Carg19747 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGCTTAAAATCTCTGCCCATTGTGAATGAGAGCCAGCAGCATTTAGAAGGCAAAAGTTCTGACAAAAAAAACAAGAACATCAATATTGAGCTAGTCCAAAATTCTGCAAATTGGCTTCGGAGCGTACTTGATCTTTCAATCTTCGGTTTCGATGTTGTTGTAAGTAATTCTTCTCTTCTTCTTCTTTGTTTCTATTTGTTATTTATTATTCTTTTTTCCTTCTGGTTTGTGGGAGAGGGTTCGTTTATGTTTCATGTTCATCCAATCAAGGAAGTTGCCGATTGGATCTGTCAAATTCTGATGGTATTTTTTGATGTTTTGGTTCCCTATGCTTTACATACCAGTAGTGTATGCTTTGAGGCAGTAGATCCATCGGGTTTAGTTGGAAGATATGGTTTGTTTTCTGAATTGAAGATTTGGGTGTGGTAATTTTCAGGTTGAAGACAAGAGTGGCGATCATGTAATTGTGGATGTAAATTATCTGCCTTCTTTCAAGGAAGTTCCTGATGACATTGCAATACCTGCTTTCTGGGAAGCCATCAAGAACAAGTATGAAAACTTCAAAAAGGCAAGCCCTTAAGGTGTGTTTCTCTGGATCTTGTGGAGAAATTGCATTTCAAGGTATTATGAATAAGATGTAACTAGTGTTACCTTGTGGGTTATTAATGCTCCGACAGGATTTGGACAGAATTGATTTCAAATTTGGAGGATTTTGAAAGATGAAAATGGTTTCATATTTCTATTTGTGTTTGGAACCAAATTCTGGTTATGTTGCTTTATAACATATATGGAGAAGAAAGTCAAGATACTTCTTTTAGTTTAATTTTGTAAATCAAAGTTCAATACATATTTTTAAAAGATTGAAACTATTGTAATCAATTTAATAAAAAAAAACACTAGCAAAATACAATGGACAGGCATTT ATGGACAGCTTAAAATCTCTGCCCATTGTGAATGAGAGCCAGCAGCATTTAGAAGGCAAAAGTTCTGACAAAAAAAACAAGAACATCAATATTGAGCTAGTCCAAAATTCTGCAAATTGGCTTCGGAGCGTACTTGATCTTTCAATCTTCGGTTTCGATGTTGTTGTTGAAGACAAGAGTGGCGATCATGTAATTGTGGATGTAAATTATCTGCCTTCTTTCAAGGAAGTTCCTGATGACATTGCAATACCTGCTTTCTGGGAAGCCATCAAGAACAAGTATGAAAACTTCAAAAAGGCAAGCCCTTAAGGTGTGTTTCTCTGGATCTTGTGGAGAAATTGCATTTCAAGGTATTATGAATAAGATGTAACTAGTGTTACCTTGTGGGTTATTAATGCTCCGACAGGATTTGGACAGAATTGATTTCAAATTTGGAGGATTTTGAAAGATGAAAATGGTTTCATATTTCTATTTGTGTTTGGAACCAAATTCTGGTTATGTTGCTTTATAACATATATGGAGAAGAAAGTCAAGATACTTCTTTTAGTTTAATTTTGTAAATCAAAGTTCAATACATATTTTTAAAAGATTGAAACTATTGTAATCAATTTAATAAAAAAAAACACTAGCAAAATACAATGGACAGGCATTT ATGGACAGCTTAAAATCTCTGCCCATTGTGAATGAGAGCCAGCAGCATTTAGAAGGCAAAAGTTCTGACAAAAAAAACAAGAACATCAATATTGAGCTAGTCCAAAATTCTGCAAATTGGCTTCGGAGCGTACTTGATCTTTCAATCTTCGGTTTCGATGTTGTTGTTGAAGACAAGAGTGGCGATCATGTAATTGTGGATGTAAATTATCTGCCTTCTTTCAAGGAAGTTCCTGATGACATTGCAATACCTGCTTTCTGGGAAGCCATCAAGAACAAGTATGAAAACTTCAAAAAGGCAAGCCCTTAA MDSLKSLPIVNESQQHLEGKSSDKKNKNINIELVQNSANWLRSVLDLSIFGFDVVVEDKSGDHVIVDVNYLPSFKEVPDDIAIPAFWEAIKNKYENFKKASP
BLAST of Carg19747 vs. NCBI nr
Match: XP_023550840.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg19747 vs. NCBI nr
Match: XP_023550839.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg19747 vs. NCBI nr
Match: XP_023550842.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg19747 vs. NCBI nr
Match: XP_023550841.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg19747 vs. NCBI nr
Match: XP_022928788.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X2 [Cucurbita moschata]) HSP 1 Score: 202.2 bits (513), Expect = 8.4e-49 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg19747 vs. TAIR10
Match: AT2G43980.1 (inositol 1,3,4-trisphosphate 5/6-kinase 4) HSP 1 Score: 114.4 bits (285), Expect = 4.2e-26 Identity = 54/94 (57.45%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Carg19747 vs. Swiss-Prot
Match: sp|O80568|ITPK4_ARATH (Inositol 1,3,4-trisphosphate 5/6-kinase 4 OS=Arabidopsis thaliana OX=3702 GN=ITPK4 PE=1 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 7.5e-25 Identity = 54/94 (57.45%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Carg19747 vs. Swiss-Prot
Match: sp|B8BDK0|ITPK6_ORYSI (Inositol-tetrakisphosphate 1-kinase 6 OS=Oryza sativa subsp. indica OX=39946 GN=ITPK6 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.2e-23 Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of Carg19747 vs. Swiss-Prot
Match: sp|Q0J0B2|ITPK6_ORYSJ (Inositol-tetrakisphosphate 1-kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ITPK6 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.2e-23 Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of Carg19747 vs. Swiss-Prot
Match: sp|Q7SY78|ITPK1_XENLA (Inositol-tetrakisphosphate 1-kinase OS=Xenopus laevis OX=8355 GN=itpk1 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.0e-05 Identity = 16/48 (33.33%), Postives = 33/48 (68.75%), Query Frame = 0
BLAST of Carg19747 vs. Swiss-Prot
Match: sp|Q7ZU91|ITPK1_DANRE (Inositol-tetrakisphosphate 1-kinase OS=Danio rerio OX=7955 GN=itpk1 PE=2 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 15/48 (31.25%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of Carg19747 vs. TrEMBL
Match: tr|A0A0A0K483|A0A0A0K483_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067440 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 8.6e-42 Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Carg19747 vs. TrEMBL
Match: tr|A0A1S3C1D7|A0A1S3C1D7_CUCME (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495365 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40 Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Carg19747 vs. TrEMBL
Match: tr|A0A1S3BZR0|A0A1S3BZR0_CUCME (inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495365 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40 Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Carg19747 vs. TrEMBL
Match: tr|E5GCR3|E5GCR3_CUCME (Inositol-tetrakisphosphate 1-kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40 Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Carg19747 vs. TrEMBL
Match: tr|A0A2N9IND7|A0A2N9IND7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53485 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 9.8e-30 Identity = 65/95 (68.42%), Postives = 80/95 (84.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |