Carg20004 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20004
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chlorophyll synthase
Location	Cucurbita_argyrosperma_scaffold_167 : 399625 .. 405368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTTAGAGTTTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTTCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAATTCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGTGAGTTCACTCTGTAATGCCTCAACAGTTTCTGAAAACAACAAAAATGAATACACATTGATATCCAAGAGCTTTGAAATCGAAGAATGAAACTCTACGTTACGTGCATGACTGTTTCGAGTTTCTTGTTATTCTTCACGGACTTCTCTGGCTTCAATGTGGATTTTGAGATATCATGTGCTAATTCTTTTTATATTAGTAACGACGGATTGTTCATTTTTCCAGGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTCTTTCATGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTTTTGCTTCCTTTTTAATGTTGACCAGGGGAATACTCTGAATCTTGCAGTGTAGATTTCTCAAAACTTTAGAAACGATTAAATTTGAGCTGCTTTATTATTTTTTTTTTCTTTTCATGATTTGCTGCTTATTTATATTCTGATTATTCGCTTTGATCAGTTAAATCTCAGGCACCAGATAAAGCGCCGGCAAGTGGTGGTTCGAGCTTCAACCAGCTTCTTGGAATTAAAGGTGCTGCGCTCGAAACTGTGAGTTACCATGTCCTAAGCTTGTTTTTTAGGAAGATTTGAATGTACACATCACAGTAAGTCGTTAATAAGTTCTTCATGTCATTTTATGCAGAATAAATGGAAGATTCGTCTTCAATTGACAAAGCCTGTTACATGGCCGCCCTTGGTTTGGGGAGTAGTGTGTGGAGCTGCTGCTTCTGGTACTCAAATTCTACATAATAAGACATTAAAATTGAATTTGAAAAGTTTTTGATGAATCACTAACACATATTACCGTCAACTTATGTCTTAGTCGTCTGATGATGAGAGTGAGTTCTTATCTGATAAGAACTTTAAGATCTACTCTCATGTTGTGTATTATATGGTCTAATGCATCAATGGTAGTCAAAGGAGTGATTACACGTACAGATAAATTAGGGATAGGACTAAATGACCTTTTTTCTGCTTCATTGATTAGTTACCTCACTGAATCATTGAATATGCCTTCAATGATACATGCTTTTTTTCACAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGGTAAACTCTTTTTAATGTAAAGCTTTCCTATGACTTATGAAAGTATTATTCGTGCACAAATAAAATAGAACTGGTACTTTGGTTTTTTTAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCCTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTATGAGCTAAACCATTTGATATGCATTAGCAAAGGCATATTATCCTTCCTTAATGGTTTCTTCATTCCATAAATTTTATCAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGTAGGTTCATTGAATTGATAGAACATACTCATCTTTCATATGTATTGTTTTTCCTGAATTTCGTTCTTATCCTTCTTAGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGGTAAGTCAAAGGTTTTTGTTTCTAAAATTGGATATTCTGAATGATAAGAGCATTTATTTTGTGGTTGCAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGCGAAATCCTGTGATCTTTAGTAATTGGTAAATTGATATACATTGGTAGTGAATAAAAATGTCACCGAAATTACTGCAATTGACAGGTCGACAAAGTCAATTGCATTTCATATGAAAATTTGAAAGCTTTCTTCGTATCTCTGGTCAGTGATTAATATTCACACTCATTTGAATGGCCTTGGACTTTTGAGCATATTGTTATCCTATGGGCAAAAGCTGATCAAAGGAGAACACCCTTTCTCTATTGACCATGAAATCTAATGTTATGATTACACTTATCCACACAAATTTAGATAAACGAATACTTTATAAACTTCTAATGCACTTCGAGTGAACCACATGTGTTGAGCTTGAATCATATACATGGAACGTCCAATCGATGGCTAGTTTGCAGTTATCTTCAATTTATTGTTTATATAAAGTGAATTGGATTGTTCCAGGCTCTACATTAATCATATGTATTACAAAATTTTCTCTGTTCTTTATAATATGATAAGTTTTCCCTTTCCAGTAACAGATAATTTTTAATCTCAGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGAGTACGCTCAATTTATTTTTTGAGTTCCTACTTTCACAAAATCCAATACTAATGCGACTGCCTTCTGCTTTGCCTTAACCAGTTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGGTATTTCATTCTAAAACAGTCTTTGATTTGTTAAACTAAATTTTGGTCTTATCAGACTCTTTTTGTTTTGTTATTCTATTGTCAGCTCTTATTGTTTACTGCTCTTACAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTAATTCTTTTAGCACTGTTTTGTTCAAGGGGTCTTCACTTTAAATCCATGCGCAAAATTAAGGTCACCAGACCATTGAAAAATAAGAACATAAGTTGATCATTTCTTGGCTTCTGCCTTTCTTCTAATTTACATTTTGGAGGGTCTTCACCTTGTTTGGGTTTCATCTTTTCGTACATGCACCCTTCTATTGAATTTTGTAACAATTATGCTCTTCTATAATATCGAATCACCTCCAATGTGCCTACATCTATTAAGCTTTGTTAGCCACCGAAGGAATTGAGCAATGTTGAAAGTACTGCAGATGATATATCTCAGATTCTCAACGTAACAATTAACTGAGAGAAGGATAAGAATCCCAAAAGTTTGTTTGCAACAAGCGAATATTTAATATTCTGCATTCTGATTGTTGGAAAGATAGATTGCTTGATCTCTCTTTGCCTTCTCTACCAAAATAATATTCCTGAATGCCAAGGTCTGAAAGATGGTGTTCTTTGCTGCTATGAACTGCATTCTTGAAGGAAACGGTTAGGAATCACGGATCTATGATATTGTCCACTTTGAGCATAAGCCGATATTGTCCACTTTGAGCATAAGCCAAGGTGGGACTCCCTAAATAAGTCATTCTTAAAAACCCATGATTATTCCCTAAATTAGCCGAGGTGGACTCCCTCCCAACAATTCTCAACCAAAACCATGTATGGGTCTCTGATACTGAAGGCTTAAAAGCTATCATCCTGCCATGCGTATAAAATGAAAATTGCTATTTATTTGCGATGTAGATCCAGAAATCATAAGGACTAGAATCGGGACTTTGATCTGCAAGCTAATTACACTGTTCCCTCTACCACATTTGAAATGAACGTGACCACAAATACTATTACTTATTGCAGGTTATCTGTGGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGGTATATATACTTTTAAATAAACATCAAATGGTGTCAGTTTTCTCTTAAGTAGGCAGCCGCTGCTGAACAACTGTATAGTAATGTATGGGGGTATTATTTGGTATTCAAGTATTGAGGTGTAAATTGTGATCCCATCTCTTTCTATTTTCTTTAATTATAATTGAATAGTCGTGTTTGATTCGACAATCAGCCTTCTAGCTGAACTTTCCTTTTAGTTGCAACGAACATTAATACTCGACTAATGCATACTATTATGGTTTTTGCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGTACGTAAATTCTTCTTTAAAGTGTAGACTTGCGTTCATAGAAACTGCTATACAGAGCCGTTTCTCTCTGTGCTATTTGATAAAGCATTATCGTCCTGCCCTTTCCAACAACTTTAAGTGGTCCGAACCCCATGACGTCCATAATCGTGTACCTACCTGCCACTACCACGCCGGATTTGTCAGCTTCTTTATATTTCTTTTTACAGATTTTGGTGGGTTGAGTTGAGATATTTTTATATCGGGTTACAAAAAAAATTTCAATCAAAACACTTCATATTACAACTCAATGACTCGATCATAAATAGTTTATTCAAAATTTTATTTTATTTAAAATTTATAAATATATATTTTTAAAAATTACCTTAAATAGTTCTAGAATAAATGATCAAAAAAATAATTATGTTATTAAATATATATATATATTTTTTAAATGAATAATTATTGATAAATTTGAATGGGTTTATTTTAGTATAACTCATAAACTACCCAACAAACCTGTTCGATGATAAAAGTCTCACTAATTTACGGAATACGGAATGATCACGAGTTTATAAACAAATAATATTCTCTCTATTGGTTTGAGGTCTTTTAGGGAAGCCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAAGTCGTGTTCATCTAATATAGTATCAGAGCGATACCTTAAACTTAGTCTTGCCAATAGATTGATAAATCCTCAAATGTCGAACAAAGGACTCCAAAAAGAAAAAGGAATCGAGCCTCTTCGAAAGTACGAAGGCAGTAAAAAATGACTAAGACTCCAAAAGAGTCGAGTCTCGATTAAGGGGAAGCGTGCTTTGTTCGAGGGGAGGTGTTGGATGATAAAAGTCCCACGTCGGCTAATTTAGGGAATGATCGTGGGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAACACGCTCAAAGTGGACAATATCATACCATTGTGGAGAGCCGTGTTCGTCTTAACGCACCCAACCCATGATTGAATTGATTGAGTTCCTGGAGTCGAGTTGTTTTTCTCTCTTTTTTACCTTACGTTTGCATTAACATTTCAGGCCAGTGCCCAGCCATTTCTTGTGCTGGGGCTGTTGGTCACTGCTCTTGCTACCAGACATTAAACTCTAGCATGCGGAAAATTAAACGTACGTATGTGTACAGACATGCGTGACAAACGCAATGCCAGCAAGAGCAGACAGCAAAGTCTGCGGACGCCCCCAGCAGCAGCCAGCCCAAGTCAGGTTACACTCGCCTGGTTTGGTAAATCAGTTTTGGATCTCTACCAGCATATTTCAAAGCTTTGATTTAGGGTTGTATCACAATAAGTTCTTATTTAAAGATTAAAGTAGGAACGACATTTCATCAGTTCTTCAAAGCTTTCATCAGATTTAGTTTGTATTACACGTCAATTTTCTCGGTTTCTAATGAGATACGTCCCCTTACTTCAGGTTGCAATTGAATCAGAATATGCATACATACTGGAATTCTGTTCTCTTGCTTCCGACTGCTCGTATATTTTTCAGGTCTGCCAACCAACTATGCTGGCTTAA

