Carg20105 (gene) Silver-seed gourd

Overview
NameCarg20105
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTOG array regulator of axonemal microtubules protein 1
LocationCucurbita_argyrosperma_scaffold_168 : 168621 .. 170602 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTCTCATCTCTGCAATTCTTCTCATTCTCGCTATGGCCATGGCTCTCAGATCCATTGATAATGTTCCGCTGGTTACGCCAAAAATGCCGAAGAAACAAACCAATGTGGCGGCGGATCCAATCCAGAAGCGAAACGATGAGAATCAGAATCCGGTTCCTCCTCCTGCAGACGCCGCCATTGATTATGTTTCTTCTGAGAATCTGAAGCCCTTGACGAACCCTAATTCTAATGTACTCGTCATTTTCCGTTTCTTTTTGCATTTCTTGCTTGTTTTCAGATCTGATCTTCGTTTTTGTTTCGTTGTTGTGTTAGGATTTCATTGAAGGATTGGATTCGAAAGATTGGGTGAAGGTCTGCGAATCGCTCAATAATGCTAGGCGTCTCGCGCTATTTCACACGGATCTCTTGCTGCCCTCGTTGTAAGTGGAATATTCTCTGTTTGTGGATTGGGATGGTGAAATTCTGGCGATTAATTTTTTTCCGATTGCATTACAGAGAGAAAATTATAGCGGTGCTGATTAAGTCGATGAAGAACCCTAGAAGTGCTTTAATCAAGACCTCAATCATGGCTTCTTCTGACATTTTTAACGCGTTTGGCGATCGTTTACTCGACGCATCCACGAGCAATGCATTTGATCAATTGGTGAGAGCTTGCAATTGAATTTCCTCGAACTATTTTCTTTTGTGATCAATATCTGAATAGGAAGTTCAATGATATCTGTTCCTAAACAATCAATTTTGCACTGGAAGATTAAACCCTAAACCCTAAACTACCAATTTTGTGGAAGATTTAAGCGTAATGTTGGATGAACAAGTTCTGATTGAGAGACTGATTATATGTGATTTTGGTTGCTCAGCTGCTTCAATTACTTCTCAAAGCTTCTCAAGACAAAAAGTTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGCAATCCACGACTCCTCTGCCTCTGCTGCAGAAACTTCGGCCATATGTTTCCCATTCCAACCACAGAGTCAGAGCCAAAGCGGCCATTCCAATCTCTGATTGTGTCTCTAAGATGGTAAAAACTGATGACAAATCACTTCTTTACTGCTTCTTTACTTCTGTTAGATCGATAGATCCCACGTCGATTGGAGAAGAGAACGAAACATTATTTATAAGAGTGTGGAAACTTCTCCCTAGCAACAGAGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGAAAAAACCCACATAGGACAATATCTTTCCGTGGTGGACTTGGATTGTTACAAATGGTATCAGTGCCAGATACCGGCCGGTGTGCCAGCGAAGACGCTGGACCCAAAAGAGGGTGGATTGTAAGATCTCACATTGGTTGGAGAGGAGAACGAAATATTCTTTATAAGGGTGTGGAAACCTCTCCCTCTCAGACGCGTTTTAAAAAAGCTTATATTTTAGTCCGAAAAAGAAAGCCTAAAGAGGACAATATCTGCTAGCCGGTAGGCTTAGGCTGTTACAAATTGTATCAGAGCCAGACACCAGGCGGTGTACAAGCGAGGGCGCTAGGCCCCAAAGAGGGGTGGATTGTGAGATCTCACATCAGTGGAAGAGGAGAATGAAACATTATTTATAAGGGTGGGAAGATCTCTTCCTAGCATACGCATTTTAAAAATCTTGAAAGAAAGTCCGAAAGCATACAATATCTACTAGCGGTGAGCTTGAACAGATGCATTCTAATATGGGTGGGTTGTGCGATTTTTTCTTCTGCAGGGTCTGGTAGAAATGAAGCAACATGGGATTGTTCCATTGCTTCAGATGGCCGCAGATTTGTTAAACGATAGGCTACCTGAGGCAAGGGAAGCAGCTCGGTGTATTGTGATGGGAATGTTCAAAGCATTGACAGAGAATGAAGAACAGAAACAGGAAGCTTGGCAAAGCTTGTGCCAAGCTAATCTGTCGCCCATTCATGCTCAGTCCCTGCTCAAAGTTGCTACCTCCTCTCAGTAG

