Carg19762 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19762
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Phosphoglycerate mutase family protein
Location	Cucurbita_argyrosperma_scaffold_143 : 183099 .. 186677 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGGCGCCTTTTCTACGCAACAAATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGTCTGTGACTATTTGATCTCTTGTTTTATTCTTCGTTTGCTGTTTGGCTTGTTAGAATATGGTGTTTTTCTTGGTTCTTGTCTGATTTTGATTTGCTGTGGAGAATTTCTCAGATTGTTCTTTTGGCCAAAGAATGGTCGGACGGCCAATTGCGTGGTTTTGGATTGCCTTTTCGCGAAATATGTTTCAGAAATTACTGTTTTCTTTTTCTGTTCATGCGTGAAATGAATTGGGATGTTCGTTAATGCTGATTTTATGCTTCAAATTATGATGGATTTCATACTTTTCTGCTTGAATTTGTAGCGTTTCTTATCTGTGCTTGTGATAGGACATGTTCTTGGAGTTTGATTATACATTTTTCTGCTTGAATCTGTAGTGTTTCTTAAGGGTCTGTGCTTGTGATAGGACATGTTCTTGGAGTTTTTGCATGTCGGTTGATTGAGAAGAAGAATGAAGAACAGGCTAATTGACTGAGAGTTTGATTCTACTGTAGGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGTACTTTGTAATGTGTTTTTAGATTTGGGAAGCCTGTCTTTGGTTTGTAAGTTCATGATTTGTTGTCATAAGCAAACGGGCATAACGAATATGAGCCAAACATTTCAGAACAGGATTGTAATTCTTCTGAAAATCTTCACGAGTTAGTGAGTAGTGATGTCAAGAAGATTACAAAAAGGCTTTCCAATTAGCAATAATTTGTTCAAGATCATAGCTACAGAAAAAGAGACCTGACACCAAGAAGAGAGAAAGCTTGATAAGATCCCATAAGACATTAATACTCCTATGGAAGTTCTTTGGTTTCTTTTAAGCCAAATACACAACATGATAGCGACGAGCGAACTGAACCTGTGAAATCCCATATCGGTTGGATAAGGGTGTGGAAATCTCCCCCTAGCAGACGTATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAATGGACAATATCTGCTAGCAGTGGACTTGAGCTGTTACAAATGATATCAGAGCTAGACACTGGGTGGTGTGCCAGCGAAGACGCTGAGCTCCAAAGAGGGGGAGGGACACCGGGTAGTGTGCCAGCGAGAACGTTGGACCTCAAAGGGGGGTGGATTTGTGAGATCTCCACGTCGATTGGAGAGAGGAACGAGTGTCAGCAAGTAGGCCTTGGAGGGGGTGGATTATGAGATCCCACGTCAATTGGAGAGGGAAACGAGTATTAGCCCCAAATGGGGTGAACTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAACATATGCATTTTAAAAACCCTGAGGAGAAGCCCGAAAAAGATAGTCCAAAGAGGACAATATCTGCTAACGGTGGGTTTAGGCTCTTGGCTTGAATGAACTATCATCTCAATCTAATCTGCCTTGTATCTAAGTCGACCGCAATCAGTCGTTGTCATTCTAGCTCAATCTCGATAATGAAAGTAATGATGCATCTTAGATTCACTCGTTTTAATGGAAAATCTATATCACAAGTGCAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCAGTGTAAGGTAAAAGAACTGTTTTCTTTCCATTTGTGCTTCTGTGAAGAGTCTGGTAGACCACTTTTCCGATTCAATATGTTCTTCATCTTCCTCCAACTGATCATTTGCAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAAGTAAGATAACAGCCATTACTTGTTCTTGATTGTGTTTTTGCTGCCATGAAAAGTTACAGTTCAGAATGTTTTGAGTTTTCAATTTCTTGGAAATATTAATGATGCTACCGGGGTTTAAGCCATGGTGGCCACTGAATAAGCACCAATAAGACAAGGAAACTAAGTCATAAGTTTATTATACTTAACAAGTGTTCGAGACGTGTCTAACAATAGGTAGCAAGTGTCCGATACGTGTCCAAAAGTGTGTCCAAGGGTCCAACACATTTTGGACACACATATGCTAGCCAAACTAAAGTCCATGTGCTTCTTAGGAGACCACCTTCTAGGATTTAATATCCTACGAGCTACCTTAGAAACTAAGCGTTGACAAGTAGTGTCAAACGATCGTTCGGTAAGATTAGTCAAGGTGTATACAAGCTACTCGAACACTCACAGATATACGAGAATACAAAATACAGAATTTAGTGGGATGTAGCGTTTTAGTGGATCTGTTAGAGAAGCGGTAAGACTACTCTCATCTTATCTTCCTATTTGATGGAAGGGCTGACTTTTCCAATATCTCGTGGTAAAACATTGTTATTAGAGATTGCGAAGAAATTCACTGAAATCTTTGAATCTTTCATGCCATTTCAGCTGAGGCTTTGTTGATTTTGTGTTGGTTCATCTTAAACAGTATGCAGAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGATTAGCCAAAGCAGTGCTTCAAATGGAGTCTCAATTTCAAGGGTATACCATATTTATATCCTCCTCTATCATAATCCTATCAATCAATCGTGAGATCATATCTCGTGATCTCGAACCAGAGAGAAAAACGAAACATTCTTTGTAAGGGTGTGAAAACCTCTCCTAATATACGCTCTTTAAAAATCTTGAGGGAAAATTCGAAAGGAAAAGTCCAAAGATGATAATATTTGCTAGCGATGGGCTTAGGTTGTTATAGATAATATCAGAATCAGACATTGGGCGATGTGTCCAGCAAGGACGCTGAGTTCCAAAGGGGTAGACACTAGGCTGTGTGCCAGCGAGGACGTTGGACCTTGAAGGAGGTGGATTGTGAGATCCCACATCAATTGAAGAGGGAAACGAAGCATTCTTTATAAGGGTATGAAAATTTTGAGTGGAAGCTCGAACGGAAAATCTCAAAGATGACGATATCTGTTGGTGGTGGGTTTGGACTATTACAAATATGTTCGACTTGGATTAATCGAACACTATCGTCAACCTATACATAGTAAGAAATATTAGAATCTCGATAGATACGACATTGTAGGTTCAAATTTTCATTAACTCAATTATTGGATCTTACGTTTTGCAGTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGTTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCGCCAAGCCCATTCTCGCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGA

mRNA sequence

ATGGCGACGGCGCCTTTTCTACGCAACAAATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCAGTGTAAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAAAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGTTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCGCCAAGCCCATTCTCGCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGA

Coding sequence (CDS)

ATGGCGACGGCGCCTTTTCTACGCAACAAATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCAGTGTAAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAAAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGTTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCGCCAAGCCCATTCTCGCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGA

Protein sequence

MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKELKENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSHDKKSGLLMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQTVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV

Homology

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BLAST of Carg19762 vs. NCBI nr
Match: XP_022948064.1 (uncharacterized protein LOC111451758 isoform X1 [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 4.6e-94
Identity = 183/227 (80.62%), Postives = 194/227 (85.46%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATAPFLRN+YWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL
Sbjct: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENP CKMMKDLRERYFGPSFELLSH
Sbjct: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           DK + +                    +  ++  + L++E   + CAVLVVSHGDPLQIFQ
Sbjct: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           TVMGAAMHENGSGSDELASRLQAAI KPIL+QHRKFALLTGELRAVV
Sbjct: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAVV 227

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BLAST of Carg19762 vs. NCBI nr
Match: XP_022971095.1 (uncharacterized protein LOC111469867 [Cucurbita maxima])

HSP 1 Score: 352.4 bits (903), Expect = 1.0e-93
Identity = 181/227 (79.74%), Postives = 194/227 (85.46%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATAPFLRN+YWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL
Sbjct: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KENSIPLENVRICYSPFSRTIHTAKV ASALNLPFENPQCKMM+DLRERYFGPSFELLSH
Sbjct: 61  KENSIPLENVRICYSPFSRTIHTAKVTASALNLPFENPQCKMMEDLRERYFGPSFELLSH 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           DK + +                    +  ++  + L++E   + CA+LVVSHGDPLQIFQ
Sbjct: 121 DKYAEIWALDEEDPFMRPEGGESVEDVASRLAKAVLQMESQFQGCAILVVSHGDPLQIFQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           TVMGAAMHENGSGSDELASRLQAAI KPIL+QHRKFALLTGELRAVV
Sbjct: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAVV 227

