Carg20143 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20143
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Sgf11 (Transcriptional regulation protein) protein
Location	Cucurbita_argyrosperma_scaffold_168 : 353156 .. 355764 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCAAATATTTCAGATAAGAAAACCAAAGACATTGTGAAGGAGAGAGAGACTGAGAGAAAAATTCCCGCTCTCTCTCTCTCTCTCTCTCTATATTGCTTCCTCCATAGGGTTTCCTCTTTCCGCTTCCACTGTTTTTTCTTCTCTTCTTCATGTCATTCGGCCCTCACTTCCGCAGCATTTCTCTCAAATTTCTCTAAATTCGTTTCGGCAATTGATCCGAGTTTTCCTGCTTTCTCGCCGGTTCCATGGGTCTGGATGATTGGAGGAGCTCTCGTGCAGGTTAGTCGCGGTTTGCCGCCATTTCCTCATTGTTGAGAGCTCGTTTCGCGCTATGCTTTTATGAGTTTCTTTCTTTTTCTTCTTGCTATTCTGGTATATGATTTTGCGCTGTTTCTCTTTTGTTTTGTTTTATTATGTTGCTTTCTTTGTTCGATTGATTATTTGGTTATTCTGCTTGCATTGCATGTCATTTGATTGTTCGTATTATGAACAGTTGAACGAGTCGTCGTTCTTCCTGCGTGCTCGTTTTTGTTCTTGCCTGCGAACTATATGATTTTTGGTATTGAACGAGTTATATAGTTAGACAAATCAGTTGATGTTTTTTCTGGCTGAGCACTACCGCTTTTTTTTTTTTTTTTTTAATCAACATATTTAATTTTGTACTTTAGCCCTATATTTCGAGTGTAATTTAGCGACGAGGAAATGATTTCGTTATTACTGCAGGTGTGTTCGTCTCGCTGTTTTTTTTTTTTTTTCTTCTTTCTTTCTTTCTTTCTTTTTGCAGTTAGCTTCTTTGATTCTTGTGTGTGTGTGTGTGTGTGTGTCTTTCCATGATTATAAAGATGTTTTTATTCCCAGCGGTGTAGAATCTCTTCCTTACGGTACATAATACATTTGCCTGGTCTCAATGGTATGCTCAGTTGGAAATGGGAGAATGGCAGTGATGACAAGGCTTCTGGCTGCAGGGAGTTTCTCCCGAACTATTGCTGGTAAACCGAGACATTATAAGTTTTTCATTTGTCTTTTCATTTTTTTCTACATTTTTAATGATTTTGTTTGTTTGGTTGTCAGAAGTCATTGTTGGTTAGATTGATCATTGTAGGAATAATTCCACGACCATCTTTTTAGTTACATGTCATCTTTCATTCAGAGTCATAATTAATGTCCTTTTACTATTGGACAGAGGAAGTTGGTCATCAGAAATTAGCTTCTGAATTTATCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGGTGTGTACCTAATCCTACTTTAATTATTGCTTGGTAAAGTGTTGAATTTTTTTATTTTTTATTTACAAACGAACATTCTTTTTTTATTATAGAATTCATATTTTTTATGGTACTGTGGGATGGGTAATGACGTTATTGTTAGTCGGTGGTTGGATTTTTGAAGCAGCTTGTTGACTCTCTCTCTCTCTCTCTCTATGTATATATTTACAGATATGCACGTCTTTGGTTTGAAGCCTATGGTTGATCCTCTGAACTTGGTAAGGTTTGATGACATTAGTAGTTTATCTATTTAATGTCCTGTCATTTTTACAACGATGAAGCAAAACAATTTTCTCAGACGGTCCTTTTCAGATCTTGTTTTACCACTTCGCAGCTTTTGTTACTTTTTTGGATAAGGTTTATCCAGTGTATAATAATCTACAATCTATTGTTTTCTAATTCATTTAAATTTACCTTTTCCGTCCTTTTATTTGATCGTGTAGGTTTCCTGCAATATTTGTAAGAAGCCAGTAAAGGCCAGTCAATATATCATTCATTCAGGTTTGTTATTATTATTATTATTGTTGTTATTATAATTTTTGTGGGTAGGGCACTTTCTCGTTTTCTGCAGTCAAATTATGTGAAGTTTCCCGCCTTTTGTTGTTGATATGGTTTGAATGTGTACTTTCATTAATGTTTTAAACTCTTTTTTAGATCTTAGCGTATCTGTGTCCAATGTTGACATCAACTCACAAAGATAGGTTTCCATGCTTGTCTTCTGCTATACTCAGCTTAATGCTATGGTTAGATCTCATGTTCATAGTGTTTATACCCATTTGAAGAAATATTTTATTTTGAACGTTATAGGGATTCCATCAATACTTGTTTGGGATGTAATAAATTCTGTGGTCATTTTGTACTCCGATTCAAATCTTTTGGTCATATCAATCGTAATCCGAACTTGCTACTGCTTTTTGTTCTGTTTTCTTACCTGTTTATAATTAATTTTTACCCTATATTATGGTTGAGGTATATTAGTATCAGTAAGAGGTTTGTATTATATTTTGTTAGTTTAACTTTACACTTGAGTGGACCAATGGATTTTGAAAATTATTGTCAGGATCCCCATTGTAAACTCTTATATGCATTAGGTTGGACATGATGCTTTCCTGAGTTATCTTCATGTCATTTTATCAGAACTATGCAGGTCACTAGGTTCCGGACAAGGGATTATTATGGACCTTGATAGTGGGATGGGCCATAGGAAACACTCAAGGAAGGAGAAGAAAAAGTTGCTACCTGCTGATGCTAGTATCCTTCCATATCACATTGATTTTCTGATTCTAATTGGAAGATGA