mRNA sequence

CATTTCTCATCTCTGCAATTCTTCTCATTCTCGCTATGGCCATGGCTCTCAGATCCATTGATAATGTTCCGCTGGTTACGCCAAAAATGCCGAAGAAACAAACCAATGTGGCGGCGGATCCAATCCAGAAGCGAAACGATGAGAATCAGAATCCGGTTCCTCCTCCTGCAGACGCCGCCATTGATTATGTTTCTTCTGAGAATCTGAAGCCCTTGACGAACCCTAATTCTAATGATTTCATTGAAGGATTGGATTCGAAAGATTGGGTGAAGGTCTGCGAATCGCTCAATAATGCTAGGCGTCTCGCGCTATTTCACACGGATCTCTTGCTGCCCTCGTTAGAGAAAATTATAGCGGTGCTGATTAAGTCGATGAAGAACCCTAGAAGTGCTTTAATCAAGACCTCAATCATGGCTTCTTCTGACATTTTTAACGCGTTTGGCGATCGTTTACTCGACGCATCCACGAGCAATGCATTTGATCAATTGCTGCTTCAATTACTTCTCAAAGCTTCTCAAGACAAAAAGTTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGCAATCCACGACTCCTCTGCCTCTGCTGCAGAAACTTCGGCCATATGTTTCCCATTCCAACCACAGAGCAAGGGAAGCAGCTCGGTGTATTGTGATGGGAATGTTCAAAGCATTGACAGAGAATGAAGAACAGAAACAGGAAGCTTGGCAAAGCTTGTGCCAAGCTAATCTGTCGCCCATTCATGCTCAGTCCCTGCTCAAAGTTGCTACCTCCTCTCAGTAG

Coding sequence (CDS)

ATGGCCATGGCTCTCAGATCCATTGATAATGTTCCGCTGGTTACGCCAAAAATGCCGAAGAAACAAACCAATGTGGCGGCGGATCCAATCCAGAAGCGAAACGATGAGAATCAGAATCCGGTTCCTCCTCCTGCAGACGCCGCCATTGATTATGTTTCTTCTGAGAATCTGAAGCCCTTGACGAACCCTAATTCTAATGATTTCATTGAAGGATTGGATTCGAAAGATTGGGTGAAGGTCTGCGAATCGCTCAATAATGCTAGGCGTCTCGCGCTATTTCACACGGATCTCTTGCTGCCCTCGTTAGAGAAAATTATAGCGGTGCTGATTAAGTCGATGAAGAACCCTAGAAGTGCTTTAATCAAGACCTCAATCATGGCTTCTTCTGACATTTTTAACGCGTTTGGCGATCGTTTACTCGACGCATCCACGAGCAATGCATTTGATCAATTGCTGCTTCAATTACTTCTCAAAGCTTCTCAAGACAAAAAGTTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGCAATCCACGACTCCTCTGCCTCTGCTGCAGAAACTTCGGCCATATGTTTCCCATTCCAACCACAGAGCAAGGGAAGCAGCTCGGTGTATTGTGATGGGAATGTTCAAAGCATTGACAGAGAATGAAGAACAGAAACAGGAAGCTTGGCAAAGCTTGTGCCAAGCTAATCTGTCGCCCATTCATGCTCAGTCCCTGCTCAAAGTTGCTACCTCCTCTCAGTAG

Protein sequence

MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPLTNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQSTTPLPLLQKLRPYVSHSNHRAREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ
Homology
[Close]
BLAST of Carg20105 vs. NCBI nr
Match: XP_022955914.1 (uncharacterized protein LOC111457757 [Cucurbita moschata])

HSP 1 Score: 456.8 bits (1174), Expect = 4.6e-125
Identity = 248/294 (84.35%), Postives = 251/294 (85.37%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL
Sbjct: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFH+DLLLPSLEKIIAVLIKSMKNPRSAL
Sbjct: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHSDLLLPSLEKIIAVLIKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMASSDIFN+FGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASSDIFNSFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
           TTPLPLLQKLRPYVSHSNHR                                        
Sbjct: 181 TTPLPLLQKLRPYVSHSNHRVRAKAAIPISDCVSKMGLEEMKQHGIVPLLQMAADLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAARCIVMGMF+ALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ
Sbjct: 241 LPEAREAARCIVMGMFRALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 294