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BLAST of Carg19762 vs. NCBI nr
Match: XP_023532426.1 (uncharacterized protein LOC111794603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 6.6e-93
Identity = 181/227 (79.74%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATAPFLRN+YWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL
Sbjct: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMM+DLRERYFGPSFELLSH
Sbjct: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMEDLRERYFGPSFELLSH 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           DK + +                    +  ++  + L++E   + CAVLVVSHGDPLQIFQ
Sbjct: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           TVMGAA HENGS SDELASRLQAAI KPIL+QHRKFALLTGELRAVV
Sbjct: 181 TVMGAATHENGSSSDELASRLQAAITKPILSQHRKFALLTGELRAVV 227

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BLAST of Carg19762 vs. NCBI nr
Match: XP_022948066.1 (uncharacterized protein LOC111451760 [Cucurbita moschata] >XP_022948067.1 uncharacterized protein LOC111451760 [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 5.1e-85
Identity = 168/227 (74.01%), Postives = 183/227 (80.62%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MA APFLRN+YWILRHGKSIPNEKGLIVSSIENGTLPEYQL SEGV QAQLAGEQFLKEL
Sbjct: 1   MAAAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLVSEGVEQAQLAGEQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KEN IPLENVRICYSPFSRTIHTAK AASALNLPFE+PQCKMM+DLRERYFGPS E LS 
Sbjct: 61  KENCIPLENVRICYSPFSRTIHTAKAAASALNLPFESPQCKMMEDLRERYFGPSLEFLSQ 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
            K   +                    +  ++  + L++E   + CA+LV+SHGDPLQI Q
Sbjct: 121 AKCKEVGAVDEEDPFKRPEGGESVEDVASRLAKTVLQMESQFQGCAILVISHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           TVMGAAM ENGSGSDELASRLQAAI KPIL+QHRKF+LLTGELRAVV
Sbjct: 181 TVMGAAMDENGSGSDELASRLQAAITKPILSQHRKFSLLTGELRAVV 227

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BLAST of Carg19762 vs. NCBI nr
Match: XP_023532766.1 (LOW QUALITY PROTEIN: metal-independent phosphoserine phosphatase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 6.2e-83
Identity = 165/227 (72.69%), Postives = 181/227 (79.74%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MA APFLRN+YWILRHGKSIPNEKGLIVSSIENGTLPEYQL SEGV QAQLAGEQFLKEL
Sbjct: 1   MAAAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLVSEGVEQAQLAGEQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KEN I LENVRICYSPFSRTIHTAKVAASALNLPFE+P CKMM+DLRERYFGPS E LS 
Sbjct: 61  KENCILLENVRICYSPFSRTIHTAKVAASALNLPFESPLCKMMEDLRERYFGPSLEFLSQ 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
            K   +                    +  ++  + L++E   + CA+LV+SHGDPLQI Q
Sbjct: 121 AKCKEVGAVDEEDPFKPPEGGESVEDVASRLAKAVLQMESKFEGCAILVISHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           TVMGAAMHENG+GS +LASRLQA I KPIL+QHRKFALLTGELRAVV
Sbjct: 181 TVMGAAMHENGTGSHDLASRLQAVITKPILSQHRKFALLTGELRAVV 227

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BLAST of Carg19762 vs. TAIR10
Match: AT4G38370.1 (Phosphoglycerate mutase family protein)

HSP 1 Score: 241.1 bits (614), Expect = 6.0e-64
Identity = 121/219 (55.25%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 9   NKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKELKENSIPLE 68
           N+YW+LRHGKSIPNE+GL+VSS+ENG LPEYQLA +GV QA+LAGE FL++LKE++I L+
Sbjct: 10  NRYWVLRHGKSIPNERGLVVSSMENGVLPEYQLAPDGVAQARLAGESFLQQLKESNIELD 69

Query: 69  NVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSHDKKSGL-- 128
            VRICYSPFSRT HTA+V A  LNLPF+ PQCKMM+DLRERYFGP+FEL SHDK   +  
Sbjct: 70  KVRICYSPFSRTTHTARVVAKVLNLPFDAPQCKMMEDLRERYFGPTFELKSHDKYPEIWA 129

Query: 129 ------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQTVMGAAMH 188
                             ++ ++ ++   +E   + CA+LVVSHGDPLQ+ Q V  +A  
Sbjct: 130 LDEKDPFMGPEGGESADDVVSRLATAMKSMEAEYQRCAILVVSHGDPLQMLQNVFHSAKQ 189

