Carg19766 (gene) Silver-seed gourd

Overview
NameCarg19766
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionIntegral membrane protein hemolysin-III-like protein
LocationCucurbita_argyrosperma_scaffold_143 : 201074 .. 204025 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAGAAATCCATAGACTCCAAATTAAGTAATTCTGGGAAGGAATCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGGTCGTAGCTTCCAACTGTACCGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCCAGCAGTGACTTCATTAAAGTTTCTGGTAACAATAAGCCCTCTCCAGTCTTCACAACGAGTCCGCCTCGTCTCGTTTCTTCAACTTCTAATACCACAACTGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGCGCATCTAAAATCCCAGGTCAAGGAGTTACAGGACCATTGCTTCCCTGCATTTGCCCCTTTTACAATGGTGTCTCCCATGAATGCATCCGGTAAACCTTCAGTTCCTCATAAGTATGGCATTAATTTAGCCACAGCAGAATCAGACTTTGATTCTGCAGAATGGAAAAATTTGCAGTGGGAACATAGATATCATCAGTTGGAGTTGTTGTTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGGTATGTTCTTCATTTAAGAAAGTGCTTCATCTTATTCCTGAAATAGTTTGAATGAAACTTATTTACTTAATGAATGATTTTACTTTCTTTTTTTTTATCAGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGGTAGTTTGATATCTGTATTACCTAACTTCACTTTCCTTTTCTGTGATCCTGGGAAAACTATTATAGTCTGCAAAATGAGTTGTTGACAAAATGTTATGTTTGATTCAATTATTTTTGTTCATTGCGGTCTTGTGTGTTTCCATATTACTTTGAACTTTTGACTTTCCATGATGATTTTTCTTCTTTGGGCTGAAGAAGTCTTGGATGTGGACAGGATAATTTTTAATATGTTAGTTGAAACCTTATCCCTCCTTATCTTAAGCTTCCTCTATGTTGGATTTCGACTTGCAAGCCTAGAAAGAAAGAAGTATATTGTAACAGCTCAAGCTCACCGCTAGTAGATATTGTTCTCTTTGGGCTTTTCTTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCATCTGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATTCACCCCCCTTCGGGGCCCAACATTCTTGCTGGCACTCATTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACCCTTCTTCGTTGCTCAGTATCCTTGCTGGCATACCACCTCGTGTCCACACCTCTTCGGGGCTTAGCCTCCTCGCTGGCACATCACCCGGTGTCTGGCTCTGATACCATTTGTAACAACTCAAGCCCATTGCTAGCAGATATTGTCTTTTTTGGGCTTTCCCTCAAGATTTTTAAAACGAGTCTGTTAGGGAGAGGTTTCCATACCCTTATAAATAATGCTTTGTTCTCCTCCCCAACCGATGTGGAATCTCAACTGGTAAAAAAAATAACAATGTTCCAAATTTGTTATGAATATTGCTTGGGCACAGAACAGTTGCGCTTATGAACAAGACTGAAATGCTAAAACACATATGGAGAAAGACTTGTCAAGGATCTGATTGGATGAAAAAAGGCATCAGCTTTCCGCGAGCATTTAACATTCCTTATAAAATACCAAAACTTGCCATTAGATGAACGAAGTCTATAGCTAGTCTTTTCCTTGGGTTTTTATTTCAGCCTATTGAGGATGGTTGGGAGAGAGTCCAGTGTTGGCTAATTAAGGGGATGATCATGAGTTTATAAGTAAGGAATATATCTCCATTGGTATGAGGTCTTTTGGAGAAAACCAAAAGTAAAGTCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATCATGGAGGTTCGTGGATCCTAACATGGTATCAGAGTCATGCCCTTAACTTAGCCATGTCAATAAAATCCTCAATTGTCGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTATCAAACAAATGGTGTACTTTGTTCAAGGGCTCCAGAGAAAGGAGTCAAATCTCAATTAAGGGGAGGCTGTTCAAGGGCTCCATAGGCCTCAGGGAAGGCTCTATGGTGCACTTCATTTGAGGGGAGGATTGTTGGGAGAAAATCCCATATTGACTGAGTAAGGTGATGATCATGTGTTTATAAGTAAGGAATACATCTTTATTGGTGTGAGGCCTTTTGGGGAAACCAAAAGTAAAGCCATGAGAGCTTATACTCAAAATGGACAATATCATACTATTGTGGAGGTTCGTGGTTCCTGACTGTGACTTTGTACCAAACATACCTCTTATTTTTTAGTTCCTTCCTAGTTTTGCTTTGGAGCATGATCCAAGTAACATAAAATTCCTCTTTTCTTCATGACAGCGAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAAGTGCCATTGGCTCATCAAGACGGATCAGAGATGTAATCGTATAGACATAACATGTTTTTCTTTTTCAACCTATTGTTCTTCAAGTACGACGAAGATAACGTTCTGGACTGCGATTGCATCGAGTTTGCTCAGAATTCGCCATTCTCAGTCGCCACAAACCAGATGTTTGCTGGTTTCTAGTAATATTCTGCCTACTATTCCTCCTGCTCATAATAGTTCTCACGCGTTTGACAAAGTTTTTAAGAAAAGATTGCTACTGTATGTGACTGTTACCAGGAAGAAAGTGGAAATAGATCCACTTCCGTATAAATGCTTCTTTTTTC

mRNA sequence

ATGGTTCAGAAATCCATAGACTCCAAATTAAGTAATTCTGGGAAGGAATCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGGTCGTAGCTTCCAACTGTACCGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCCAGCAGTGACTTCATTAAAGTTTCTGGTAACAATAAGCCCTCTCCAGTCTTCACAACGAGTCCGCCTCGTCTCGTTTCTTCAACTTCTAATACCACAACTGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGCGCATCTAAAATCCCAGGTCAAGGAGTTACAGGACCATTGCTTCCCTGCATTTGCCCCTTTTACAATGGTGTCTCCCATGAATGCATCCGGTAAACCTTCAGTTCCTCATAAGTATGGCATTAATTTAGCCACAGCAGAATCAGACTTTGATTCTGCAGAATGGAAAAATTTGCAGTGGGAACATAGATATCATCAGTTGGAGTTGTTGTTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGCGAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAAGTGCCATTGGCTCATCAAGACGGATCAGAGATGTAATCGTATAGACATAACATGTTTTTCTTTTTCAACCTATTGTTCTTCAAGTACGACGAAGATAACGTTCTGGACTGCGATTGCATCGAGTTTGCTCAGAATTCGCCATTCTCAGTCGCCACAAACCAGATGTTTGCTGGTTTCTAGTAATATTCTGCCTACTATTCCTCCTGCTCATAATAGTTCTCACGCGTTTGACAAAGTTTTTAAGAAAAGATTGCTACTGTATGTGACTGTTACCAGGAAGAAAGTGGAAATAGATCCACTTCCGTATAAATGCTTCTTTTTTC

Coding sequence (CDS)

ATGGTTCAGAAATCCATAGACTCCAAATTAAGTAATTCTGGGAAGGAATCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGGTCGTAGCTTCCAACTGTACCGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCCAGCAGTGACTTCATTAAAGTTTCTGGTAACAATAAGCCCTCTCCAGTCTTCACAACGAGTCCGCCTCGTCTCGTTTCTTCAACTTCTAATACCACAACTGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGCGCATCTAAAATCCCAGGTCAAGGAGTTACAGGACCATTGCTTCCCTGCATTTGCCCCTTTTACAATGGTGTCTCCCATGAATGCATCCGGTAAACCTTCAGTTCCTCATAAGTATGGCATTAATTTAGCCACAGCAGAATCAGACTTTGATTCTGCAGAATGGAAAAATTTGCAGTGGGAACATAGATATCATCAGTTGGAGTTGTTGTTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGCGAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAAGTGCCATTGGCTCATCAAGACGGATCAGAGATGTAA

Protein sequence

MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKADYQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESDFDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM
Homology
[Close]
BLAST of Carg19766 vs. NCBI nr
Match: XP_022948063.1 (uncharacterized protein LOC111451757 [Cucurbita moschata])

HSP 1 Score: 530.0 bits (1364), Expect = 4.7e-147
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0 

Query: 1   MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS 60
           MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS
Sbjct: 1   MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS 60

Query: 61  SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD 120
           SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD
Sbjct: 61  SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD 120

Query: 121 YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD 180
           YQSKLGQLAET HLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD
Sbjct: 121 YQSKLGQLAETVHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD 180

Query: 181 FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240
           FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS
Sbjct: 181 FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240

Query: 241 FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM 276
           FEEAKELQRVGVLNVLG PVNNIKVPLAHQDGS+M
Sbjct: 241 FEEAKELQRVGVLNVLGNPVNNIKVPLAHQDGSDM 275

[Close]
BLAST of Carg19766 vs. NCBI nr
Match: XP_023532403.1 (uncharacterized protein LOC111794586 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 1.1e-130
Identity = 246/275 (89.45%), Postives = 257/275 (93.45%), Query Frame = 0 

Query: 1   MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS 60
           MVQKSIDSK+S+SGKE+PAHEKQLQISAKKTALRDLQNDNR+ ASNCTG       RGPS
Sbjct: 1   MVQKSIDSKVSDSGKEAPAHEKQLQISAKKTALRDLQNDNRLAASNCTG-------RGPS 60

Query: 61  SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD 120
           S+FIKVS NNKPSPVFTTSPPRL+SSTSNT  GHLVYIRRKSDADIAKSSPCDSSSIKAD
Sbjct: 61  SEFIKVSSNNKPSPVFTTSPPRLLSSTSNTANGHLVYIRRKSDADIAKSSPCDSSSIKAD 120

Query: 121 YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD 180
           YQSKLGQLAET HLKS VKELQ+HCFPAF+P T+V PMNA+GK SVPHKYGINL TAESD
Sbjct: 121 YQSKLGQLAETVHLKSHVKELQNHCFPAFSPSTVVFPMNANGKSSVPHKYGINLPTAESD 180

Query: 181 FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240
           FDSA WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS
Sbjct: 181 FDSAGWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240

Query: 241 FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM 276
           FEEAKELQRVGVLNVLGTPVNNIK+PLAHQDGSEM
Sbjct: 241 FEEAKELQRVGVLNVLGTPVNNIKLPLAHQDGSEM 268

[Close]
BLAST of Carg19766 vs. NCBI nr
Match: XP_022971074.1 (uncharacterized protein LOC111469853 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 3.1e-130
Identity = 247/275 (89.82%), Postives = 256/275 (93.09%), Query Frame = 0 

Query: 1   MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS 60
           MVQKSIDSKLS+SGKE+PAHE QLQISAKKTALRDLQNDNR+ ASNCTG       RGPS
Sbjct: 1   MVQKSIDSKLSDSGKEAPAHENQLQISAKKTALRDLQNDNRLAASNCTG-------RGPS 60

Query: 61  SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD 120
           S+FI+VS NNKPSPVFTTSPPRL+SSTSNTT GHLVYIRRKSDADIAKSSPCDSSSIKAD
Sbjct: 61  SEFIEVSSNNKPSPVFTTSPPRLLSSTSNTTNGHLVYIRRKSDADIAKSSPCDSSSIKAD 120

Query: 121 YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD 180
           YQSKLGQLAE  HLKSQVKELQ+HCFPAF+  TMVSPMNA GK SVPHKYGINLATAESD
Sbjct: 121 YQSKLGQLAEAVHLKSQVKELQNHCFPAFSSSTMVSPMNAHGKSSVPHKYGINLATAESD 180

Query: 181 FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240
           FDS+ WKNLQWEHRYHQLELLL KLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS
Sbjct: 181 FDSSGWKNLQWEHRYHQLELLLYKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240

Query: 241 FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM 276
           FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM
Sbjct: 241 FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM 268

[Close]
BLAST of Carg19766 vs. NCBI nr
Match: XP_023532404.1 (uncharacterized protein LOC111794586 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 6.2e-115
Identity = 226/275 (82.18%), Postives = 237/275 (86.18%), Query Frame = 0 

Query: 1   MVQKSIDSKLSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLKERGPS 60
           MVQKSIDSK+S+SGKE+PAHEKQLQISAKKTALRDLQNDNR+ ASNCTG       RGPS
Sbjct: 1   MVQKSIDSKVSDSGKEAPAHEKQLQISAKKTALRDLQNDNRLAASNCTG-------RGPS 60

Query: 61  SDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSIKAD 120
           S+FIKVS NNKPSPVFTTSPPRL+SSTSNT  GHLVYIRRKSDADIAKSSPCDSSSIKAD
Sbjct: 61  SEFIKVSSNNKPSPVFTTSPPRLLSSTSNTANGHLVYIRRKSDADIAKSSPCDSSSIKAD 120

Query: 121 YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATAESD 180
           YQSKLGQLAET HLKS VKELQ+HCFPAF+P T+V PMNA+G                  
Sbjct: 121 YQSKLGQLAETVHLKSHVKELQNHCFPAFSPSTVVFPMNANG------------------ 180

