRKLSPIESGCCKPPSD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGF YQNETVWTG EGMVL N DCT WN+DQ+ LCY+C+SCKAGVLAS+KRSWRKVSVIN
Sbjct: 181 CGFSYQNETVWTGVEGMVLFNSDCTNWNNDQSELCYNCDSCKAGVLASLKRSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
              XXXXXX YVIGIAAFRNNRRIDNEE SGEARMEKARPSWIHS
Sbjct: 241 XXXXXXXXXXYVIGIAAFRNNRRIDNEEASGEARMEKARPSWIHS 285

[Close]

BLAST of Carg20240 vs. NCBI nr
Match: XP_008463907.1 (PREDICTED: tetraspanin-3 [Cucumis melo])

HSP 1 Score: 519.6 bits (1337), Expect = 6.6e-144
Identity = 259/287 (90.24%), Postives = 274/287 (95.47%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+IVALIVF+VFAYAVTDKGSGRTVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIVALIVFVVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYW KISSCIRDS+VC+KMGR VGGVPE+VEMF+LRKLSPIESGCCKPP+D
Sbjct: 121 WLKDRVAEESYWEKISSCIRDSKVCKKMGRIVGGVPESVEMFSLRKLSPIESGCCKPPSD 180

Query: 181 CGFVYQNETVWTGFE--GMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSV 240
           CGF YQNETVWTG E  GMVLVN DCT WN+DQ+ LCY+C+SCKAGVLAS+KRSWRKVSV
Sbjct: 181 CGFAYQNETVWTGVEGTGMVLVNSDCTNWNNDQSELCYNCDSCKAGVLASLKRSWRKVSV 240

Query: 241 INIVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
           INI  XXXXXXAYVIG+AAFRNNRRIDNEE SGEARMEKARPSWIHS
Sbjct: 241 INIXXXXXXXXAYVIGLAAFRNNRRIDNEEASGEARMEKARPSWIHS 287

[Close]

BLAST of Carg20240 vs. TAIR10
Match: AT5G60220.1 (tetraspanin4)

HSP 1 Score: 390.6 bits (1002), Expect = 8.4e-109
Identity = 191/275 (69.45%), Postives = 221/275 (80.36%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MR+ ++LIGL+NF TF+LSIPIL GGIWLS++ANST+CLRFLQWPLIIIG++IMV+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
            AGACY+N FLMWLYLF MFFVI ALI F +FAY VTDKGSGR V +R YLDYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV +  YW  I SC+RDS VC+K+GR + GVPET  MF  R LSP+ESGCCKPPTD
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CG+ Y NETVW     MV  NPDC  WN+DQ LLCY C+SCKAGVL S+K+SWRKVSVIN
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARM 276
              XXXXXX      AA++N +R+ N+EP GEARM
Sbjct: 241 XXXXXXXXXXXXXACAAYQNVKRMYNDEPVGEARM 275

[Close]

BLAST of Carg20240 vs. TAIR10
Match: AT3G45600.1 (tetraspanin3)

HSP 1 Score: 364.0 bits (933), Expect = 8.4e-101
Identity = 183/284 (64.44%), Postives = 211/284 (74.30%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGL+NFLTF+LSIPIL GGIWLS++ANST+CLRFLQWPLI+IG++IMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRN FLMWLYL VM  +I ALI FI+FAYAVTDKGSGRTV +R YLDYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV+++SYWGKISSC+RDS  CRK+GR   GVPET +MF LR+LSP+ESGCCKPPTD
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGF Y NET W    GM+  N DC  W++DQ++LCY                        
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIH 285
              XXXXXX              IDN+EP+GEARM K+ PS  H
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXIDNDEPAGEARMTKSHPSHFH 284

[Close]

BLAST of Carg20240 vs. TAIR10
Match: AT2G23810.1 (tetraspanin8)

HSP 1 Score: 248.4 bits (633), Expect = 5.2e-66
Identity = 124/265 (46.79%), Postives = 166/265 (62.64%), Query Frame = 0