Query: 189 ENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           + G G   LA + Q +    +L+QHRKFALLTGELR ++
Sbjct: 190 QEGDG---LAEKFQLSRVASVLSQHRKFALLTGELRPLI 225

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BLAST of Carg19762 vs. TrEMBL
Match: tr|A0A1S3CBK1|A0A1S3CBK1_CUCME (uncharacterized protein LOC103499109 OS=Cucumis melo OX=3656 GN=LOC103499109 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.8e-73
Identity = 148/225 (65.78%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRN+YWILRHGKSIPNEKGLIVSSIENG LPEYQL  EGV QA+LAG QFLKEL
Sbjct: 19  MATASFLRNRYWILRHGKSIPNEKGLIVSSIENGILPEYQLDPEGVEQARLAGIQFLKEL 78

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE+PQCKM+++LRERYFGPSFEL SH
Sbjct: 79  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEDPQCKMIENLRERYFGPSFELSSH 138

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           +K   +                    +  ++  + L++E   + CA+LVVSHGDPLQIFQ
Sbjct: 139 EKYEDIWALDEEDPFKRPEGGESVEDVASRLAQAILEIESLFQGCAILVVSHGDPLQIFQ 198

Query: 181 TVMGAAMHENGS-GSDELASRLQAAIAKPILAQHRKFALLTGELR 205
            +MG+A  ++GS  S++L+S  QA I KP+L+ HR+FALLTGELR
Sbjct: 199 AMMGSAAKQDGSTSSNDLSSIFQALITKPVLSNHRQFALLTGELR 243

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BLAST of Carg19762 vs. TrEMBL
Match: tr|A0A0A0KQV4|A0A0A0KQV4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G265820 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72
Identity = 148/228 (64.91%), Postives = 175/228 (76.75%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRN+YWILRHGKSIPNEKGLIVSS ENG LPEYQLA EGV QA+LAG QFLKEL
Sbjct: 35  MATASFLRNRYWILRHGKSIPNEKGLIVSSTENGILPEYQLAPEGVEQARLAGVQFLKEL 94

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE PQCKM+++LRERYFGPSFELLSH
Sbjct: 95  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEGPQCKMIENLRERYFGPSFELLSH 154

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           DK   +                    +  ++  + L++E   + CA+LVVSHGDPLQI Q
Sbjct: 155 DKYEEIWALDEEDAFKRPEGGESVEDVASRLAKAILEIESLFQGCAILVVSHGDPLQIVQ 214

Query: 181 TVMGAAMHENGS-GSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
            +MG+   ++GS  S++L+S L+A + KPIL+ HR+FALLTGELR ++
Sbjct: 215 AMMGSGGKQDGSTPSNDLSSMLEALMTKPILSNHRQFALLTGELRPLL 262

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BLAST of Carg19762 vs. TrEMBL
Match: tr|A0A2P5DYV5|A0A2P5DYV5_9ROSA (Histidine phosphatase OS=Trema orientalis OX=63057 GN=TorRG33x02_238060 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 6.1e-71
Identity = 138/226 (61.06%), Postives = 167/226 (73.89%), Query Frame = 0


Query: 2   ATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKELK 61
           +T  FLRN+YW+LRHGKSIPNE+GLIVSS+ENGT PEY+LASEGV QAQLAG+ F KEL+
Sbjct: 3   STTSFLRNRYWVLRHGKSIPNERGLIVSSLENGTCPEYELASEGVNQAQLAGQLFQKELE 62

Query: 62  ENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSHD 121
           EN+IPLENVRICYSPFSRT HTAKV AS LN+PFE  QCK+++DLRERYFGPSFEL SHD
Sbjct: 63  ENNIPLENVRICYSPFSRTTHTAKVVASVLNIPFEGAQCKVIEDLRERYFGPSFELKSHD 122

Query: 122 KKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQT 181
           K + +                    ++ ++  +   +E   K C +LVVSHGDPLQI QT
Sbjct: 123 KYAEIWALDEKDPFLRPEGGESVDDVVARLTRAIATIEAQFKGCTILVVSHGDPLQILQT 182

Query: 182 VMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           ++ AA    G   D+L SR+QA    PIL+QHRKFALLTGEL+AV+
Sbjct: 183 ILNAAKQHTGPDCDDLESRIQAVRTPPILSQHRKFALLTGELQAVI 228

