Carg20176 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20176
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribonuclease J
Location	Cucurbita_argyrosperma_scaffold_154 : 45112 .. 55885 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGCCCGATATCCGTGAGAGTCGAAGAAAAATCTTTAGCCCGCTATCTCCCTCCATTTCCCGCTCCGAGGCTCTGCAGCTACCATTTCGAGTTCACTCCGGAACCTCCCCAGCATATGCAATTGGAGTTTTTGGGCGGTTCTTCCGTCCTCAGGTCGCCACATTTGGGTCCTTACAGGCACACGATGGCAGCCTTTGGTGCTCTTTCACTATGTCCCTGCAGCCCTCTGCCACGCCCACGTACCATTTATTGTTACAGTGGTACTCCTAAAGTTTTAGGTACATATTTTTTTTTTTAAAAAAATTGAATTACAGATACTGCTGCTAGTTGCTATGCTCAGCTCTTGTTCACGAGAAGGTTGCAGAAAGAAGTTAGAAGATAGACTTATTATCGCTCATAGAATTGACCTCATGGAATTTTGGCAAGTTTTAGAACTAAGCTTAACGATATTGTCCGGGTTATTTTTACTACGTCTTGAAACATGCTAACTGGTTTACTGGACTTGGAATGGAGTTTCTGGCATTTGAGTTATTTGAGTCATGTGGATAACATTGCAACATGCAAGGGAAGTTTGAATCAAGACGTATGATATTTATTTGGCTGGCCTGTTGGAGTGTGAAACGTAGGAAAGTGAAGAGAGAAAAGAATTTTGTTTGATGTTGTGAGATCCCACATCGGTTAGGGTGGTGAACGAAATATTTTTTATATGTGTGTGGAAACCTCTCCCTAGTAGACATGTTTTAAAAGCCTTGAGGGGAAGCCCGAAAGGAAAATTTCAAAGAGTATAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATAGAGCCAGGCACCGGGCTATGTGCCAACAAGGAGGCTGAGCCCCAAAGGGGGTGAACACGAGGCAGTGTGCTAGCAAGGAGGTTGGGCCCCGAATGGGATGGATTGTGAGATCCCACACCGATTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATGTGTTTTAAAAACTCAAGGGGAACTTCAAAAGAGAAAGTGCAAAGAGGATAATATCGGCTAGTGTGAGCTTGTGGGGTTACAGATATTCTAGGTTACATTCAACAACCATACCAATTTTAGTGCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGTGACGGTTGTCATAGTCAACAATGTTAACACTTCTAGGAACTCTTCTCCATTGTCAATGTACTTTTTTTCTTTTTCCTTTCTGAAATTGTGAAATGCCATTTTAATGTTGCATTTATTTAGGCAATAATGTCTCTAGAGTACACCGCAAAAGACCGGGAAGATTAGAAGGTGCTAGAAAAAGCATGGAAGATTCTGTTAAACGCAAGATGGAACAGTTTTATGAAGGTTCAGATGGTCCGCCCCTCCGTGTTCTTCCAATTGGCGGCCTTGGTGATCTAATTCCTAAGACATACTATGTTTTCCCCTAAATACCAGATATTCTTAATTTCTCAGGTTTTTATGATTGGCATCTTTATAACACATTATTATGGAAATTTTGTTGGAGAGATTATAGGATTTTCAAGGATAAAGCTAATAATTAAATGTCATCCTGTTTCTTAACAAATTGTTTTTTCAATGATAAAGCCAGATATTGGGAGGAGGTGGTAGAAAAATAACCACTTTCATCTACTCTTTGGATACTATCTATTGTAATTAATACTGGCAATGTTTATAATTAACATCAAAAGGAAATAATTTCCATGCATACACGCATGACAAAACAATTTGTCTTAGATACTGGTATACATTAGCCATAAGATATTATTTCTTTATGTAATATTGTTTGTGTGTTCTATGAACCTTTAGAATTATGGTTTTAACTTCTTTATTGTACATTGAGACGAATAAACGTTTCTGCAATTCTCAGAGAATAAGTTCAAGCCACTCAGAATGTCTTTATACCGGAATTTTGGTTAAATTGTAATTCTGTCCCTTGTATTTCACCACTTTTATTTTCCTGTAGAGCTATATCAGGGACTAAATTCATGCATTTATGGAAGTGAAGAACTAAAATGAAATAAATGGACGATAGGGACCATTACCCCAAAAATTGTAAAATTTAACTTTTAACTTTATATCTACATGCTCTTTGTGGGATAGTTTTTTGATCTTAACTTTCTCTATGTTATTATATATTTTTTGTTTTTCACATGCATCAGTCCTGTCTGATCAGGTAATTCCAGCTTTGGATTCCCATACACCAATTTACGCTTCATCCTTTACAGTGGAGGTATATCACTACTTCAGCATATTGAAATTTTCATCATTCTAAGTATTTGCGTTTTTAACATCAAATGCAACTCTTCATCCTGTTGAATTTTGATATTACTTGTCAATTGAAATTATTGACCTCACGCTGCATATTTAGTTTTTAAATTATTACACTCCTACTAGGAGATGGGACATTGTACAATAGTAATGATTTTAAACTAAAATGTAAAGATCAAGAGTTCAATCCTGTTTTATCTCTAGTTATTTCATCAACGTGGTGCTTGCTTGTCATTTGTGGCATGACTGTTCTTCCTTGGCAGCTAATAAAAAAGCGTCTGAAGGAAAATGGGATTTTTGTTCCTTCTAGACTTAAGGTGTTTAAGATGAGAAAGAGATTCACAGCTGGGCCATTTGAAATAGAGCCAATTAGGGTTACCCATTCCATTCCTGATTGTTGTGGATTGGTTCTTCGATGTGCTGATGGTACAATTCTTCATACTGGAGACTGGAAGGTAAGACTGTTTGATGCAGTATCTCATTGTTGTTTGTTTCTTTTACGACTACTTGAGGAGGTGATATCTTGCAGATTGATGAGTCCCCATTGGATGGTAAAGTCTTTGATCGAGAAACTTTGGAAGAATTATCAAAAGAAGGAGTTACTCTCGTAAGCCAATTCTTGTCCTCGTCCAGTATATATAAAATCTAAACCTCTGGCCACAAAATGTTTACCGAAACTTTTGATTCATGCATATTTTTGTGACTTCAGCTAGTTTCAAAGCCATCTAATTTATGCCTAGGAGAAATGGGCCTTTTCTTTTTTGAAAATTTGGTTTGTTATTAGCAGGAATTAACTTGTTACTTGGCATGCAACGAACATGGTCGAAATATGAAACTTTGTAAAATATATGTGAATTACTTTTCAGATGATGAGTGACTCAACAAATGTACTATCTCCTGGAAGGACGATTAGTGAGTCTGTGGTGGCAGATGCTCTTTTAAGACGTATCTCTGCAGCTAAAGGAAGGGTCATCACGACTCAATTTGCTTCAAATATACACCGCCTTGGAAGTGTGAAAGCAGCCGCTGATTTAACTGGTAGAAAGTTGGTGAGTTTTTCATAGTTAGATTCCTTTATTCTCTTATGATTTTCCATACATAAAAGTAAATTGCTTCTCACGGTGGCATTTATGTCTTCTTTTGCAAATTTTTATGATTATTAGGTATTTGTTGGGATGTCTTTAAGGACATATCTGGAGGCAGCCTGGAAGGATGGAAAGGCACCAATTGACCCATCGACCTTGGTAGTCATTTATAAATTTTATTTTCACCCTGATATGTTTTCTATTTTAAAATTCAATTTGACATTTAGTTTTTCCTTGATAAGTGACCTTATTGATATTCGACTATCGACAGAAATGAAATCTTAGAAAAAACCCTTTTAACTTTTTTGAAATAGAAACAATTTTTTTTCAATGAAATAATGAAAAGAGCCTAAGGCTCTAAAGATACAAAACTTCGTAGAGGGATGAAAAGAAACCACTAAGAATGATGTAAATAACAATCCAAATAGCACTACATCCTCTTCAACAAAGAGCCTAAAATAATTATCCAATCAAAACATCAAAATAAAAGCCAAGAACGTTGAACTCCAAGCAAAAGAGAGTGACAGAAGAAGGAAGAGATTTGACAACTAAGAAAAATCCTTTATGCACATTTGATCTGAAGTTAAATTTCAGAAAAAGAGGAGATATGACGATTGAGAACCAACTCAAATATGCCCAACAAAATAAAACTCAAATATGCCCAACAAAATAAAACTCAAATATGCCCATGGTTGCAAGTTGAATCATGGTGTGACATGATCTAAGAAGGTGGGATCGCAACAGTTTGTACTTTTGTATATTTATTTATAATTGGAAGTCTTTTTTTTTCTCTTAGAAAGAGTCTTGCATATTGATCCATGGGAATGTGTTTTTTCTCACGTGATGTTGTGACATAAAGACCATTGATGTTCATGCATTTATTGATCGAGTCTATTCAAGGGAGTGGCGGCTTTAGAAGATATTCTGAAGATGTTCCTTTTAAATAAAAATGTGAAGTTCTACAGGTCACAGGAGAATTTGCCATTATGTGGGAAATATGGTTAAAGAGAAATAAGTAAACCTTTGAAGTTTAAAGCCTTCATGTGCGTAATACCTCGACAGATCTGAATTTTAGCTTCTTTTATCTTTCACTTGTTAAAGATTTAGACATTGACGTGTCTTTCTGTGATCCATGTTTTTGTTTTGCCTTGGTATGCTCCACTGCCTTGGACTGGTTTATCTGAATGAAAGCCAGTTTCTTATTTAACATTAGGGGCTTCAAACATAATCCTCATTGCCATTAGATGGTCTTTAAGGAGTATAACTGTGGTATTACAACTTGTGATGTTTTATGAATCTGTGATTAAAGAATTACTGCTGAGTATAAGCGAACAGCTATTATTCATAATGGCCATGCTTCTTCTTAATGTTCGGAAGTGGTGCGCATTACTATTATTGTTGGCTTATTGCTAATGCTTACTATGGAATATTTTTCATGAATTTTACTGGACTCTGAGTTGCAACGCTGGTTTTGAATTCCTAGGAGAACATGAAATTATGTATGGGCATGCATGTAGAATCATGCTTTCAGCTGTTATTCTTAACTATTCCACATATTTTATAGGTTTTAAGTGTGCGTATTCATCTAATTGTAACAATTCTCATCCTACAACTGATAAGGTAAAAGTGGAGGACATTGAAGCCTATGCACCAAAAGATTTATTGATTGTCACAACTGGCTCACAAGTAAGTTTGCCTACATGCCTATAGGAATTGGTGGTTTAATGGATTTAATACTTTAGTCACATCGATTTAGCAGTATCATTGTGCATGCTACTGTGTCAGGCAGAACCACGTGCTGCCCTAAATCTTGCATCGTATGGAAGTAGTCACTCTCTCAAACTGAGCAAGGAAGATATGATTTTGTATTCGGCCAAGGTAATAAAACAAGATTTTATTTATTCATACCAATTATCAAATAATCTTTATGTGATTCAAATTTATAGTTATATTTTCTGTGTCATAGACTCATATATTCAACCCACAATGTCAAGTTGTCTCATCAGTTGTTTTGGATTTACAAAGATTTTAGTAATTGCTGTTCCTCTCTAGCCTATTGACGTATCCTTTGCTTATTTTGTGATCACCTGAAATTAATACAGAACTACGAGGAATCTTTATTTGCAAGTCTTATGATGCACTTTATCGTTTGAGAAATTGAAATATCAAATTATTTTACACCCTGATTTGAGAAGAAAAAACCAACGCATATTTGTGTATTTTCTTCTGTTCCCTCCACTTTAATTTTCTTCTCTCGTTTCTTATAAAGAAATAATAATAAAAATAAAGTTCTTTAATCTCTCCAAAAAAAACTGTACCTCATGTTGGTCATCTTCGTTATTAGCAAATAGAGGTAGCTAGTTTGTTTGCCATATGTGGGGGTGATTAGGGGATTTGGCAAGTCTTGAGATTAATTGTGGGAGAGAGTACCCTCTCAAAAAGTGATCGACTATTCTCCATTAACATAGATTTCTTAAATTTCATTCTATGTTTCTGGTTCCTATCATCATCTCGCCAATATTTTACTATGGTTTCATTTATTTATCATATATTAAGTTACTACTAACGTTTTCTTTTGAACAATACCTTCTATGTTGGCCTATTTGAACAATTTTGAACTGCTGAACTTACATTTCTAAGTTCTTAAACGATTTGACATCAGCTTTAGGTCTACTGGCTGCCATTGATGTTTTTCAGGCAATGTATTGTATAATAGTTCTTTTCCCTCTTCTCATGCGACAGGTTATTCCTGGTAATGAATCTAGAGTGATGAAAATGTTGAACCGTATATCAGAGATTGGATCAAATATAATCATGGGCAAGAATGAGTTGCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGTTAGTTTCCATTATAATTGCATCCGAATATGTCAATTTTAAATCTCTTTTGGGACTTTGGACTTATGATTATCTCAGCCTTCTTGCTTTGAACTACAGATTCCCCTGCCTCCTATCTCGGTTTGTAGATGTATGCCTTTAGGCATATTTGGAAATTATTTTGAAAGGATTAAAAATCACTTTTTTCGTATTCAAAATCACTTTGAAGTGTTTTTAATCCTGAAAATCAATTCTTATGGAAGGAAAATTATGTGTAGAAGTGTTAACTTAAACACTAAGTTTATTTTGAAGGATTAAAGATATGTTTTGGATAAGAGTAGTTTTGAACTCGAAGAAAGTGATTTTGACCCTTTCAAAACCACTCTCATACATGTCTTTAGATTTGTGGAATGTCTTGGTATAGATGATTAGATTTTGTTTACCTTTTTCCTTTTTTTCCGTTACCTGATATTTTGGAACCTAATTTCTTATTAGGTATTGGTTTAAGCTGATATTCGATTAGCCTTCATGTCTATGTCATGGTCATCCATCCCAAACTTCCCCCATTTTTGCCTCAAAATAGTTTTCTTCTTAGCACCTGTTTGATTTCATCCATCTTGGTTCCTTCATCTGTCTCTTATGTTTGAAAAATGGGATTCTTTGTGTTTGAAGGAGGAAATACTACAAATTGTTAAACCGCAGCATTTTTTACCCATTCATGGAGAGCTTTTATTCCTTAAGGAGCATGAGCTGCTGGGCCGGTCGACAGGCATTCGACACACAACTGTGAGTATTTTCCTATCCACAATTGTGATACTTTTTGATAGGATAAGTTATGTTATGCAGAAATTGGCCGGTCAATAACATTTCTCTAAATTTACCTGTTTACCCTGGACCTATCATCACCAATATCCTTGCCAACGGACTAAAAATAATTGTTCCTCCTACAGTATCTCCGAAGTCCTTGATGAAAGATCATAAAAGGGAAAAAAGGGTTTCCTGTCAGTCACCAAATTCCATTGCCCTTCATGGAGGAAAACAAATTGTTGACTCTTGATTTATGTATAATCAAATTATTAACATTTGGAAAAAAAAAAAAGAAAAAAAGAAAAACAAAAAGAAAAAGGGTATAGTCCTGACTCGTGAAGTTAGAACTTGACAAGGTCTTTGGTGAGGTTGGAGTTTCTTTGACGTCATCTTGAAGCCAAAGTGTTCAGCCGATGTTGGAGGGGTTGAATTGAAGTCTTCTCTCTAATGCTTATTATTCCGTAATTTTGAACCAATTCTCCTCCCAACTCAAATGCTGCAAACACGTAGTTTGCTTCTAAGAGTTTGAAAATGACACACTAAAAGACAGTGAAAATATATGCTATTTTCTTATCTGAGCTACAATGAACCAGCTGCACTTCTCCTTCCTTGATGAAGTTGATTGGAGTCTCTTCGACATCATTCTTGAAGCTAAATCATTCAACTAATGTTGGAGGAGTTGGATTGAAGGCTTCTATCTACTGCTTGTTATTCCAAATTTTGATTCGGTTCTCCTCCGGACTGAAATGCTGCAAACACCTAGTTTGCTTCTAAGAGCTTGAAAACAACTAACACTAGAAGACTTATTGAAGATATCCACCATTTGCTTATCTGTGTTAGAGTAAACCAGCTGCTCTTCTTCTTCCTTTTGCATGTCTTTCAGAACAATAATACTTGATCCTAAAAAGCTTGGTTCTTGTATGAAATAACTGGATTCAATGAAATAGCTAGAGTCGCTTTGATTATCCACAAATATCTTGAAAAGACTTCGTGCACAAAAGTAGCAACTTCCCACTGACTCCACAAAAGTAGCAACTTACGCCACTGACTCCAAATATGACAACTGACTAAAAATAACAGCAACTTCCCTAGAAACAAGAACCCTGGACTGATTTAAAACAACTAAAAATAAACTTGCAGCTTGAGTTTACTGACAAAACCAAAGGGTCAAATTATGGCCAGATGGGGAACTAGGCAGGGAGATCTATTCTCCCCTTTCCTTTTCACTCTAGTTTTGAATTTTCTTTGTTGGCTTCTCTCTCTGAAAGCCTCGTTTTGATTCTGGTGAATACTTTTCAAGTTCGCTAAATCAATCTAGTCTTCCCCGGTAGTATGTTTATAGAATCCTCTGATTCGATAAGTTCAATCGTTTCTGGCATATTTAACACCTCTTTTTCTGAGAGTATGTATAAAGTTAAAGAAATTTCACATTCTGATATGAAGGTGATTAAAAATGGAGAAATGCTTGGAGTATCTCATTTGAGAAACAGAAGAGTTTTATCCAATGGTTTCACCTCTCTCGGGAAGGAGAATTTACAGGTACAACAACCTTGATAGTTTTCTTTTCACTATAATGATGCTGTTAACCTTTGTTCATTTCTTTATTGTGATGCAGTTGAAGTATAGTGATGGTGATAAAGCATTTGGATCCTCATCTGAGCTCTTTGTTGACGAGAGACTAAAGATTGCAACAGATGGCATAATAGTGGTCAGGTAGATTTTGCAAATTTTACCTTTAGTGAAGTGGGTACATCCTCCATCTTTGTATTAATGTTCTGATTTCTTCTATATGCAGTATGGAAATCTTGCGACCTCAAAGTATAGACGGTTTAAATGAGACTGGCATCAAAGGAAAACTAAGAATCACTACTCGATGCTTATGGCTCGACAAGGGGAAGCTTTTAGATGCACTTCACAAAGCCGCTCATGCAGCACTTTCAAGTTGCCCCGTAAATTGTCCTCTAGCTCACATGGAAAGAACTGTGTCTGAACTTTTGAAGAAGATGGTTAGAAAATACAGTGGTAAGAGGCCTGAAGTCATAGTCTTGGCTGTGGAGAACCCTGGAGGAGTTCTATCCGAACAGCTTGGTAGAAGGCTTTCAGGGAAGTCCGATACTAGATTCGGGATGTCAGCACTGAGAAAAGCAGTTGATGGACAGCCAACTAAGAGCCACTTAAACGGCATAAGACCAGATGGAAATGACGATTTGCATTCTGAGGACAACTCAAGTCAGGAGTCCCAAGGTTTCTTTTTTTTTTCTATATATTTCAGCATCTTTCGTTGCATATCCATGCATAAATGGAACATGTTGCTTTTAGAAACATGTCATTCGTGTTTTCAGGCATAATCCAGATAGCAGGTCATAGGTGATGTAGGGATATCTTCTTTAGGTTAGCTCGGAGTTGAAAAGCTTCTAGCGTAAGAGTTGTAGTATGAGACATGTCCATGTATGGTGATCAATTTGATTCAGAAAAAACTAAATTGCGTGGAAAGGTGGATGATCGCAATTTTAAGTTGTTTGTTATTACTATTAGACATGTCCATGGGGTTATGATCGTAGCTGTGGTTTTCTTAAATGAGCGTTTTTTTTTTTCCTACTCTTTTTGTTGGTCCAGGTTATTATATTGAACCTGGGAGCCTACTTCCTGAAGAAGACTACAATTCCTCAAACTCCAACTTGACAGAGACACAATCCTCGGATACCGAGGACATGGAAGATCTCTGGACACCGTTTATCACGCCATCCTCTCCTGTTAATGAATTGGTAAAGGAGAATGAGGGTTCTGTTGAACCATCAAAAAATACGCTGGAGATTTCAAACGGAGGTGAAGAAGGTAGTGATGAGGAGTCACTGAAAACATCAAATTCTTCGGAGAAGCCTTTGAAGCCTGTTAAAAGCAATAAATGGAAACCTGAGGAGATGAAGAGACTTATAAAATTACGTGGCCAATTGCATGCCAGGTTTCAAGTTGCCAAGGGACGAATGGCATTATGGGAAGAGATATCCACATGTATGTTGGGTGATGGAATGAATCGGAGTCCAGGACAGTGCAAATCTCTGTGGGCATCTCTGGTTCAGAAATATAAGGTGCGTTCTCTGTTTCTTCTTCCAAACGCCCCTTCTTACCTAAGCTCAACGCATGATGGATCCAATAAATTCTGCAATTCTTATTCCCTGTAAGAGAAATTGTATCGATAACTTTCTTTGTAACAGCAGGATAGCAAACGTGAAAAGACAATCAAGAGAAGTTGGCCATACTTGGAGGAAATGGACGCCATATTGTCTGATTCAGAGGCAGTAGCATCAAAATAAGAGGATTTTGAAGAAAAGCTAGTAATATTTATTCCATACAGCCTGGAGAAACGACCCATTTGGCATTTTTACATGAACATTGGCTCCTGCAGCGGAGGAATGGCCAAAATGTATTGGGACCTGGCGAACACGAACGAATCGAACATTTTAGGGAAATTTATATGCCAATTTTGTTATGCTTTAAACCAAGGAAGGAAATGAGAAAGTATGTGGCGGGAAAATATATTATGTTTTAAGCCCATTATTTTGCTTGGTCTTCAATGGGCCGTTCTTTGGGCCTGGCCCTGAATGTCGTTCACCACCAGTAGTTTACTTCGTGGAGAAGGCGACACGTGTTACGTGTAAACGTATTGAGGGAAGGAATAAACGTTTTAAACACTGGGAGTTTTAATATTTTACTTA