[Close]
BLAST of Carg20105 vs. NCBI nr
Match: XP_023528215.1 (uncharacterized protein LOC111791196 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 1.1e-123
Identity = 246/294 (83.67%), Postives = 249/294 (84.69%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL
Sbjct: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFH+DLLL SLEKIIAVLIKSMKNPRSAL
Sbjct: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHSDLLLSSLEKIIAVLIKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMASSDIFN+FGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASSDIFNSFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
           TTPLPLLQKLRPYVSHSNHR                                        
Sbjct: 181 TTPLPLLQKLRPYVSHSNHRVRAKAAIPISDCVSKMGLEEMKQHGIVPLLQMAADLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAARCIVMGMFKALT+NEEQKQEAWQS CQANLSPIHAQSLLKVATSSQ
Sbjct: 241 LPEAREAARCIVMGMFKALTQNEEQKQEAWQSFCQANLSPIHAQSLLKVATSSQ 294

[Close]
BLAST of Carg20105 vs. NCBI nr
Match: XP_022979892.1 (uncharacterized protein LOC111479447 [Cucurbita maxima])

HSP 1 Score: 442.6 bits (1137), Expect = 9.1e-121
Identity = 241/294 (81.97%), Postives = 246/294 (83.67%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALR IDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPP ADAAIDYVSSENLKPL
Sbjct: 1   MAMALRPIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPSADAAIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           TNP+SNDFIEGLDSKDWVKVCESLNN+RRLALFH+DLLLPSLEKI+AVLIKSMKNPRSAL
Sbjct: 61  TNPDSNDFIEGLDSKDWVKVCESLNNSRRLALFHSDLLLPSLEKILAVLIKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMASSDIFN+FGD LLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQ 
Sbjct: 121 IKTSIMASSDIFNSFGDLLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQF 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
           TTPLPLLQKLRPYVSHSNHR                                        
Sbjct: 181 TTPLPLLQKLRPYVSHSNHRVRAKAAIPISDCVSKMGPEEMKQYGIVPLLQMVADLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAARCIVMGMFKALTENEEQKQEAWQS CQANLSPIHAQSLLKVATSSQ
Sbjct: 241 LPEAREAARCIVMGMFKALTENEEQKQEAWQSFCQANLSPIHAQSLLKVATSSQ 294

[Close]
BLAST of Carg20105 vs. NCBI nr
Match: XP_008438886.1 (PREDICTED: uncharacterized protein LOC103483845 [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 215/294 (73.13%), Postives = 228/294 (77.55%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALR IDN   VTP+ PKKQ  V   PIQK NDENQ P+PP ADA IDYVSSENLKPL
Sbjct: 1   MAMALRPIDNALPVTPERPKKQAKVVV-PIQKGNDENQAPLPPSADATIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           T+P+SN+FIEGLDSKDWVKVCE+LNNARRLA+FH+DLLLPSLEK++ VL+KSMKNPRSAL
Sbjct: 61  TDPDSNNFIEGLDSKDWVKVCETLNNARRLAIFHSDLLLPSLEKVMVVLMKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMAS+DIFNAFGDRLLD STSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASADIFNAFGDRLLDTSTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
            TPLPLLQKLRPYVSHSN R                                        
Sbjct: 181 MTPLPLLQKLRPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGFVPLLQMASDLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAAR IVMGMFKA TENEE KQEAWQS CQANLSPIH+QSLLKV TSSQ
Sbjct: 241 LPEAREAARSIVMGMFKAYTENEEDKQEAWQSFCQANLSPIHSQSLLKVVTSSQ 293

[Close]
BLAST of Carg20105 vs. NCBI nr
Match: XP_011651061.1 (PREDICTED: uncharacterized protein LOC101204184 [Cucumis sativus] >KGN57110.1 hypothetical protein Csa_3G154330 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 7.7e-104
Identity = 214/294 (72.79%), Postives = 228/294 (77.55%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALR IDN   VTP+ PKKQ  V   P+QK NDENQ P+PP ADA IDYVSSENLKPL
Sbjct: 1   MAMALRPIDNALPVTPERPKKQAKVVV-PVQKGNDENQAPLPPSADATIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           T+P+SN+FIEGLDSKDWVKVCE+LNNARRLA+FH+DLLLPSLEK++ VL+KSMKNPRSAL
Sbjct: 61  TDPDSNNFIEGLDSKDWVKVCETLNNARRLAIFHSDLLLPSLEKVMVVLMKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMAS+DIFNAFGDRLLD STSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASADIFNAFGDRLLDTSTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
            TPLPLLQKLRPYVSHSN R                                        
Sbjct: 181 MTPLPLLQKLRPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGFVPLLQMASDLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAAR IVMGMFKA TENEE KQEAWQS CQANLSPIH+QSLLKV TSSQ
Sbjct: 241 LPEAREAARSIVMGMFKAYTENEEDKQEAWQSFCQANLSPIHSQSLLKVVTSSQ 293

[Close]
BLAST of Carg20105 vs. TAIR10
Match: AT4G15830.1 (ARM repeat superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-60
Identity = 136/297 (45.79%), Postives = 184/297 (61.95%), Query Frame = 0 

Query: 3   MALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPLTN 62
           MALR+I+N   ++ + PKK   ++  P    NDEN NPV   A++ ++YV+SENLKP ++
Sbjct: 1   MALRNIENALPISQERPKKLAKLSKQPEIGLNDEN-NPV-AVAESTVEYVASENLKPFSD 60

Query: 63  PNSN--DFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 122
           P S+    +E L SKDW+KVC+SLNN RR A+ H+ LLLP LEK+I V++K+MKNPRSAL
Sbjct: 61  PESSVQRLLEELASKDWIKVCDSLNNTRRFAIHHSSLLLPILEKLIVVMVKAMKNPRSAL 120

Query: 123 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 182
            KTSIM  SDIF A+G++LL+     + D LLLQLL+KASQDKKFVCEEA+KAL  +V S
Sbjct: 121 CKTSIMTCSDIFTAYGEKLLEGPHLKSMDDLLLQLLMKASQDKKFVCEEAEKALNTMVNS 180

Query: 183 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 242
              LPLL+KL+ YV HSN R                                        
Sbjct: 181 VARLPLLRKLQSYVRHSNPRVRAKAAVSTSNCVSKMEVNEMEEFGMILLAQMAADQLSDK 240

Query: 243 ---AREAARCIVMGMFKALTENEEQ-----KQEAWQSLCQANLSPIHAQSLLKVATS 250
              AREAAR +V  +F+  T NEE+     KQEAW+  C+ N++ ++AQ+++K+  S
Sbjct: 241 LPEAREAARSMVNSLFEKFTWNEEEDEEGSKQEAWKKFCEKNVTGLNAQAMIKIVAS 295

[Close]
BLAST of Carg20105 vs. TAIR10
Match: AT3G01450.1 (ARM repeat superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-37
Identity = 99/277 (35.74%), Postives = 148/277 (53.43%), Query Frame = 0 

Query: 22  QTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPLTNPNS--NDFIEGLDSKDWVK 81
           Q +V  D    + DE + P        I+Y+ S++L  +T  ++     +  LDSKDWV 
Sbjct: 40  QNSVPFDHNHPKGDEIEKPEAERVIVEIEYIESKDLNNVTQVDAVLKSLVTELDSKDWVL 99

Query: 82  VCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSALIKTSIMASSDIFNAFGDRL 141
           VC++LN  RRL++FH + +L  LEK+I  ++KS+KNPRSA+ KT+ M S+DIF+++ D  
Sbjct: 100 VCDALNTIRRLSIFHKEEMLHMLEKVILFIVKSLKNPRSAVSKTACMTSADIFSSYNDHT 159

Query: 142 LDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQSTTPLPLLQKLRPYVSHSNH 201
           +D       D LL QLLLK+SQDK+FVCE A+KAL A+    +P  LL KL+P++ + N 
Sbjct: 160 ID-----QLDLLLTQLLLKSSQDKRFVCEAAEKALVAMTAHVSPALLLPKLQPFLKNRNP 219

Query: 202 R-------------------------------------------AREAARCIVMGMFKAL 247
           R                                           +REAAR +++ +    
Sbjct: 220 RIRAKASTCFSRCVPRLGIEGIREYGIEKLVQAASSQLSDQLPESREAARAVLLELQTVY 279

[Close]
BLAST of Carg20105 vs. TAIR10
Match: AT5G14790.1 (ARM repeat superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 75/172 (43.60%), Postives = 116/172 (67.44%), Query Frame = 0 

Query: 36  ENQNPVPPPADAAIDYVSSENLKPLTNPNS--NDFIEGLDSKDWVKVCESLNNARRLALF 95
           E + P P  A   ++Y+ SENL  + + ++     + GL+SKDW+ +C++LNN RRL++F
Sbjct: 57  EAEKPEPEIAIVEVEYIESENLDNVDDADAVLKSVLAGLESKDWISLCDALNNVRRLSIF 116

Query: 96  HTDLLLPSLEKIIAVLIKSMKNPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLL 155
           H + ++  LEK+I +++KS+KNPRSA+ KT+ M S+DIF+A+ + + D       + LL 
Sbjct: 117 HKEEMMHMLEKVIPLVVKSLKNPRSAVCKTACMTSADIFSAYNNHITD-----LLEPLLT 176

Query: 156 QLLLKASQDKKFVCEEADKALKALVQSTTPLPLLQKLRPYVSHSNHRAREAA 206
           QLLLK+SQDK+FVCE A+KAL A+ +  +P  LL KL+P + + N R R  A
Sbjct: 177 QLLLKSSQDKRFVCEAAEKALTAMTKYVSPTLLLPKLQPCLKNRNPRIRAKA 223

[Close]
BLAST of Carg20105 vs. TAIR10
Match: AT3G18530.1 (ARM repeat superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.4e-19
Identity = 72/223 (32.29%), Postives = 112/223 (50.22%), Query Frame = 0 

Query: 22  QTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPLTNPNSNDFIEGLDSKDWVKV- 81
           Q +V  D      DE + P        ++Y+ S++L  +   ++   +  + S  +  + 
Sbjct: 40  QNSVPLDHNHPTGDEIEKPEAERVIVELEYIKSKDLNNVAEVDAVLKVSIVLSWYYTMLY 99

Query: 82  CESLNNARRLALFH-TDLLLPSLEKIIAVLIKSMKNPRSALIKTSIMASSDIFNAFGDRL 141
           C+   +  R + FH       +  K+I  ++KS+KNPRSA+ KT+ M S DIF+++ D +
Sbjct: 100 CDFSFSLDRSSSFHFPQGRNAAFAKVILFVVKSLKNPRSAVSKTACMTSEDIFSSYNDHI 159

Query: 142 LDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQSTTPLPLLQKLRPYVSHSNH 201
            D       D+LL QLLLK+SQDK+FVCE A++AL A+    +P  LL KLRP + + + 
Sbjct: 160 FD-----QLDRLLTQLLLKSSQDKRFVCEAAERALVAMTTHVSPALLLPKLRPCLKNKSP 219

Query: 202 RAREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQS 243
           R R  A     G    L    E  +E        NL  +H QS
Sbjct: 220 RIRAKASACFSGCVPRL--GIEGMREYGIETNSQNLRRLHGQS 255

[Close]
BLAST of Carg20105 vs. Swiss-Prot
Match: sp|Q6A070|TGRM1_MOUSE (TOG array regulator of axonemal microtubules protein 1 OS=Mus musculus OX=10090 GN=Togaram1 PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 5.2e-11
Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 0 

Query: 50   DYVSSENLKPLTNPN--SNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIA 109
            + + S  L+P + P+    + +  L  +DW K  E LN  R LA FH+DLL   L +   
Sbjct: 1245 EIMDSLELRPFSKPDIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETTF 1304

Query: 110  VLIKSMKNPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVC 169
             +++ +KN RS + + +++   D+F       L  S     D  +  LL KA +   F+ 
Sbjct: 1305 AVVQEVKNLRSGVSRAAVVCLGDLFT-----YLKKSMDQELDSAVRALLHKAGESNTFIR 1364

Query: 170  EEADKALKALVQSTTP 184
            E+ DKALKA+V + TP
Sbjct: 1365 EDVDKALKAMVNNVTP 1375

[Close]
BLAST of Carg20105 vs. Swiss-Prot
Match: sp|Q9Y4F4|TGRM1_HUMAN (TOG array regulator of axonemal microtubules protein 1 OS=Homo sapiens OX=9606 GN=TOGARAM1 PE=1 SV=4)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 42/143 (29.37%), Postives = 71/143 (49.65%), Query Frame = 0 

Query: 43   PPADAAIDYVSSENLKPLTNPN--SNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLP 102
            P    + + +    L+P + P     + +  L  +DW K  E LN  R LA FH+++L  
Sbjct: 1235 PSVTHSPEIMDLSELRPFSKPEIALTEALRLLADEDWEKKIEGLNFIRCLAAFHSEILNT 1294