mRNA sequence

GATCTTAGAGTTTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTTCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAATTCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGTGAGTTCACTCTTAACGACGGATTGTTCATTTTTCCAGGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCCTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGATTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTTATCTGTGGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGTTGCAATTGAATCAGAATATGCATACATACTGGAATTCTGTTCTCTTGCTTCCGACTGCTCGTATATTTTTCAGGTCTGCCAACCAACTATGCTGGCTTAA

Coding sequence (CDS)

GATCTTAGAGTTTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTTCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAATTCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGTGAGTTCACTCTTAACGACGGATTGTTCATTTTTCCAGGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCCTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGATTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTTATCTGTGGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGTTGCAATTGAATCAGAATATGCATACATACTGGAATTCTGTTCTCTTGCTTCCGACTGCTCGTATATTTTTCAGGTCTGCCAACCAACTATGCTGGCTTAA

Protein sequence

DLRVLVGVPRSTGDSASMALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETDKNEGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQVAIESEYAYILEFCSLASDCSYIFQVCQPTMLA

Homology

[Close]

BLAST of Carg20004 vs. NCBI nr
Match: XP_022949992.1 (chlorophyll synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 557.4 bits (1435), Expect = 3.6e-155
Identity = 293/370 (79.19%), Postives = 295/370 (79.73%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFS              RRLSVIAAETD
Sbjct: 1   MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSR-------------RRLSVIAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
           KNE                                                         
Sbjct: 61  KNEVKSQAPDKAPASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC
Sbjct: 181 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 357

[Close]

BLAST of Carg20004 vs. NCBI nr
Match: XP_023543339.1 (chlorophyll synthase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.7 bits (1410), Expect = 2.8e-152
Identity = 290/370 (78.38%), Postives = 292/370 (78.92%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNTA FVRSSSIQANRVR QYALSPVSVSFS              RRLSVIAAETD
Sbjct: 1   MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSR-------------RRLSVIAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
           KNE                                                         
Sbjct: 61  KNEVKSQAPDKAPASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC
Sbjct: 181 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLSVAGYL GAGKPYYALALLALIAPQVFFQFKYFLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 357

[Close]

BLAST of Carg20004 vs. NCBI nr
Match: XP_022978209.1 (chlorophyll synthase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 289/370 (78.11%), Postives = 291/370 (78.65%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNTA FVRSSSIQANRVRIQYALSPVSVSFS              RRL VIAAETD
Sbjct: 1   MALTLNTAPFVRSSSIQANRVRIQYALSPVSVSFSR-------------RRLLVIAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
           KNE                                                         
Sbjct: 61  KNEVKSQAPDKAPASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           VMAQIWVLLLGGLGLAGLLDVWAGHD PIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC
Sbjct: 181 VMAQIWVLLLGGLGLAGLLDVWAGHDIPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLSVAGYL GAGKPYYALALLALIAPQVFFQFKYFLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 357

[Close]

BLAST of Carg20004 vs. NCBI nr
Match: XP_022144066.1 (chlorophyll synthase, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 274/370 (74.05%), Postives = 282/370 (76.22%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNTA  VR SS+ ANRVRIQ ALSPVSVSFS              RRLS++AAETD
Sbjct: 1   MALTLNTAPSVRLSSVHANRVRIQSALSPVSVSFSR-------------RRLSIVAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  ANEVKPQAPDKAPSNGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHWNFEDVAKSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWNFEDVAKSIVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           V+ QIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN 
Sbjct: 181 VITQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNF 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTL PDIVVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLTPDIVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLS+AGYL GAGKPYYALALLALIAPQVFFQFK+FLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSIAGYLLGAGKPYYALALLALIAPQVFFQFKFFLKDPVK 357

[Close]