mRNA sequence

ATGACAAGCCCGATATCCGTGAGAGTCGAAGAAAAATCTTTAGCCCGCTATCTCCCTCCATTTCCCGCTCCGAGGCTCTGCAGCTACCATTTCGAGTTCACTCCGGAACCTCCCCAGCATATGCAATTGGAGTTTTTGGGCGGTTCTTCCGTCCTCAGGTCGCCACATTTGGGTCCTTACAGGCACACGATGGCAGCCTTTGGTGCTCTTTCACTATGTCCCTGCAGCCCTCTGCCACGCCCACGTACCATTTATTGTTACAGTGGTACTCCTAAAGTTTTAGGCAATAATGTCTCTAGAGTACACCGCAAAAGACCGGGAAGATTAGAAGGTGCTAGAAAAAGCATGGAAGATTCTGTTAAACGCAAGATGGAACAGTTTTATGAAGGTTCAGATGGTCCGCCCCTCCGTGTTCTTCCAATTGGCGGCCTTGTCCTGTCTGATCAGGTAATTCCAGCTTTGGATTCCCATACACCAATTTACGCTTCATCCTTTACAGTGGAGCTAATAAAAAAGCGTCTGAAGGAAAATGGGATTTTTGTTCCTTCTAGACTTAAGGTGTTTAAGATGAGAAAGAGATTCACAGCTGGGCCATTTGAAATAGAGCCAATTAGGGTTACCCATTCCATTCCTGATTGTTGTGGATTGGTTCTTCGATGTGCTGATGGTACAATTCTTCATACTGGAGACTGGAAGATTGATGAGTCCCCATTGGATGGTAAAGTCTTTGATCGAGAAACTTTGGAAGAATTATCAAAAGAAGGAGTTACTCTCATGATGAGTGACTCAACAAATGTACTATCTCCTGGAAGGACGATTAGTGAGTCTGTGGTGGCAGATGCTCTTTTAAGACGTATCTCTGCAGCTAAAGGAAGGGTCATCACGACTCAATTTGCTTCAAATATACACCGCCTTGGAAGTGTGAAAGCAGCCGCTGATTTAACTGGTAGAAAGTTGGTATTTGTTGGGATGTCTTTAAGGACATATCTGGAGGCAGCCTGGAAGGATGGAAAGGCACCAATTGACCCATCGACCTTGGTAAAAGTGGAGGACATTGAAGCCTATGCACCAAAAGATTTATTGATTGTCACAACTGGCTCACAAGCAGAACCACGTGCTGCCCTAAATCTTGCATCGTATGGAAGTAGTCACTCTCTCAAACTGAGCAAGGAAGATATGATTTTGTATTCGGCCAAGGTTATTCCTGGTAATGAATCTAGAGTGATGAAAATGTTGAACCGTATATCAGAGATTGGATCAAATATAATCATGGGCAAGAATGAGTTGCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAATACTACAAATTGTTAAACCGCAGCATTTTTTACCCATTCATGGAGAGCTTTTATTCCTTAAGGAGCATGAGCTGCTGGGCCGGTCGACAGGCATTCGACACACAACTGTGATTAAAAATGGAGAAATGCTTGGAGTATCTCATTTGAGAAACAGAAGAGTTTTATCCAATGGTTTCACCTCTCTCGGGAAGGAGAATTTACAGTTGAAGTATAGTGATGGTGATAAAGCATTTGGATCCTCATCTGAGCTCTTTGTTGACGAGAGACTAAAGATTGCAACAGATGGCATAATAGTGGTCAGTATGGAAATCTTGCGACCTCAAAGTATAGACGGTTTAAATGAGACTGGCATCAAAGGAAAACTAAGAATCACTACTCGATGCTTATGGCTCGACAAGGGGAAGCTTTTAGATGCACTTCACAAAGCCGCTCATGCAGCACTTTCAAGTTGCCCCGTAAATTGTCCTCTAGCTCACATGGAAAGAACTGTGTCTGAACTTTTGAAGAAGATGGTTAGAAAATACAGTGGTAAGAGGCCTGAAGTCATAGTCTTGGCTGTGGAGAACCCTGGAGGAGTTCTATCCGAACAGCTTGGTAGAAGGCTTTCAGGGAAGTCCGATACTAGATTCGGGATGTCAGCACTGAGAAAAGCAGTTGATGGACAGCCAACTAAGAGCCACTTAAACGGCATAAGACCAGATGGAAATGACGATTTGCATTCTGAGGACAACTCAAGTCAGGAGTCCCAAGGTTATTATATTGAACCTGGGAGCCTACTTCCTGAAGAAGACTACAATTCCTCAAACTCCAACTTGACAGAGACACAATCCTCGGATACCGAGGACATGGAAGATCTCTGGACACCGTTTATCACGCCATCCTCTCCTGTTAATGAATTGGTAAAGGAGAATGAGGGTTCTGTTGAACCATCAAAAAATACGCTGGAGATTTCAAACGGAGGTGAAGAAGGTAGTGATGAGGAGTCACTGAAAACATCAAATTCTTCGGAGAAGCCTTTGAAGCCTGTTAAAAGCAATAAATGGAAACCTGAGGAGATGAAGAGACTTATAAAATTACGTGGCCAATTGCATGCCAGGTTTCAAGTTGCCAAGGGACGAATGGCATTATGGGAAGAGATATCCACATGTATGTTGGGTGATGGAATGAATCGGAGTCCAGGACAGTGCAAATCTCTGTGGGCATCTCTGGTTCAGAAATATAAGCAGGATAGCAAACGTGAAAAGACAATCAAGAGAAGTTGGCCATACTTGGAGGAAATGGACGCCATATTGTCTGATTCAGAGGCAGTAGCATCAAAATAAGAGGATTTTGAAGAAAAGCTAGTAATATTTATTCCATACAGCCTGGAGAAACGACCCATTTGGCATTTTTACATGAACATTGGCTCCTGCAGCGGAGGAATGGCCAAAATGTATTGGGACCTGGCGAACACGAACGAATCGAACATTTTAGGGAAATTTATATGCCAATTTTGTTATGCTTTAAACCAAGGAAGGAAATGAGAAAGTATGTGGCGGGAAAATATATTATGTTTTAAGCCCATTATTTTGCTTGGTCTTCAATGGGCCGTTCTTTGGGCCTGGCCCTGAATGTCGTTCACCACCAGTAGTTTACTTCGTGGAGAAGGCGACACGTGTTACGTGTAAACGTATTGAGGGAAGGAATAAACGTTTTAAACACTGGGAGTTTTAATATTTTACTTA

Coding sequence (CDS)

ATGACAAGCCCGATATCCGTGAGAGTCGAAGAAAAATCTTTAGCCCGCTATCTCCCTCCATTTCCCGCTCCGAGGCTCTGCAGCTACCATTTCGAGTTCACTCCGGAACCTCCCCAGCATATGCAATTGGAGTTTTTGGGCGGTTCTTCCGTCCTCAGGTCGCCACATTTGGGTCCTTACAGGCACACGATGGCAGCCTTTGGTGCTCTTTCACTATGTCCCTGCAGCCCTCTGCCACGCCCACGTACCATTTATTGTTACAGTGGTACTCCTAAAGTTTTAGGCAATAATGTCTCTAGAGTACACCGCAAAAGACCGGGAAGATTAGAAGGTGCTAGAAAAAGCATGGAAGATTCTGTTAAACGCAAGATGGAACAGTTTTATGAAGGTTCAGATGGTCCGCCCCTCCGTGTTCTTCCAATTGGCGGCCTTGTCCTGTCTGATCAGGTAATTCCAGCTTTGGATTCCCATACACCAATTTACGCTTCATCCTTTACAGTGGAGCTAATAAAAAAGCGTCTGAAGGAAAATGGGATTTTTGTTCCTTCTAGACTTAAGGTGTTTAAGATGAGAAAGAGATTCACAGCTGGGCCATTTGAAATAGAGCCAATTAGGGTTACCCATTCCATTCCTGATTGTTGTGGATTGGTTCTTCGATGTGCTGATGGTACAATTCTTCATACTGGAGACTGGAAGATTGATGAGTCCCCATTGGATGGTAAAGTCTTTGATCGAGAAACTTTGGAAGAATTATCAAAAGAAGGAGTTACTCTCATGATGAGTGACTCAACAAATGTACTATCTCCTGGAAGGACGATTAGTGAGTCTGTGGTGGCAGATGCTCTTTTAAGACGTATCTCTGCAGCTAAAGGAAGGGTCATCACGACTCAATTTGCTTCAAATATACACCGCCTTGGAAGTGTGAAAGCAGCCGCTGATTTAACTGGTAGAAAGTTGGTATTTGTTGGGATGTCTTTAAGGACATATCTGGAGGCAGCCTGGAAGGATGGAAAGGCACCAATTGACCCATCGACCTTGGTAAAAGTGGAGGACATTGAAGCCTATGCACCAAAAGATTTATTGATTGTCACAACTGGCTCACAAGCAGAACCACGTGCTGCCCTAAATCTTGCATCGTATGGAAGTAGTCACTCTCTCAAACTGAGCAAGGAAGATATGATTTTGTATTCGGCCAAGGTTATTCCTGGTAATGAATCTAGAGTGATGAAAATGTTGAACCGTATATCAGAGATTGGATCAAATATAATCATGGGCAAGAATGAGTTGCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAATACTACAAATTGTTAAACCGCAGCATTTTTTACCCATTCATGGAGAGCTTTTATTCCTTAAGGAGCATGAGCTGCTGGGCCGGTCGACAGGCATTCGACACACAACTGTGATTAAAAATGGAGAAATGCTTGGAGTATCTCATTTGAGAAACAGAAGAGTTTTATCCAATGGTTTCACCTCTCTCGGGAAGGAGAATTTACAGTTGAAGTATAGTGATGGTGATAAAGCATTTGGATCCTCATCTGAGCTCTTTGTTGACGAGAGACTAAAGATTGCAACAGATGGCATAATAGTGGTCAGTATGGAAATCTTGCGACCTCAAAGTATAGACGGTTTAAATGAGACTGGCATCAAAGGAAAACTAAGAATCACTACTCGATGCTTATGGCTCGACAAGGGGAAGCTTTTAGATGCACTTCACAAAGCCGCTCATGCAGCACTTTCAAGTTGCCCCGTAAATTGTCCTCTAGCTCACATGGAAAGAACTGTGTCTGAACTTTTGAAGAAGATGGTTAGAAAATACAGTGGTAAGAGGCCTGAAGTCATAGTCTTGGCTGTGGAGAACCCTGGAGGAGTTCTATCCGAACAGCTTGGTAGAAGGCTTTCAGGGAAGTCCGATACTAGATTCGGGATGTCAGCACTGAGAAAAGCAGTTGATGGACAGCCAACTAAGAGCCACTTAAACGGCATAAGACCAGATGGAAATGACGATTTGCATTCTGAGGACAACTCAAGTCAGGAGTCCCAAGGTTATTATATTGAACCTGGGAGCCTACTTCCTGAAGAAGACTACAATTCCTCAAACTCCAACTTGACAGAGACACAATCCTCGGATACCGAGGACATGGAAGATCTCTGGACACCGTTTATCACGCCATCCTCTCCTGTTAATGAATTGGTAAAGGAGAATGAGGGTTCTGTTGAACCATCAAAAAATACGCTGGAGATTTCAAACGGAGGTGAAGAAGGTAGTGATGAGGAGTCACTGAAAACATCAAATTCTTCGGAGAAGCCTTTGAAGCCTGTTAAAAGCAATAAATGGAAACCTGAGGAGATGAAGAGACTTATAAAATTACGTGGCCAATTGCATGCCAGGTTTCAAGTTGCCAAGGGACGAATGGCATTATGGGAAGAGATATCCACATGTATGTTGGGTGATGGAATGAATCGGAGTCCAGGACAGTGCAAATCTCTGTGGGCATCTCTGGTTCAGAAATATAAGCAGGATAGCAAACGTGAAAAGACAATCAAGAGAAGTTGGCCATACTTGGAGGAAATGGACGCCATATTGTCTGATTCAGAGGCAGTAGCATCAAAATAA

Protein sequence

MTSPISVRVEEKSLARYLPPFPAPRLCSYHFEFTPEPPQHMQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGLVLSDQVIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAILSDSEAVASK

Homology

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BLAST of Carg20176 vs. NCBI nr
Match: XP_023531411.1 (uncharacterized protein LOC111793659 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1573.9 bits (4074), Expect = 0.0e+00
Identity = 821/906 (90.62%), Postives = 828/906 (91.39%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 100
           MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYC SGTPKVLGNNVSR
Sbjct: 1   MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCCSGTPKVLGNNVSR 60

Query: 101 VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL---------------- 160
           VHRKRPG LEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL                
Sbjct: 61  VHRKRPGGLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRY 120

Query: 161 VLSDQ-----------------------------------------------VIPALDSH 220
           +L D                                                VIPALDSH
Sbjct: 121 ILIDAGVMFPDHDELGVQKIIPDTTFIRRWSHKIEAVVITHGHEDHIGALPWVIPALDSH 180

Query: 221 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 280
           TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV
Sbjct: 181 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 240

Query: 281 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 340
           LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV
Sbjct: 241 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 300

Query: 341 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 400
           VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG
Sbjct: 301 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 360

Query: 401 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 460
           KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS
Sbjct: 361 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 420

Query: 461 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 520
           AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH
Sbjct: 421 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 480

Query: 521 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 580
           GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG
Sbjct: 481 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 540

Query: 581 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 640
           DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG
Sbjct: 541 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 600

