Carg19812 (gene) Silver-seed gourd

Overview
NameCarg19812
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein trichome birefringence-like 5
LocationCucurbita_argyrosperma_scaffold_067 : 140749 .. 142716 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAACAATAGAAGAAGGATGAACAAGAATGTTCTTAAAAATTTCGAAAATGGTGAAGAACTCCCTCACTCTGCCTGGGAGACAGACGCAAGAGATACCGTGAATTTGGCTAAATCCGAACTTTGTTCATCTTTTATCCACCACCCGTTTGCAGATCACACACTGAAACCTTCCTCACTTTGCTCCTCCAATGGCGTTTTCCTCTTTCCCCAATTATCGCTTTGCCTTCGCCCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTTATCTTCTTCACCAAACGAAACGCCGACGTTTCCCTCTTTCTCTACCAAGATCTCTCCTCCCAAACCCCATTTACTGTCTATCTTGCTCCTCCTCCTTCAATAGCCGAAACCCAGATTTCTTTTCCCGATTCTGGGTCTGATTCTTCTGGCATTGAATCCTTAACGAACCCATCTGCTCAAGAAACAGAGTTTTCTAATGATCAAATTGAGGATCGGCTCTCTGTTAATGGCGAAAATGGCTCGGTTTCTGATGGTGATGTTGCTGTTGGTTCTATGAGGGCTGATGATGGTCCGGATTTGTCAGTGGAGGGGCTGCAGCAATGTGATCTTTACATGGGAAGCTGGGTTAAAGATGAGGAACATTATCCGGTTTATCGAGTGGGTTCTTGCCCCTATGTTGATGAGGCTTATGACTGTGGGAATAATGGGAGAAATGATTCTGAGTATACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTTCCGAGGTATGTGCTTCTATGGTTGTTTTTGTAGATGCGTTTGTGTGGATATATCTTTCTTTGCCTGCACAATTTGATGTCGAAATTAGGAACGTATGTTCATTATTTTTTGCTGGACATGTTATTTAGAACACATTTGAAGCAGAGAACATAAGATTTCACCTGTTTTTGGATCACAACACGACATAGCTAAGTACTTAATCATTACCAAATGTGCTGCTAGTAGAACAAAATTTCTTTGTCGTTTTCATTCTAATTGTTATTTGTTATTCTTTTTATGAATGGTAGAGAAAGAAAATGAATAATAGTAATAGTAATAAGTGCATTCAGAAAACAAAGCCTACAAAAGGGAGCTGAACTACAATAAGGGGCTTCAACATTGAACCGAACCGAAGGGGCGATTGTAATTAACCTCTAAGTCTTTTTGCAATGATCCTCTAAGGGGGGTTTGCAATCTAGTAAAATAAGACTTAGAGGATCATTGCAAAAAGACCTCAACACTGAACCGAAGTCGAAAGAGAAACATAGAATCTAACTAGGGACCAAACATCACTAGAAGATCTCTCCCAACCCTTAAAGATTCTATTATTCCTCTCAAAATAGCACACACCCGAACTTGCCACGAAATGAATCCTTTCTCATGGAAAGACAAATGGTGAAGAAGTTCCTCAATCATCTCTAACTCTGAGAGCTGACAAAGTGAAAGTCGAACGTCTAAAAGAACTACTCTAAACAACATCTGCAAAATCACATCTCTAGAGAATATAATGGAGATCCTCTATCGCCCTTCTACAAAGAATACAACAAAGTGACTCAACTTAGATAGACCCCTTACCCATGATCTGATCCATCCATGGTGTTAACTCTTTCGTGCATAACGTGTCACACGAAGGATGTAACCTTCTTGGGAATCTTCACCTTTCGTACAAAGGAAACAATAGAACTATTCAACAGGGAAAAAGTAGCCAAACATCAAAAGAAGAAGCTGAAGGAAAAGCCTTTGGATGGAGGAGGAGTCCAAAGGCGAACATCCACATTATTGAGGCTAACGCAAAACTACCTGAGGAAAGACAACATAGCTAGAACATTCGTCCTTTCCCTATCGGTCAACAGATGTCGGAACCTCCAACAAGGGAGAGGGAAAGCTCTCGTAATGAGAGGATTGAAGCCACCGATTGATTCCTCAAAGAAGACAACTGATATAACTAGGGAAGCTTGA

mRNA sequence

AAAAAAACAATAGAAGAAGGATGAACAAGAATGTTCTTAAAAATTTCGAAAATGGTGAAGAACTCCCTCACTCTGCCTGGGAGACAGACGCAAGAGATACCGTGAATTTGGCTAAATCCGAACTTTGTTCATCTTTTATCCACCACCCGTTTGCAGATCACACACTGAAACCTTCCTCACTTTGCTCCTCCAATGGCGTTTTCCTCTTTCCCCAATTATCGCTTTGCCTTCGCCCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTTATCTTCTTCACCAAACGAAACGCCGACGTTTCCCTCTTTCTCTACCAAGATCTCTCCTCCCAAACCCCATTTACTGTCTATCTTGCTCCTCCTCCTTCAATAGCCGAAACCCAGATTTCTTTTCCCGATTCTGGGTCTGATTCTTCTGGCATTGAATCCTTAACGAACCCATCTGCTCAAGAAACAGAGTTTTCTAATGATCAAATTGAGGATCGGCTCTCTGTTAATGGCGAAAATGGCTCGGTTTCTGATGGTGATGTTGCTGTTGGTTCTATGAGGGCTGATGATGGTCCGGATTTGTCAGTGGAGGGGCTGCAGCAATGTGATCTTTACATGGGAAGCTGGGTTAAAGATGAGGAACATTATCCGGTTTATCGAGTGGGTTCTTGCCCCTATGTTGATGAGGCTTATGACTGTGGGAATAATGGGAGAAATGATTCTGAGTATACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTTCCGAGGGAAAAAGTAGCCAAACATCAAAAGAAGAAGCTGAAGGAAAAGCCTTTGGATGGAGGAGGAGTCCAAAGGCGAACATCCACATTATTGAGGCTAACGCAAAACTACCTGAGGAAAGACAACATAGCTAGAACATTCGTCCTTTCCCTATCGGTCAACAGATGTCGGAACCTCCAACAAGGGAGAGGGAAAGCTCTCGTAATGAGAGGATTGAAGCCACCGATTGATTCCTCAAAGAAGACAACTGATATAACTAGGGAAGCTTGA

Coding sequence (CDS)

ATGGCGTTTTCCTCTTTCCCCAATTATCGCTTTGCCTTCGCCCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTTATCTTCTTCACCAAACGAAACGCCGACGTTTCCCTCTTTCTCTACCAAGATCTCTCCTCCCAAACCCCATTTACTGTCTATCTTGCTCCTCCTCCTTCAATAGCCGAAACCCAGATTTCTTTTCCCGATTCTGGGTCTGATTCTTCTGGCATTGAATCCTTAACGAACCCATCTGCTCAAGAAACAGAGTTTTCTAATGATCAAATTGAGGATCGGCTCTCTGTTAATGGCGAAAATGGCTCGGTTTCTGATGGTGATGTTGCTGTTGGTTCTATGAGGGCTGATGATGGTCCGGATTTGTCAGTGGAGGGGCTGCAGCAATGTGATCTTTACATGGGAAGCTGGGTTAAAGATGAGGAACATTATCCGGTTTATCGAGTGGGTTCTTGCCCCTATGTTGATGAGGCTTATGACTGTGGGAATAATGGGAGAAATGATTCTGAGTATACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTTCCGAGGGAAAAAGTAGCCAAACATCAAAAGAAGAAGCTGAAGGAAAAGCCTTTGGATGGAGGAGGAGTCCAAAGGCGAACATCCACATTATTGAGGCTAACGCAAAACTACCTGAGGAAAGACAACATAGCTAGAACATTCGTCCTTTCCCTATCGGTCAACAGATGTCGGAACCTCCAACAAGGGAGAGGGAAAGCTCTCGTAATGAGAGGATTGAAGCCACCGATTGATTCCTCAAAGAAGACAACTGATATAACTAGGGAAGCTTGA

Protein sequence

MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIAETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCDLPREKVAKHQKKKLKEKPLDGGGVQRRTSTLLRLTQNYLRKDNIARTFVLSLSVNRCRNLQQGRGKALVMRGLKPPIDSSKKTTDITREA
Homology
[Close]
BLAST of Carg19812 vs. NCBI nr
Match: XP_023545457.1 (protein trichome birefringence-like 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100
Identity = 183/188 (97.34%), Postives = 185/188 (98.40%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 60
           MAFSS PNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTV LAPPPSIA
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVSLAPPPSIA 60

Query: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120
           ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSM+ D
Sbjct: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMKVD 120

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           DGPDLSVEGL+QCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPR 189
           PYGCDLPR
Sbjct: 181 PYGCDLPR 188

[Close]
BLAST of Carg19812 vs. NCBI nr
Match: XP_022929595.1 (protein trichome birefringence-like 5 [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 180/188 (95.74%), Postives = 181/188 (96.28%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 60
           MAFSS PNYRFAFAPIFFLLFLCSFIFFTKRNADVS  LYQDLSSQTPFTV LAPPP IA
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSFSLYQDLSSQTPFTVSLAPPPLIA 60

Query: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120
           E QISFPDSGSDSSGIESL NPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD
Sbjct: 61  EPQISFPDSGSDSSGIESLANPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           DGPDLSVEGL+QCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPR 189
           PYGCDLPR
Sbjct: 181 PYGCDLPR 188

[Close]
BLAST of Carg19812 vs. NCBI nr
Match: XP_022997343.1 (protein trichome birefringence-like 5 [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 5.9e-97
Identity = 179/188 (95.21%), Postives = 181/188 (96.28%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 60
           MAFSS PNYRFAFAPIFFLLFLCSFIFFTKRNADVS  LYQDLS+QTPFTV LAPPP IA
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSFSLYQDLSTQTPFTVSLAPPPLIA 60

Query: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120
           E QISFPDSGS SSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD
Sbjct: 61  EPQISFPDSGSGSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           DGPDLSVEGL+QCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPR 189
           PYGCDLPR
Sbjct: 181 PYGCDLPR 188

[Close]
BLAST of Carg19812 vs. NCBI nr
Match: XP_008450807.1 (PREDICTED: protein trichome birefringence-like 5 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPP--PS 60
           MAFSS PNYRF FAPIFFLLFLCSFIFFTKRNADVSL LYQDLSSQ+PFTV LAPP   S
Sbjct: 1   MAFSSLPNYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLAPPXXXS 60

Query: 61  IAETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMR 120
           ++E QISFPDSGS SS IESLTNPSAQETE SN QIE++LSVNGENGSV  G VA  S+ 
Sbjct: 61  VSEPQISFPDSGSGSSDIESLTNPSAQETETSNHQIENKLSVNGENGSVPHG-VAAASIV 120

Query: 121 ADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWR 180
           ADDGPDLS+EGL+QCDLYMG+WVKDEEHYP+Y+VGSCPYVDEAYDCGNNGR DSEYTKWR
Sbjct: 121 ADDGPDLSMEGLKQCDLYMGTWVKDEEHYPIYKVGSCPYVDEAYDCGNNGRADSEYTKWR 180

Query: 181 WKPYGCDLPR 189
           WKPYGCDLPR
Sbjct: 181 WKPYGCDLPR 189

[Close]
BLAST of Carg19812 vs. NCBI nr
Match: XP_004150389.1 (PREDICTED: protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 hypothetical protein Csa_2G062660 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 5.0e-80
Identity = 157/188 (83.51%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 60
           MAFSS P+YRF FAPIFFLLFLCSFIFFTKRNADVSL LYQDLSSQ+PFTV LA  PSI+
Sbjct: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLA-SPSIS 60

Query: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120
           E QISFP SGSDSS IESLTN SA +TE SNDQIE++LSVN ENGSVSDG  A  SM AD
Sbjct: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQ-AAASMVAD 120

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           D PDLS++GL+QCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180

Query: 181 PYGCDLPR 189
           PYGCDLPR
Sbjct: 181 PYGCDLPR 186

[Close]
BLAST of Carg19812 vs. TAIR10
Match: AT5G20590.1 (TRICHOME BIREFRINGENCE-LIKE 5)

HSP 1 Score: 121.3 bits (303), Expect = 9.2e-28
Identity = 76/200 (38.00%), Postives = 103/200 (51.50%), Query Frame = 0 

Query: 4   SSFPNYRFAF---APIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 63
           SSFP    ++     +F ++FLCS  FFT+R  + SL  Y   ++  P      PPP+  
Sbjct: 5   SSFPRTIVSYTVTTSLFIVIFLCSVFFFTRRTLEPSLSPYH--TADIPLPAVDLPPPTPL 64