BLAST of Carg20004 vs. NCBI nr
Match: XP_022144065.1 (chlorophyll synthase, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 274/371 (73.85%), Postives = 282/371 (76.01%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNTA  VR SS+ ANRVRIQ ALSPVSVSFS              RRLS++AAETD
Sbjct: 1   MALTLNTAPSVRLSSVHANRVRIQSALSPVSVSFSR-------------RRLSIVAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  ANEVKPQAPDKAPSNGGSSFNQLLGIKGAAQETQNKWKIRLQLTKPVTWPPLVWGVVCGA 120

Query: 138 ---GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEN 197
              GNFHWNFEDVAKSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEN
Sbjct: 121 AASGNFHWNFEDVAKSIVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEN 180

Query: 198 EVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN 257
           EV+ QIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN
Sbjct: 181 EVITQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN 240

Query: 258 CALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSL 317
            ALGASYISLPWWAGQALFGTL PDIVVLTLLYSIAG GI IVNDFKSVEGDRALGLQSL
Sbjct: 241 FALGASYISLPWWAGQALFGTLTPDIVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSL 300

Query: 318 PVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPV 329
           PVAFGAETAKWICVGAIDITQLS+AGYL GAGKPYYALALLALIAPQVFFQFK+FLKDPV
Sbjct: 301 PVAFGAETAKWICVGAIDITQLSIAGYLLGAGKPYYALALLALIAPQVFFQFKFFLKDPV 358

[Close]

BLAST of Carg20004 vs. TAIR10
Match: AT3G51820.1 (UbiA prenyltransferase family protein)

HSP 1 Score: 449.9 bits (1156), Expect = 1.5e-126
Identity = 215/248 (86.69%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EV+
Sbjct: 124 GNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVI 183

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
            Q+WVLLLGGLG+AG+LDVWAGH  P VFYLALGGSLLSYIYSAPPLKLKQNGW+GN AL
Sbjct: 184 TQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFAL 243

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
           GASYISLPWWAGQALFGTL PD+VVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 244 GASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 303

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           FG ETAKWICVGAIDITQLSVAGYL  +GKPYYALAL+ALI PQ+ FQFKYFLKDPVKYD
Sbjct: 304 FGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDPVKYD 363

Query: 321 VKYQVAIE 329
           VKYQ + +
Sbjct: 364 VKYQASAQ 371

[Close]

BLAST of Carg20004 vs. TAIR10
Match: AT2G18950.1 (homogentisate phytyltransferase 1)

HSP 1 Score: 52.4 bits (124), Expect = 6.8e-07
Identity = 49/224 (21.88%), Postives = 92/224 (41.07%), Query Frame = 0


Query: 87  FEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVL 146
           F  + +++   LM   ++ G    +N   D EID +N+PY P+ SG  S N  +A +   
Sbjct: 135 FTGILEAVVAALMMNIYIVG----LNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASF 194

Query: 147 LLGGLGLAGLLDVWAGHDFPIVFYLALGGSL-LSYIYSAPPLKLKQNGWIGN---CALGA 206
            +    L  ++  W     P+ + L +   L  +Y  + P L+ K+   +      A+ A
Sbjct: 195 SIMSFWLGWIVGSW-----PLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRA 254

Query: 207 SYISLPWW--AGQALFG---TLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSL 266
             + + ++      +FG            T   S     I +  D   +EGD+  G++S 
Sbjct: 255 IIVQIAFYLHIQTHVFGRXXXXXXXXXXATAFMSFFSVVIALFKDIPDIEGDKIFGIRSF 314

Query: 267 PVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALI 302
            V  G +   W CV  + +        L GA  P+    +++++
Sbjct: 315 SVTLGQKRVFWTCVTLLQMAY--AVAILVGATSPFIWSKVISVV 347

[Close]

BLAST of Carg20004 vs. Swiss-Prot
Match: sp|Q38833|CHLG_ARATH (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.6e-125
Identity = 215/248 (86.69%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EV+
Sbjct: 124 GNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVI 183

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
            Q+WVLLLGGLG+AG+LDVWAGH  P VFYLALGGSLLSYIYSAPPLKLKQNGW+GN AL
Sbjct: 184 TQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFAL 243

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
           GASYISLPWWAGQALFGTL PD+VVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 244 GASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 303

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           FG ETAKWICVGAIDITQLSVAGYL  +GKPYYALAL+ALI PQ+ FQFKYFLKDPVKYD
Sbjct: 304 FGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDPVKYD 363

Query: 321 VKYQVAIE 329
           VKYQ + +
Sbjct: 364 VKYQASAQ 371

[Close]

BLAST of Carg20004 vs. Swiss-Prot
Match: sp|Q5W6H5|CHLG_ORYSJ (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CHLG PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.6e-125
Identity = 218/262 (83.21%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEV+
Sbjct: 113 GNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVI 172