Query: 641 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 700
           KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL
Sbjct: 601 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 660

Query: 701 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 760
           SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI
Sbjct: 661 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 720

Query: 761 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNT 820
           EPGSLLPEEDYNSSNSNLTET+SS  E +ED W PFITPSSPVNELVKE+EGSV+PSKNT
Sbjct: 721 EPGSLLPEEDYNSSNSNLTETESSGNEGLEDFWRPFITPSSPVNELVKEDEGSVQPSKNT 780

Query: 821 LEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVAKGRM 880
           LEISNGGEEGSDE SLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQV KGRM
Sbjct: 781 LEISNGGEEGSDEGSLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVPKGRM 840

Query: 881 ALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAILSDS 884
           ALWEEIS  MLGDGMNRSPGQCKSLWASLVQKY+QDSK EKTIK+SWPY EEMDAILSDS
Sbjct: 841 ALWEEISRSMLGDGMNRSPGQCKSLWASLVQKYEQDSKSEKTIKKSWPYFEEMDAILSDS 900

[Close]

BLAST of Carg20176 vs. NCBI nr
Match: XP_023531412.1 (uncharacterized protein LOC111793659 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1568.1 bits (4059), Expect = 0.0e+00
Identity = 820/906 (90.51%), Postives = 827/906 (91.28%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 100
           MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYC SGTPKVLGNNVSR
Sbjct: 1   MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCCSGTPKVLGNNVSR 60

Query: 101 VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL---------------- 160
           VHRKRPG LEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL                
Sbjct: 61  VHRKRPGGLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRY 120

Query: 161 VLSDQ-----------------------------------------------VIPALDSH 220
           +L D                                                VIPALDSH
Sbjct: 121 ILIDAGVMFPDHDELGVQKIIPDTTFIRRWSHKIEAVVITHGHEDHIGALPWVIPALDSH 180

Query: 221 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 280
           TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV
Sbjct: 181 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 240

Query: 281 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 340
           LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV
Sbjct: 241 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 300

Query: 341 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 400
           VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG
Sbjct: 301 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 360

Query: 401 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 460
           KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS
Sbjct: 361 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 420

Query: 461 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 520
           AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH
Sbjct: 421 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 480

Query: 521 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 580
           GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG
Sbjct: 481 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 540

Query: 581 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 640
           DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG
Sbjct: 541 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 600

Query: 641 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 700
           KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL
Sbjct: 601 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 660

Query: 701 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 760
           SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI
Sbjct: 661 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 720

Query: 761 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNT 820
           EPGSLLPEEDYNSSNSNLTET+SS  E +ED W PFITPSSPVNELVKE+EGSV+PSKNT
Sbjct: 721 EPGSLLPEEDYNSSNSNLTETESSGNEGLEDFWRPFITPSSPVNELVKEDEGSVQPSKNT 780

Query: 821 LEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVAKGRM 880
           LEISNGGEEGSDE SLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQV KGRM
Sbjct: 781 LEISNGGEEGSDEGSLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVPKGRM 840

Query: 881 ALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAILSDS 884
           ALWEEIS  MLGDGMNRSPGQCKSLWASLVQKY +DSK EKTIK+SWPY EEMDAILSDS
Sbjct: 841 ALWEEISRSMLGDGMNRSPGQCKSLWASLVQKY-EDSKSEKTIKKSWPYFEEMDAILSDS 900

[Close]

BLAST of Carg20176 vs. NCBI nr
Match: XP_022934023.1 (uncharacterized protein LOC111441254 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1561.2 bits (4041), Expect = 0.0e+00
Identity = 819/909 (90.10%), Postives = 824/909 (90.65%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 100
           MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR
Sbjct: 1   MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 60

Query: 101 VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL---------------- 160
           VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL                
Sbjct: 61  VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRY 120

Query: 161 VLSDQ-----------------------------------------------VIPALDSH 220
           +L D                                                VIPALDSH
Sbjct: 121 ILIDAGVMFPDHDELGVQKIIPDTTFIRRWSHKIEAVVITHGHEDHIGALPWVIPALDSH 180

Query: 221 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 280
           TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV
Sbjct: 181 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 240

Query: 281 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 340
           LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV
Sbjct: 241 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 300

Query: 341 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 400
           VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG
Sbjct: 301 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 360

Query: 401 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 460
           KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS
Sbjct: 361 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 420

Query: 461 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 520
           AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH
Sbjct: 421 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 480

Query: 521 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 580
           GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG
Sbjct: 481 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 540

Query: 581 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 640
           DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNET IKGKLRITTRCLWLDKG
Sbjct: 541 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETVIKGKLRITTRCLWLDKG 600

Query: 641 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 700
           KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL
Sbjct: 601 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 660

Query: 701 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 760
           SEQLGRRLSGKSDTRFGMSALRKAV GQPTK HLNGIRPDGNDDLHSEDNSSQESQGYYI
Sbjct: 661 SEQLGRRLSGKSDTRFGMSALRKAVVGQPTKCHLNGIRPDGNDDLHSEDNSSQESQGYYI 720

Query: 761 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNT 820
           EPGSLLPEEDYNSSNSNLTETQSSDTEDMED WTPFITPSSPVNELVKENEGSV+PSKNT
Sbjct: 721 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDFWTPFITPSSPVNELVKENEGSVQPSKNT 780

Query: 821 LEISNGGEEGSDEESLKTSNSSEKPL---KPVKSNKWKPEEMKRLIKLRGQLHARFQVAK 880
           LEISNG         LKTSNSSEKPL       SNKWKPEEMKRLIKLRGQLHARFQVAK
Sbjct: 781 LEISNG---------LKTSNSSEKPLXXXXXXXSNKWKPEEMKRLIKLRGQLHARFQVAK 840

Query: 881 GRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAIL 884
           GRMALWEEISTCMLGDGMNRSPGQCKS+WASLVQKY+QDSKREKTIK+SWPYLEEMDAIL
Sbjct: 841 GRMALWEEISTCMLGDGMNRSPGQCKSMWASLVQKYEQDSKREKTIKKSWPYLEEMDAIL 900

[Close]

BLAST of Carg20176 vs. NCBI nr
Match: XP_022934026.1 (uncharacterized protein LOC111441254 isoform X4 [Cucurbita moschata])

HSP 1 Score: 1555.4 bits (4026), Expect = 0.0e+00
Identity = 818/909 (89.99%), Postives = 823/909 (90.54%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 100
           MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR
Sbjct: 1   MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRPRTIYCYSGTPKVLGNNVSR 60

Query: 101 VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL---------------- 160
           VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL                
Sbjct: 61  VHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRY 120

Query: 161 VLSDQ-----------------------------------------------VIPALDSH 220
           +L D                                                VIPALDSH
Sbjct: 121 ILIDAGVMFPDHDELGVQKIIPDTTFIRRWSHKIEAVVITHGHEDHIGALPWVIPALDSH 180

Query: 221 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 280
           TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV
Sbjct: 181 TPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLV 240

Query: 281 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 340
           LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV
Sbjct: 241 LRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESV 300

Query: 341 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 400
           VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG
Sbjct: 301 VADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDG 360

Query: 401 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 460
           KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS
Sbjct: 361 KAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYS 420

Query: 461 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 520
           AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH
Sbjct: 421 AKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIH 480

Query: 521 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 580
           GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG
Sbjct: 481 GELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDG 540

Query: 581 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKG 640
           DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNET IKGKLRITTRCLWLDKG
Sbjct: 541 DKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETVIKGKLRITTRCLWLDKG 600

Query: 641 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 700
           KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL
Sbjct: 601 KLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVL 660

Query: 701 SEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYI 760
           SEQLGRRLSGKSDTRFGMSALRKAV GQPTK HLNGIRPDGNDDLHSEDNSSQESQGYYI
Sbjct: 661 SEQLGRRLSGKSDTRFGMSALRKAVVGQPTKCHLNGIRPDGNDDLHSEDNSSQESQGYYI 720

Query: 761 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNT 820
           EPGSLLPEEDYNSSNSNLTETQSSDTEDMED WTPFITPSSPVNELVKENEGSV+PSKNT
Sbjct: 721 EPGSLLPEEDYNSSNSNLTETQSSDTEDMEDFWTPFITPSSPVNELVKENEGSVQPSKNT 780

Query: 821 LEISNGGEEGSDEESLKTSNSSEKPL---KPVKSNKWKPEEMKRLIKLRGQLHARFQVAK 880
           LEISNG         LKTSNSSEKPL       SNKWKPEEMKRLIKLRGQLHARFQVAK
Sbjct: 781 LEISNG---------LKTSNSSEKPLXXXXXXXSNKWKPEEMKRLIKLRGQLHARFQVAK 840

Query: 881 GRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAIL 884
           GRMALWEEISTCMLGDGMNRSPGQCKS+WASLVQKY +DSKREKTIK+SWPYLEEMDAIL
Sbjct: 841 GRMALWEEISTCMLGDGMNRSPGQCKSMWASLVQKY-EDSKREKTIKKSWPYLEEMDAIL 899

[Close]

BLAST of Carg20176 vs. NCBI nr
Match: XP_023516476.1 (uncharacterized protein LOC111780336 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1486.5 bits (3847), Expect = 0.0e+00
Identity = 778/913 (85.21%), Postives = 805/913 (88.17%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRP----RTIYCYSGTPKVLGN 100
           MQLEFLGGSSVL SPH  PY+  MA+FGALSLCPCSPL RP    RTIYC  G+P VLG 
Sbjct: 1   MQLEFLGGSSVLSSPHSAPYKQRMASFGALSLCPCSPLSRPHQTVRTIYCCRGSPTVLGK 60

Query: 101 NVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL------------ 160
           NVS+ HRKRPGRLEGA++SMEDSV+RKMEQFYEGSDGPPLRVLPIGGL            
Sbjct: 61  NVSKEHRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGN 120

Query: 161 ----VLSDQ-----------------------------------------------VIPA 220
               +L D                                                VIPA
Sbjct: 121 YDRYILIDAGVMFPDHDELGVQKIIPDTTFIRRWSHKIEAVVITHGHEDHIGALPWVIPA 180

Query: 221 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 280
           LDSHTPI+ASSFTVELIKKRLKENGIF+PSRLKVFKM++RFTAGPFEIEPIRVTHSIPDC
Sbjct: 181 LDSHTPIFASSFTVELIKKRLKENGIFIPSRLKVFKMKRRFTAGPFEIEPIRVTHSIPDC 240

Query: 281 CGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTI 340
           CGLVLRCADGTI HTGDWKIDESPLDGKVFDRETLE+LSKEGVTLMMSDSTNVLSPGRTI
Sbjct: 241 CGLVLRCADGTIFHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSPGRTI 300

Query: 341 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAA 400
           SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYL+AA
Sbjct: 301 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAA 360

Query: 401 WKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 460
           WKDGKAPIDPSTLVKVEDI+AYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM
Sbjct: 361 WKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 420

Query: 461 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHF 520
           ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGH YRGELEE+LQIVKPQHF
Sbjct: 421 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVKPQHF 480

Query: 521 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLK 580
           LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLG ENLQLK
Sbjct: 481 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGMENLQLK 540

Query: 581 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLW 640
           YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQS+DGLNETGI+GKLRITTRCLW
Sbjct: 541 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNETGIRGKLRITTRCLW 600

Query: 641 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENP 700
           LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELL+KMVRKYSGKRPEVIV+AVENP
Sbjct: 601 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKMVRKYSGKRPEVIVMAVENP 660

Query: 701 GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ 760
           GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ
Sbjct: 661 GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ 720

Query: 761 GYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEP 820
           GYYIEPGSLLPEEDYNSSNSNLTET+SS  E +ED W PFITPSSPVNELVKE+EGSV+P
Sbjct: 721 GYYIEPGSLLPEEDYNSSNSNLTETESSGNEGLEDFWRPFITPSSPVNELVKEDEGSVQP 780

Query: 821 SKNTLEISNGGEEGSDEESLKTSN---SSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARF 880
           SKNTLEISNGGEEGSDE SLKTSN                WKPEEMKRLIKLRGQLHARF
Sbjct: 781 SKNTLEISNGGEEGSDEGSLKTSNXXXXXXXXXXXXXXXXWKPEEMKRLIKLRGQLHARF 840