Query: 2   RTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAGF 61
           R SN+L+G+LNFL F+LSIPILAGGIWLS Q  STEC RFL  P+I +GV +MVV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLS-QKGSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  AGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSGW 121
            G+C R T+L+W+                VFA+ VT+KG+G  +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTDC 181
           L+ RV     W KI SC+ +S+VC K+      VP  V  F    L+ ++SGCCKP  +C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVINI 241
           GF Y N T WT        NPDC  W++ +  LC+DC SCKAG+L +VK +W+KV+++NI
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 VVXXXXXXAYVIGIAAFRNNRRIDN 267
           V        Y +G  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg20240 vs. TAIR10
Match: AT4G28050.1 (tetraspanin7)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 120/263 (45.63%), Postives = 166/263 (63.12%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           ++ SN+L+G+LNF TF+LSIPIL+ GIWL   A +TEC RFL  P++++G+ +M VS+AG
Sbjct: 2   VQCSNNLLGILNFFTFLLSIPILSAGIWLGKNA-ATECERFLDKPMVVLGIFLMFVSIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
             GAC R + L+WLYLF MF +I+    F +FA+AVT++G+G  +  R Y +Y++ DYS 
Sbjct: 62  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 121

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WL+ RV     W +I SC+  S VC         +   VE F    L+ ++SGCCKP  D
Sbjct: 122 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASI--NVEDFYKSNLNALQSGCCKPSND 181

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           C F Y N T WT   G    N DC  W++    LCYDC +CKAG+L ++K SW+KV+ +N
Sbjct: 182 CNFTYVNPTTWTKTPG-PYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVN 241

Query: 241 IVVXXXXXXAYVIGIAAFRNNRR 264
           IV        Y +G  AFRNNR+
Sbjct: 242 IVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of Carg20240 vs. TAIR10
Match: AT4G30430.1 (tetraspanin9)

HSP 1 Score: 244.2 bits (622), Expect = 9.7e-65
Identity = 115/262 (43.89%), Postives = 168/262 (64.12%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           +R SN L+G+LNF  F+LS+PIL+ GIWLS +A +T+C RFL  P+I +GV +M++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I+ ++ F +FA+ VT KGSG T+  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WL+ RV    +W  I SC+ +S+ C  +         TV  F    L+  ESGCCKP  D
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFESGCCKPSND 181

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           C F Y   T W    G    N DC  W++++  LCY+C +CKAG L ++K +W++V+++N
Sbjct: 182 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 241

Query: 241 IVVXXXXXXAYVIGIAAFRNNR 263
           I+        Y +G  AFRNN+
Sbjct: 242 IIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of Carg20240 vs. Swiss-Prot
Match: sp|Q9LSS4|TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-107
Identity = 191/275 (69.45%), Postives = 221/275 (80.36%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MR+ ++LIGL+NF TF+LSIPIL GGIWLS++ANST+CLRFLQWPLIIIG++IMV+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
            AGACY+N FLMWLYLF MFFVI ALI F +FAY VTDKGSGR V +R YLDYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV +  YW  I SC+RDS VC+K+GR + GVPET  MF  R LSP+ESGCCKPPTD
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CG+ Y NETVW     MV  NPDC  WN+DQ LLCY C+SCKAGVL S+K+SWRKVSVIN
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARM 276
              XXXXXX      AA++N +R+ N+EP GEARM
Sbjct: 241 XXXXXXXXXXXXXACAAYQNVKRMYNDEPVGEARM 275

[Close]

BLAST of Carg20240 vs. Swiss-Prot
Match: sp|Q9M1E7|TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.5e-99
Identity = 183/284 (64.44%), Postives = 211/284 (74.30%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGL+NFLTF+LSIPIL GGIWLS++ANST+CLRFLQWPLI+IG++IMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRN FLMWLYL VM  +I ALI FI+FAYAVTDKGSGRTV +R YLDYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV+++SYWGKISSC+RDS  CRK+GR   GVPET +MF LR+LSP+ESGCCKPPTD
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGF Y NET W    GM+  N DC  W++DQ++LCY                        
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIH 285
              XXXXXX              IDN+EP+GEARM K+ PS  H
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXIDNDEPAGEARMTKSHPSHFH 284

[Close]

BLAST of Carg20240 vs. Swiss-Prot
Match: sp|Q8S8Q6|TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.3e-65
Identity = 124/265 (46.79%), Postives = 166/265 (62.64%), Query Frame = 0


Query: 2   RTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAGF 61
           R SN+L+G+LNFL F+LSIPILAGGIWLS Q  STEC RFL  P+I +GV +MVV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLS-QKGSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  AGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSGW 121
            G+C R T+L+W+                VFA+ VT+KG+G  +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTDC 181
           L+ RV     W KI SC+ +S+VC K+      VP  V  F    L+ ++SGCCKP  +C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVINI 241
           GF Y N T WT        NPDC  W++ +  LC+DC SCKAG+L +VK +W+KV+++NI
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 VVXXXXXXAYVIGIAAFRNNRRIDN 267
           V        Y +G  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg20240 vs. Swiss-Prot
Match: sp|Q9SUD4|TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-64
Identity = 120/263 (45.63%), Postives = 166/263 (63.12%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           ++ SN+L+G+LNF TF+LSIPIL+ GIWL   A +TEC RFL  P++++G+ +M VS+AG
Sbjct: 2   VQCSNNLLGILNFFTFLLSIPILSAGIWLGKNA-ATECERFLDKPMVVLGIFLMFVSIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
             GAC R + L+WLYLF MF +I+    F +FA+AVT++G+G  +  R Y +Y++ DYS 
Sbjct: 62  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 121

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WL+ RV     W +I SC+  S VC         +   VE F    L+ ++SGCCKP  D
Sbjct: 122 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASI--NVEDFYKSNLNALQSGCCKPSND 181

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           C F Y N T WT   G    N DC  W++    LCYDC +CKAG+L ++K SW+KV+ +N
Sbjct: 182 CNFTYVNPTTWTKTPG-PYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVN 241

Query: 241 IVVXXXXXXAYVIGIAAFRNNRR 264
           IV        Y +G  AFRNNR+
Sbjct: 242 IVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of Carg20240 vs. Swiss-Prot
Match: sp|Q9M0B7|TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-63
Identity = 115/262 (43.89%), Postives = 168/262 (64.12%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           +R SN L+G+LNF  F+LS+PIL+ GIWLS +A +T+C RFL  P+I +GV +M++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I+ ++ F +FA+ VT KGSG T+  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WL+ RV    +W  I SC+ +S+ C  +         TV  F    L+  ESGCCKP  D
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN--HTVSDFYKEDLTAFESGCCKPSND 181

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           C F Y   T W    G    N DC  W++++  LCY+C +CKAG L ++K +W++V+++N
Sbjct: 182 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 241

Query: 241 IVVXXXXXXAYVIGIAAFRNNR 263
           I+        Y +G  AFRNN+
Sbjct: 242 IIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of Carg20240 vs. TrEMBL
Match: tr|A0A0A0KHN9|A0A0A0KHN9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290280 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.5e-144
Identity = 259/285 (90.88%), Postives = 271/285 (95.09%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYW KISSC+RDS+VC+KMGR VGGVPE+VEMFNLRKLSPIESGCCKPP+D
Sbjct: 121 WLKDRVAEESYWEKISSCVRDSKVCKKMGRIVGGVPESVEMFNLRKLSPIESGCCKPPSD 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CGF YQNETVWTG EGMVL N DCT WN+DQ+ LCY+C+SCKAGVLAS+KRSWRKVSVIN
Sbjct: 181 CGFSYQNETVWTGVEGMVLFNSDCTNWNNDQSELCYNCDSCKAGVLASLKRSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
              XXXXXX YVIGIAAFRNNRRIDNEE SGEARMEKARPSWIHS
Sbjct: 241 XXXXXXXXXXYVIGIAAFRNNRRIDNEEASGEARMEKARPSWIHS 285

[Close]

BLAST of Carg20240 vs. TrEMBL
Match: tr|A0A1S3CKC7|A0A1S3CKC7_CUCME (tetraspanin-3 OS=Cucumis melo OX=3656 GN=LOC103501918 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 4.4e-144
Identity = 259/287 (90.24%), Postives = 274/287 (95.47%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTFVLSIPILAGGIWLS++ANSTECLRFLQWPLIIIGVAIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+IVALIVF+VFAYAVTDKGSGRTVPSR YLDYYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIVALIVFVVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRVAEESYW KISSCIRDS+VC+KMGR VGGVPE+VEMF+LRKLSPIESGCCKPP+D
Sbjct: 121 WLKDRVAEESYWEKISSCIRDSKVCKKMGRIVGGVPESVEMFSLRKLSPIESGCCKPPSD 180