mRNA sequence

GTTCAAATATTTCAGATAAGAAAACCAAAGACATTGTGAAGGAGAGAGAGACTGAGAGAAAAATTCCCGCTCTCTCTCTCTCTCTCTCTCTATATTGCTTCCTCCATAGGGTTTCCTCTTTCCGCTTCCACTGTTTTTTCTTCTCTTCTTCATGTCATTCGGCCCTCACTTCCGCAGCATTTCTCTCAAATTTCTCTAAATTCGTTTCGGCAATTGATCCGAGTTTTCCTGCTTTCTCGCCGGTTCCATGGGTCTGGATGATTGGAGGAGCTCTCGTGCAGTTGGAAATGGGAGAATGGCAGTGATGACAAGGCTTCTGGCTGCAGGGAGTTTCTCCCGAACTATTGCTGAGGAAGTTGGTCATCAGAAATTAGCTTCTGAATTTATCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATATGCACGTCTTTGGTTTGAAGCCTATGGTTGATCCTCTGAACTTGGTTTCCTGCAATATTTGTAAGAAGCCAGTAAAGGCCAGTCAATATATCATTCATTCAGAACTATGCAGGTCACTAGGTTCCGGACAAGGGATTATTATGGACCTTGATAGTGGGATGGGCCATAGGAAACACTCAAGGAAGGAGAAGAAAAAGTTGCTACCTGCTGATGCTAGTATCCTTCCATATCACATTGATTTTCTGATTCTAATTGGAAGATGA

Coding sequence (CDS)

ATGGGTCTGGATGATTGGAGGAGCTCTCGTGCAGTTGGAAATGGGAGAATGGCAGTGATGACAAGGCTTCTGGCTGCAGGGAGTTTCTCCCGAACTATTGCTGAGGAAGTTGGTCATCAGAAATTAGCTTCTGAATTTATCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATATGCACGTCTTTGGTTTGAAGCCTATGGTTGATCCTCTGAACTTGGTTTCCTGCAATATTTGTAAGAAGCCAGTAAAGGCCAGTCAATATATCATTCATTCAGAACTATGCAGGTCACTAGGTTCCGGACAAGGGATTATTATGGACCTTGATAGTGGGATGGGCCATAGGAAACACTCAAGGAAGGAGAAGAAAAAGTTGCTACCTGCTGATGCTAGTATCCTTCCATATCACATTGATTTTCTGATTCTAATTGGAAGATGA