Query: 64  ETQISFPDSGSDSSGIESLTNPS------------AQETEFSNDQIEDRLSVNGENGSVS 123
             QI  P  G     +   TNP             A ETE     +ED  +   E     
Sbjct: 65  LPQIE-PHDGD----VTVETNPKEVEDSRRGGDDVAVETELKLKDVEDSHTEKTEEEEEG 124

Query: 124 DGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNG 183
            G+ + G +  +      +E ++ CDLY GSWVK ++ YP+Y+ GSCPYVD+A+DC  NG
Sbjct: 125 RGE-SPGEVSVESVEHAVIEKMRGCDLYKGSWVKGDDEYPLYQPGSCPYVDDAFDCQRNG 184

Query: 184 RNDSEYTKWRWKPYGCDLPR 189
           R DS+Y  WRWKP GCDLPR
Sbjct: 185 RRDSDYLNWRWKPDGCDLPR 196

[Close]
BLAST of Carg19812 vs. TAIR10
Match: AT1G60790.1 (Plant protein of unknown function (DUF828))

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-17
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0 

Query: 103 ENGSVSDGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVK-DEEHYPVYRVGSCPYVDEA 162
           ENGSV++              D S    + CD+Y GSWV+ D+E  P Y  GSCPY+D  
Sbjct: 174 ENGSVTE--------------DRSRGSYEDCDIYDGSWVRADDETMPYYPPGSCPYIDRD 233

Query: 163 YDCGNNGRNDSEYTKWRWKPYGCDLPR 189
           ++C  NGR D  Y KWRW+P GCD+PR
Sbjct: 234 FNCHANGRPDDAYVKWRWQPNGCDIPR 246

[Close]
BLAST of Carg19812 vs. TAIR10
Match: AT2G30900.1 (TRICHOME BIREFRINGENCE-LIKE 43)

HSP 1 Score: 78.2 bits (191), Expect = 8.9e-15
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           +G  L +   + C++Y GSWV D+  YP+Y   +CP+++  ++C +NGR DSEY K+RW+
Sbjct: 31  NGSSLGLPPRKFCNIYQGSWVYDKS-YPLYDSKNCPFIERQFNCKSNGRPDSEYLKYRWQ 90

Query: 181 PYGCDLPR 189
           P GC+LPR
Sbjct: 91  PSGCNLPR 97

[Close]
BLAST of Carg19812 vs. TAIR10
Match: AT1G48880.1 (TRICHOME BIREFRINGENCE-LIKE 7)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 126 SVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCD 185
           SV G  +CD++ G+WV D ++YP+Y    CP+V++ ++C  NGR   EY KWRWKP  C 
Sbjct: 108 SVVGDTECDIFDGNWVVD-DNYPLYNASECPFVEKGFNCLGNGRGHDEYLKWRWKPKHCT 167

Query: 186 LPREKVAKHQKKKLKEK 203
           +PR +V +   K+L+ K
Sbjct: 168 VPRFEV-RDVLKRLRGK 182

[Close]
BLAST of Carg19812 vs. TAIR10
Match: AT3G12060.1 (Plant protein of unknown function (DUF828))

HSP 1 Score: 74.7 bits (182), Expect = 9.9e-14
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 127 VEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCDL 186
           +E L+ C+ + G WVKD+  YP+Y+ GSC  +DE ++C +NGR D ++ K +WKP  C L
Sbjct: 190 IESLKSCEFFEGDWVKDDS-YPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSL 249

Query: 187 PR 189
           PR
Sbjct: 250 PR 250

[Close]
BLAST of Carg19812 vs. Swiss-Prot
Match: sp|F4K5K4|TBL5_ARATH (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 76/200 (38.00%), Postives = 103/200 (51.50%), Query Frame = 0 

Query: 4   SSFPNYRFAF---APIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 63
           SSFP    ++     +F ++FLCS  FFT+R  + SL  Y   ++  P      PPP+  
Sbjct: 5   SSFPRTIVSYTVTTSLFIVIFLCSVFFFTRRTLEPSLSPYH--TADIPLPAVDLPPPTPL 64