Query: 181 CGFVYQNETVWTGFE--GMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSV 240
           CGF YQNETVWTG E  GMVLVN DCT WN+DQ+ LCY+C+SCKAGVLAS+KRSWRKVSV
Sbjct: 181 CGFAYQNETVWTGVEGTGMVLVNSDCTNWNNDQSELCYNCDSCKAGVLASLKRSWRKVSV 240

Query: 241 INIVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIHS 286
           INI  XXXXXXAYVIG+AAFRNNRRIDNEE SGEARMEKARPSWIHS
Sbjct: 241 INIXXXXXXXXAYVIGLAAFRNNRRIDNEEASGEARMEKARPSWIHS 287

[Close]

BLAST of Carg20240 vs. TrEMBL
Match: tr|A0A1U8I0B4|A0A1U8I0B4_GOSHI (tetraspanin-3-like OS=Gossypium hirsutum OX=3635 GN=LOC107889246 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 4.6e-125
Identity = 214/284 (75.35%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTF+LSI IL GGIWLS++ANST+CL+FLQWPLI+IG +IMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSIVILGGGIWLSSRANSTDCLKFLQWPLIVIGASIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+I ALI FI+FAYAVTDKGSGR V ++ YL+YYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVLNKGYLEYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV +ESYW KISSCIRDS+VC KMGRT  GVPET +MF++RKLSPIESGCCKPPT+
Sbjct: 121 WLKDRVVDESYWAKISSCIRDSKVCSKMGRTFNGVPETYDMFSMRKLSPIESGCCKPPTE 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CG+VY NET+W    G+   N DC++W++DQ +LCY C+SCKAGVL S+K+SWRKVSVIN
Sbjct: 181 CGYVYVNETLWNSGSGLAATNLDCSRWSNDQQMLCYQCDSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIH 285
           IVV       YVIG AAFRNN++IDN+EP GEARM KA+PS IH
Sbjct: 241 IVVLILLVIFYVIGCAAFRNNKKIDNDEPYGEARMTKAQPSRIH 284

[Close]

BLAST of Carg20240 vs. TrEMBL
Match: tr|A0A0B0MNJ2|A0A0B0MNJ2_GOSAR (Tetraspanin-5 OS=Gossypium arboreum OX=29729 GN=F383_17893 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 5.9e-125
Identity = 214/284 (75.35%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTF+LSI IL GGIWLS++ANST+CL+FLQWPLI+IG +IMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSIVILGGGIWLSSRANSTDCLKFLQWPLIVIGASIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+I ALI FI+FAYAVTDKGSGR V ++ YL+YYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVLNKGYLEYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV +ESYW KISSCIRDS+VC KMGRT  GVPET +MF++RKLSPIESGCCKPPT+
Sbjct: 121 WLKDRVVDESYWAKISSCIRDSKVCSKMGRTFNGVPETYDMFSMRKLSPIESGCCKPPTE 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CG+VY NET+W    G+   N DC++W++DQ +LCY C+SCKAGVL S+K+SWRKVSVIN
Sbjct: 181 CGYVYINETLWNSGSGLAATNLDCSRWSNDQQMLCYQCDSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIH 285
           IVV       YVIG AAFRNN++IDN+EP GEARM KA+PS IH
Sbjct: 241 IVVLILLVIFYVIGCAAFRNNKKIDNDEPYGEARMTKAQPSRIH 284

[Close]

BLAST of Carg20240 vs. TrEMBL
Match: tr|A0A2P5YDM3|A0A2P5YDM3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA06950 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 7.8e-125
Identity = 214/284 (75.35%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSTQANSTECLRFLQWPLIIIGVAIMVVSLAG 60
           MRTSNHLIGLLNFLTF+LSI IL GGIWLS++ANST+CL+FLQWPLI+IG +IMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSIVILGGGIWLSSRANSTDCLKFLQWPLIVIGASIMVVSLAG 60