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
            QIW LLL GLGL  LLDVWAGHDFPI+FYLA+GGSLLSYIYSAPPLKLKQNGWIGN AL
Sbjct: 173 TQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFAL 232

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
           GASYI LPWWAGQALFGTL PDIVVLT LYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 233 GASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 292

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           FG ETAKWICVGAIDITQLSVAGYL+ +GKPYYALALL L  PQV FQF+YFLKDPVKYD
Sbjct: 293 FGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYD 352

Query: 321 VKYQVAIESEYAYILEFCSLAS 343
           VKYQ + +  +   L   +LA+
Sbjct: 353 VKYQASAQPFFVLGLLVTALAT 374

[Close]

BLAST of Carg20004 vs. Swiss-Prot
Match: sp|Q9M3W5|CHLG_AVESA (Chlorophyll synthase, chloroplastic OS=Avena sativa OX=4498 GN=CHLG PE=1 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-123
Identity = 215/262 (82.06%), Postives = 227/262 (86.64%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           GNFHW  EDV KSI CMLMSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEV+
Sbjct: 115 GNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVI 174

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
            QIWVLLLGGLGL  LLD+WAGHDFPI+FYLALGGSLLSYIYSAPPLKLKQNGWIGN AL
Sbjct: 175 TQIWVLLLGGLGLGALLDIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFAL 234

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
           GASYI LPWWAGQALFGTL PDIVVLT LYSIAG GI IVNDFKS+EGDR LGLQSLPVA
Sbjct: 235 GASYIGLPWWAGQALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVA 294

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           FG ETAKWICVGAIDITQLSVA YL   GK YYALALL L  PQV  QF+YFLKDPVKYD
Sbjct: 295 FGMETAKWICVGAIDITQLSVAAYLLSTGKLYYALALLGLTIPQVILQFQYFLKDPVKYD 354

Query: 321 VKYQVAIESEYAYILEFCSLAS 343
           VKYQ + +  + + L   +LA+
Sbjct: 355 VKYQASAQPFFVFGLLVTALAT 376

[Close]

BLAST of Carg20004 vs. Swiss-Prot
Match: sp|P33326|BCHG_CHLAA (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=bchG PE=4 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-36
Identity = 90/253 (35.57%), Postives = 131/253 (51.78%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           G   WN E + + +  M M+GP L G +Q +ND+ DRE+DAINEP+R IPSG +S   V 
Sbjct: 56  GALGWN-ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVSLRHVY 115

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
               VL   G  +A            +       G + +  YS  P++ K+NGWIGN  +
Sbjct: 116 ILTAVLTWIGASIALFXXXXXXXXXXL-------GLVFALAYSLRPIRGKRNGWIGNALV 175

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
             SY  L W AG A F  L  + V + LLYS+   GI  VNDFKS+ GD  +G++S+PV 
Sbjct: 176 AISYEGLAWMAGHAAFAPLTGESVTIALLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQ 235

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           +G   A  + V  + + Q++V G L+  G P  A  +  L+A Q     + F++DP   +
Sbjct: 236 YGKVMAARMVVTTMGVAQIAVIGLLFHWGHPVAATVVAILLAAQSIPNAR-FIRDPENNE 295

Query: 321 VKYQVAIESEYAY 334
           V +       Y +
Sbjct: 296 VFFNATAIMLYVW 299

[Close]

BLAST of Carg20004 vs. Swiss-Prot
Match: sp|P26170|BCHG_RHOCB (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=bchG PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.4e-33
Identity = 83/226 (36.73%), Postives = 125/226 (55.31%), Query Frame = 0


Query: 97  MLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLG-GLGLAG 156
           ++++GP + G +Q  NDW DR +DAINEP+RPIPSG I        +W L +   + L  
Sbjct: 57  IVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRI------PGLWGLYIAIAMSLLS 116

Query: 157 LLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWAGQAL 216
           L+  W    +   F   L G   ++ YS  P++LK++GW G   +G +Y  LPW  G A+
Sbjct: 117 LVVGWQLGSWG--FVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAV 176

Query: 217 FGTLAP-----DIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWIC 276
               A       IV++  LY++   GI  +NDFK++EGDR LG++SLP  +G E A  I 
Sbjct: 177 LLATADTSPGFPIVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIA 236

Query: 277 VGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDP 317
              + + Q  V   L+   KPY+A A+L L+  Q F+    +++DP
Sbjct: 237 CTVMGLAQALVITMLYLFSKPYHATAVLVLLCGQ-FWAMSVWMRDP 273

[Close]

BLAST of Carg20004 vs. TrEMBL
Match: tr|A0A1S3CLE7|A0A1S3CLE7_CUCME (chlorophyll synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502144 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.1e-141
Identity = 272/370 (73.51%), Postives = 278/370 (75.14%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNT   VR SSIQANRVR Q +LSPVSVSFS              RRLSV+AAETD
Sbjct: 1   MALTLNTPPSVRLSSIQANRVRFQPSLSPVSVSFSR-------------RRLSVVAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  ANEVKSQAPDKAPASGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHW  EDVAKSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWTIEDVAKSIACMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           V+ QIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN 
Sbjct: 181 VITQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNF 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTL PDI+VLTLLYSIAG GI IVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLSVAGYL GAGKPYYALALLALI PQVFFQFKYFLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIGPQVFFQFKYFLKDPVK 357

[Close]

BLAST of Carg20004 vs. TrEMBL
Match: tr|A0A0A0L1C1|A0A0A0L1C1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G311220 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 2.8e-140
Identity = 269/370 (72.70%), Postives = 276/370 (74.59%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MALTLNT   +R SSI ANRVR Q +LSPVSVSFS              RRLSV+AAETD
Sbjct: 1   MALTLNTLPSLRLSSIHANRVRFQSSLSPVSVSFSR-------------RRLSVVAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  ANEVKSKASDKAPAGGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAA 120

Query: 138 --GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 197
             GNFHW  EDVAKSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE
Sbjct: 121 ASGNFHWTIEDVAKSIACMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENE 180

Query: 198 VMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNC 257
           V+ QIWVLLLGGLGLAGLLDVWAGHDFP VFYLALGGSLLSYIYSAPPLKLKQNGWIGN 
Sbjct: 181 VITQIWVLLLGGLGLAGLLDVWAGHDFPTVFYLALGGSLLSYIYSAPPLKLKQNGWIGNF 240

Query: 258 ALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLP 317
           ALGASYISLPWWAGQALFGTL PDI+VLTLLYSIAG GI IVNDFKSVEGDRALGLQSLP
Sbjct: 241 ALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLP 300

Query: 318 VAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVK 329
           VAFGAETAKWICVGAIDITQLSVAGYL GAGKPYYALALLALI PQVFFQFKYFLKDPVK
Sbjct: 301 VAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIGPQVFFQFKYFLKDPVK 357

[Close]

BLAST of Carg20004 vs. TrEMBL
Match: tr|A0A251NWT8|A0A251NWT8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G280100 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 2.6e-133
Identity = 253/371 (68.19%), Postives = 270/371 (72.78%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MA  LNT S +R S + A+RVR Q  L+P+SVSF+              RRL+V AAETD
Sbjct: 1   MASVLNTVSSIRLSKLNASRVRTQSNLAPISVSFTR-------------RRLTVRAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  TNEAVEPQVPDKAPAKNGSSFNQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGA 120

Query: 138 ---GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEN 197
              GNFHW FEDVAKSI CM MSGPFLTGYTQT+NDWYDREIDAINEPYRPIPSGAISEN
Sbjct: 121 AASGNFHWTFEDVAKSIVCMCMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISEN 180

Query: 198 EVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN 257
           EV+ QIWVLLLGGL  AG+LDVWAGH FPIVFYLALGGS LSYIYSAPPLKLKQNGWIGN
Sbjct: 181 EVITQIWVLLLGGLSCAGILDVWAGHKFPIVFYLALGGSFLSYIYSAPPLKLKQNGWIGN 240

Query: 258 CALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSL 317
            ALGASYISLPWWAGQALFGTL PDI+VLTLLYSIAG GI IVNDFKSVEGDRA+GLQSL
Sbjct: 241 FALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRAMGLQSL 300

Query: 318 PVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPV 329
           PVAFG+ETAKWICVGAIDITQLS+AGYL GAGKPYYALAL+ALIAPQVFFQFKYFLKDPV
Sbjct: 301 PVAFGSETAKWICVGAIDITQLSIAGYLLGAGKPYYALALVALIAPQVFFQFKYFLKDPV 358

[Close]

BLAST of Carg20004 vs. TrEMBL
Match: tr|A0A2P6R8Y1|A0A2P6R8Y1_ROSCH (Putative chlorophyll synthase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0462631 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.1e-131
Identity = 253/372 (68.01%), Postives = 267/372 (71.77%), Query Frame = 0


Query: 18  MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDGLFIFPGRRLSVIAAETD 77
           MA  LNT    R S+  A+RVR    L+P+SVSFS              RR +V AAETD
Sbjct: 1   MASVLNTVPSARFSNPNASRVRTHSVLAPISVSFSR-------------RRFTVRAAETD 60

Query: 78  KNE--------------------------------------------------------- 137
            NE                                                         
Sbjct: 61  TNEEIKSQAAPDKAPASGGSSFNQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCG 120