Query: 181 FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240
                WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS
Sbjct: 181 -----WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLS 240

Query: 241 FEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSEM 276
           FEEAKELQRVGVLNVLGTPVNNIK+PLAHQDGSEM
Sbjct: 241 FEEAKELQRVGVLNVLGTPVNNIKLPLAHQDGSEM 245

[Close]
BLAST of Carg19766 vs. NCBI nr
Match: XP_022986425.1 (uncharacterized protein LOC111484175 [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 226/290 (77.93%), Postives = 241/290 (83.10%), Query Frame = 0 

Query: 1   MVQKSIDSKLS-----NSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQKSIDSK S     NSGK+ P+ EKQLQISAKKTALRDLQNDNRV ASNCTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           ERGPSSDFIKVSGNN        +P  L SSTSN + GHLVY+RRKSDADI K+SPCDS+
Sbjct: 61  ERGPSSDFIKVSGNN------PATPSHLHSSTSNASNGHLVYVRRKSDADIGKNSPCDST 120

Query: 121 SIKADYQ--SKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPH---KY 180
           +IK DY   SKLGQLAETAHLKSQVKELQ+HCFPAFAPF MVSPMNASGKPSVPH   KY
Sbjct: 121 NIKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKY 180

Query: 181 GINLATAESDFDSAE------WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVE 240
           GIN  TAES+F  A       WKNLQWE RYHQL+LLLNKL+QSDQQDYLQVLRSLSSVE
Sbjct: 181 GINFTTAESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVE 240

Query: 241 LSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSE 275
           LSRHAVELE+RSI LS EEAKELQRVGVLNVLG PV +IK PL HQ+GSE
Sbjct: 241 LSRHAVELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHQNGSE 284

[Close]
BLAST of Carg19766 vs. TAIR10
Match: AT4G38280.1 (BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1))

HSP 1 Score: 95.1 bits (235), Expect = 7.0e-20
Identity = 72/207 (34.78%), Postives = 97/207 (46.86%), Query Frame = 0 

Query: 58  GPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSSSI 117
           G S D  K +  +  S +    PP    +T+N  +G LVY+RR+ + D +          
Sbjct: 6   GTSKDSEKANEQDSVSSIGAKKPPLESPATTNAASGRLVYVRRRVEVDTSXXXXXXXXXX 65

Query: 118 KADYQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPHKYGINLATA 177
               ++                 LQ    PA  P                HK        
Sbjct: 66  XXXTKA----------------PLQIPSSPAQEP------------TPTSHK-------- 125

Query: 178 ESDFDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSI 237
                      L WE RY  L++LLNKLNQSD+ D++Q+L SLSS ELS+HAV+LEKRSI
Sbjct: 126 -----------LDWEERYLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHAVDLEKRSI 165

Query: 238 HLSFEEAKELQRVGVLNVLGTPVNNIK 265
             S EEA+E+QRV  LN+LG  VN++K
Sbjct: 186 QFSLEEAREMQRVAALNMLGRSVNSLK 165

[Close]
BLAST of Carg19766 vs. TAIR10
Match: AT2G45250.2 (Integral membrane protein hemolysin-III homolog)

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-13
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 189 LQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLSFEE 244
           L WE RY  L++LLNKLNQSD+ D++Q+L SLSS ELS+HAV+LEKRSI  S EE
Sbjct: 124 LDWEERYLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHAVDLEKRSIQFSLEE 178

[Close]
BLAST of Carg19766 vs. TrEMBL
Match: tr|A0A0A0KAB4|A0A0A0KAB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118870 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.3e-84
Identity = 186/287 (64.81%), Postives = 211/287 (73.52%), Query Frame = 0 

Query: 1   MVQKSIDSKLS-----NSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQKSIDSK S     N GK+ P+ EKQLQISAKKTA RDLQNDN  +ASNCTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNFGKDVPSQEKQLQISAKKTASRDLQNDNMAIASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           E G  SD IKVSGN +  PV+  SP  L SSTSN+  GHLVY+RRKSDADI K+S CD++
Sbjct: 61  EIGTGSDIIKVSGNKRALPVYPASPSHLHSSTSNSANGHLVYVRRKSDADIGKNSSCDNT 120

Query: 121 SIKADYQ--SKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPH---KY 180
           SIKA+Y   +KLG LA T HLKSQ KELQ+HC  AFAPF MVS +NA  KPSVPH   K 
Sbjct: 121 SIKANYPNLNKLGSLAVTVHLKSQAKELQNHCVQAFAPFPMVSSVNAPRKPSVPHHMGKC 180

Query: 181 GINLATAESDFDSAE-----------WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRS 240
           GINLA AES+F SA            WKNLQWE RYHQL+LLLNKL+QSDQ+DYLQVL S
Sbjct: 181 GINLAVAESNFHSAPSTFPSVGIPVGWKNLQWEDRYHQLQLLLNKLDQSDQRDYLQVLGS 240

Query: 241 LSSVELSRHAVELEKRSIHLSF-EEAKELQRVGVLNVLGTPVNNIKV 266
           LSSVELSRHAVELEKRSI LS  EE  +L    +  +    +N++K+
Sbjct: 241 LSSVELSRHAVELEKRSIQLSLEEEVLDLDISNIQRLDNLVINSLKI 287

[Close]
BLAST of Carg19766 vs. TrEMBL
Match: tr|A0A2P5DYX9|A0A2P5DYX9_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_237980 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66
Identity = 154/289 (53.29%), Postives = 193/289 (66.78%), Query Frame = 0 

Query: 1   MVQKSIDSK-----LSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQ++IDSK     + NS  + P  +KQL ++ KKT LRDLQNDNR+ A N TG+ PLLK
Sbjct: 1   MVQQTIDSKFREYGMGNSETDLPTGDKQLPVAVKKTVLRDLQNDNRIRAPNSTGNPPLLK 60

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           +RGP ++ IK+SG  + SP    SP +  S  +N+T GHLVY+RRKS+A++ KSS CDS+
Sbjct: 61  DRGPFTNTIKLSGTKRASPECPESPSQHRSPNNNSTNGHLVYVRRKSEAELGKSSTCDST 120

Query: 121 SIKAD--YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPS--VPHKYG 180
           +  A      +LGQ  ET     Q+KE +  CFPAF+P  M S M +SGKPS  +P K G
Sbjct: 121 NTNAYCLQSRQLGQQQETRQPIPQIKEPKVSCFPAFSPLPMTSSMISSGKPSFPLPQKSG 180

Query: 181 INLATAESDFDSAE----------WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLS 240
           + LA+AES                 +N +WE RY+ L+ LL KL+QS Q DYL +LR+LS
Sbjct: 181 LQLASAESSDPLVSVSPSSGSLKALRNRRWEMRYNLLQSLLQKLDQSQQDDYLHMLRTLS 240

Query: 241 SVELSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKVPLAHQ 271
           SVELSRHAVELEKRSI LS EEAKELQRVGVLNVLG P+ NI  P  HQ
Sbjct: 241 SVELSRHAVELEKRSIQLSLEEAKELQRVGVLNVLGKPLKNIVSPSTHQ 289

[Close]
BLAST of Carg19766 vs. TrEMBL
Match: tr|A0A2N9I8L9|A0A2N9I8L9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48272 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63
Identity = 152/295 (51.53%), Postives = 187/295 (63.39%), Query Frame = 0 

Query: 1   MVQKSIDSKLS-----NSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQ++I+SK S     N+  + P  +KQL +S KKT LRDLQNDNR++  N  G+SPLLK
Sbjct: 1   MVQQTIESKFSEYGMGNTENDLPTRDKQLLVSVKKTVLRDLQNDNRIMVPNSIGNSPLLK 60

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           ++GP SD  KVSG  + SP    SPP   S +SN   GHLVY+RRKS+A++ KSS  DS+
Sbjct: 61  DKGPVSDATKVSGAKRASPERPVSPPHHQSQSSNAANGHLVYVRRKSEAELGKSSTGDSA 120

Query: 121 SIKAD--YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPH---KY 180
           SI +D     +L    ET    SQ KE +   FP FAPF M + +++SGKPS PH   K 
Sbjct: 121 SINSDCLQSRQLDHPDETTQPNSQEKEPKASSFPTFAPFPMAASISSSGKPSDPHLLGKP 180

Query: 181 GINLATAESDF-----------DSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRS 240
           GI  A AES+F           +    KNLQWE RYHQL+ LL KL++SDQ +YLQ    
Sbjct: 181 GIRSAPAESNFHPVASAGPSLSNPKGLKNLQWEERYHQLQALLRKLDESDQDNYLQ---- 240