Query: 881 QVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEM 884
           QV+KGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKY +DSK EKTIK+SWPY EEM
Sbjct: 841 QVSKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKY-EDSKSEKTIKKSWPYFEEM 900

[Close]

BLAST of Carg20176 vs. TAIR10
Match: AT5G63420.1 (RNA-metabolising metallo-beta-lactamase family protein)

HSP 1 Score: 1043.5 bits (2697), Expect = 7.4e-305
Identity = 572/906 (63.13%), Postives = 673/906 (74.28%), Query Frame = 0


Query: 50  SVLRSPHLGPYRHTMAAFGALSLCPCSPLPR-----PRTIYC-YSGTPKVLGNNVSRVHR 109
           S +R P   P +  MAAF ALSLCP +   R       T+ C  +  P    ++ S+  R
Sbjct: 20  SDVRRPATTPSK--MAAFSALSLCPYTFTFRQSSRIKSTVSCSVTSAPASGTSSSSKTPR 79

Query: 110 KRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL----------------VLS 169
           +R GRLEG  KSMEDSVKRKMEQFYEG+DGPPLR+LPIGGL                +L 
Sbjct: 80  RRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVGNYDRYILI 139

Query: 170 DQ-----------------------------------------------VIPALDSHTPI 229
           D                                                VIPALD +TPI
Sbjct: 140 DAGIMFPDYDEPGIQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGALPWVIPALDPNTPI 199

Query: 230 YASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLVLRC 289
           +ASSFT+ELIKKRLKE+GIFV SRLK F  R+RF AGPFEIEPI VTHSIPDC GL LRC
Sbjct: 200 FASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSIPDCSGLFLRC 259

Query: 290 ADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESVVAD 349
           ADG ILHTGDWKIDE+PLDGKVFDRE LEELSKEGVTLMMSDSTNVLSPGRTISE VVAD
Sbjct: 260 ADGNILHTGDWKIDEAPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISEKVVAD 319

Query: 350 ALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAP 409
           AL+R + AAKGRVITTQFASNIHRLGS+KAAAD+TGRKLVFVGMSLRTYLEAAW+DGKAP
Sbjct: 320 ALVRNVMAAKGRVITTQFASNIHRLGSIKAAADITGRKLVFVGMSLRTYLEAAWRDGKAP 379

Query: 410 IDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYSAKV 469
           IDPS+L+KVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSH+ KL+KED+ILYSAKV
Sbjct: 380 IDPSSLIKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIILYSAKV 439

Query: 470 IPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIHGEL 529
           IPGNESRVMKM+NRI++IG NIIMGKNE+LHTSGHAYRGELEE+L+IVKPQHFLPIHGEL
Sbjct: 440 IPGNESRVMKMMNRIADIGPNIIMGKNEMLHTSGHAYRGELEEVLKIVKPQHFLPIHGEL 499

Query: 530 LFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDGDKA 589
           LFLKEHELLG+STGIRHTTVIKNGEMLGVSHLRNRRVLSNGF+SLG+ENLQL YSDGDKA
Sbjct: 500 LFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKA 559

Query: 590 FGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKGKLL 649
           FG+SSEL +DERL+I++DGIIV+SMEI+RP    G++E  +KGK+RITTRC+WLDKG+LL
Sbjct: 560 FGTSSELCIDERLRISSDGIIVLSMEIMRP----GVSENTLKGKIRITTRCMWLDKGRLL 619

Query: 650 DALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVLSEQ 709
           DALHKAAHAALSSCPV CPL+HMERTVSE+L+K+VRKYSGKRPEVI +A ENP  V +++
Sbjct: 620 DALHKAAHAALSSCPVTCPLSHMERTVSEVLRKIVRKYSGKRPEVIAIATENPMAVRADE 679

Query: 710 LGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYIEPG 769
           +  RLSG      G++ALRK V+G   +S      P         D + ++     I+  
Sbjct: 680 VSARLSGDPSVGSGVAALRKVVEGNDKRSRAKK-APSQEASPKEVDRTLEDD---IIDSA 739

Query: 770 SLLPEEDYNSS--NSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNTL 829
            LL EE+  +S     +     S +E+ +D W  FI PSS  +    EN   V  ++   
Sbjct: 740 RLLAEEETAASTYTEEVDTPVGSSSEESDDFWKSFINPSSSPSPSETENMNKVADTEPKA 799

Query: 830 EISNGGEEGSDEESLKTSNSSEKPLKP--VKSNKWKPEEMKRLIKLRGQLHARFQVAKGR 883
           E   G E   D++ L  ++ SE    P  V+ NKWKPEE+K++I++RG+LH+RFQV KGR
Sbjct: 800 E---GKENSRDDDELADASDSETKSSPKRVRKNKWKPEEIKKVIRMRGELHSRFQVVKGR 859

[Close]

BLAST of Carg20176 vs. TAIR10
Match: AT2G38250.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-07
Identity = 35/112 (31.25%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 769 DEESLKTSNSSEKPLKPV----KSNKWKPEEMKRLIKLRGQLHARFQVAKGRMALWEEIS 828
           ++  L T + + +   PV    +  +W  EE K LI +RG+L   F   K    LWE IS
Sbjct: 16  NKHHLHTQSQTPEIASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVIS 75

Query: 829 TCMLGDGMNRSPGQCKSLWASLVQKYKQ-DSKREKTIKRSWPYLEEMDAILS 876
             M      RSP QCK  W +LV ++K  ++   +T ++ +P+ ++M  I +
Sbjct: 76  NKMRDKSFPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFT 127

[Close]

BLAST of Carg20176 vs. TAIR10
Match: AT5G01380.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-07
Identity = 29/85 (34.12%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 790 KWKPEEMKRLIKLRGQLHARFQVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQK 849
           +W  EE K L+ +R +L   F   K    LWE ++  M   G  RS  QCKS W +LV +
Sbjct: 51  QWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTR 110

Query: 850 YKQ-DSKREKTIKRSWPYLEEMDAI 874
           YK  ++     I++ +P+  E+ +I
Sbjct: 111 YKACETTEPDAIRQQFPFYNEIQSI 135

[Close]

BLAST of Carg20176 vs. TAIR10
Match: AT1G76890.2 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-07
Identity = 31/110 (28.18%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 770 EESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVAKGRMALWEEISTCMLG 829
           + ++K  N          S++W   E++ LI++R  L A +Q    +  LWEEIS  M  
Sbjct: 377 DTTIKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRR 436

Query: 830 DGMNRSPGQCKSLWASL---VQKYKQDSKREKTIKRSWPYLEEMDAILSD 877
            G NRS  +CK  W ++    +K K+ +K+     ++ PY  +++A+ ++
Sbjct: 437 LGYNRSAKRCKEKWENINKYFKKVKESNKKRPLDSKTCPYFHQLEALYNE 486

[Close]

BLAST of Carg20176 vs. TAIR10
Match: AT3G25990.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-07
Identity = 37/124 (29.84%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 736 PSSPVNELVKE--NEGSVEPSKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKP 795
           PS  +N ++ +  + G ++P +  L  S+GGE   D E +K       P K  ++  W  
Sbjct: 9   PSRDINMMIGDVTSNGDLQPHQIILGESSGGE---DHEIIKA------PKK--RAETWAQ 68

Query: 796 EEMKRLIKLRGQLHARFQVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQD 855
           +E + LI LR ++   F  +K    LWE+IS  M   G +RSP  C   W ++++++K+ 
Sbjct: 69  DETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNILKEFKKA 121

Query: 856 SKRE 858
            + E
Sbjct: 129 KQHE 121

[Close]

BLAST of Carg20176 vs. Swiss-Prot
Match: sp|Q84W56|RNJ_ARATH (Ribonuclease J OS=Arabidopsis thaliana OX=3702 GN=RNJ PE=1 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 1.3e-303
Identity = 572/906 (63.13%), Postives = 673/906 (74.28%), Query Frame = 0


Query: 50  SVLRSPHLGPYRHTMAAFGALSLCPCSPLPR-----PRTIYC-YSGTPKVLGNNVSRVHR 109
           S +R P   P +  MAAF ALSLCP +   R       T+ C  +  P    ++ S+  R
Sbjct: 20  SDVRRPATTPSK--MAAFSALSLCPYTFTFRQSSRIKSTVSCSVTSAPASGTSSSSKTPR 79

Query: 110 KRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL----------------VLS 169
           +R GRLEG  KSMEDSVKRKMEQFYEG+DGPPLR+LPIGGL                +L 
Sbjct: 80  RRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVGNYDRYILI 139

Query: 170 DQ-----------------------------------------------VIPALDSHTPI 229
           D                                                VIPALD +TPI
Sbjct: 140 DAGIMFPDYDEPGIQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGALPWVIPALDPNTPI 199

Query: 230 YASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLVLRC 289
           +ASSFT+ELIKKRLKE+GIFV SRLK F  R+RF AGPFEIEPI VTHSIPDC GL LRC
Sbjct: 200 FASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSIPDCSGLFLRC 259

Query: 290 ADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESVVAD 349
           ADG ILHTGDWKIDE+PLDGKVFDRE LEELSKEGVTLMMSDSTNVLSPGRTISE VVAD
Sbjct: 260 ADGNILHTGDWKIDEAPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISEKVVAD 319

Query: 350 ALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAP 409
           AL+R + AAKGRVITTQFASNIHRLGS+KAAAD+TGRKLVFVGMSLRTYLEAAW+DGKAP
Sbjct: 320 ALVRNVMAAKGRVITTQFASNIHRLGSIKAAADITGRKLVFVGMSLRTYLEAAWRDGKAP 379

Query: 410 IDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYSAKV 469
           IDPS+L+KVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSH+ KL+KED+ILYSAKV
Sbjct: 380 IDPSSLIKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIILYSAKV 439

Query: 470 IPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIHGEL 529
           IPGNESRVMKM+NRI++IG NIIMGKNE+LHTSGHAYRGELEE+L+IVKPQHFLPIHGEL
Sbjct: 440 IPGNESRVMKMMNRIADIGPNIIMGKNEMLHTSGHAYRGELEEVLKIVKPQHFLPIHGEL 499

Query: 530 LFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDGDKA 589
           LFLKEHELLG+STGIRHTTVIKNGEMLGVSHLRNRRVLSNGF+SLG+ENLQL YSDGDKA
Sbjct: 500 LFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKA 559

Query: 590 FGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLWLDKGKLL 649
           FG+SSEL +DERL+I++DGIIV+SMEI+RP    G++E  +KGK+RITTRC+WLDKG+LL
Sbjct: 560 FGTSSELCIDERLRISSDGIIVLSMEIMRP----GVSENTLKGKIRITTRCMWLDKGRLL 619

Query: 650 DALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENPGGVLSEQ 709
           DALHKAAHAALSSCPV CPL+HMERTVSE+L+K+VRKYSGKRPEVI +A ENP  V +++
Sbjct: 620 DALHKAAHAALSSCPVTCPLSHMERTVSEVLRKIVRKYSGKRPEVIAIATENPMAVRADE 679

Query: 710 LGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQGYYIEPG 769
           +  RLSG      G++ALRK V+G   +S      P         D + ++     I+  
Sbjct: 680 VSARLSGDPSVGSGVAALRKVVEGNDKRSRAKK-APSQEASPKEVDRTLEDD---IIDSA 739

Query: 770 SLLPEEDYNSS--NSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEPSKNTL 829
            LL EE+  +S     +     S +E+ +D W  FI PSS  +    EN   V  ++   
Sbjct: 740 RLLAEEETAASTYTEEVDTPVGSSSEESDDFWKSFINPSSSPSPSETENMNKVADTEPKA 799

Query: 830 EISNGGEEGSDEESLKTSNSSEKPLKP--VKSNKWKPEEMKRLIKLRGQLHARFQVAKGR 883
           E   G E   D++ L  ++ SE    P  V+ NKWKPEE+K++I++RG+LH+RFQV KGR
Sbjct: 800 E---GKENSRDDDELADASDSETKSSPKRVRKNKWKPEEIKKVIRMRGELHSRFQVVKGR 859

[Close]

BLAST of Carg20176 vs. Swiss-Prot
Match: sp|M4MR97|RNJ_SINM2 (Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) OX=1286640 GN=rnj PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-58
Identity = 156/477 (32.70%), Postives = 247/477 (51.78%), Query Frame = 0


Query: 157 HTPIYASSFTVELI--KKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCC 216
           + P+YAS FT  ++  K+  +++   +P  + +FK   R   GPF +E + V HSIP+  
Sbjct: 102 NVPVYASPFTAGMLEAKRAFEKSRSEIP--ITIFKQGDRINVGPFSVEAVGVNHSIPEPM 161

Query: 217 GLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTIS 276
            LV+R   GT++HTGDWKID  P  G + D     ++ +EGV  ++ DSTN L  G + S
Sbjct: 162 ALVIRTQLGTVVHTGDWKIDLEPSLGPLTDESRFRQIGEEGVLALVCDSTNALREGVSPS 221

Query: 277 ESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAW 336
           E  V+++L + I+ A+GRV  T F+SN+ R+ SV  AA+  GR+++ +G S++  ++ A 
Sbjct: 222 ERQVSESLAKIIADAEGRVGITTFSSNVGRIRSVAEAAEAAGREVLLLGSSMKRVVDVAR 281

Query: 337 KDGKAPIDPSTLVKVEDIEAYAPKD-LLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 396
             G   ++       ED   Y P+D ++++ TGSQ EPRAAL   +     ++  S  D 
Sbjct: 282 DVGL--MEGVKPFLAEDEFGYIPRDKVVVILTGSQGEPRAALAKIARDEMRNVAFSAGDT 341

Query: 397 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHF 456
           I++S++ IPGNE  +  + N + E G +II     L+H SGH  R EL+++ Q VKPQ  
Sbjct: 342 IVFSSRTIPGNEKAINDIKNGLIEQGIHIITDSEALVHVSGHPRRTELQQMYQWVKPQIL 401

Query: 457 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLK 516
           +P+HGE   L  H  LG  +GI     ++NGEML        R+       + +      
Sbjct: 402 VPVHGEAAHLTAHAELGLQSGIPSVPRLRNGEML--------RLAPGPAEVIDEAPHGRI 461

Query: 517 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLW 576
           Y DG    G   E+ + ER K++  G + VS+ +       G  +    G          
Sbjct: 462 YKDG-TLIGDFEEMGIGERRKLSFAGHVSVSVVLDSRYDFLGDPDVVPIGLPEFD----- 521

Query: 577 LDKGKLL-DALHKAAHAALSSCP--VNCPLAHMERTVSELLKKMVRKYSGKRPEVIV 628
            D+G+ + D L+ A   A+ S P      LA ++  V   ++    +  GK+P V V
Sbjct: 522 -DEGEAMEDTLYDAVLGAVESIPRAKRKDLAMLQEAVRRAVRSTTNQVWGKKPVVTV 559

[Close]

BLAST of Carg20176 vs. Swiss-Prot
Match: sp|P54122|RNJ_CORGL (Ribonuclease J OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=rnj PE=3 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-56
Identity = 134/398 (33.67%), Postives = 219/398 (55.03%), Query Frame = 0


Query: 154 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFT--AGPFEIEPIRVTHSIP 213
           L +  PI AS FT+ LI  + KE+      R K+ ++ ++     GPF I    V HSIP
Sbjct: 235 LRNDIPILASRFTLALIAAKCKEH----RQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIP 294

Query: 214 DCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGR 273
           DC GL ++   G ++HTGD K+D++P DG+  D   L     EGV LM+ DSTN  +PG 
Sbjct: 295 DCLGLAIKTPAGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLCDSTNATTPGV 354

Query: 274 TISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLE 333
           + SE+ VA  L R +  AK RVI   FASN++R+ +   AA  + RK+ F G S+   +E
Sbjct: 355 SGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNME 414

Query: 334 AAWKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKE 393
            A K G       T++ ++D    AP  ++++TTG+Q EP AAL+  +      + +   
Sbjct: 415 IAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDG 474

Query: 394 DMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQ 453
           D+I+ S+ ++PGNE  V  ++N +++IG+ ++ G++  +HTSGH Y GEL  +    +P+
Sbjct: 475 DLIILSSSLVPGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPK 534

Query: 454 HFLPIHGELLFLKEHELLGRSTGIRHTTVI--KNGEMLGVSHLRNRRVLSNGFTSLGKEN 513
           + +P+HGE   L+ ++ L  STG+    V+  +NG ++ + + R + V        G+  
Sbjct: 535 NAMPVHGEWRHLRANKELAISTGVNRDNVVLAQNGVVVDMVNGRAQVV--------GQIP 594

Query: 514 LQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEI 548
           +   Y DG       +++  D R  +   G+I ++  I
Sbjct: 595 VGNLYVDGVTMGDIDADILAD-RTSLGEGGLISITAVI 619

[Close]

BLAST of Carg20176 vs. Swiss-Prot
Match: sp|A0QVT2|RNJ_MYCS2 (Ribonuclease J OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=rnj PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.7e-54
Identity = 133/391 (34.02%), Postives = 214/391 (54.73%), Query Frame = 0


Query: 159 PIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDCCGLVL 218
           P+  S FT+ L++++ +E+ +  P  ++V + R+    G FE E   V HSIP C  + +
Sbjct: 101 PVVGSKFTIALVREKCREHRL-KPKFVEVAE-RQSSQHGVFECEYFAVNHSIPGCLAVAI 160

Query: 219 RCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTISESVV 278
               GT+LHTGD K+D+ PLDG+  D   +  L   GV L + DSTN   PG + SES V
Sbjct: 161 HTGAGTVLHTGDIKLDQLPLDGRPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVSPSESEV 220

Query: 279 ADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGK 338
              L R I  A+GRVI   FASN+ R+  +  AA   GR++ FVG S+   +  A + G 
Sbjct: 221 GPTLHRLIRGAEGRVIVACFASNVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGY 280

Query: 339 APIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDMILYSA 398
             +D S ++ +   E   P  ++++TTG+Q EP AAL+  S G   S+ L+  D+I+ S+
Sbjct: 281 LKVDDSDILDIAAAEMMPPDRVVLITTGTQGEPMAALSRMSRGEHRSITLTSGDLIILSS 340

Query: 399 KVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHFLPIHG 458
            +IPGNE  V  +++ +S+IG+ ++      +H SGHAY GEL  +   V+P++ +P+HG
Sbjct: 341 SLIPGNEEAVYGVIDSLSKIGARVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHG 400

Query: 459 ELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLKYSDGD 518
               L+ +  L  STG+    ++     + V  +  R  +S G  ++GK      + DG 
Sbjct: 401 TWRHLRANAALAASTGVPPENIVLAENGVSVDLVAGRASIS-GAVTVGK-----MFVDG- 460

Query: 519 KAFGSSSELFVDERLKIATDGIIVVSMEILR 550
              G   +  + ERL I + G + +++ + R
Sbjct: 461 LITGDVGDATLGERL-ILSSGFVSITVVVHR 481

[Close]

BLAST of Carg20176 vs. Swiss-Prot
Match: sp|Q72JJ7|RNJ_THET2 (Ribonuclease J OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) OX=262724 GN=rnj PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-53
Identity = 151/495 (30.51%), Postives = 250/495 (50.51%), Query Frame = 0


Query: 141 IGGLVLSDQVIPALDSHTPIYASSFTVELIKKRLKENGIFVPS-RLKVFKMRKRFTAGP- 200
           IGGL     +I   +S  PIY +  T+ L++ +L+E G+   +  LK      R   G  
Sbjct: 99  IGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRY 158

Query: 201 FEIEPIRVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTL 260
           F ++  R+THSIPD  G+V+R   GTI+HTGD+K+D +P+DGKV     + +   EGV L
Sbjct: 159 FTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLL 218

Query: 261 MMSDSTNVLSPGRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRK 320
           +++D+TN   PG T SE  +A  L R I  A GRV  T FAS+IHR+ SV  AA+  GRK
Sbjct: 219 LIADATNAERPGYTPSEMEIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKYGRK 278

Query: 321 LVFVGMSLRTYLEAAWKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLA 380
           +   G S+  +   A + G   +    L  +E+++      +LI+ TGSQ +P + L+  
Sbjct: 279 VAMEGRSMLKFSRIALELGYLKV-KDRLYTLEEVKDLPDHQVLILATGSQGQPMSVLHRL 338

Query: 381 SYGSSHSLKLSKEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYR 440
           ++     + +   D ++ S+  IPGNE  V +++NR+  +G+ ++      +H SGHA +
Sbjct: 339 AFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQ 398

Query: 441 GELEEILQIVKPQHFLPIHGELLFLKEHELLGRSTG--IRHTTVIKNGEMLGVSHLRNRR 500
            EL+ IL +  P+ FLP HGE+      + L  S       T + +NG +         R
Sbjct: 399 EELKLILNLTTPRFFLPWHGEVRHQMNFKWLAESMSRPPEKTLIGENGAVY--------R 458

Query: 501 VLSNGFTSLGKENLQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGL 560
           +    F  +G+    + Y DG    G  +E  + +R  +A +G++V++         D +
Sbjct: 459 LTRETFEKVGEVPHGVLYVDG-LGVGDITEEILADRRHMAEEGLVVIT----ALAGEDPV 518

Query: 561 NETGIKGKLRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVR 620
            E   +G ++   R L   +   L+AL               PL  +   +   +KK ++
Sbjct: 519 VEVVSRGFVKAGERLLGEVRRMALEALKNGVRE-------KKPLERIRDDIYYPVKKFLK 572

Query: 621 KYSGKRPEVIVLAVE 632
           K +G+ P ++ + +E
Sbjct: 579 KATGRDPMILPVVIE 572

[Close]

BLAST of Carg20176 vs. TrEMBL
Match: tr|A0A1S3CLZ6|A0A1S3CLZ6_CUCME (ribonuclease J isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1)

HSP 1 Score: 1420.6 bits (3676), Expect = 0.0e+00
Identity = 745/910 (81.87%), Postives = 786/910 (86.37%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRP----RTIYCYSGTPKVLGN 100
           MQLEFLGGSS+L S H  PY+  MA+FGALSLCPCSPL RP    RTIYC  G+P VLG 
Sbjct: 1   MQLEFLGGSSILGSSHSAPYKQRMASFGALSLCPCSPLLRPHHPVRTIYCCHGSPTVLGK 60

Query: 101 NVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL------------ 160
           NVS+V RKRPGRLEGA++SMEDSV+RKMEQFYEGSDGPPLRVLPIGGL            
Sbjct: 61  NVSKVPRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGN 120

Query: 161 ----VLSDQ-----------------------------------------------VIPA 220
               +L D                                                VIPA
Sbjct: 121 YDRYILIDAGVMFPDHDELGVQKIIPDTTFIKRWSHKIEAVVITHGHEDHIGALPWVIPA 180

Query: 221 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 280
           LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC
Sbjct: 181 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 240

Query: 281 CGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTI 340
           CGLVLRC DGTILHTGDWKIDESPLDGKVFDRETLE+LSKEGVTLMMSDSTNVLSPGRTI
Sbjct: 241 CGLVLRCTDGTILHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSPGRTI 300

Query: 341 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAA 400
           SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYL+AA
Sbjct: 301 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAA 360

Query: 401 WKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 460
           WKDGKAPIDPSTLVKVEDI+AYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM
Sbjct: 361 WKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 420

Query: 461 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHF 520
           ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGH YRGELEE+LQIVKPQHF
Sbjct: 421 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVKPQHF 480

Query: 521 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLK 580
           LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLG+ENLQLK
Sbjct: 481 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQLK 540

Query: 581 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLW 640
           YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQS+DGLN TGIKGKLRITTRCLW
Sbjct: 541 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNGTGIKGKLRITTRCLW 600

Query: 641 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENP 700
           LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELL+KMVRKYSGKRPEVIV+AVE+P
Sbjct: 601 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKMVRKYSGKRPEVIVMAVESP 660