Query: 64  ETQISFPDSGSDSSGIESLTNPS------------AQETEFSNDQIEDRLSVNGENGSVS 123
             QI  P  G     +   TNP             A ETE     +ED  +   E     
Sbjct: 65  LPQIE-PHDGD----VTVETNPKEVEDSRRGGDDVAVETELKLKDVEDSHTEKTEEEEEG 124

Query: 124 DGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNG 183
            G+ + G +  +      +E ++ CDLY GSWVK ++ YP+Y+ GSCPYVD+A+DC  NG
Sbjct: 125 RGE-SPGEVSVESVEHAVIEKMRGCDLYKGSWVKGDDEYPLYQPGSCPYVDDAFDCQRNG 184

Query: 184 RNDSEYTKWRWKPYGCDLPR 189
           R DS+Y  WRWKP GCDLPR
Sbjct: 185 RRDSDYLNWRWKPDGCDLPR 196

[Close]
BLAST of Carg19812 vs. Swiss-Prot
Match: sp|Q8VYR3|TBL2_ARATH (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.7e-16
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0 

Query: 103 ENGSVSDGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVK-DEEHYPVYRVGSCPYVDEA 162
           ENGSV++              D S    + CD+Y GSWV+ D+E  P Y  GSCPY+D  
Sbjct: 174 ENGSVTE--------------DRSRGSYEDCDIYDGSWVRADDETMPYYPPGSCPYIDRD 233

Query: 163 YDCGNNGRNDSEYTKWRWKPYGCDLPR 189
           ++C  NGR D  Y KWRW+P GCD+PR
Sbjct: 234 FNCHANGRPDDAYVKWRWQPNGCDIPR 246

[Close]
BLAST of Carg19812 vs. Swiss-Prot
Match: sp|Q6DR10|TBL43_ARATH (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-13
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           +G  L +   + C++Y GSWV D+  YP+Y   +CP+++  ++C +NGR DSEY K+RW+
Sbjct: 31  NGSSLGLPPRKFCNIYQGSWVYDKS-YPLYDSKNCPFIERQFNCKSNGRPDSEYLKYRWQ 90

Query: 181 PYGCDLPR 189
           P GC+LPR
Sbjct: 91  PSGCNLPR 97

[Close]
BLAST of Carg19812 vs. Swiss-Prot
Match: sp|F4I037|TBL7_ARATH (Protein trichome berefringence-like 7 OS=Arabidopsis thaliana OX=3702 GN=TBL7 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-13
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 126 SVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCD 185
           SV G  +CD++ G+WV D ++YP+Y    CP+V++ ++C  NGR   EY KWRWKP  C 
Sbjct: 108 SVVGDTECDIFDGNWVVD-DNYPLYNASECPFVEKGFNCLGNGRGHDEYLKWRWKPKHCT 167

Query: 186 LPREKVAKHQKKKLKEK 203
           +PR +V +   K+L+ K
Sbjct: 168 VPRFEV-RDVLKRLRGK 182

[Close]
BLAST of Carg19812 vs. Swiss-Prot
Match: sp|Q9LHL6|TBL1_ARATH (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 127 VEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCDL 186
           +E L+ C+ + G WVKD+  YP+Y+ GSC  +DE ++C +NGR D ++ K +WKP  C L
Sbjct: 190 IESLKSCEFFEGDWVKDDS-YPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSL 249

Query: 187 PR 189
           PR
Sbjct: 250 PR 250

[Close]
BLAST of Carg19812 vs. TrEMBL
Match: tr|A0A1S3BPH3|A0A1S3BPH3_CUCME (protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83
Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPP--PS 60
           MAFSS PNYRF FAPIFFLLFLCSFIFFTKRNADVSL LYQDLSSQ+PFTV LAPP   S
Sbjct: 1   MAFSSLPNYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLAPPXXXS 60

Query: 61  IAETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMR 120
           ++E QISFPDSGS SS IESLTNPSAQETE SN QIE++LSVNGENGSV  G VA  S+ 
Sbjct: 61  VSEPQISFPDSGSGSSDIESLTNPSAQETETSNHQIENKLSVNGENGSVPHG-VAAASIV 120

Query: 121 ADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWR 180
           ADDGPDLS+EGL+QCDLYMG+WVKDEEHYP+Y+VGSCPYVDEAYDCGNNGR DSEYTKWR
Sbjct: 121 ADDGPDLSMEGLKQCDLYMGTWVKDEEHYPIYKVGSCPYVDEAYDCGNNGRADSEYTKWR 180