Query: 241 LSSVELSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSE 275
              +ELSRHAVELEKRSI LS EEAKELQRV  LNVLG  + N K P  +QD  E
Sbjct: 241 ---IELSRHAVELEKRSIQLSLEEAKELQRVAALNVLGKSMKNFKAPSTYQDRLE 288

[Close]
BLAST of Carg19766 vs. TrEMBL
Match: tr|A0A2P5CYY5|A0A2P5CYY5_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_111120 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.7e-63
Identity = 153/301 (50.83%), Postives = 194/301 (64.45%), Query Frame = 0 

Query: 1   MVQKSIDSK-----LSNSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQ++IDSK     + NS  + P   KQL ++ KKT LRDLQNDNR+ A N TG+ PLLK
Sbjct: 1   MVQQTIDSKFREYGMGNSEIDLPTGNKQLSVAVKKTVLRDLQNDNRIRAPNSTGNPPLLK 60

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           +RGP ++ IK+SG  + SP    SP +  S  +N+T GHLVY+RRKS+A++ KSS CDS+
Sbjct: 61  DRGPFTNTIKLSGTKRASPECPESPSQHRSPNNNSTNGHLVYVRRKSEAELGKSSTCDST 120

Query: 121 SIKAD--YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSV--PHKYG 180
           +  A      +LGQ  ET     Q+KE +  CFPAF+P  M S M +SGKPS+  P K G
Sbjct: 121 NTNAYCLQSRQLGQQQETHQPIPQIKEPKVSCFPAFSPLPMTSSMISSGKPSIPLPQKSG 180

Query: 181 INLATAESD--------FDSAEWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSV 240
           + LA+AES            +  +NL+WE +Y+QL+ LL KL+QS Q DY+ +LR+LSS 
Sbjct: 181 MQLASAESSDPLVSVLPSSGSLKENLRWEMQYNQLQSLLQKLDQSRQDDYIHMLRTLSSA 240

Query: 241 ELSRHAVELEKRSIHLSFEE----------AKELQRVGVLNVLGTPVNNIKVPLAHQDGS 275
           ELSRHAVELEKRSI LS EE          AKELQRVGVLNVLG P+ N   P  HQ   
Sbjct: 241 ELSRHAVELEKRSIQLSLEEGSNLLSHVTAAKELQRVGVLNVLGKPLKNTGSPSTHQHQP 300

[Close]
BLAST of Carg19766 vs. TrEMBL
Match: tr|A0A2I4FC00|A0A2I4FC00_9ROSI (uncharacterized protein LOC108997388 isoform X4 OS=Juglans regia OX=51240 GN=LOC108997388 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 154/291 (52.92%), Postives = 192/291 (65.98%), Query Frame = 0 

Query: 1   MVQKSIDSKLSNSGKES-----PAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60
           MVQ++IDSK S  G  S     P  +KQL ++ KKTALRDLQNDNR++  N T +SPLLK
Sbjct: 2   MVQQTIDSKFSEYGMGSTENDLPTRDKQLSVAVKKTALRDLQNDNRIMMPNSTENSPLLK 61

Query: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120
           +R P SD ++VSG  KPS     SPP+  S +SN   GHLVY+RRKS+A++ KSS  DSS
Sbjct: 62  DRNPISDALEVSGAKKPSLECPESPPQYQSPSSNAANGHLVYVRRKSEAELGKSSTGDSS 121

Query: 121 SIKAD--YQSKLGQLAETAHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVP---HKY 180
           SI A+     KL    ET   KSQ+ E +  CFPAFAP  MV+ M++SGKPSVP    K 
Sbjct: 122 SINAECLQSRKLNHQEETTRPKSQM-EPKVSCFPAFAPLPMVASMSSSGKPSVPCNLGKP 181

Query: 181 GINLATAE-SDFDSAEWKNL------QWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSV 240
           G+ LA  E ++   A    L       WE RYHQL++ L KL+++DQ++YLQ+LRS S V
Sbjct: 182 GMALAPVEPNNHHVASAAPLLSNPKGSWEERYHQLKMFLRKLDEADQEEYLQMLRSFSPV 241

Query: 241 ELSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKVPLAHQDGSE 275
           ELSR+AVE+EKRSI LS EEAKELQRV  LNVLG  + + K    HQD  E
Sbjct: 242 ELSRYAVEVEKRSIQLSLEEAKELQRVTALNVLGKCIMDFKAASTHQDRLE 291