[Close]

BLAST of Carg19762 vs. TrEMBL
Match: tr|A0A2P5CYX2|A0A2P5CYX2_PARAD (Histidine phosphatase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_110970 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 138/226 (61.06%), Postives = 167/226 (73.89%), Query Frame = 0


Query: 2   ATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKELK 61
           +T  FLRN YW+LRHGKSIPNEKGLIVSS+ENGT PEY+LASEGV QAQLAG+ F +EL+
Sbjct: 3   STTSFLRNGYWVLRHGKSIPNEKGLIVSSLENGTCPEYELASEGVNQAQLAGQLFQEELE 62

Query: 62  ENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSHD 121
           EN+IPLENVRICYSPFSRT HTAKV AS LN+PFE  QCK+++DLRERYFGPSFEL SHD
Sbjct: 63  ENNIPLENVRICYSPFSRTTHTAKVVASVLNIPFEGAQCKVIEDLRERYFGPSFELKSHD 122

Query: 122 KKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQT 181
           K + +                    ++ ++  +   +E   + C +LVVSHGDPLQI QT
Sbjct: 123 KYAEIWALDEKDPFLRPEGGESVDDVVARLTRAIATIEAQFQGCTILVVSHGDPLQILQT 182

Query: 182 VMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           ++ AA  + G   D+L SR+QA    PIL+QHRKFALLTGELRAV+
Sbjct: 183 ILNAAKQQTGPDCDDLESRIQAVRTPPILSQHRKFALLTGELRAVI 228

[Close]

BLAST of Carg19762 vs. TrEMBL
Match: tr|V4SFC7|V4SFC7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029216mg PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-70
Identity = 142/227 (62.56%), Postives = 166/227 (73.13%), Query Frame = 0


Query: 1   MATAPFLRNKYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT PFLRNKYW+LRHGKSIPNEKGLIVSS+ENGT  EYQLASEGV QA+LAGE FLKEL
Sbjct: 1   MATTPFLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPQCKMMKDLRERYFGPSFELLSH 120
            EN+IPLENVRICYSPFSRT HTA+V AS LNLPFE PQCK+M+DLRER+FGPSFELLSH
Sbjct: 61  NENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH 120

Query: 121 DKKSGL--------------------LMRKIHSSGLKVEKALKICAVLVVSHGDPLQIFQ 180
           DK   +                    ++ ++ ++   +E   + CA+LVVSHGDPLQI Q
Sbjct: 121 DKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAIAKPILAQHRKFALLTGELRAVV 208
           T++ A         D LASR++      IL+QHRK ALLTGELR+VV
Sbjct: 181 TLLNAVKQVTEPNCDNLASRIETVRVHNILSQHRKNALLTGELRSVV 227

The following BLAST results are available for this feature:

BLAST of Carg19762 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948064.1	4.6e-94	80.62	uncharacterized protein LOC111451758 isoform X1 [Cucurbita moschata]	[more]
XP_022971095.1	1.0e-93	79.74	uncharacterized protein LOC111469867 [Cucurbita maxima]	[more]
XP_023532426.1	6.6e-93	79.74	uncharacterized protein LOC111794603 [Cucurbita pepo subsp. pepo]	[more]
XP_022948066.1	5.1e-85	74.01	uncharacterized protein LOC111451760 [Cucurbita moschata] >XP_022948067.1 unchar...	[more]
XP_023532766.1	6.2e-83	72.69	LOW QUALITY PROTEIN: metal-independent phosphoserine phosphatase-like [Cucurbita...	[more]

BLAST of Carg19762 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38370.1	6.0e-64	55.25	Phosphoglycerate mutase family protein	[more]