Query: 181 WKPYGCDLPR 189
           WKPYGCDLPR
Sbjct: 181 WKPYGCDLPR 189

[Close]
BLAST of Carg19812 vs. TrEMBL
Match: tr|A0A0A0LMI5|A0A0A0LMI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.3e-80
Identity = 157/188 (83.51%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 1   MAFSSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 60
           MAFSS P+YRF FAPIFFLLFLCSFIFFTKRNADVSL LYQDLSSQ+PFTV LA  PSI+
Sbjct: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLA-SPSIS 60

Query: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120
           E QISFP SGSDSS IESLTN SA +TE SNDQIE++LSVN ENGSVSDG  A  SM AD
Sbjct: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQ-AAASMVAD 120

Query: 121 DGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180
           D PDLS++GL+QCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180

Query: 181 PYGCDLPR 189
           PYGCDLPR
Sbjct: 181 PYGCDLPR 186

[Close]
BLAST of Carg19812 vs. TrEMBL
Match: tr|A0A2I4GIK7|A0A2I4GIK7_9ROSI (protein trichome birefringence-like 5 isoform X1 OS=Juglans regia OX=51240 GN=LOC109008178 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.5e-29
Identity = 77/164 (46.95%), Postives = 103/164 (62.80%), Query Frame = 0 

Query: 28  FTKRNADVSLFLYQDLSSQ-TPFTVYLAPPPS--IAETQISFPDSGSDSSGIESLTNPSA 87
           F+KR  + +LFLY+DL SQ  PF+  L    S   +++ +S        S    L  P++
Sbjct: 38  FSKRAVEPTLFLYRDLFSQPPPFSSSLTNSSSSFSSDSTLSIAPPEPAHSPTHPLVPPNS 97

Query: 88  QETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVKDE 147
           Q   F +  I D LSV  E   V D +     +  D+G DLS+EG+++C+ YMG+WVKD 
Sbjct: 98  QNNSFRS--ISDELSVQDETDPVQDNESF--GVTDDNGGDLSMEGVKECNFYMGTWVKD- 157

Query: 148 EHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWKPYGCDLPR 189
           E YP+Y+ GSCPYVDEA+DC +NGR DS+Y KWRWKP GCDLPR
Sbjct: 158 EGYPIYKQGSCPYVDEAFDCQSNGRGDSDYLKWRWKPDGCDLPR 196

[Close]
BLAST of Carg19812 vs. TrEMBL
Match: tr|A0A2K1X0B6|A0A2K1X0B6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G133000v3 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 81/208 (38.94%), Postives = 103/208 (49.52%), Query Frame = 0 

Query: 4   SSFPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIAETQ 63
           SSF N       IF + FL +   F KR  + SL  Y+D   Q   T  L   P+     
Sbjct: 5   SSFNNRNAVITSIFLVSFLLTVFLFNKRALEPSLSFYRDFFPQRA-TASLTSSPNFTLPD 64

Query: 64  ISFP-DSG-----SDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGS----------- 123
              P DS      S +  IES T   + + E S +  +D    + E+G            
Sbjct: 65  SEQPVDSATNQPVSRNETIESKTGDDSTKVEVSAENEKDNPDGDFESGGGXXXXXXXXXX 124

Query: 124 ------VSDGDVAVGSMRADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDE 183
                   DG++  G+    +  D  +  L+ CDLYMG+WVKDEE YP+Y  GSCPYVDE
Sbjct: 125 XXXXXXXXDGNLETGADLDGNDDDKLMASLKSCDLYMGTWVKDEE-YPIYEAGSCPYVDE 184

Query: 184 AYDCGNNGRNDSEYTKWRWKPYGCDLPR 189
           A+DC  NGR DS+Y KWRWKPY CDLPR
Sbjct: 185 AFDCQGNGRKDSDYLKWRWKPYDCDLPR 210

[Close]
BLAST of Carg19812 vs. TrEMBL
Match: tr|A0A178USI5|A0A178USI5_ARATH (TBL5 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g20550 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 74/195 (37.95%), Postives = 105/195 (53.85%), Query Frame = 0 