Query: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRAYLDYYLQDYSG 120
           FAGACYRNTFLMWLYLFVMFF+I ALI FI+FAYAVTDKGSGR V ++ YL+YYLQDYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVLNKGYLEYYLQDYSG 120

Query: 121 WLKDRVAEESYWGKISSCIRDSRVCRKMGRTVGGVPETVEMFNLRKLSPIESGCCKPPTD 180
           WLKDRV +ESYW KISSCIRDS+VC KMGRT  GVPET +MF++RKLSPIESGCCKPPT+
Sbjct: 121 WLKDRVVDESYWAKISSCIRDSKVCSKMGRTFNGVPETYDMFSMRKLSPIESGCCKPPTE 180

Query: 181 CGFVYQNETVWTGFEGMVLVNPDCTKWNSDQTLLCYDCNSCKAGVLASVKRSWRKVSVIN 240
           CG+VY NET+W    G+   N DC++W++DQ +LCY C+SCKAGVL S+K+SWRKVSVIN
Sbjct: 181 CGYVYVNETLWNSGSGLAASNLDCSRWSNDQQMLCYQCDSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVXXXXXXAYVIGIAAFRNNRRIDNEEPSGEARMEKARPSWIH 285
           IVV       YVIG AAFRNN++IDN+EP GEARM KA+PS IH
Sbjct: 241 IVVLILLVIFYVIGCAAFRNNKKIDNDEPYGEARMTKAQPSRIH 284

The following BLAST results are available for this feature:

BLAST of Carg20240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948055.1	5.6e-159	99.65	tetraspanin-3-like [Cucurbita moschata]	[more]
XP_023532275.1	2.8e-158	99.65	tetraspanin-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007398.1	1.4e-157	98.95	tetraspanin-3-like [Cucurbita maxima]	[more]
XP_004149556.1	2.3e-144	90.88	PREDICTED: tetraspanin-3 [Cucumis sativus] >KGN47296.1 hypothetical protein Csa_...	[more]
XP_008463907.1	6.6e-144	90.24	PREDICTED: tetraspanin-3 [Cucumis melo]	[more]

BLAST of Carg20240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60220.1	8.4e-109	69.45	tetraspanin4	[more]
AT3G45600.1	8.4e-101	64.44	tetraspanin3	[more]
AT2G23810.1	5.2e-66	46.79	tetraspanin8	[more]
AT4G28050.1	1.1e-65	45.63	tetraspanin7	[more]
AT4G30430.1	9.7e-65	43.89	tetraspanin9	[more]

BLAST of Carg20240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LSS4\|TET4_ARATH	1.5e-107	69.45	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
sp\|Q9M1E7\|TET3_ARATH	1.5e-99	64.44	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
sp\|Q8S8Q6\|TET8_ARATH	9.3e-65	46.79	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
sp\|Q9SUD4\|TET7_ARATH	2.1e-64	45.63	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
sp\|Q9M0B7\|TET9_ARATH	1.8e-63	43.89	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]

BLAST of Carg20240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHN9\|A0A0A0KHN9_CUCSA	1.5e-144	90.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290280 PE=3 SV=1	[more]
tr\|A0A1S3CKC7\|A0A1S3CKC7_CUCME	4.4e-144	90.24	tetraspanin-3 OS=Cucumis melo OX=3656 GN=LOC103501918 PE=3 SV=1	[more]
tr\|A0A1U8I0B4\|A0A1U8I0B4_GOSHI	4.6e-125	75.35	tetraspanin-3-like OS=Gossypium hirsutum OX=3635 GN=LOC107889246 PE=3 SV=1	[more]
tr\|A0A0B0MNJ2\|A0A0B0MNJ2_GOSAR	5.9e-125	75.35	Tetraspanin-5 OS=Gossypium arboreum OX=29729 GN=F383_17893 PE=3 SV=1	[more]
tr\|A0A2P5YDM3\|A0A2P5YDM3_GOSBA	7.8e-125	75.35	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA06950 PE=3 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin
IPR000301	Tetraspanin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20240-RA	Carg20240-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000301	Tetraspanin	PRINTS	PR00259	TMFOUR	coord: 66..94 score: 13.72 coord: 6..29 score: 27.84 coord: 39..65 score: 28.37
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspannin	coord: 6..252 e-value: 4.2E-31 score: 108.4
None	No IPR available	PANTHER	PTHR32191:SF7	TETRASPANIN-3-RELATED	coord: 2..273
None	No IPR available	PANTHER	PTHR32191	FAMILY NOT NAMED	coord: 2..273

