Carg19874 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGGTTGGCGCACTTCATCTATAAGGAGAGAAAACGAACTTATCAAGGTGATGAGCCACTTGATTTTCGTATGTTTCCATTTTATCATCATTGAAAGCATTTCTAATCATAAGAACATAGAGAGATGAGAAATCTTGAAGGAGATTGGGTTGAGAATAGATATTATTGAGTCGTTGACACTAGGGAATTCCTTCTTGAATGTCTGTATGTGTGTGTGTGTGTATATATGCACATGATCTAGTTAGGAGCAATGTACATTATCATTCTGACATCTTCTAAAATTCTTGGAAGCCCCCTCGCCGATCATTGGTTGGTTACAAGCATGTTGTAGACGTAGAATACTGTCCTCCTGTTTCCTCCGCTGGTCCGCATTTCCCCCCTGAAGCAGCTCAAGCAAAGGAGGCAGCCCAAAAATCACCAACCACACACAACACGGTGGATTATCATGAAATCATGGAAGGTATGAAACCCCAACTCCAGTAGGAGTTTAAACGTGGTGATTATTAGATGATTGTTTCCTTGCTCAATGTCACATTTTCTCTCCAGAGGAGATGATTCGTGGCTTGCAGCAGTTGGGATGGATAAAAGTTGATGTCAGCTTTCATTCCTCATTCTGGCCATTCTTTGCACATAACAACATCCACGTTCGTCTCTGATCGCTCTATTTCAAGCTGTTTCTTCTGCTTCTGTTTCTTATACGGAATGTATAATGACTTCAGGTGAAAAACGAATGGCTTTACAATGCTGGTGCTGGCGTGGTGGCTCATGTTGCAGACACCCTCAAGCAACAAGAACCGTCTTCAGTTGCCCCGGTGGCTAGCTTATAGCAGTAAGCCTTATCTCTGTGCAGTAGAATTTAACCACGCTGAAGAATCAGCAGAGAATATCACAGATTATTTGTGTTGTCATAGTTAAGTATATTATAGATTGGATGTAAGCTTGTCACATGTAAAAAGCTTAATCAAGGAGAAACTAAGGCTAATTAATTCTACATTTACTACAATAATTATGCTGAATAAAAAGCGACATTGATCAACCAAGTAGATGATTAGCTATCAAGTAGGAGTTGTTATGGTCGTGTTTCTTGATGATTGGTCTATTCATTGTAGCGACGAAGAACTTGTTGTTCTTCCAAGTTGTTTTGACTTCTAATAATTGAAACTATAAAATAAGGATTAGGCAGCTATCTCAATTCTCTTGCACGTCAGTCAATTGGTTG ATGGTTGGTTGGCGCACTTCATCTATAAGGAGAGAAAACGAACTTATCAAGCCCCCTCGCCGATCATTGGTTGGTTACAAGCATGTTGTAGACGTAGAATACTGTCCTCCTGTTTCCTCCGCTGGTCCGCATTTCCCCCCTGAAGCAGCTCAAGCAAAGGAGGCAGCCCAAAAATCACCAACCACACACAACACGGTGGATTATCATGAAATCATGGAAGAGGAGATGATTCGTGGCTTGCAGCAGTTGGGATGGATAAAAGTTGATGTCAGCTTTCATTCCTCATTCTGGCCATTCTTTGCACATAACAACATCCACGTGAAAAACGAATGGCTTTACAATGCTGGTGCTGGCGTGGTGGCTCATGTTGCAGACACCCTCAAGCAACAAGAACCGTCTTCAGTTGCCCCGGTGGCTAGCTTATAGCAGTAAGCCTTATCTCTGTGCAGTAGAATTTAACCACGCTGAAGAATCAGCAGAGAATATCACAGATTATTTGTGTTGTCATAGTTAAGTATATTATAGATTGGATGTAAGCTTGTCACATGTAAAAAGCTTAATCAAGGAGAAACTAAGGCTAATTAATTCTACATTTACTACAATAATTATGCTGAATAAAAAGCGACATTGATCAACCAAGTAGATGATTAGCTATCAAGTAGGAGTTGTTATGGTCGTGTTTCTTGATGATTGGTCTATTCATTGTAGCGACGAAGAACTTGTTGTTCTTCCAAGTTGTTTTGACTTCTAATAATTGAAACTATAAAATAAGGATTAGGCAGCTATCTCAATTCTCTTGCACGTCAGTCAATTGGTTG ATGGTTGGTTGGCGCACTTCATCTATAAGGAGAGAAAACGAACTTATCAAGCCCCCTCGCCGATCATTGGTTGGTTACAAGCATGTTGTAGACGTAGAATACTGTCCTCCTGTTTCCTCCGCTGGTCCGCATTTCCCCCCTGAAGCAGCTCAAGCAAAGGAGGCAGCCCAAAAATCACCAACCACACACAACACGGTGGATTATCATGAAATCATGGAAGAGGAGATGATTCGTGGCTTGCAGCAGTTGGGATGGATAAAAGTTGATGTCAGCTTTCATTCCTCATTCTGGCCATTCTTTGCACATAACAACATCCACGTGAAAAACGAATGGCTTTACAATGCTGGTGCTGGCGTGGTGGCTCATGTTGCAGACACCCTCAAGCAACAAGAACCGTCTTCAGTTGCCCCGGTGGCTAGCTTATAG MVGWRTSSIRRENELIKPPRRSLVGYKHVVDVEYCPPVSSAGPHFPPEAAQAKEAAQKSPTTHNTVDYHEIMEEEMIRGLQQLGWIKVDVSFHSSFWPFFAHNNIHVKNEWLYNAGAGVVAHVADTLKQQEPSSVAPVASL
BLAST of Carg19874 vs. NCBI nr
Match: XP_022927575.1 (uncharacterized protein LOC111434365 isoform X1 [Cucurbita moschata]) HSP 1 Score: 294.3 bits (752), Expect = 2.2e-76 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg19874 vs. NCBI nr
