Carg19978 (gene) Silver-seed gourd

Overview
NameCarg19978
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionmRNA capping enzyme, putative
LocationCucurbita_argyrosperma_scaffold_167 : 203730 .. 204672 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGAGTTTATTGAAAAGTTTCTGAGGGAGTGTCTGACTCGCCTTCCAAGTTGAACCTGATGTATTCTGTTTATGAGTTCATGAATCCACATTTGTACTCGTTTGTATATAGATGCTACCGCGGTTATGTATCAGAATGCTGGGGCCTTGATAACTACTATCTCTTGCATATGTGGCTAATTCTGGCTGTATCTATCTTTATCAACCTTTACCCTCAATGTTTCATTATCTATGCCAAAAATCCTGGATAACTAGGTGGTCATTGGTTTAAAATCTTTGGGTTTGTTGAATGAGATTCTACTTTTGACTGCAAATATTTTATAGACCGAATAATATATAGTTCTTCAGTGTATATTATTTTAGGTCTCATTTTGAAACTTTTGCAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTCTTTTCCTACCAATTTGATATGCCGTTTTGCTGAGAGTTCGAAACCTGCGTCTAATAATATTTCTCAACGTTTGAAATAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCATACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGTGATGATAGCTAGACGATGCGATGCACAAATACAGAAATTAGGTAATCTTTGGATGAGATGCTCAAAAGGAGTTCCTACAGGATGTTGTTCGCCGTAGCTTTGCCTTGTTGCTATCGTCGTGTGTGCAGCTGGCGTGTCTACTTTCATCCAGTCATTGCACTTTATAGATGTTTTCAGTTAGAGCTTTGAAATCCATTTTT

mRNA sequence

ATGAAGTCTCATTTTGAAACTTTTGCAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCATACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGTGATGATAGCTAGACGATGCGATGCACAAATACAGAAATTAGGTAATCTTTGGATGAGATGCTCAAAAGGAGTTCCTACAGGATGTTGTTCGCCGTAGCTTTGCCTTGTTGCTATCTCATTGCACTTTATAGATGTTTTCAGTTAGAGCTTTGAAATCCATTTTT

Coding sequence (CDS)

ATGAAGTCTCATTTTGAAACTTTTGCAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCATACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGTGA

Protein sequence

MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Homology
[Close]
BLAST of Carg19978 vs. NCBI nr
Match: XP_022950699.1 (mRNA-capping enzyme-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-45
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN
Sbjct: 580 MEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 639

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 640 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 678

[Close]
BLAST of Carg19978 vs. NCBI nr
Match: XP_022950697.1 (mRNA-capping enzyme-like isoform X1 [Cucurbita moschata] >XP_022950698.1 mRNA-capping enzyme-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-45
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN
Sbjct: 581 MEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 640

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 641 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 679

[Close]
BLAST of Carg19978 vs. NCBI nr
Match: XP_023543692.1 (mRNA-capping enzyme-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543694.1 mRNA-capping enzyme-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-45
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN
Sbjct: 580 MEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 639

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 640 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 678

[Close]
BLAST of Carg19978 vs. NCBI nr
Match: XP_023543695.1 (mRNA-capping enzyme-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-45
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN
Sbjct: 579 MEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 638

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 639 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 677

[Close]
BLAST of Carg19978 vs. NCBI nr
Match: XP_022978110.1 (mRNA-capping enzyme-like isoform X1 [Cucurbita maxima] >XP_022978111.1 mRNA-capping enzyme-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 5.4e-45
Identity = 91/99 (91.92%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMR+RTDKTTPNDFNTYRKVMRSIKDN
Sbjct: 580 MEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRVRTDKTTPNDFNTYRKVMRSIKDN 639

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 640 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 678

[Close]
BLAST of Carg19978 vs. TAIR10
Match: AT3G09100.2 (mRNA capping enzyme family protein)

HSP 1 Score: 136.7 bits (343), Expect = 7.6e-33
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0 

Query: 10  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKE 69
           D DP+ YSGKIVECSWD DE+VWV MR+R DK+TPND NT+RKVMRSIKDNITEE LL+E
Sbjct: 589 DSDPAEYSGKIVECSWDQDEKVWVSMRVRVDKSTPNDINTFRKVMRSIKDNITEEVLLQE 648

Query: 70  IHEIIRLPMYADRIRNDSKAAQ 92
           I EIIRLPMYADRI+ DSKAA+
Sbjct: 649 IREIIRLPMYADRIQMDSKAAR 670

[Close]
BLAST of Carg19978 vs. TAIR10
Match: AT5G01290.1 (mRNA capping enzyme family protein)