Query: 103  SLEKIIAVLIKSMKNPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKAS 162
             L +    +++ +KN RS + + +++  SD+F       L  S     D  +  LL KA 
Sbjct: 1295 KLHETNFAVVQEVKNLRSGVSRAAVVCLSDLFT-----YLKKSMDQELDTTVKVLLHKAG 1354

Query: 163  QDKKFVCEEADKALKALVQSTTP 184
            +   F+ E+ DKAL+A+V + TP
Sbjct: 1355 ESNTFIREDVDKALRAMVNNVTP 1372

[Close]
BLAST of Carg20105 vs. TrEMBL
Match: tr|A0A1S3AX30|A0A1S3AX30_CUCME (uncharacterized protein LOC103483845 OS=Cucumis melo OX=3656 GN=LOC103483845 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.9e-104
Identity = 215/294 (73.13%), Postives = 228/294 (77.55%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALR IDN   VTP+ PKKQ  V   PIQK NDENQ P+PP ADA IDYVSSENLKPL
Sbjct: 1   MAMALRPIDNALPVTPERPKKQAKVVV-PIQKGNDENQAPLPPSADATIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           T+P+SN+FIEGLDSKDWVKVCE+LNNARRLA+FH+DLLLPSLEK++ VL+KSMKNPRSAL
Sbjct: 61  TDPDSNNFIEGLDSKDWVKVCETLNNARRLAIFHSDLLLPSLEKVMVVLMKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMAS+DIFNAFGDRLLD STSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASADIFNAFGDRLLDTSTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
            TPLPLLQKLRPYVSHSN R                                        
Sbjct: 181 MTPLPLLQKLRPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGFVPLLQMASDLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAAR IVMGMFKA TENEE KQEAWQS CQANLSPIH+QSLLKV TSSQ
Sbjct: 241 LPEAREAARSIVMGMFKAYTENEEDKQEAWQSFCQANLSPIHSQSLLKVVTSSQ 293

[Close]
BLAST of Carg20105 vs. TrEMBL
Match: tr|A0A0A0L588|A0A0A0L588_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154330 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.1e-104
Identity = 214/294 (72.79%), Postives = 228/294 (77.55%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKRNDENQNPVPPPADAAIDYVSSENLKPL 60
           MAMALR IDN   VTP+ PKKQ  V   P+QK NDENQ P+PP ADA IDYVSSENLKPL
Sbjct: 1   MAMALRPIDNALPVTPERPKKQAKVVV-PVQKGNDENQAPLPPSADATIDYVSSENLKPL 60

Query: 61  TNPNSNDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMKNPRSAL 120
           T+P+SN+FIEGLDSKDWVKVCE+LNNARRLA+FH+DLLLPSLEK++ VL+KSMKNPRSAL
Sbjct: 61  TDPDSNNFIEGLDSKDWVKVCETLNNARRLAIFHSDLLLPSLEKVMVVLMKSMKNPRSAL 120

Query: 121 IKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180
           IKTSIMAS+DIFNAFGDRLLD STSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS
Sbjct: 121 IKTSIMASADIFNAFGDRLLDTSTSNAFDQLLLQLLLKASQDKKFVCEEADKALKALVQS 180

Query: 181 TTPLPLLQKLRPYVSHSNHR---------------------------------------- 240
            TPLPLLQKLRPYVSHSN R                                        
Sbjct: 181 MTPLPLLQKLRPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGFVPLLQMASDLLNDR 240

Query: 241 ---AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
              AREAAR IVMGMFKA TENEE KQEAWQS CQANLSPIH+QSLLKV TSSQ
Sbjct: 241 LPEAREAARSIVMGMFKAYTENEEDKQEAWQSFCQANLSPIHSQSLLKVVTSSQ 293

[Close]
BLAST of Carg20105 vs. TrEMBL
Match: tr|A0A1R3JUE2|A0A1R3JUE2_9ROSI (Armadillo-like helical OS=Corchorus olitorius OX=93759 GN=COLO4_13865 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 169/300 (56.33%), Postives = 207/300 (69.00%), Query Frame = 0 

Query: 3   MALRSIDNVPLVTPKMPKKQTNVAADPIQKR------NDENQNPVPPPADAAIDYVSSEN 62
           MALR IDN    TP+ PKKQ  V+  PIQK+       DEN+ P+PP ADA++DY+ SEN
Sbjct: 1   MALRPIDNALPTTPERPKKQAKVSV-PIQKKASEIGVTDENKAPLPPSADASVDYIPSEN 60