Query: 701 GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ 760
           GGVLSE+LG RLSGKS + FGMSA RKAVD QPTKSHLN IRPDGN+DL SEDNSSQESQ
Sbjct: 661 GGVLSEELGARLSGKSYSGFGMSASRKAVDEQPTKSHLNSIRPDGNNDLPSEDNSSQESQ 720

Query: 761 GYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEP 820
           GY++E   LLPEEDY+++N NLTETQS D E +ED W PFITPSSP NEL K++EGSV+ 
Sbjct: 721 GYHLESERLLPEEDYDTTNLNLTETQSFDNEGLEDFWKPFITPSSPANELAKDHEGSVQH 780

Query: 821 SKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVA 880
            KN LEISN  EE SD++SLKTSNS     KPVK NKWKPEE+K+LIKLRGQLHARFQV 
Sbjct: 781 LKNALEISNEREEVSDDKSLKTSNSDVNSSKPVKRNKWKPEEIKKLIKLRGQLHARFQVT 840

Query: 881 KGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAI 884
           +GRMALWEEIS  ML DG+NRSPGQCKSLW SLVQK++Q+SK EK  K+SWPYLEEM  I
Sbjct: 841 RGRMALWEEISNGMLADGINRSPGQCKSLWTSLVQKFEQESKSEKKSKKSWPYLEEMSGI 900

[Close]

BLAST of Carg20176 vs. TrEMBL
Match: tr|A0A1S3CN32|A0A1S3CN32_CUCME (ribonuclease J isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1)

HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 744/910 (81.76%), Postives = 785/910 (86.26%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRP----RTIYCYSGTPKVLGN 100
           MQLEFLGGSS+L S H  PY+  MA+FGALSLCPCSPL RP    RTIYC  G+P VLG 
Sbjct: 1   MQLEFLGGSSILGSSHSAPYKQRMASFGALSLCPCSPLLRPHHPVRTIYCCHGSPTVLGK 60

Query: 101 NVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL------------ 160
           NVS+V RKRPGRLEGA++SMEDSV+RKMEQFYEGSDGPPLRVLPIGGL            
Sbjct: 61  NVSKVPRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGN 120

Query: 161 ----VLSDQ-----------------------------------------------VIPA 220
               +L D                                                VIPA
Sbjct: 121 YDRYILIDAGVMFPDHDELGVQKIIPDTTFIKRWSHKIEAVVITHGHEDHIGALPWVIPA 180

Query: 221 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 280
           LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC
Sbjct: 181 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 240

Query: 281 CGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTI 340
           CGLVLRC DGTILHTGDWKIDESPLDGKVFDRETLE+LSKEGVTLMMSDSTNVLSPGRTI
Sbjct: 241 CGLVLRCTDGTILHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSPGRTI 300

Query: 341 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAA 400
           SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYL+AA
Sbjct: 301 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAA 360

Query: 401 WKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 460
           WKDGKAPIDPSTLVKVEDI+AYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM
Sbjct: 361 WKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 420

Query: 461 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHF 520
           ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGH YRGELEE+LQIVKPQHF
Sbjct: 421 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVKPQHF 480

Query: 521 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLK 580
           LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLG+ENLQLK
Sbjct: 481 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQLK 540

Query: 581 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLW 640
           YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQS+DGLN TGIKGKLRITTRCLW
Sbjct: 541 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNGTGIKGKLRITTRCLW 600

Query: 641 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENP 700
           LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELL+KMVRKYSGKRPEVIV+AVE+P
Sbjct: 601 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKMVRKYSGKRPEVIVMAVESP 660

Query: 701 GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ 760
           GGVLSE+LG RLSGKS + FGMSA RKAVD QPTKSHLN IRPDGN+DL SEDNSSQESQ
Sbjct: 661 GGVLSEELGARLSGKSYSGFGMSASRKAVDEQPTKSHLNSIRPDGNNDLPSEDNSSQESQ 720

Query: 761 GYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEP 820
           GY++E   LLPEEDY+++N NLTETQS D E +ED W PFITPSSP NEL K++EGSV+ 
Sbjct: 721 GYHLESERLLPEEDYDTTNLNLTETQSFDNEGLEDFWKPFITPSSPANELAKDHEGSVQH 780

Query: 821 SKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVA 880
            KN LEISN  EE SD++SLKTSNS     KPVK NKWKPEE+K+LIKLRGQLHARFQV 
Sbjct: 781 LKNALEISNEREEVSDDKSLKTSNSDVNSSKPVKRNKWKPEEIKKLIKLRGQLHARFQVT 840

Query: 881 KGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAI 884
           +GRMALWEEIS  ML DG+NRSPGQCKSLW SLVQK+ ++SK EK  K+SWPYLEEM  I
Sbjct: 841 RGRMALWEEISNGMLADGINRSPGQCKSLWTSLVQKF-EESKSEKKSKKSWPYLEEMSGI 900

[Close]

BLAST of Carg20176 vs. TrEMBL
Match: tr|A0A0A0LRV7|A0A0A0LRV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002120 PE=4 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 737/910 (80.99%), Postives = 786/910 (86.37%), Query Frame = 0


Query: 41  MQLEFLGGSSVLRSPHLGPYRHTMAAFGALSLCPCSPLPRP----RTIYCYSGTPKVLGN 100
           MQ EFLG  S+L SPH  PY+  MA+FGALSLCPCSPL RP    RTIYC  G+P VLG 
Sbjct: 1   MQSEFLGSFSILGSPHSAPYKQRMASFGALSLCPCSPLLRPHHPVRTIYCCRGSPTVLGK 60

Query: 101 NVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPIGGL------------ 160
           NVS+V RKRPGRLEGA++SMEDSV+RKMEQFYEGSDGPPLRVLPIGGL            
Sbjct: 61  NVSKVPRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGN 120

Query: 161 ----VLSDQ-----------------------------------------------VIPA 220
               +L D                                                VIPA
Sbjct: 121 YDRYILIDAGVMFPDHDELGVQKIIPDTTFIKRWSHKIEAVVITHGHEDHIGALPWVIPA 180

Query: 221 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHSIPDC 280
           LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRK+FTAGPFEIEPIRVTHSIPDC
Sbjct: 181 LDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKKFTAGPFEIEPIRVTHSIPDC 240

Query: 281 CGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSPGRTI 340
           CGLVLRC DGTILHTGDWKIDESPLDGKVFDRETLE+LSKEGVTLMMSDSTNVLSPGRTI
Sbjct: 241 CGLVLRCTDGTILHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSPGRTI 300

Query: 341 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAA 400
           SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYL+AA
Sbjct: 301 SESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAA 360

Query: 401 WKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 460
           WKDGKAPIDPSTLVKVEDI+AYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM
Sbjct: 361 WKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLSKEDM 420

Query: 461 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVKPQHF 520
           ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGH YRGELEE+LQIVKPQHF
Sbjct: 421 ILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVKPQHF 480

Query: 521 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKENLQLK 580
           LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLG+ENLQLK
Sbjct: 481 LPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQLK 540

Query: 581 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITTRCLW 640
           YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQS+DGLN TGIKGKLRITTRCLW
Sbjct: 541 YSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNGTGIKGKLRITTRCLW 600

Query: 641 LDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLAVENP 700
           LDKGKLLDALHKAAHAALSSCP+NCPLAHMERTV+ELL+KMVRKYSGKRPEVIV+AVE+P
Sbjct: 601 LDKGKLLDALHKAAHAALSSCPLNCPLAHMERTVAELLRKMVRKYSGKRPEVIVMAVESP 660

Query: 701 GGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSSQESQ 760
            GVL+E+LG RL+GKS++ FGMSA RKAVDGQPTKSHLN IRPDGN+DLHSEDNSSQESQ
Sbjct: 661 VGVLAEELGARLAGKSNSGFGMSASRKAVDGQPTKSHLNSIRPDGNNDLHSEDNSSQESQ 720

Query: 761 GYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEGSVEP 820
           GY++E   LLPEEDY+++N NLTETQS D E +ED W PFITPSSP NEL  +NEGSV+ 
Sbjct: 721 GYHLESERLLPEEDYDTTNLNLTETQSIDNEGLEDFWKPFITPSSPANELAMDNEGSVQH 780

Query: 821 SKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHARFQVA 880
           S++TLEISN  EE SD++SLKTSNS     KPVK NKWKPEE+K+LIKLRG+LH RFQVA
Sbjct: 781 SESTLEISNEREEVSDDKSLKTSNSDVNSSKPVKRNKWKPEEIKKLIKLRGELHDRFQVA 840

Query: 881 KGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEEMDAI 884
           +GRMALWEEIS  M  DG+NRSPGQCKSLWASLVQK++Q+SK EK  K+ WPYLEEM  I
Sbjct: 841 RGRMALWEEISNGMSADGINRSPGQCKSLWASLVQKFEQESKSEKKSKKGWPYLEEMSGI 900

[Close]

BLAST of Carg20176 vs. TrEMBL
Match: tr|A0A1S4E4Q7|A0A1S4E4Q7_CUCME (ribonuclease J isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1)

HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 659/734 (89.78%), Postives = 691/734 (94.14%), Query Frame = 0


Query: 150 VIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHS 209
           VIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHS
Sbjct: 45  VIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGPFEIEPIRVTHS 104

Query: 210 IPDCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTLMMSDSTNVLSP 269
           IPDCCGLVLRC DGTILHTGDWKIDESPLDGKVFDRETLE+LSKEGVTLMMSDSTNVLSP
Sbjct: 105 IPDCCGLVLRCTDGTILHTGDWKIDESPLDGKVFDRETLEQLSKEGVTLMMSDSTNVLSP 164

Query: 270 GRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTY 329
           GRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTY
Sbjct: 165 GRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTY 224

Query: 330 LEAAWKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLS 389
           L+AAWKDGKAPIDPSTLVKVEDI+AYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLS
Sbjct: 225 LDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLS 284

Query: 390 KEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYRGELEEILQIVK 449
           KEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGH YRGELEE+LQIVK
Sbjct: 285 KEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHGYRGELEEVLQIVK 344

Query: 450 PQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKEN 509
           PQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLG+EN
Sbjct: 345 PQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGREN 404

Query: 510 LQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNETGIKGKLRITT 569
           LQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQS+DGLN TGIKGKLRITT
Sbjct: 405 LQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSVDGLNGTGIKGKLRITT 464

Query: 570 RCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKYSGKRPEVIVLA 629
           RCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELL+KMVRKYSGKRPEVIV+A
Sbjct: 465 RCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKMVRKYSGKRPEVIVMA 524

Query: 630 VENPGGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDGNDDLHSEDNSS 689
           VE+PGGVLSE+LG RLSGKS + FGMSA RKAVD QPTKSHLN IRPDGN+DL SEDNSS
Sbjct: 525 VESPGGVLSEELGARLSGKSYSGFGMSASRKAVDEQPTKSHLNSIRPDGNNDLPSEDNSS 584

Query: 690 QESQGYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSSPVNELVKENEG 749
           QESQGY++E   LLPEEDY+++N NLTETQS D E +ED W PFITPSSP NEL K++EG
Sbjct: 585 QESQGYHLESERLLPEEDYDTTNLNLTETQSFDNEGLEDFWKPFITPSSPANELAKDHEG 644

Query: 750 SVEPSKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKRLIKLRGQLHAR 809
           SV+  KN LEISN  EE SD++SLKTSNS     KPVK NKWKPEE+K+LIKLRGQLHAR
Sbjct: 645 SVQHLKNALEISNEREEVSDDKSLKTSNSDVNSSKPVKRNKWKPEEIKKLIKLRGQLHAR 704

Query: 810 FQVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREKTIKRSWPYLEE 869
           FQV +GRMALWEEIS  ML DG+NRSPGQCKSLW SLVQK++Q+SK EK  K+SWPYLEE
Sbjct: 705 FQVTRGRMALWEEISNGMLADGINRSPGQCKSLWTSLVQKFEQESKSEKKSKKSWPYLEE 764

Query: 870 MDAILSDSEAVASK 884
           M  ILSDSEAVA+K
Sbjct: 765 MSGILSDSEAVATK 778

[Close]

BLAST of Carg20176 vs. TrEMBL
Match: tr|A0A061FYV1|A0A061FYV1_THECC (RNA-metabolising metallo-beta-lactamase family protein OS=Theobroma cacao OX=3641 GN=TCM_014612 PE=4 SV=1)

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 625/925 (67.57%), Postives = 711/925 (76.86%), Query Frame = 0


Query: 31   FEFTPEPPQHMQLEFLGGSSVLRSPHLGPYR-----HTMAAFGALSLCP----CSPLPRP 90
            F F     + MQL FLGG S   S +   ++       MAA  A SLCP    C P PR 
Sbjct: 82   FFFFVNLKEQMQLGFLGGLSFSYSLYFTSFKPIKAPTKMAASTAHSLCPYGLYCRPNPRH 141

Query: 91   RTIYCYSGTPKVLGNNVSRVHRKRPGRLEGARKSMEDSVKRKMEQFYEGSDGPPLRVLPI 150
            R I C  G+P  LG   ++V RK+ GRL+GARKSMEDSV+RKMEQFYEG+ GPPLRVLPI
Sbjct: 142  RYISCSVGSPTPLGTRRTKVPRKKSGRLDGARKSMEDSVQRKMEQFYEGTAGPPLRVLPI 201

Query: 151  GGL----------------VLSDQ------------------------------------ 210
            GGL                +L D                                     
Sbjct: 202  GGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITH 261

Query: 211  -----------VIPALDSHTPIYASSFTVELIKKRLKENGIFVPSRLKVFKMRKRFTAGP 270
                       VIPALDSHTPIYASSFT+ELIKKRLKENGIFVPSRLK+FK RKRF AGP
Sbjct: 262  GHEDHIGALPWVIPALDSHTPIYASSFTMELIKKRLKENGIFVPSRLKIFKTRKRFMAGP 321

Query: 271  FEIEPIRVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGKVFDRETLEELSKEGVTL 330
            FEIEP+RVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGK+FDR+ LE+LSKEGVTL
Sbjct: 322  FEIEPLRVTHSIPDCCGLVLRCADGTILHTGDWKIDESPLDGKIFDRQFLEDLSKEGVTL 381

Query: 331  MMSDSTNVLSPGRTISESVVADALLRRISAAKGRVITTQFASNIHRLGSVKAAADLTGRK 390
            MMSDSTNVLSPGRTISES VADALLR ISAAKGR+ITTQFASNIHRLGSVKAAADLTGRK
Sbjct: 382  MMSDSTNVLSPGRTISESSVADALLRHISAAKGRIITTQFASNIHRLGSVKAAADLTGRK 441

Query: 391  LVFVGMSLRTYLEAAWKDGKAPIDPSTLVKVEDIEAYAPKDLLIVTTGSQAEPRAALNLA 450
            LVFVGMSLRTYL+AAWKDGKAPIDPSTLVKVEDI+AYAPKDL+IVTTGSQAEPRAALNLA
Sbjct: 442  LVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLIIVTTGSQAEPRAALNLA 501

Query: 451  SYGSSHSLKLSKEDMILYSAKVIPGNESRVMKMLNRISEIGSNIIMGKNELLHTSGHAYR 510
            SYGSSHS KL+KED+ILYSAKVIPGNESRVMKMLNRISEIGS I+MGKNE LHTSGH YR
Sbjct: 502  SYGSSHSFKLNKEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHGYR 561

Query: 511  GELEEILQIVKPQHFLPIHGELLFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVL 570
            GELEE+L+IVKPQHFLPIHGELLFLKEHELLG+STGIRHTTVIKNGEMLGVSHLRNRRVL
Sbjct: 562  GELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVL 621

Query: 571  SNGFTSLGKENLQLKYSDGDKAFGSSSELFVDERLKIATDGIIVVSMEILRPQSIDGLNE 630
            SNGF+SLGKENLQL YSDGDKA+G+S+EL +DERL+IA+DGIIVVSMEILRPQ IDG+ E
Sbjct: 622  SNGFSSLGKENLQLMYSDGDKAYGTSTELCIDERLRIASDGIIVVSMEILRPQKIDGIME 681

Query: 631  TGIKGKLRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLKKMVRKY 690
              +KGK+RITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPL HMERTVSE+L+KMVRKY
Sbjct: 682  NSLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLGHMERTVSEVLRKMVRKY 741

Query: 691  SGKRPEVIVLAVENPGGVLSEQLGRRLSGKSDTRFGMSALRKAVDGQPTKSHLNGIRPDG 750
            SGKRPEVI +A+ENP GV S++L  RLSG  +  F +  LRK VDG P +S  N I+ + 
Sbjct: 742  SGKRPEVIAIALENPAGVFSDELNERLSGNYNVGFEIPTLRKVVDGHPKRSQPNKIKAED 801

Query: 751  NDDLHSEDNSSQESQGYYIEPGSLLPEEDYNSSNSNLTETQSSDTEDMEDLWTPFITPSS 810
            + +LH E+ S Q  +    E   LLPEED  +S+ +  E  + ++E  ++ W  FIT SS
Sbjct: 802  DSNLHLENTSEQSLEVSDGEVEKLLPEEDTTTSSPDSLERHTPNSEGSDEFWKSFITSSS 861

Query: 811  PVNELVKENEGSVEPSKNTLEISNGGEEGSDEESLKTSNSSEKPLKPVKSNKWKPEEMKR 870
            PVN LV +N G V   +   ++ + G   S ++S +  +S  K  KP K NKWKPEE+K+
Sbjct: 862  PVNNLVNDNNGLVPKKEYKSQLKSDGTASSGDDS-EMPSSQPKSSKPAKRNKWKPEEVKK 921

Query: 871  LIKLRGQLHARFQVAKGRMALWEEISTCMLGDGMNRSPGQCKSLWASLVQKYKQDSKREK 884
            LIK+RG+LH+RFQV KGRMALWEEIST ++ +G++RSPGQCKSLW SLVQKY ++SK EK
Sbjct: 922  LIKMRGKLHSRFQVVKGRMALWEEISTSLMAEGISRSPGQCKSLWTSLVQKY-EESKGEK 981

The following BLAST results are available for this feature:

BLAST of Carg20176 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531411.1	0.0e+00	90.62	uncharacterized protein LOC111793659 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023531412.1	0.0e+00	90.51	uncharacterized protein LOC111793659 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022934023.1	0.0e+00	90.10	uncharacterized protein LOC111441254 isoform X1 [Cucurbita moschata]	[more]
XP_022934026.1	0.0e+00	89.99	uncharacterized protein LOC111441254 isoform X4 [Cucurbita moschata]	[more]
XP_023516476.1	0.0e+00	85.21	uncharacterized protein LOC111780336 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg20176 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63420.1	7.4e-305	63.13	RNA-metabolising metallo-beta-lactamase family protein	[more]
AT2G38250.1	1.2e-07	31.25	Homeodomain-like superfamily protein	[more]
AT5G01380.1	1.2e-07	34.12	Homeodomain-like superfamily protein	[more]
AT1G76890.2	3.4e-07	28.18	Duplicated homeodomain-like superfamily protein	[more]
AT3G25990.1	3.4e-07	29.84	Homeodomain-like superfamily protein	[more]

BLAST of Carg20176 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84W56\|RNJ_ARATH	1.3e-303	63.13	Ribonuclease J OS=Arabidopsis thaliana OX=3702 GN=RNJ PE=1 SV=1	[more]
sp\|M4MR97\|RNJ_SINM2	1.4e-58	32.70	Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) OX=1286...	[more]
sp\|P54122\|RNJ_CORGL	1.7e-56	33.67	Ribonuclease J OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JC...	[more]
sp\|A0QVT2\|RNJ_MYCS2	2.7e-54	34.02	Ribonuclease J OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246...	[more]
sp\|Q72JJ7\|RNJ_THET2	1.0e-53	30.51	Ribonuclease J OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) O...	[more]

BLAST of Carg20176 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLZ6\|A0A1S3CLZ6_CUCME	0.0e+00	81.87	ribonuclease J isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1	[more]
tr\|A0A1S3CN32\|A0A1S3CN32_CUCME	0.0e+00	81.76	ribonuclease J isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1	[more]
tr\|A0A0A0LRV7\|A0A0A0LRV7_CUCSA	0.0e+00	80.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002120 PE=4 SV=1	[more]
tr\|A0A1S4E4Q7\|A0A1S4E4Q7_CUCME	0.0e+00	89.78	ribonuclease J isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502342 PE=4 SV=1	[more]
tr\|A0A061FYV1\|A0A061FYV1_THECC	0.0e+00	67.57	RNA-metabolising metallo-beta-lactamase family protein OS=Theobroma cacao OX=364...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017877	Myb-like_dom
IPR011108	RMMBL
IPR036866	RibonucZ/Hydroxyglut_hydro

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20176-RA	Carg20176-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 791..852 e-value: 1.6E-15 score: 58.8
None	No IPR available	GENE3D	G3DSA:3.40.50.10710		coord: 279..432 e-value: 5.7E-45 score: 154.4
None	No IPR available	PFAM	PF13837	Myb_DNA-bind_4	coord: 789..873 e-value: 3.9E-17 score: 62.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 734..763
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 705..720
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 662..789
None	No IPR available	PANTHER	PTHR43694	FAMILY NOT NAMED	coord: 90..144 coord: 149..633
None	No IPR available	CDD	cd12203	GT1	coord: 789..851 e-value: 2.47108E-20 score: 85.7947
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	G3DSA:3.60.15.10		coord: 140..278 e-value: 7.5E-43 score: 148.8
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	SSF56281	Metallo-hydrolase/oxidoreductase	coord: 156..487
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 428..459 e-value: 2.3E-6 score: 27.4
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 783..847 score: 7.433

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20176	Cla019268	Watermelon (97103) v1	carwmB1047
Carg20176	Csa1G002120	Cucumber (Chinese Long) v2	carcuB1062
Carg20176	MELO3C026230	Melon (DHL92) v3.5.1	carmeB1014
Carg20176	ClCG06G017790	Watermelon (Charleston Gray)	carwcgB1019
Carg20176	CSPI01G00630	Wild cucumber (PI 183967)	carcpiB1083
Carg20176	Cucsa.157420	Cucumber (Gy14) v1	carcgyB1161
Carg20176	CmaCh11G000420	Cucurbita maxima (Rimu)	carcmaB1449
Carg20176	CmaCh10G000710	Cucurbita maxima (Rimu)	carcmaB1448
Carg20176	CmoCh11G000430	Cucurbita moschata (Rifu)	carcmoB1403
Carg20176	CmoCh10G000660	Cucurbita moschata (Rifu)	carcmoB1402
Carg20176	Lsi06G016330	Bottle gourd (USVL1VR-Ls)	carlsiB955
Carg20176	Cp4.1LG18g08850	Cucurbita pepo (Zucchini)	carcpeB1456
Carg20176	Cp4.1LG04g16060	Cucurbita pepo (Zucchini)	carcpeB1458
Carg20176	CsGy1G000640	Cucumber (Gy14) v2	carcgybB1031
Carg20176	MELO3C026230.2	Melon (DHL92) v3.6.1	carmedB1026
Carg20176	CsaV3_1G000660	Cucumber (Chinese Long) v3	carcucB1095
Carg20176	Cla97C06G127520	Watermelon (97103) v2	carwmbB1105
Carg20176	Bhi02G000400	Wax gourd	carwgoB1226

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20176	Carg10290	Silver-seed gourd	carcarB396

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20176	Silver-seed gourd	carcarB399
Carg20176	Silver-seed gourd	carcarB446
Carg20176	Silver-seed gourd	carcarB484
Carg20176	Cucurbita maxima (Rimu)	carcmaB1450
Carg20176	Cucurbita moschata (Rifu)	carcmoB1404
Carg20176	Cucurbita pepo (Zucchini)	carcpeB1457
Carg20176	Melon (DHL92) v3.5.1	carmeB1015
Carg20176	Melon (DHL92) v3.6.1	carmedB1027