HSP 1 Score: 131.0 bits (328), Expect = 4.2e-31
Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0 

Query: 10  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKE 69
           D DPS Y+GKIVEC+WD D++VW  MRIR DKTTPND NT RKV++SI DNITEE LL+E
Sbjct: 574 DSDPSSYNGKIVECAWDKDKKVWFSMRIRVDKTTPNDINTARKVIKSINDNITEEVLLQE 633

Query: 70  IHEIIRLPMYADRIRNDSKAAQ 92
           I EIIRLPMYADRIRNDS+AA+
Sbjct: 634 IREIIRLPMYADRIRNDSQAAR 655

[Close]
BLAST of Carg19978 vs. TAIR10
Match: AT5G28210.1 (mRNA capping enzyme family protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 10  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKE 69
           D D + Y GKIVECSWD +++VWV +RIR DK+ PN   T R V++ I+D++T+E LLKE
Sbjct: 535 DNDLASYCGKIVECSWDKEKKVWVSLRIRVDKSKPNGIGTGRSVIKCIEDDLTKEVLLKE 594

Query: 70  IHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           I EII LPMY +RI ND+K A       R+
Sbjct: 595 IKEIILLPMYVERIENDTKEAARRKHGNRK 624

[Close]
BLAST of Carg19978 vs. Swiss-Prot
Match: sp|P40997|MCE1_SCHPO (mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ceg1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 17  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRL 76
           S +IVEC  D DE  W  +R R DK   N  +T + V++SI+D +++EDLLKE+  IIR 
Sbjct: 308 SERIVECYLD-DENRWRFLRFRDDKRDANHISTVKSVLQSIEDGVSKEDLLKEM-PIIRE 367

Query: 77  PMY 80
             Y
Sbjct: 368 AYY 368

[Close]
BLAST of Carg19978 vs. Swiss-Prot
Match: sp|Q6FQ31|MCE1_CANGA (mRNA-capping enzyme subunit alpha OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CEG1 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 22/57 (38.60%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 17  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI 74
           +G+IVEC+ D +   W  +R R DK   N  +  +KV+ SI D++T +DL + + EI
Sbjct: 344 NGRIVECTKDPETGSWTMLRFRDDKLNGNHTSVVQKVLESISDSVTIDDLAESVPEI 400

[Close]
BLAST of Carg19978 vs. Swiss-Prot
Match: sp|Q6CWR0|MCE1_KLULA (mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=CEG1 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 0 

Query: 17  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI-IR 76
           +G+IVECS D +   W  +R R DK   N  +  +KV+ SI D+++ +DL + + E+  R
Sbjct: 345 NGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSVSLDDLEQVVDEMRSR 404

Query: 77  LPMYADRIRNDSKAAQHTNSTR 98
                  ++N  K   H  S R
Sbjct: 405 WKEREQGLKNAQKQFNHQASAR 426

[Close]
BLAST of Carg19978 vs. Swiss-Prot
Match: sp|O60942|MCE1_HUMAN (mRNA-capping enzyme OS=Homo sapiens OX=9606 GN=RNGTT PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI 71
           Y  KI+EC ++++   WV MR RTDK+ PN +NT   V  SI + +T+E L + I
Sbjct: 510 YDNKIIECKFENNS--WVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562

[Close]
BLAST of Carg19978 vs. Swiss-Prot
Match: sp|O55236|MCE1_MOUSE (mRNA-capping enzyme OS=Mus musculus OX=10090 GN=Rngtt PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.1e-04
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0 

Query: 16  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI 71
           Y  KI+EC ++++   WV MR R DK+ PN +NT   V  SI + +T+E L + I
Sbjct: 510 YDNKIIECKFENNS--WVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562

[Close]
BLAST of Carg19978 vs. TrEMBL
Match: tr|A0A1S3BKG4|A0A1S3BKG4_CUCME (mRNA-capping enzyme isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491007 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDE+VWVCMRIRTDKTTPNDFNTY+KVMRSI+DN
Sbjct: 585 MEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDN 644

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 645 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 683

[Close]
BLAST of Carg19978 vs. TrEMBL
Match: tr|A0A1S3BL44|A0A1S3BL44_CUCME (mRNA-capping enzyme isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491007 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDE+VWVCMRIRTDKTTPNDFNTY+KVMRSI+DN
Sbjct: 584 MEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDN 643

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 644 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 682