Query: 4   SSFPNYRFAF---APIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVYLAPPPSIA 63
           SSFP    ++     +F ++FLCS  FFT+R  + SL  Y   ++  P +    PPP+  
Sbjct: 5   SSFPRTIVSYTVTTSLFIVIFLCSVFFFTRRTLEPSLSPYH--TADIPLSAVDLPPPTPL 64

Query: 64  ETQISFPDSG----SDSSGIESLT---NPSAQETEFSNDQIEDRLSVNGENGSVSDGDVA 123
             QI   D      ++   +E      +  A ETE     +ED  +   E      G+ +
Sbjct: 65  LPQIEPHDGDVTVETNQKEVEDSRRGGDDVAVETELKLKDVEDSHTEKTEEEEEGRGE-S 124

Query: 124 VGSMRADDGPDLSVEGLQQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSE 183
            G +  +      +E ++ CDLY GSWVKD++ YP+Y+ GSCPYVD+A+DC  NGR DS+
Sbjct: 125 PGEVSVESVEHAVIEKMRGCDLYRGSWVKDDDEYPLYQPGSCPYVDDAFDCQRNGRRDSD 184

Query: 184 YTKWRWKPYGCDLPR 189
           Y  WRWKP GCDLPR
Sbjct: 185 YLNWRWKPDGCDLPR 196

The following BLAST results are available for this feature:
BLAST of Carg19812 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023545457.14.3e-10097.34protein trichome birefringence-like 5 [Cucurbita pepo subsp. pepo][more]
XP_022929595.11.5e-9795.74protein trichome birefringence-like 5 [Cucurbita moschata][more]
XP_022997343.15.9e-9795.21protein trichome birefringence-like 5 [Cucurbita maxima][more]
XP_008450807.12.8e-8384.21PREDICTED: protein trichome birefringence-like 5 [Cucumis melo][more]
XP_004150389.15.0e-8083.51PREDICTED: protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 h... [more]
BLAST of Carg19812 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20590.19.2e-2838.00TRICHOME BIREFRINGENCE-LIKE 5[more]
AT1G60790.14.3e-1745.98Plant protein of unknown function (DUF828)[more]
AT2G30900.18.9e-1545.59TRICHOME BIREFRINGENCE-LIKE 43[more]
AT1G48880.12.0e-1444.16TRICHOME BIREFRINGENCE-LIKE 7[more]
AT3G12060.19.9e-1446.77Plant protein of unknown function (DUF828)[more]
BLAST of Carg19812 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4K5K4|TBL5_ARATH1.7e-2638.00Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE... [more]
sp|Q8VYR3|TBL2_ARATH7.7e-1645.98Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE... [more]
sp|Q6DR10|TBL43_ARATH1.6e-1345.59Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 ... [more]
sp|F4I037|TBL7_ARATH3.6e-1344.16Protein trichome berefringence-like 7 OS=Arabidopsis thaliana OX=3702 GN=TBL7 PE... [more]
sp|Q9LHL6|TBL1_ARATH1.8e-1246.77Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE... [more]
BLAST of Carg19812 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BPH3|A0A1S3BPH3_CUCME1.9e-8384.21protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE... [more]
tr|A0A0A0LMI5|A0A0A0LMI5_CUCSA3.3e-8083.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=4 SV=1[more]
tr|A0A2I4GIK7|A0A2I4GIK7_9ROSI3.5e-2946.95protein trichome birefringence-like 5 isoform X1 OS=Juglans regia OX=51240 GN=LO... [more]
tr|A0A2K1X0B6|A0A2K1X0B6_POPTR1.2e-2438.94Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G133000v3 PE=... [more]
tr|A0A178USI5|A0A178USI5_ARATH1.5e-2437.95TBL5 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g20550 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029970TBL5
IPR029962TBL
IPR025846PMR5_N_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19812-RACarg19812-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025846PMR5 N-terminal domainPFAMPF14416PMR5Ncoord: 131..185
e-value: 8.3E-19
score: 67.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..125
IPR029962Trichome birefringence-like familyPANTHERPTHR32285FAMILY NOT NAMEDcoord: 12..203
IPR029970Protein trichome birefringence-like 5PANTHERPTHR32285:SF8PROTEIN TRICHOME BIREFRINGENCE-LIKE 5coord: 12..203

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19812Carg22679Silver-seed gourdcarcarB004
The following block(s) are covering this gene:

None