Carg20160 (gene) Silver-seed gourd

NameCarg20160
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_168 : 474598 .. 477363 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGCAACTAGTCAGTGAGACGGTGAATAATGAAGTGGCTTCATCTCTTAAGAGAGAACTTTCTCGCGGGGAGACCGAGGGTCGGGATTTTTTCATTATTTATTTTCCTTACTCCCATCTCTGGAGGGGGAGTGTATATGGTCGGGATTGCGGAATTATTTTCTAACCTAAGTTCGATTCTCAAAATTTTTTATAAATTTTATTTTTGTAAGATACGATCTAAAATCCTAATATATTAACATACTTACTCATAAAATTAAAGACAACTAAATACCGACATTTTTTTAATGATAGGTTAAAATAACAAAAATATTAATAAAAGTTCACAAACAAACCCAAATCAATCTATAATTATTTTAAAAAAAATAATAATAAGGTGAAAAAATTATAACATATTAGCATAATTCGTCGTAAAATTAAAGACAACTATATACCGACATTTGTTAACCATGGTTAAAATAACAAAAATATTAAGAATAGATCATTTCGCACTGAACTATACTTAAGGAAAGAGAAGGCGAAGTAGAAGTTGGAAGGAAGCCCGCTCTTAGAAAGAGTCTAAAGTCTAAAGCTAGTCAAGTATGTATAGTTAGTAGGATTAGTTGTTACAGGTTTCCCTATAAAGGATTTCCAACTTCCCCCGTACTTTCTCATAGTTTCGAGTGAGATCTTTCCAGTCTTCTTCAGATAAGCCCGAGATTCCGTCTAAGTTGCATGAAATTAAATAAACAATAACCATGATTAATTTAGAGATACTGTATATAATAAAAATAAAAAATATATAAAAATATTTTAATTAAAATATGTTTATTTACTCATGTGAGAGTCCTAATCTATTAATAACAATAACCATGATTAATTTAGAGATACTGTATATAATAAAAATAAAAAATATATAAAAATATTTTAATTAAAATATGTTTATTTACTCATGTGAGAGTCCTAATCTATTAAATATATATATATATATATATATATATATATATATATATAAATAAATTTATGAACATAACAAAATACCTAGTTTTTGAAAATAATTAAATAACAAAAATATTAAAGATAGATCATAAAATTAAATAAACAATAAAAATGATTAGTTTAAAAATATTGTATATAACAAAAATAAAAAATATTTAAAAATATTTTAATTTAAATATGTTTATTTATACGTGATCTTAGAGAATCCTAACTAATAAAAAATTAAAAACATATACAAATTGTGATATAATAATGTCGTAACAAGATAATAAATACATCTAAATTTAATAAATGTATGTATAAATAATAATTAATAAACCTAAAAGAGATCATGAACGGACAACATGAAATAAAAGAGATCAAAATGGAATATTTTCTAAATATGAAGAATTTGATTAGTCAATTCTAACACTTCAAAACTAATTTCAACACACTGCCAATGCAGGAAAAAATTACTTTTATTTGGTCATTTAATTTTTTAATTTTCAAAGTAGATAGAAAAATAAGAAAGAAGTAACATTTATAAATTTAATTTTTAAAAACAAAAAAATCAAATACAATTTTTAATTTAATAAATGTATGTAAATATATATAATTTATTTACTAAAAGAGATAATGAACGGATTAACATGAAATTTAAATAGATTATAAAATGGAATATTTATTTATTTAGAGTAATAGTTCAAAGGTTAATAATCGCAAATAAATAAATAAATAAATAAAATTTAATTTTTTTTTTCTGCATCATTTCTTCTTTTATCCTTCGCACCCTCCGGCCGGGGCTGCCGCCGCCGCCATCGTGAGCATTGGAGCTCAACTATCTCTCTATCAGTTCTCTGACTAGCGAAAGAAAAAAGAAATTGAAACTAAAATTTGTCTCCATAGCTGCCGAGGACCGAGAGCTTCGTCTAGAAGAAGCAATGCCGGCTTCCGATTCAAGTTCTTGATGAGACTTGCGATATCAAGGTTCTACTTCTACTTCTACTACTCTTCTTTCTCCAAAATTTTCAGTTATATTTGTCCCTATCTGTTTCTCAAGAAAACATTTCTGAAAACTTTGCACTTGTTTAATTTTCTTTGCCACTTTCTTTTGACGATAATCAGGTGTATACGAGGCAGTAGCATTAACAACATCCTTACCTCCCACATTGGCAACAACGCCACGACAGTCCTCTATTATCGCCGTCGGATTTCGCTCTTTCACTGGTACTGCATTTTGATTGCGATTTCTCTTTCGTTTTTTAAGCCCTAGGTTACGATTACGACGTTCGTAATGTTCATTAAATTCAGCAAAATTGAATTAGCATTAGAAATCTAAGGGAATTAATTTCCCTTGTTATCTTCTTCACTCTCTGATGAATATTTTGACTGCTTAATATCCAAAATCTTTCCTGTTGGCTTTAGATTTTAGACGAGAGTTCCATTAATCTTTCTATGTCGAATTTTGAGTTGCTGACGTCAGCCAATGGTATGGTTCAGACTTCAGTAATATTTCCGAAGTGTTATATGAATCTGTAATTATTTACTTAAATTTAATCACTAATCTACGGCTTCCTCCTCAGGTCCAATCTACACTAGGAGAAAACTCATCATCGGGATCGGGAACGAGCTTTCTGCTTTCTGCTACTTCTCGTCGGCGAGGGAAACCCGAGATTGGACCGATACCCTAGAGTCCCAGAGGGAGGAGAAGAAGAAATATGTCGTATCAGGGTTTCGGCAAGGCTTCAGGACCAAGCGCACCGCCGAAACTGCAACATTCTTTCGGAAATTCAGCAATTCCTGA