BLAST of Carg19762 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19762 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBK1\|A0A1S3CBK1_CUCME	3.8e-73	65.78	uncharacterized protein LOC103499109 OS=Cucumis melo OX=3656 GN=LOC103499109 PE=...	[more]
tr\|A0A0A0KQV4\|A0A0A0KQV4_CUCSA	1.1e-72	64.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G265820 PE=4 SV=1	[more]
tr\|A0A2P5DYV5\|A0A2P5DYV5_9ROSA	6.1e-71	61.06	Histidine phosphatase OS=Trema orientalis OX=63057 GN=TorRG33x02_238060 PE=4 SV=...	[more]
tr\|A0A2P5CYX2\|A0A2P5CYX2_PARAD	1.4e-70	61.06	Histidine phosphatase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_110970 PE=4...	[more]
tr\|V4SFC7\|V4SFC7_9ROSI	4.0e-70	62.56	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029216mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029033	His_PPase_superfam
IPR013078	His_Pase_superF_clade-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19762-RA	Carg19762-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013078	Histidine phosphatase superfamily, clade-1	SMART	SM00855	PGAM_5	coord: 10..159 e-value: 0.0047 score: 26.2
IPR013078	Histidine phosphatase superfamily, clade-1	PFAM	PF00300	His_Phos_1	coord: 12..118 e-value: 1.2E-8 score: 34.8
IPR013078	Histidine phosphatase superfamily, clade-1	CDD	cd07067	HP_PGM_like	coord: 12..159 e-value: 1.9077E-10 score: 54.6356
IPR029033	Histidine phosphatase superfamily	GENE3D	G3DSA:3.40.50.1240		coord: 8..175 e-value: 6.6E-15 score: 57.1
IPR029033	Histidine phosphatase superfamily	SUPERFAMILY	SSF53254	Phosphoglycerate mutase-like	coord: 9..161
None	No IPR available	PANTHER	PTHR23029:SF56	PHOSPHOGLYCERATE MUTASE-LIKE PROTEIN	coord: 10..120
None	No IPR available	PANTHER	PTHR23029	PHOSPHOGLYCERATE MUTASE	coord: 10..120
None	No IPR available	PANTHER	PTHR23029:SF56	PHOSPHOGLYCERATE MUTASE-LIKE PROTEIN	coord: 139..183
None	No IPR available	PANTHER	PTHR23029	PHOSPHOGLYCERATE MUTASE	coord: 139..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19762	CmaCh02G002930	Cucurbita maxima (Rimu)	carcmaB1187
Carg19762	CmoCh02G002880	Cucurbita moschata (Rifu)	carcmoB1156
Carg19762	Lsi10G008410	Bottle gourd (USVL1VR-Ls)	carlsiB778
Carg19762	Cla97C02G036150	Watermelon (97103) v2	carwmbB0890

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19762	Silver-seed gourd	carcarB237
Carg19762	Silver-seed gourd	carcarB376
Carg19762	Cucumber (Gy14) v2	carcgybB0845
Carg19762	Cucumber (Gy14) v2	carcgybB0846
Carg19762	Cucumber (Gy14) v1	carcgyB0973
Carg19762	Cucumber (Gy14) v1	carcgyB0974
Carg19762	Cucurbita maxima (Rimu)	carcmaB1181
Carg19762	Cucurbita maxima (Rimu)	carcmaB1183
Carg19762	Cucurbita maxima (Rimu)	carcmaB1186
Carg19762	Cucurbita moschata (Rifu)	carcmoB1150
Carg19762	Cucurbita moschata (Rifu)	carcmoB1152
Carg19762	Cucurbita moschata (Rifu)	carcmoB1155
Carg19762	Cucurbita pepo (Zucchini)	carcpeB1190
Carg19762	Cucurbita pepo (Zucchini)	carcpeB1189
Carg19762	Cucurbita pepo (Zucchini)	carcpeB1193
Carg19762	Cucurbita pepo (Zucchini)	carcpeB1194
Carg19762	Wild cucumber (PI 183967)	carcpiB0891
Carg19762	Cucumber (Chinese Long) v2	carcuB0871
Carg19762	Cucumber (Chinese Long) v2	carcuB0872
Carg19762	Cucumber (Chinese Long) v3	carcucB0896
Carg19762	Bottle gourd (USVL1VR-Ls)	carlsiB779
Carg19762	Melon (DHL92) v3.5.1	carmeB0843
Carg19762	Melon (DHL92) v3.6.1	carmedB0854
Carg19762	Watermelon (Charleston Gray)	carwcgB0827
Carg19762	Watermelon (Charleston Gray)	carwcgB0828
Carg19762	Watermelon (97103) v1	carwmB0854
Carg19762	Watermelon (97103) v1	carwmB0855
Carg19762	Watermelon (97103) v2	carwmbB0891
Carg19762	Watermelon (97103) v2	carwmbB0892
Carg19762	Wax gourd	carwgoB0995
Carg19762	Wax gourd	carwgoB0998