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20240	Cla000544	Watermelon (97103) v1	carwmB0302
Carg20240	Csa6G290280	Cucumber (Chinese Long) v2	carcuB0336
Carg20240	MELO3C025741	Melon (DHL92) v3.5.1	carmeB0307
Carg20240	ClCG02G020890	Watermelon (Charleston Gray)	carwcgB0299
Carg20240	CSPI06G16190	Wild cucumber (PI 183967)	carcpiB0342
Carg20240	Cucsa.052700	Cucumber (Gy14) v1	carcgyB0355
Carg20240	CmaCh02G008700	Cucurbita maxima (Rimu)	carcmaB0425
Carg20240	CmoCh02G008690	Cucurbita moschata (Rifu)	carcmoB0421
Carg20240	Lsi10G012970	Bottle gourd (USVL1VR-Ls)	carlsiB279
Carg20240	Cp4.1LG02g12650	Cucurbita pepo (Zucchini)	carcpeB0427
Carg20240	Cp4.1LG05g08720	Cucurbita pepo (Zucchini)	carcpeB0429
Carg20240	CsGy6G015710	Cucumber (Gy14) v2	carcgybB0320
Carg20240	MELO3C025741.2	Melon (DHL92) v3.6.1	carmedB0317
Carg20240	CsaV3_6G021560	Cucumber (Chinese Long) v3	carcucB0341
Carg20240	Cla97C02G046920	Watermelon (97103) v2	carwmbB0315
Carg20240	Bhi10G000481	Wax gourd	carwgoB0392

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20240	Silver-seed gourd	carcarB185
Carg20240	Silver-seed gourd	carcarB330
Carg20240	Silver-seed gourd	carcarB332
Carg20240	Cucumber (Gy14) v2	carcgybB0318
Carg20240	Cucumber (Gy14) v1	carcgyB0358
Carg20240	Cucurbita maxima (Rimu)	carcmaB0427
Carg20240	Cucurbita maxima (Rimu)	carcmaB0428
Carg20240	Cucurbita maxima (Rimu)	carcmaB0429
Carg20240	Cucurbita maxima (Rimu)	carcmaB0422
Carg20240	Cucurbita maxima (Rimu)	carcmaB0424
Carg20240	Cucurbita moschata (Rifu)	carcmoB0418
Carg20240	Cucurbita moschata (Rifu)	carcmoB0420
Carg20240	Cucurbita moschata (Rifu)	carcmoB0422
Carg20240	Cucurbita moschata (Rifu)	carcmoB0423
Carg20240	Cucurbita pepo (Zucchini)	carcpeB0423
Carg20240	Cucurbita pepo (Zucchini)	carcpeB0424
Carg20240	Cucurbita pepo (Zucchini)	carcpeB0430
Carg20240	Wild cucumber (PI 183967)	carcpiB0338
Carg20240	Wild cucumber (PI 183967)	carcpiB0340
Carg20240	Cucumber (Chinese Long) v2	carcuB0332
Carg20240	Cucumber (Chinese Long) v2	carcuB0334
Carg20240	Cucumber (Chinese Long) v3	carcucB0339
Carg20240	Bottle gourd (USVL1VR-Ls)	carlsiB282
Carg20240	Melon (DHL92) v3.5.1	carmeB0305
Carg20240	Melon (DHL92) v3.5.1	carmeB0310
Carg20240	Melon (DHL92) v3.6.1	carmedB0319
Carg20240	Watermelon (Charleston Gray)	carwcgB0297
Carg20240	Watermelon (97103) v1	carwmB0297
Carg20240	Watermelon (97103) v2	carwmbB0313
Carg20240	Wax gourd	carwgoB0391