Query: 63  LKPLTNPNSN--DFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMK 122
           LKP+ +P SN    +EGLDSKDWVK+CESLN+ARR +L+H+ LLLP LEK++ VL+K+MK
Sbjct: 61  LKPIQDPESNIQSLVEGLDSKDWVKLCESLNDARRFSLYHSALLLPILEKVMLVLVKAMK 120

Query: 123 NPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKAL 182
           NPRSAL KTSIMA+SDIFN FG++LLD++ S AFDQLLLQLLLKASQDKKFVCEEADK+L
Sbjct: 121 NPRSALCKTSIMAASDIFNGFGEKLLDSTDSGAFDQLLLQLLLKASQDKKFVCEEADKSL 180

Query: 183 KALVQSTTPLPLLQKLRPYVSHSNHR---------------------------------- 242
            A+V+S  PLPLLQKLR YV+HSN R                                  
Sbjct: 181 NAMVKSIAPLPLLQKLRGYVNHSNLRVRAKAAVFISNSVSKMGREEIKEFGMVTLLQMAV 240

Query: 243 ---------AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATSSQ 252
                    AREAAR IV+ +F+A  E+EE ++EAWQS CQ NL PIHAQS++KV   S+
Sbjct: 241 DLLNDRLPEAREAARSIVLSVFEAFKEDEENEEEAWQSFCQTNLPPIHAQSMVKVVFPSK 299

[Close]
BLAST of Carg20105 vs. TrEMBL
Match: tr|A0A2P6QYB8|A0A2P6QYB8_ROSCH (Putative TOG domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0422361 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.8e-77
Identity = 173/302 (57.28%), Postives = 212/302 (70.20%), Query Frame = 0 

Query: 1   MAMALRSIDNVPLVTPKMPKKQTNVAADPIQKR-----NDENQNPVP-PPADAAIDYVSS 60
           MAMALR IDN   VTP+ PKK T VA  PIQ +     NDEN+ P+P   ++A IDY+SS
Sbjct: 1   MAMALRPIDNALPVTPERPKKPTKVAL-PIQTQSDLGVNDENKAPLPAATSEATIDYISS 60

Query: 61  ENLKPLTNPNS--NDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKS 120
           ENLKP+++P+S     IEGLDSKDW KVCESLNNARR ALFH+ LL+P+LEK++ VL+KS
Sbjct: 61  ENLKPISDPDSKIQSLIEGLDSKDWTKVCESLNNARRFALFHSALLVPTLEKVMVVLVKS 120

Query: 121 MKNPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADK 180
           MKNPRSALIKTSIMAS+D FNAFGD LLD++TS+AFDQLLLQLLLKASQDK+FVCEEADK
Sbjct: 121 MKNPRSALIKTSIMASADFFNAFGDSLLDSTTSDAFDQLLLQLLLKASQDKRFVCEEADK 180

Query: 181 ALKALVQSTTPLPLLQKLRPYVSHSNHR-------------------------------- 240
           AL A+V+S TPLPLL +L+ YV+H++ +                                
Sbjct: 181 ALSAMVKSLTPLPLLHRLKAYVTHAHLKVRAKAAISISTCVSKMGLEGMKDYGLVALVKM 240

Query: 241 -----------AREAARCIVMGMFKALTENEEQKQEAWQSLCQANLSPIHAQSLLKVATS 252
                      AREAAR IV  ++ A TENEE+KQE W S C++NL+PIHA +++K  TS
Sbjct: 241 AADSLNDRLPEAREAARSIVTSVYNAYTENEEEKQEIWLSFCESNLTPIHAHAMVKF-TS 300

[Close]
BLAST of Carg20105 vs. TrEMBL
Match: tr|A0A061ENA2|A0A061ENA2_THECC (ARM repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_021211 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.1e-77
Identity = 168/301 (55.81%), Postives = 207/301 (68.77%), Query Frame = 0 

Query: 3   MALRSIDNVPLVTPKMPKKQTNVAADPIQKR------NDENQNPVPPPADAAIDYVSSEN 62
           MALR IDN   +TP+ PKKQ  V+  P+QK+      NDEN+ P+PP ADA++DY+ SEN
Sbjct: 1   MALRPIDNALPITPERPKKQAKVSV-PVQKKPSEFGVNDENKAPLPPSADASVDYIPSEN 60