[Close]
BLAST of Carg19978 vs. TrEMBL
Match: tr|A0A0A0L2J5|A0A0A0L2J5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G307930 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDN 60
           M+ +   F DGDPSFYSGKIVECSWDSDE+VWVCMRIRTDKTTPNDFNTY+KVMRSI+DN
Sbjct: 584 MEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDN 643

Query: 61  ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Sbjct: 644 ITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 682

[Close]
BLAST of Carg19978 vs. TrEMBL
Match: tr|A0A1Q3BKJ0|A0A1Q3BKJ0_CEPFO (DSPc domain-containing protein/mRNA_cap_enzyme domain-containing protein/mRNA_cap_C domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12040 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.2e-37
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 1   MKSHFETFADG-DPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKD 60
           M+ +   F DG DPS YSGKI+ECSWDS+E++WVCMR R DK+TPNDFNTYRKVMRSIKD
Sbjct: 583 MEGNSVLFKDGSDPSSYSGKIIECSWDSEEQIWVCMRTRPDKSTPNDFNTYRKVMRSIKD 642

Query: 61  NITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           NITE+ LL EIHEIIRLPMYADRIRNDSKA QHTNS RRR
Sbjct: 643 NITEDVLLNEIHEIIRLPMYADRIRNDSKAHQHTNSARRR 682

[Close]
BLAST of Carg19978 vs. TrEMBL
Match: tr|A0A2C9V9H9|A0A2C9V9H9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G101800 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 79/100 (79.00%), Postives = 88/100 (88.00%), Query Frame = 0 

Query: 1   MKSHFETFADG-DPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKD 60
           M+ +   F DG DPS YSGKI+ECSWDSDE+VWVCMR+RTDK+TPN+FNTYRKVMRSI+D
Sbjct: 580 MEGNAVVFRDGSDPSSYSGKIIECSWDSDEQVWVCMRVRTDKSTPNEFNTYRKVMRSIRD 639

Query: 61  NITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 100
           NITEE LL EI+EIIRLPMYADRIRNDSKA QHT S RRR
Sbjct: 640 NITEEVLLNEIYEIIRLPMYADRIRNDSKAHQHTASARRR 679

The following BLAST results are available for this feature:
BLAST of Carg19978 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950699.14.2e-4592.93mRNA-capping enzyme-like isoform X2 [Cucurbita moschata][more]
XP_022950697.14.2e-4592.93mRNA-capping enzyme-like isoform X1 [Cucurbita moschata] >XP_022950698.1 mRNA-ca... [more]
XP_023543692.14.2e-4592.93mRNA-capping enzyme-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543694.1... [more]
XP_023543695.14.2e-4592.93mRNA-capping enzyme-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022978110.15.4e-4591.92mRNA-capping enzyme-like isoform X1 [Cucurbita maxima] >XP_022978111.1 mRNA-capp... [more]
BLAST of Carg19978 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G09100.27.6e-3379.27mRNA capping enzyme family protein[more]
AT5G01290.14.2e-3175.61mRNA capping enzyme family protein[more]
AT5G28210.11.3e-2153.33mRNA capping enzyme family protein[more]
BLAST of Carg19978 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P40997|MCE1_SCHPO1.7e-0546.03mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
sp|Q6FQ31|MCE1_CANGA4.9e-0538.60mRNA-capping enzyme subunit alpha OS=Candida glabrata (strain ATCC 2001 / CBS 13... [more]
sp|Q6CWR0|MCE1_KLULA1.1e-0432.93mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis (strain ATCC 8585 / CB... [more]
sp|O60942|MCE1_HUMAN1.4e-0443.64mRNA-capping enzyme OS=Homo sapiens OX=9606 GN=RNGTT PE=1 SV=1[more]
sp|O55236|MCE1_MOUSE7.1e-0441.82mRNA-capping enzyme OS=Mus musculus OX=10090 GN=Rngtt PE=1 SV=1[more]
BLAST of Carg19978 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BKG4|A0A1S3BKG4_CUCME4.0e-4489.90mRNA-capping enzyme isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491007 PE=4 SV=1[more]
tr|A0A1S3BL44|A0A1S3BL44_CUCME4.0e-4489.90mRNA-capping enzyme isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491007 PE=4 SV=1[more]
tr|A0A0A0L2J5|A0A0A0L2J5_CUCSA4.0e-4489.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G307930 PE=4 SV=1[more]
tr|A0A1Q3BKJ0|A0A1Q3BKJ0_CEPFO6.2e-3779.00DSPc domain-containing protein/mRNA_cap_enzyme domain-containing protein/mRNA_ca... [more]
tr|A0A2C9V9H9|A0A2C9V9H9_MANES1.1e-3679.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G101800 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR013846mRNA_cap_enzyme_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19978-RACarg19978-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 3..77
e-value: 1.2E-24
score: 89.4
NoneNo IPR availablePANTHERPTHR10367MRNA-CAPPING ENZYMEcoord: 11..93
NoneNo IPR availablePANTHERPTHR10367:SF11SUBFAMILY NOT NAMEDcoord: 11..93
IPR013846mRNA capping enzyme, C-terminalPFAMPF03919mRNA_cap_Ccoord: 5..67
e-value: 2.5E-20
score: 73.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 15..85