Protein sequence

MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASILPYHIDFLILIGR

Homology

[Close]

BLAST of Carg20143 vs. NCBI nr
Match: XP_022955384.1 (uncharacterized protein LOC111457430 isoform X1 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60
           MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI
Sbjct: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60

Query: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120
           DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH
Sbjct: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120

Query: 121 RKHSRKEKKKLLPADASI 139
           RKHSRKEKKKLLPADA+I
Sbjct: 121 RKHSRKEKKKLLPADANI 138

[Close]

BLAST of Carg20143 vs. NCBI nr
Match: XP_022955387.1 (uncharacterized protein LOC111457430 isoform X3 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60
           MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI
Sbjct: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60

Query: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120
           DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH
Sbjct: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120

Query: 121 RKHSRKEKKKLLPADASI 139
           RKHSRKEKKKLLPADA+I
Sbjct: 121 RKHSRKEKKKLLPADANI 138

[Close]

BLAST of Carg20143 vs. NCBI nr
Match: XP_022955388.1 (uncharacterized protein LOC111457430 isoform X4 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60
           MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI
Sbjct: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60

Query: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120
           DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH
Sbjct: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120

Query: 121 RKHSRKEKKKLLPADASI 139
           RKHSRKEKKKLLPADA+I
Sbjct: 121 RKHSRKEKKKLLPADANI 138

[Close]

BLAST of Carg20143 vs. NCBI nr
Match: XP_022979839.1 (uncharacterized protein LOC111479416 isoform X2 [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 8.8e-71
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60
           MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI
Sbjct: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60

Query: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120
           DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQG IMDLDSGMGH
Sbjct: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGTIMDLDSGMGH 120

Query: 121 RKHSRKEKKKLLPADASI 139
           RKHSRKEKKKLLPADA++
Sbjct: 121 RKHSRKEKKKLLPADATV 138

[Close]

BLAST of Carg20143 vs. NCBI nr
Match: XP_022979843.1 (uncharacterized protein LOC111479416 isoform X5 [Cucurbita maxima])

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60
           MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI
Sbjct: 1   MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLI 60

Query: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGH 120
           DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQG IMDLDSGMGH
Sbjct: 61  DEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGTIMDLDSGMGH 120

Query: 121 RKHSRKEKKKLLPADAS 138
           RKHSRKEKKKLLPADA+
Sbjct: 121 RKHSRKEKKKLLPADAN 137

[Close]

BLAST of Carg20143 vs. TrEMBL
Match: tr|A0A1S3AXZ3|A0A1S3AXZ3_CUCME (uncharacterized protein LOC103483792 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 11  AVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGL 70
           +VGNGRMAVMTRL+AAGSFSRTIAEEVG QK ASEFICRELRDADEANLIDEEDMHVFGL
Sbjct: 4   SVGNGRMAVMTRLMAAGSFSRTIAEEVGQQKFASEFICRELRDADEANLIDEEDMHVFGL 63

Query: 71  KPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRKEKKK 130
           KPMVDPLNLV CNICKKPVKASQYIIHSELCRSLG GQG IMDLD GMGHRKHSRKEKKK
Sbjct: 64  KPMVDPLNLVCCNICKKPVKASQYIIHSELCRSLGFGQGTIMDLDGGMGHRKHSRKEKKK 123

Query: 131 LLPADASI 139
           LL +DA+I
Sbjct: 124 LLSSDANI 131

[Close]

BLAST of Carg20143 vs. TrEMBL
Match: tr|A0A0A0L549|A0A0A0L549_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151420 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.4e-58
Identity = 118/132 (89.39%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 11  AVGNGRMAVMTRLLAAGSFSRTIA----EEVGHQKLASEFICRELRDADEANLIDEEDMH 70
           +VGNGRMAVMTRLLAAGSFSRTIA    EEVGHQK ASEFICRELRDADEANLIDEEDMH
Sbjct: 4   SVGNGRMAVMTRLLAAGSFSRTIAGKSREEVGHQKFASEFICRELRDADEANLIDEEDMH 63