Query: 63  LKPLTNPNS--NDFIEGLDSKDWVKVCESLNNARRLALFHTDLLLPSLEKIIAVLIKSMK 122
           LKP  +P S     IEGLDSKDWV +CESLN++RR +L+H+ LLLP LEK+I V++K+MK
Sbjct: 61  LKPFQDPESIIQSLIEGLDSKDWVNLCESLNDSRRFSLYHSTLLLPILEKVILVVVKAMK 120

Query: 123 NPRSALIKTSIMASSDIFNAFGDRLLDASTSNAFDQLLLQLLLKASQDKKFVCEEADKAL 182
           NPRSAL KTSIMA+SDIFNAFG++LLD++ S AFDQLLLQLLLKASQDKKFVCEEAD++L
Sbjct: 121 NPRSALCKTSIMAASDIFNAFGEKLLDSTDSGAFDQLLLQLLLKASQDKKFVCEEADRSL 180

Query: 183 KALVQSTTPLPLLQKLRPYVSHSNHR---------------------------------- 242
            A+V+S  PLPLLQKLR YV+H N R                                  
Sbjct: 181 NAMVKSMAPLPLLQKLRGYVNHGNLRVRAKASVSISNSVLKMGLEEIKEFGMVTLLQMAA 240

Query: 243 ---------AREAARCIVMGMFKALTENEEQ-KQEAWQSLCQANLSPIHAQSLLKVATSS 252
                    AREAAR IV  ++KA TENEE+ ++EAWQS CQ NL P HAQS++KV  SS
Sbjct: 241 DLLNDRLPEAREAARSIVFSVYKAFTENEEEMEEEAWQSFCQTNLPPNHAQSMVKVILSS 300

The following BLAST results are available for this feature:
BLAST of Carg20105 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955914.14.6e-12584.35uncharacterized protein LOC111457757 [Cucurbita moschata][more]
XP_023528215.11.1e-12383.67uncharacterized protein LOC111791196 [Cucurbita pepo subsp. pepo][more]
XP_022979892.19.1e-12181.97uncharacterized protein LOC111479447 [Cucurbita maxima][more]
XP_008438886.15.9e-10473.13PREDICTED: uncharacterized protein LOC103483845 [Cucumis melo][more]
XP_011651061.17.7e-10472.79PREDICTED: uncharacterized protein LOC101204184 [Cucumis sativus] >KGN57110.1 hy... [more]
BLAST of Carg20105 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15830.11.7e-6045.79ARM repeat superfamily protein[more]
AT3G01450.12.0e-3735.74ARM repeat superfamily protein[more]
AT5G14790.12.1e-3443.60ARM repeat superfamily protein[more]
AT3G18530.15.4e-1932.29ARM repeat superfamily protein[more]
BLAST of Carg20105 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6A070|TGRM1_MOUSE5.2e-1132.35TOG array regulator of axonemal microtubules protein 1 OS=Mus musculus OX=10090 ... [more]
sp|Q9Y4F4|TGRM1_HUMAN2.2e-0929.37TOG array regulator of axonemal microtubules protein 1 OS=Homo sapiens OX=9606 G... [more]
BLAST of Carg20105 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AX30|A0A1S3AX30_CUCME3.9e-10473.13uncharacterized protein LOC103483845 OS=Cucumis melo OX=3656 GN=LOC103483845 PE=... [more]
tr|A0A0A0L588|A0A0A0L588_CUCSA5.1e-10472.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154330 PE=4 SV=1[more]
tr|A0A1R3JUE2|A0A1R3JUE2_9ROSI2.2e-7856.33Armadillo-like helical OS=Corchorus olitorius OX=93759 GN=COLO4_13865 PE=4 SV=1[more]
tr|A0A2P6QYB8|A0A2P6QYB8_ROSCH1.8e-7757.28Putative TOG domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch... [more]
tr|A0A061ENA2|A0A061ENA2_THECC4.1e-7755.81ARM repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_021211 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20105-RACarg20105-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 48..243
e-value: 3.8E-22
score: 81.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..45
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 31..208
NoneNo IPR availablePANTHERPTHR21567:SF61SUBFAMILY NOT NAMEDcoord: 31..208
IPR016024Armadillo-type foldSUPERFAMILYSSF48371ARM repeatcoord: 62..229