The following BLAST results are available for this feature:
BLAST of Carg19766 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948063.14.7e-14798.91uncharacterized protein LOC111451757 [Cucurbita moschata][more]
XP_023532403.11.1e-13089.45uncharacterized protein LOC111794586 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022971074.13.1e-13089.82uncharacterized protein LOC111469853 [Cucurbita maxima][more]
XP_023532404.16.2e-11582.18uncharacterized protein LOC111794586 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022986425.11.9e-11177.93uncharacterized protein LOC111484175 [Cucurbita maxima][more]
BLAST of Carg19766 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38280.17.0e-2034.78BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-... [more]
AT2G45250.24.9e-1367.27Integral membrane protein hemolysin-III homolog[more]
BLAST of Carg19766 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg19766 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KAB4|A0A0A0KAB4_CUCSA1.3e-8464.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118870 PE=4 SV=1[more]
tr|A0A2P5DYX9|A0A2P5DYX9_9ROSA6.0e-6653.29Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_237980 PE=4 S... [more]
tr|A0A2N9I8L9|A0A2N9I8L9_FAGSY2.1e-6351.53Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48272 PE=4 SV=1[more]
tr|A0A2P5CYY5|A0A2P5CYY5_PARAD3.7e-6350.83Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_111120 PE... [more]
tr|A0A2I4FC00|A0A2I4FC00_9ROSI1.8e-6252.92uncharacterized protein LOC108997388 isoform X4 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007049 cell cycle
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0070176 DRM complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19766-RACarg19766-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34555FAMILY NOT NAMEDcoord: 1..271
NoneNo IPR availablePANTHERPTHR34555:SF1INTEGRAL MEMBRANE PROTEIN HEMOLYSIN-III LIKE PROTEINcoord: 1..271

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19766Csa6G118870Cucumber (Chinese Long) v2carcuB0871
Carg19766CSPI06G09710Wild cucumber (PI 183967)carcpiB0891
Carg19766Cucsa.119840Cucumber (Gy14) v1carcgyB0974
Carg19766CmaCh20G007170Cucurbita maxima (Rimu)carcmaB1186
Carg19766CmaCh02G002970Cucurbita maxima (Rimu)carcmaB1187
Carg19766CmoCh02G002920Cucurbita moschata (Rifu)carcmoB1156
Carg19766CmoCh20G007140Cucurbita moschata (Rifu)carcmoB1155
Carg19766Cp4.1LG05g13390Cucurbita pepo (Zucchini)carcpeB1194
Carg19766Cp4.1LG16g03460Cucurbita pepo (Zucchini)carcpeB1190
Carg19766CsGy6G009850Cucumber (Gy14) v2carcgybB0845
Carg19766CsaV3_6G010160Cucumber (Chinese Long) v3carcucB0896
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19766Carg16137Silver-seed gourdcarcarB376
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19766Watermelon (97103) v2carwmbB0890
Carg19766Watermelon (97103) v2carwmbB0891
Carg19766Watermelon (97103) v2carwmbB0892
Carg19766Wax gourdcarwgoB0995
Carg19766Wax gourdcarwgoB0998
Carg19766Silver-seed gourdcarcarB237
Carg19766Silver-seed gourdcarcarB631
Carg19766Cucumber (Gy14) v2carcgybB0846
Carg19766Cucumber (Gy14) v1carcgyB0973
Carg19766Cucurbita maxima (Rimu)carcmaB1181
Carg19766Cucurbita maxima (Rimu)carcmaB1183
Carg19766Cucurbita moschata (Rifu)carcmoB1150
Carg19766Cucurbita moschata (Rifu)carcmoB1152
Carg19766Cucurbita pepo (Zucchini)carcpeB1189
Carg19766Cucurbita pepo (Zucchini)carcpeB1193
Carg19766Cucumber (Chinese Long) v2carcuB0872
Carg19766Bottle gourd (USVL1VR-Ls)carlsiB778
Carg19766Bottle gourd (USVL1VR-Ls)carlsiB779
Carg19766Melon (DHL92) v3.5.1carmeB0843
Carg19766Melon (DHL92) v3.6.1carmedB0854
Carg19766Watermelon (Charleston Gray)carwcgB0827
Carg19766Watermelon (Charleston Gray)carwcgB0828
Carg19766Watermelon (97103) v1carwmB0854
Carg19766Watermelon (97103) v1carwmB0855