Query: 71  VFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRK 130
           VFGLKPMVDPLNLV CNICKKPVKASQYIIHSELCRSLG  QG IMDLD GMGHRKHSRK
Sbjct: 64  VFGLKPMVDPLNLVCCNICKKPVKASQYIIHSELCRSLGFRQGTIMDLDGGMGHRKHSRK 123

Query: 131 EKKKLLPADASI 139
           EKKKLL  DA+I
Sbjct: 124 EKKKLLSTDANI 135

[Close]

BLAST of Carg20143 vs. TrEMBL
Match: tr|A0A1S3AWW9|A0A1S3AWW9_CUCME (uncharacterized protein LOC103483792 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 9.7e-58
Identity = 117/132 (88.64%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 11  AVGNGRMAVMTRLLAAGSFSRTIA----EEVGHQKLASEFICRELRDADEANLIDEEDMH 70
           +VGNGRMAVMTRL+AAGSFSRTIA    EEVG QK ASEFICRELRDADEANLIDEEDMH
Sbjct: 4   SVGNGRMAVMTRLMAAGSFSRTIAGKSREEVGQQKFASEFICRELRDADEANLIDEEDMH 63

Query: 71  VFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRK 130
           VFGLKPMVDPLNLV CNICKKPVKASQYIIHSELCRSLG GQG IMDLD GMGHRKHSRK
Sbjct: 64  VFGLKPMVDPLNLVCCNICKKPVKASQYIIHSELCRSLGFGQGTIMDLDGGMGHRKHSRK 123

Query: 131 EKKKLLPADASI 139
           EKKKLL +DA+I
Sbjct: 124 EKKKLLSSDANI 135

[Close]

BLAST of Carg20143 vs. TrEMBL
Match: tr|A0A1S3AX95|A0A1S3AX95_CUCME (uncharacterized protein LOC103483792 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483792 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 9.7e-58
Identity = 117/132 (88.64%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 11  AVGNGRMAVMTRLLAAGSFSRTIA----EEVGHQKLASEFICRELRDADEANLIDEEDMH 70
           +VGNGRMAVMTRL+AAGSFSRTIA    EEVG QK ASEFICRELRDADEANLIDEEDMH
Sbjct: 4   SVGNGRMAVMTRLMAAGSFSRTIAGKSREEVGQQKFASEFICRELRDADEANLIDEEDMH 63

Query: 71  VFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRK 130
           VFGLKPMVDPLNLV CNICKKPVKASQYIIHSELCRSLG GQG IMDLD GMGHRKHSRK
Sbjct: 64  VFGLKPMVDPLNLVCCNICKKPVKASQYIIHSELCRSLGFGQGTIMDLDGGMGHRKHSRK 123

Query: 131 EKKKLLPADASI 139
           EKKKLL +DA+I
Sbjct: 124 EKKKLLSSDANI 135

[Close]

BLAST of Carg20143 vs. TrEMBL
Match: tr|A0A2P4JPK0|A0A2P4JPK0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_60393 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 13  GNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKP 72
           G+GRMAVM R+LAAGS+S+ +AEEVGH KLA+++ICRELR+ADEANL+DEEDMHVFGLKP
Sbjct: 75  GSGRMAVMARVLAAGSYSQNMAEEVGHLKLAAQYICRELREADEANLLDEEDMHVFGLKP 134

Query: 73  MVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLL 132
           M +PL+LV CN CKKPVKASQY  H+ELCRSL   + +I++L+   G+RK  RKE+KKLL
Sbjct: 135 MSEPLHLVCCNACKKPVKASQYAAHAELCRSLNCTEELILELNGSTGNRKPPRKERKKLL 194