Query: 138 ----GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE 197
               GNFHWN EDVAKSI CM MSGPFLTGYTQT+NDWYDREIDAINEPYRPIPSGAISE
Sbjct: 121 AAASGNFHWNLEDVAKSILCMSMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISE 180

Query: 198 NEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIG 257
           NEV+ QIWVLLLGGL  AG+LDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIG
Sbjct: 181 NEVITQIWVLLLGGLVSAGILDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIG 240

Query: 258 NCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQS 317
           N ALGASYISLPWWAGQALFGTL PDI+VLTLLYSIAG GI IVNDFKSVEGDRALGLQS
Sbjct: 241 NFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQS 300

Query: 318 LPVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDP 329
           LPVAFG+ETAKWICVGAIDITQLS+AGYL GAGKPYYAL L+ALIAPQVFFQFKYFLKDP
Sbjct: 301 LPVAFGSETAKWICVGAIDITQLSIAGYLLGAGKPYYALTLVALIAPQVFFQFKYFLKDP 359

[Close]

BLAST of Carg20004 vs. TrEMBL
Match: tr|A0A2P5F320|A0A2P5F320_9ROSA (Chlorophyll synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_120160 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 3.4e-130
Identity = 227/244 (93.03%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 81  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 140
           GNFHW  EDVAKS+ CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE+EV+
Sbjct: 110 GNFHWTLEDVAKSVVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEDEVI 169

Query: 141 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 200
            QIWVLLLGGLGLAGLLDVWAGH+FP+VFYLALGGSLLSYIYSAPPLKLKQNGWIGN AL
Sbjct: 170 TQIWVLLLGGLGLAGLLDVWAGHNFPVVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFAL 229

Query: 201 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 260
           GASYISLPWWAGQALFGTL+PDI+VLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 230 GASYISLPWWAGQALFGTLSPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 289

Query: 261 FGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 320
           FG ETAKWICVGAIDITQ+SVAGYL GAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD
Sbjct: 290 FGTETAKWICVGAIDITQISVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 349

Query: 321 VKYQ 325
           VKYQ
Sbjct: 350 VKYQ 353

The following BLAST results are available for this feature:

BLAST of Carg20004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949992.1	3.6e-155	79.19	chlorophyll synthase, chloroplastic-like [Cucurbita moschata]	[more]
XP_023543339.1	2.8e-152	78.38	chlorophyll synthase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022978209.1	1.1e-151	78.11	chlorophyll synthase, chloroplastic [Cucurbita maxima]	[more]
XP_022144066.1	1.4e-143	74.05	chlorophyll synthase, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022144065.1	1.8e-143	73.85	chlorophyll synthase, chloroplastic isoform X1 [Momordica charantia]	[more]

BLAST of Carg20004 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51820.1	1.5e-126	86.69	UbiA prenyltransferase family protein	[more]
AT2G18950.1	6.8e-07	21.88	homogentisate phytyltransferase 1	[more]

BLAST of Carg20004 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38833\|CHLG_ARATH	2.6e-125	86.69	Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2...	[more]
sp\|Q5W6H5\|CHLG_ORYSJ	2.6e-125	83.21	Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
sp\|Q9M3W5\|CHLG_AVESA	1.4e-123	82.06	Chlorophyll synthase, chloroplastic OS=Avena sativa OX=4498 GN=CHLG PE=1 SV=1	[more]
sp\|P33326\|BCHG_CHLAA	1.3e-36	35.57	Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain AT...	[more]
sp\|P26170\|BCHG_RHOCB	2.4e-33	36.73	Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus (strain ATCC...	[more]

BLAST of Carg20004 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLE7\|A0A1S3CLE7_CUCME	1.1e-141	73.51	chlorophyll synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502144 PE=4...	[more]
tr\|A0A0A0L1C1\|A0A0A0L1C1_CUCSA	2.8e-140	72.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G311220 PE=4 SV=1	[more]
tr\|A0A251NWT8\|A0A251NWT8_PRUPE	2.6e-133	68.19	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G280100 PE=4 SV=1	[more]
tr\|A0A2P6R8Y1\|A0A2P6R8Y1_ROSCH	1.1e-131	68.01	Putative chlorophyll synthase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g046263...	[more]
tr\|A0A2P5F320\|A0A2P5F320_9ROSA	3.4e-130	93.03	Chlorophyll synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_120160 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046408	chlorophyll synthetase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015995	chlorophyll biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR000537	UbiA_prenyltransferase
IPR006372	Chl_synth
IPR011799	ChlG

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046408	chlorophyll synthetase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20004-RA	Carg20004-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.357.140		coord: 56..222 e-value: 3.7E-10 score: 41.6
None	No IPR available	PANTHER	PTHR42723	FAMILY NOT NAMED	coord: 79..326
IPR011799	Chlorophyll synthase, ChlG	TIGRFAM	TIGR02056	TIGR02056	coord: 79..328 e-value: 1.0E-144 score: 479.7
IPR006372	Bacteriochlorophyll/chlorophyll synthetase	TIGRFAM	TIGR01476	TIGR01476	coord: 81..335 e-value: 2.2E-92 score: 307.5
IPR006372	Bacteriochlorophyll/chlorophyll synthetase	CDD	cd13958	PT_UbiA_chlorophyll	coord: 81..326 e-value: 2.36772E-116 score: 340.746
IPR000537	UbiA prenyltransferase family	PFAM	PF01040	UbiA	coord: 97..314 e-value: 2.9E-38 score: 131.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20004	Cla018095	Watermelon (97103) v1	carwmB0554
Carg20004	Csa4G311220	Cucumber (Chinese Long) v2	carcuB0585
Carg20004	MELO3C026000	Melon (DHL92) v3.5.1	carmeB0562
Carg20004	ClCG04G006920	Watermelon (Charleston Gray)	carwcgB0542
Carg20004	CSPI04G15970	Wild cucumber (PI 183967)	carcpiB0591
Carg20004	Cucsa.067310	Cucumber (Gy14) v1	carcgyB0632
Carg20004	CmaCh07G010590	Cucurbita maxima (Rimu)	carcmaB0778
Carg20004	CmaCh03G003430	Cucurbita maxima (Rimu)	carcmaB0775
Carg20004	CmoCh07G011100	Cucurbita moschata (Rifu)	carcmoB0757
Carg20004	CmoCh03G003560	Cucurbita moschata (Rifu)	carcmoB0753
Carg20004	Lsi01G015540	Bottle gourd (USVL1VR-Ls)	carlsiB503
Carg20004	Cp4.1LG10g07890	Cucurbita pepo (Zucchini)	carcpeB0785
Carg20004	Cp4.1LG19g02790	Cucurbita pepo (Zucchini)	carcpeB0790
Carg20004	CsGy4G015270	Cucumber (Gy14) v2	carcgybB0561
Carg20004	MELO3C026000.2	Melon (DHL92) v3.6.1	carmedB0568
Carg20004	CsaV3_4G026340	Cucumber (Chinese Long) v3	carcucB0592
Carg20004	Cla97C04G073550	Watermelon (97103) v2	carwmbB0583
Carg20004	Bhi03G001694	Wax gourd	carwgoB0666

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20004	Carg13286	Silver-seed gourd	carcarB514

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20004	Cucurbita maxima (Rimu)	carcmaB0776
Carg20004	Silver-seed gourd	carcarB022
Carg20004	Silver-seed gourd	carcarB195
Carg20004	Silver-seed gourd	carcarB301
Carg20004	Silver-seed gourd	carcarB517
Carg20004	Cucumber (Gy14) v2	carcgybB0562
Carg20004	Cucumber (Gy14) v1	carcgyB0634
Carg20004	Cucurbita maxima (Rimu)	carcmaB0777
Carg20004	Cucurbita maxima (Rimu)	carcmaB0773
Carg20004	Cucurbita maxima (Rimu)	carcmaB0774
Carg20004	Cucurbita moschata (Rifu)	carcmoB0751
Carg20004	Cucurbita moschata (Rifu)	carcmoB0752
Carg20004	Cucurbita moschata (Rifu)	carcmoB0754
Carg20004	Cucurbita moschata (Rifu)	carcmoB0756
Carg20004	Cucurbita pepo (Zucchini)	carcpeB0786
Carg20004	Cucurbita pepo (Zucchini)	carcpeB0791
Carg20004	Cucurbita pepo (Zucchini)	carcpeB0792
Carg20004	Wild cucumber (PI 183967)	carcpiB0590
Carg20004	Wild cucumber (PI 183967)	carcpiB0592
Carg20004	Cucumber (Chinese Long) v2	carcuB0584
Carg20004	Cucumber (Chinese Long) v2	carcuB0586
Carg20004	Cucumber (Chinese Long) v3	carcucB0594
Carg20004	Bottle gourd (USVL1VR-Ls)	carlsiB505
Carg20004	Melon (DHL92) v3.5.1	carmeB0559
Carg20004	Melon (DHL92) v3.5.1	carmeB0560
Carg20004	Melon (DHL92) v3.6.1	carmedB0565
Carg20004	Melon (DHL92) v3.6.1	carmedB0566
Carg20004	Watermelon (Charleston Gray)	carwcgB0540
Carg20004	Watermelon (Charleston Gray)	carwcgB0541
Carg20004	Watermelon (97103) v1	carwmB0553
Carg20004	Watermelon (97103) v2	carwmbB0581
Carg20004	Watermelon (97103) v2	carwmbB0582
Carg20004	Wax gourd	carwgoB0665