Carg19790 (gene) Silver-seed gourd

NameCarg19790
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_143 : 344773 .. 345071 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAGTCAGCCGTTGCGGCGGCGATGGTGGTGGGGCTGCAGCTCAACGAAAGTCGTCTCCGATTGAAACGGAGGAAGCCAGGAGAAAGTGACCAGCTCTGACCCTTCACTTATTATTTCTTTCTTTCTCCAATGCCATTTTCAATCCCAACGTTTCCAGGAAGATCTGTTTTTCCTTTTCATTTGAGCTTTAATGGCGTTTCTCTGTCAAATAATAGAAACCCTCTTTCTCTTCCCTCAAAATAGGAACAAAAATAGCGACAATGGCGGTATAGGCTGCGATGTGGCCGAGTGA

mRNA sequence

ATGGAAAAAGTCAGCCGTTGCGGCGGCGATGGTGGTGGGGCTGCAGCTCAACGAAAGTCGTCTCCGATTGAAACGGAGGAAGCCAGGAGAAAGAACAAAAATAGCGACAATGGCGGTATAGGCTGCGATGTGGCCGAGTGA

Coding sequence (CDS)

ATGGAAAAAGTCAGCCGTTGCGGCGGCGATGGTGGTGGGGCTGCAGCTCAACGAAAGTCGTCTCCGATTGAAACGGAGGAAGCCAGGAGAAAGAACAAAAATAGCGACAATGGCGGTATAGGCTGCGATGTGGCCGAGTGA

Protein sequence

MEKVSRCGGDGGGAAAQRKSSPIETEEARRKNKNSDNGGIGCDVAE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19790-RACarg19790-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg19790Cucurbita moschata (Rifu)carcmoB1156
Carg19790Cucurbita pepo (Zucchini)carcpeB1194
Carg19790Cucurbita maxima (Rimu)carcmaB1187