Query: 133 PADAS 138
            A A+
Sbjct: 195 TAYAN 199

The following BLAST results are available for this feature:

BLAST of Carg20143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955384.1	1.8e-71	99.28	uncharacterized protein LOC111457430 isoform X1 [Cucurbita moschata]	[more]
XP_022955387.1	1.8e-71	99.28	uncharacterized protein LOC111457430 isoform X3 [Cucurbita moschata]	[more]
XP_022955388.1	1.8e-71	99.28	uncharacterized protein LOC111457430 isoform X4 [Cucurbita moschata]	[more]
XP_022979839.1	8.8e-71	97.83	uncharacterized protein LOC111479416 isoform X2 [Cucurbita maxima]	[more]
XP_022979843.1	2.0e-70	98.54	uncharacterized protein LOC111479416 isoform X5 [Cucurbita maxima]	[more]

BLAST of Carg20143 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg20143 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20143 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXZ3\|A0A1S3AXZ3_CUCME	1.8e-59	91.41	uncharacterized protein LOC103483792 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L549\|A0A0A0L549_CUCSA	7.4e-58	89.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151420 PE=4 SV=1	[more]
tr\|A0A1S3AWW9\|A0A1S3AWW9_CUCME	9.7e-58	88.64	uncharacterized protein LOC103483792 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3AX95\|A0A1S3AX95_CUCME	9.7e-58	88.64	uncharacterized protein LOC103483792 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4JPK0\|A0A2P4JPK0_QUESU	1.3e-41	68.00	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_60393 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20143-RA	Carg20143-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15117	ATAXIN 7 RELATED	coord: 12..136
None	No IPR available	PANTHER	PTHR15117:SF14	SUBFAMILY NOT NAMED	coord: 12..136

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20143	ClCG05G005770	Watermelon (Charleston Gray)	carwcgB0807
Carg20143	CmoCh14G016900	Cucurbita moschata (Rifu)	carcmoB1123

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20143	Wax gourd	carwgoB0970
Carg20143	Wax gourd	carwgoB0972
Carg20143	Silver-seed gourd	carcarB087
Carg20143	Silver-seed gourd	carcarB544
Carg20143	Cucumber (Gy14) v2	carcgybB0828
Carg20143	Cucumber (Gy14) v1	carcgyB0960
Carg20143	Cucurbita maxima (Rimu)	carcmaB1153
Carg20143	Cucurbita maxima (Rimu)	carcmaB1154
Carg20143	Cucurbita maxima (Rimu)	carcmaB1155
Carg20143	Cucurbita maxima (Rimu)	carcmaB1156
Carg20143	Cucurbita moschata (Rifu)	carcmoB1124
Carg20143	Cucurbita moschata (Rifu)	carcmoB1125
Carg20143	Cucurbita moschata (Rifu)	carcmoB1126
Carg20143	Cucurbita pepo (Zucchini)	carcpeB1163
Carg20143	Cucurbita pepo (Zucchini)	carcpeB1164
Carg20143	Cucurbita pepo (Zucchini)	carcpeB1165
Carg20143	Wild cucumber (PI 183967)	carcpiB0874
Carg20143	Cucumber (Chinese Long) v2	carcuB0854
Carg20143	Cucumber (Chinese Long) v3	carcucB0878
Carg20143	Bottle gourd (USVL1VR-Ls)	carlsiB761
Carg20143	Bottle gourd (USVL1VR-Ls)	carlsiB760
Carg20143	Melon (DHL92) v3.5.1	carmeB0827
Carg20143	Melon (DHL92) v3.5.1	carmeB0828
Carg20143	Melon (DHL92) v3.6.1	carmedB0839
Carg20143	Melon (DHL92) v3.6.1	carmedB0840
Carg20143	Watermelon (Charleston Gray)	carwcgB0808
Carg20143	Watermelon (97103) v1	carwmB0834
Carg20143	Watermelon (97103) v1	carwmB0835
Carg20143	Watermelon (97103) v2	carwmbB0867
Carg20143	Watermelon (97103) v2	carwmbB0868