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg19978Cucurbita maxima (Rimu)carcmaB0776
Carg19978Silver-seed gourdcarcarB022
Carg19978Silver-seed gourdcarcarB098
Carg19978Silver-seed gourdcarcarB195
Carg19978Silver-seed gourdcarcarB301
Carg19978Silver-seed gourdcarcarB514
Carg19978Silver-seed gourdcarcarB517
Carg19978Cucumber (Gy14) v2carcgybB0560
Carg19978Cucumber (Gy14) v2carcgybB0561
Carg19978Cucumber (Gy14) v2carcgybB0562
Carg19978Cucumber (Gy14) v1carcgyB0632
Carg19978Cucumber (Gy14) v1carcgyB0634
Carg19978Cucumber (Gy14) v1carcgyB0635
Carg19978Cucurbita maxima (Rimu)carcmaB0777
Carg19978Cucurbita maxima (Rimu)carcmaB0773
Carg19978Cucurbita maxima (Rimu)carcmaB0774
Carg19978Cucurbita maxima (Rimu)carcmaB0775
Carg19978Cucurbita maxima (Rimu)carcmaB0778
Carg19978Cucurbita moschata (Rifu)carcmoB0751
Carg19978Cucurbita moschata (Rifu)carcmoB0752
Carg19978Cucurbita moschata (Rifu)carcmoB0753
Carg19978Cucurbita moschata (Rifu)carcmoB0754
Carg19978Cucurbita moschata (Rifu)carcmoB0755
Carg19978Cucurbita moschata (Rifu)carcmoB0756
Carg19978Cucurbita moschata (Rifu)carcmoB0757
Carg19978Cucurbita pepo (Zucchini)carcpeB0785
Carg19978Cucurbita pepo (Zucchini)carcpeB0786
Carg19978Cucurbita pepo (Zucchini)carcpeB0790
Carg19978Cucurbita pepo (Zucchini)carcpeB0791
Carg19978Cucurbita pepo (Zucchini)carcpeB0792
Carg19978Wild cucumber (PI 183967)carcpiB0591
Carg19978Wild cucumber (PI 183967)carcpiB0592
Carg19978Cucumber (Chinese Long) v2carcuB0584
Carg19978Cucumber (Chinese Long) v2carcuB0585
Carg19978Cucumber (Chinese Long) v2carcuB0586
Carg19978Cucumber (Chinese Long) v3carcucB0594
Carg19978Cucumber (Chinese Long) v3carcucB0591
Carg19978Cucumber (Chinese Long) v3carcucB0592
Carg19978Bottle gourd (USVL1VR-Ls)carlsiB503
Carg19978Bottle gourd (USVL1VR-Ls)carlsiB504
Carg19978Bottle gourd (USVL1VR-Ls)carlsiB505
Carg19978Melon (DHL92) v3.5.1carmeB0559
Carg19978Melon (DHL92) v3.5.1carmeB0560
Carg19978Melon (DHL92) v3.5.1carmeB0561
Carg19978Melon (DHL92) v3.6.1carmedB0565
Carg19978Melon (DHL92) v3.6.1carmedB0566
Carg19978Melon (DHL92) v3.6.1carmedB0567
Carg19978Watermelon (Charleston Gray)carwcgB0540
Carg19978Watermelon (Charleston Gray)carwcgB0541
Carg19978Watermelon (Charleston Gray)carwcgB0542
Carg19978Watermelon (Charleston Gray)carwcgB0543
Carg19978Watermelon (97103) v1carwmB0553
Carg19978Watermelon (97103) v1carwmB0554
Carg19978Watermelon (97103) v1carwmB0555
Carg19978Watermelon (97103) v2carwmbB0581
Carg19978Watermelon (97103) v2carwmbB0582
Carg19978Watermelon (97103) v2carwmbB0583
Carg19978Wax gourdcarwgoB0664
Carg19978Wax gourdcarwgoB0665
Carg19978Wax gourdcarwgoB0666