mRNA sequence

ATGGACGAGCAACTAGTCAGTGAGACGGTGAATAATGAAGTGGCTTCATCTCTTAAGAGAGAACTTTCTCGCGGGGAGACCGAGGCTGCCGAGGACCGAGAGCTTCGTCTAGAAGAAGCAATGCCGGCTTCCGATTCAAGTGTATACGAGGCAGTAGCATTAACAACATCCTTACCTCCCACATTGGCAACAACGCCACGACAGTCCTCTATTATCGCCGTCGGATTTCGCTCTTTCACTGGTCCAATCTACACTAGGAGAAAACTCATCATCGGGATCGGGAACGAGCTTTCTGCTTTCTGCTACTTCTCGTCGGCGAGGGAAACCCGAGATTGGACCGATACCCTAGAGTCCCAGAGGGAGGAGAAGAAGAAATATGTCGTATCAGGGTTTCGGCAAGGCTTCAGGACCAAGCGCACCGCCGAAACTGCAACATTCTTTCGGAAATTCAGCAATTCCTGA

Coding sequence (CDS)

ATGGACGAGCAACTAGTCAGTGAGACGGTGAATAATGAAGTGGCTTCATCTCTTAAGAGAGAACTTTCTCGCGGGGAGACCGAGGCTGCCGAGGACCGAGAGCTTCGTCTAGAAGAAGCAATGCCGGCTTCCGATTCAAGTGTATACGAGGCAGTAGCATTAACAACATCCTTACCTCCCACATTGGCAACAACGCCACGACAGTCCTCTATTATCGCCGTCGGATTTCGCTCTTTCACTGGTCCAATCTACACTAGGAGAAAACTCATCATCGGGATCGGGAACGAGCTTTCTGCTTTCTGCTACTTCTCGTCGGCGAGGGAAACCCGAGATTGGACCGATACCCTAGAGTCCCAGAGGGAGGAGAAGAAGAAATATGTCGTATCAGGGTTTCGGCAAGGCTTCAGGACCAAGCGCACCGCCGAAACTGCAACATTCTTTCGGAAATTCAGCAATTCCTGA

Protein sequence

MDEQLVSETVNNEVASSLKRELSRGETEAAEDRELRLEEAMPASDSSVYEAVALTTSLPPTLATTPRQSSIIAVGFRSFTGPIYTRRKLIIGIGNELSAFCYFSSARETRDWTDTLESQREEKKKYVVSGFRQGFRTKRTAETATFFRKFSNS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20160-RACarg20160-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33