Match: XP_022927576.1 (putative lipase C4A8.10 isoform X2 [Cucurbita moschata]) HSP 1 Score: 294.3 bits (752), Expect = 2.2e-76 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg19874 vs. NCBI nr
Match: XP_023520181.1 (putative lipase C4A8.10 [Cucurbita pepo subsp. pepo] >XP_023520183.1 putative lipase C4A8.10 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.9 bits (751), Expect = 2.9e-76 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg19874 vs. NCBI nr
Match: XP_023001113.1 (putative lipase YDL109C [Cucurbita maxima]) HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75 Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Carg19874 vs. NCBI nr
Match: XP_011657777.1 (PREDICTED: putative lipase C4A8.10 isoform X1 [Cucumis sativus] >KGN65639.1 hypothetical protein Csa_1G476000 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70 Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of Carg19874 vs. TAIR10
Match: AT1G29120.5 (Hydrolase-like protein family) HSP 1 Score: 229.9 bits (585), Expect = 9.4e-61 Identity = 108/134 (80.60%), Postives = 121/134 (90.30%), Query Frame = 0
BLAST of Carg19874 vs. TAIR10
Match: AT4G25770.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16 Identity = 53/126 (42.06%), Postives = 67/126 (53.17%), Query Frame = 0
BLAST of Carg19874 vs. TAIR10
Match: AT1G10040.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 78.2 bits (191), Expect = 4.6e-15 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0
BLAST of Carg19874 vs. TAIR10
Match: AT5G51180.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15 Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of Carg19874 vs. TrEMBL
Match: tr|A0A0A0LX84|A0A0A0LX84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G476000 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 9.3e-71 Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of Carg19874 vs. TrEMBL
Match: tr|A0A1S4DUK9|A0A1S4DUK9_CUCME (putative lipase YOR059C isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486851 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.0e-69 Identity = 131/141 (92.91%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of Carg19874 vs. TrEMBL
Match: tr|A0A1S3B889|A0A1S3B889_CUCME (uncharacterized protein LOC103486851 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486851 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.0e-69 Identity = 131/141 (92.91%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of Carg19874 vs. TrEMBL
Match: tr|A0A1S3B7J4|A0A1S3B7J4_CUCME (uncharacterized protein LOC103486851 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486851 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.0e-69 Identity = 131/141 (92.91%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of Carg19874 vs. TrEMBL
Match: tr|A0A2I4G3Q2|A0A2I4G3Q2_9ROSI (uncharacterized protein LOC109004441 isoform X2 OS=Juglans regia OX=51240 GN=LOC109004441 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.2e-62 Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |