Carg19724 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19724
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Zein-binding protein
Location	Cucurbita_argyrosperma_scaffold_133 : 353874 .. 356913 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTCTTCGCGATTGAACAAGCTTTTGAAACAGAGCAGTGAGTTTAAAAGCTGGTTTCTGGTGTTCGGGTGTTTCCCGCGGGTTTTTATCATTCTAGGGCTTTTTCTGCTGTTTTGGATCAGTTTTAAGATTGTGCAATTTAGTTGGCATTGTGGAGATTGGATGCTATTTCGATGTGATTTTAAGGAGAAATCTGCTAATATAAGAGCTGGAATTTGGTTGAAAACCAGTGTTGTTGAGGTTTGCAATTCCAAAACTGTGCAAACTTGTAGAAGTAGACGATTGAATTGGTTGAAGAAGAATGGATTCTTGTTAAGTAAGATCAATTTAGTAGCAAACCCCAAATGGACTGTGGATTCTGATGGTGATGATAAAAGTGAGGAGAAGGGTGCAGTTTTAGAAGACTATGTTGAGAATGAAGAGAACGAGAACGATTCTGAAGATGGCGAATTCGATGTTGCCAAATTAAGAGAATTGGTGAAGATTGAAAGGAAGCACAAGAAGGAGGCTCTTGAAGAGCTTGAGAAGGAAAGAATCGCAGCTGCTACTTCAGCTGAAGAGGCAATGGCTATGATATTTCGTCTGCAACATGAGAAGAGTGCAATCGAAATCCAAGCGAATCAGTTTCGCAGGATGATGGAGCAAAAGCAACAATATCATCAAGAAGTTATTGAATGTTTGCAAAGAATTATCATGGAATATGAGTCAGAGGGAAGCTTGAGCGAGCAACCATGCATCTGCAGGCCGAAAGAGAAGCTACAACTGATAGGATTCGGTGACGGTACAAGCCTCTTCGAACGTGACATGGAATTCATTCTGGAAGATGATGATGCCCTGATGAACAACATCGGCATGGACCTCGAGGAAATGTAAGTACATGAACACAACTTTTATATGGTAATAACATAGATTTTCTACAATTTGATGCTATATAGTTGCAGAACTTGAATTCAAAATCTTGATTGGAGATTAAAAGCTATAACTGATCTCCATCTTTCTTGAACTTCCTTTCCTATTGTAAATGTCATTTTGTTAATAGATTCGATCCGATGGAAGATTGAGAACGCAATTTCTTCGATCGATTCCATTAGTGGGATAAAAAAAAAAAGGGAAAATGCATGTCTTGAATGTAGGACTTTGCATCTTAGCAGAACTGATAGATCCTCATTCCCAACCAAAACCATTACAGGGTAGCCTTGTATTGTAGAATGCTTGGAGGAATGGAAATGAATTCCATCCAACCAAACTTTGAAATGAGAACCCTTATTCTGATTGATATTGTTATAGACTAAGAACCACTTGAATGAAGATTGGAATCACAAAGCTCCAGTTCCCTTTATCAGTACTTGAGAGCCAGTAAATATCATCTGATGAAACAAAATCCAAGATTTTGTTTGATAATGATTTCTTTTAGCTATCTGTTTTGCAGAAAATAAGCTTAGTTCTTTGCATCTTTTAGAACACTGAAATTTCTAGTCCAATTTAGAAAGACTACTAGTTCTTGAAACTAATATTCTGCCTACACTGTTCTCTACTATGTTTATGATTACTCCACTTATCTCTGGGTGGTGAGCTTAATGGCTTAAATTTGTGAGATCCCACGTCGGTTAGAGAAGGGAACGAAGCATTCCTTATAGGGTGTGGAAACCTCTTCCTAATAAACACGTTTTAAAACCTTAAGGGGAAGCTCTCGAAGGGAAAGTCTAAAGAGAACAATATCTGCTAGTAGTGAGCTTGAGCTGTTACAAATGGTGTCAGATCCAGACGCCGGATGGTGTGCCAGCAAGGACGCTAGACCCACGAGGGGGTGATTGTGACCCAAATTAGTTGGAGAGGGGAATGACCCTCTCCTAACACCTAACATACGCATTTTAAAACCTTGAGGGGGGAAGCCCTTGAAAGAACAATATCTACTAGTGGTGGACTTGGACTTTTACTTAACTCCAGTAAGAGGTTTGTATTCGGGTCTTCATCGAAGGACCTTACTACCAGGCCATCCTTGTTTTAAGAACGATCATCAGGAAGAAATGTTAGTAAACACACCCAATACCAGTTACTTGCACTGTAAACAAAATGGATGGCAATGTGTTAGGCAGACCTCCCTTTTGCAAATCCCTCCATTCTTAAGCAAAGTTCTTTTCTTTTCTGATTTTGACTTGGAGAAGACTTAGTCAATGGGCTTTGACTTTGGGTTAAATATTTGATCTGGGTCCCAGCAAACTGGAGACGGATGACCATGGTCCCGCAGCATACTAATCCGCCCGTACTAGTTCATGCTCTGAAGGTTGGTTTATCGAAATTGTTAGATTCACTTTCATTCTTCCACACAGCGAAAGTCAGTGTACGACTCCGCTATCCCGCCTCTTGACCGAAGGGCCAACCCACCTTACACTCCCACTTTCTTTGCTGTACAGGAAGATGCAAATTGCAAAAGCCTTTTACCTGAAAAACATAGATACAGTGTTCGACCCGTCGATAGCTTCAACTAATCATGTTATTGTTGTTTCCTCCTATAATAATGTATGCAATCACTTGATTTAAGATCAGTCTTTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTGCTAGAGGAAGGTTTCCACACCCTTATAAAGGGTGGTTTGTTCTCCTTCCCAACCAATGTGGGACATCACAGCCTTCAAGTGGTGTCATTAACTCGGTTCGACATCGAAATAACACACCCAAACTAACACACACGACCGACCCGACAATGTTTCCAGCCTTTTCTTTCCAATGTTAGCAAACACCTTAAAAGGAATTAAAAGTTTTATTCTCATTCCTTCCTTTCCATTTCCTTAAAAGCAAATGGAATAAGTTTAATCTCTAATATTTTAAGTTTATTTCTATGCATAACTAGAACTACACACAAAATTAAAAATTAAATTTTAAATCTAAATTTAATAAATTAAAAAAACTTTTAATTTTTAACATTTTCAGAGCGAATGAACAACAGATATAA

mRNA sequence

ATGGATTTCTCTTCGCGATTGAACAAGCTTTTGAAACAGAGCAGTGAGTTTAAAAGCTGGTTTCTGGTGTTCGGGTGTTTCCCGCGGGAGAAATCTGCTAATATAAGAGCTGGAATTTGGTTGAAAACCAGTGTTGTTGAGGTTTGCAATTCCAAAACTGTGCAAACTTGTAGAAGTAGACGATTGAATTGGTTGAAGAAGAATGGATTCTTGTTAAGTAAGATCAATTTAGTAGCAAACCCCAAATGGACTGTGGATTCTGATGGTGATGATAAAAGTGAGGAGAAGGGTGCAGTTTTAGAAGACTATGTTGAGAATGAAGAGAACGAGAACGATTCTGAAGATGGCGAATTCGATGTTGCCAAATTAAGAGAATTGGTGAAGATTGAAAGGAAGCACAAGAAGGAGGCTCTTGAAGAGCTTGAGAAGGAAAGAATCGCAGCTGCTACTTCAGCTGAAGAGGCAATGGCTATGATATTTCGTCTGCAACATGAGAAGAGTGCAATCGAAATCCAAGCGAATCAGTTTCGCAGGATGATGGAGCAAAAGCAACAATATCATCAAGAAGTTATTGAATGTTTGCAAAGAATTATCATGGAATATGAGTCAGAGGGAAGCTTGAGCGAGCAACCATGCATCTGCAGGCCGAAAGAGAAGCTACAACTGATAGGATTCGGTGACGGTACAAGCCTCTTCGAACGTGACATGGAATTCATTCTGGAAGATGATGATGCCCTGATGAACAACATCGGCATGGACCTCGAGGAAATAGCGAATGAACAACAGATATAA

Coding sequence (CDS)

ATGGATTTCTCTTCGCGATTGAACAAGCTTTTGAAACAGAGCAGTGAGTTTAAAAGCTGGTTTCTGGTGTTCGGGTGTTTCCCGCGGGAGAAATCTGCTAATATAAGAGCTGGAATTTGGTTGAAAACCAGTGTTGTTGAGGTTTGCAATTCCAAAACTGTGCAAACTTGTAGAAGTAGACGATTGAATTGGTTGAAGAAGAATGGATTCTTGTTAAGTAAGATCAATTTAGTAGCAAACCCCAAATGGACTGTGGATTCTGATGGTGATGATAAAAGTGAGGAGAAGGGTGCAGTTTTAGAAGACTATGTTGAGAATGAAGAGAACGAGAACGATTCTGAAGATGGCGAATTCGATGTTGCCAAATTAAGAGAATTGGTGAAGATTGAAAGGAAGCACAAGAAGGAGGCTCTTGAAGAGCTTGAGAAGGAAAGAATCGCAGCTGCTACTTCAGCTGAAGAGGCAATGGCTATGATATTTCGTCTGCAACATGAGAAGAGTGCAATCGAAATCCAAGCGAATCAGTTTCGCAGGATGATGGAGCAAAAGCAACAATATCATCAAGAAGTTATTGAATGTTTGCAAAGAATTATCATGGAATATGAGTCAGAGGGAAGCTTGAGCGAGCAACCATGCATCTGCAGGCCGAAAGAGAAGCTACAACTGATAGGATTCGGTGACGGTACAAGCCTCTTCGAACGTGACATGGAATTCATTCTGGAAGATGATGATGCCCTGATGAACAACATCGGCATGGACCTCGAGGAAATAGCGAATGAACAACAGATATAA

Protein sequence

MDFSSRLNKLLKQSSEFKSWFLVFGCFPREKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLLSKINLVANPKWTVDSDGDDKSEEKGAVLEDYVENEENENDSEDGEFDVAKLRELVKIERKHKKEALEELEKERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEGSLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEIANEQQI

Homology

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BLAST of Carg19724 vs. NCBI nr
Match: XP_023552476.1 (protein FLOURY 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106
Identity = 249/292 (85.27%), Postives = 252/292 (86.30%), Query Frame = 0


Query: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPR------------------------------- 60
           MDFSSRLNKLLKQSSEFKSWFLVFGCFPR                               
Sbjct: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 61  ----EKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLLSKINLVANPKWTV 120
               EKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFL SK NL+ANPKWTV
Sbjct: 61  CDFKEKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLIANPKWTV 120

Query: 121 DSDGDDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 180
           DSDGD KSEEKGAVLEDYV NE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER
Sbjct: 121 DSDGDVKSEEKGAVLEDYVHNEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 180

Query: 181 IAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240
           +AAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG
Sbjct: 181 MAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240

Query: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEE+
Sbjct: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEM 292

[Close]

BLAST of Carg19724 vs. NCBI nr
Match: XP_022985083.1 (protein FLOURY 1-like [Cucurbita maxima])

HSP 1 Score: 383.6 bits (984), Expect = 5.2e-103
Identity = 210/292 (71.92%), Postives = 213/292 (72.95%), Query Frame = 0


Query: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPR------------------------------- 60
           MD SSRLNKLLKQSSEFKSWFLVFGCFPR                               
Sbjct: 1   MDLSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 61  ----EKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLLSKINLVANPKWTV 120
               EKSANIR GIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNG L SK NLVANP WTV
Sbjct: 61  CDFKEKSANIRDGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGCLFSKFNLVANPTWTV 120

Query: 121 DSDGDDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 180
           DSDGD KSEEKGAVLEDYV NE                                    ER
Sbjct: 121 DSDGDVKSEEKGAVLEDYVHNEENENDSEDGEFDVTKLRELVKIERKHKKEALEELEKER 180

Query: 181 IAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240
           +AAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG
Sbjct: 181 MAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240

Query: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           SLSEQPCICRPKEKLQLIGFGDGTSLFERDM+FILEDDDALMNNIGMDLEE+
Sbjct: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMKFILEDDDALMNNIGMDLEEM 292

[Close]

BLAST of Carg19724 vs. NCBI nr
Match: XP_022922517.1 (protein FLOURY 1-like [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 6.0e-99
Identity = 242/292 (82.88%), Postives = 244/292 (83.56%), Query Frame = 0


Query: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPR------------------------------- 60
           MDFSSRLNKLLKQSSEFKSWFLVFGCFPR                               
Sbjct: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 61  ----EKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLLSKINLVANPKWTV 120
               EKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFL SK NLVANPKWTV
Sbjct: 61  CDFKEKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLVANPKWTV 120

Query: 121 DSDGDDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 180
           DSDGDDKSEEK           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER
Sbjct: 121 DSDGDDKSEEK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 180

Query: 181 IAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240
           IAAATSAEEAMAMIFRLQHEKS+IEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG
Sbjct: 181 IAAATSAEEAMAMIFRLQHEKSSIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEG 240

Query: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEE+
Sbjct: 241 SLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEM 289

[Close]

BLAST of Carg19724 vs. NCBI nr
Match: XP_008454457.1 (PREDICTED: uncharacterized protein LOC103494857 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 2.5e-68
Identity = 159/289 (55.02%), Postives = 180/289 (62.28%), Query Frame = 0


Query: 7   LNKLLKQSSEFKSWFLVFGCFP------------------------------------RE 66
           ++ LLKQS EFKSWFLVFGCFP                                    R 
Sbjct: 3   ISSLLKQSIEFKSWFLVFGCFPRLFIILGLFLLLFWASLKVVQFSWHGRDLMQLLYDFRG 62

Query: 67  KSANIRAGIWLKTSVVEVCNSKTVQTCR-SRRLNWLKKNGFLLSKINLVANPKWTVDSDG 126
           KS NIRAGIWLKT+VVEVCN     TC  SRRL+WLKKNGFL  K NLVA  KW VDS+G
Sbjct: 63  KSDNIRAGIWLKTNVVEVCNF----TCGISRRLDWLKKNGFLFCKFNLVAKSKWAVDSEG 122

Query: 127 DDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERIAAA 186
           D +S+EK  +LE+ V+NE                                    ER+AAA
Sbjct: 123 DVRSDEKNEMLEEDVQNEEKENYSEDGEFDVIKLRELVKIERKQKKEALEELEKERMAAA 182

Query: 187 TSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEGSLSE 246
           T+AEEAMAMIFRLQHEKSA EI+ANQ  R+MEQKQQY QEVIECLQRIIMEYESE SL+E
Sbjct: 183 TAAEEAMAMIFRLQHEKSATEIRANQSHRLMEQKQQYCQEVIECLQRIIMEYESEVSLTE 242

Query: 247 QPCICRPKEKLQ-LIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           QPC CRPK+KLQ      D TSL + DM+F+LEDDD LMNNIGMDL+E+
Sbjct: 243 QPCFCRPKQKLQPTRSVEDDTSLLQFDMDFVLEDDDVLMNNIGMDLKEM 287

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BLAST of Carg19724 vs. NCBI nr
Match: XP_022149137.1 (protein FLOURY 1-like [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 2.3e-66
Identity = 167/296 (56.42%), Postives = 181/296 (61.15%), Query Frame = 0


Query: 1   MDFSSRLNKLLKQ-SSEFKSWFLVFGCFP------------------------------- 60
           MD +SRLNK LKQ SSEFKSW LVFGCFP                               
Sbjct: 1   MDIASRLNKFLKQSSSEFKSWVLVFGCFPRVFVILGLFLLFWMALKVLQFSWHGGDFMQF 60

Query: 61  ----REKSAN-IRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLK-KNGFLLSKINLVANPK 120
               REKSAN +R G WLKTSVVEVCNSKT+QTC SRR NWLK ++GFL +K NLVAN K
Sbjct: 61  LCDFREKSANYVRTGFWLKTSVVEVCNSKTMQTCGSRRRNWLKIRSGFLFNKFNLVANSK 120

Query: 121 WTVDSDGDDKSEEKGAV-LEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           W VD+DGD KSEEK  V         XXXX                              
Sbjct: 121 WGVDADGDVKSEEKDNVXXXXXXXXXXXXXDSEDAEFDVIRLRKLVKIERKYKKEALEEL 180

Query: 181 XXERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEY 240
             ER+AAATSAEEAMAMIFRLQHEKSAIEIQA  F RMMEQ+QQY Q+VIECLQRIIMEY
Sbjct: 181 EKERMAAATSAEEAMAMIFRLQHEKSAIEIQAKHFSRMMEQRQQYDQDVIECLQRIIMEY 240

Query: 241 ESEGSLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           E E SLSEQPC C  + K Q  GFGDG SLF+ D EFI E DD  MN I MDL+E+
Sbjct: 241 ELERSLSEQPCSCSSERKQQRTGFGDGMSLFQYDTEFIPE-DDVQMNTIDMDLKEM 295

[Close]

BLAST of Carg19724 vs. TAIR10
Match: AT1G18265.1 (Protein of unknown function, DUF593)

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09
Identity = 30/61 (49.18%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AA ++AEEAMAM+ +L+ EKS +E++  Q++R+ EQKQ Y QEVI+ LQ ++M+ + 
Sbjct: 214 ERRAAESAAEEAMAMLLKLRMEKSVVEMETKQYKRVAEQKQVYDQEVIQSLQWMLMKLDD 273

Query: 204 E 205
           +
Sbjct: 274 D 274

[Close]

BLAST of Carg19724 vs. TAIR10
Match: AT1G04890.1 (Protein of unknown function, DUF593)

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AAA++A+EAMAMI RLQ EK+AIE++A QF+R++E++  +  E +  L+ I++  E 
Sbjct: 135 ERSAAASAADEAMAMIHRLQDEKAAIEMEARQFQRLVEERSTFDAEEMVILKDILIRRER 194

Query: 204 EGSLSEQ 211
           E    E+
Sbjct: 195 EKHFLEK 201

[Close]

BLAST of Carg19724 vs. TAIR10
Match: AT4G13630.1 (Protein of unknown function, DUF593)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AAA++A+EA+ MI RLQ EK++IE++A Q++RM+E+K  +  E +  L+ I++  E 
Sbjct: 246 ERNAAASAADEALGMILRLQEEKASIEMEARQYQRMIEEKSAFDAEEMSILKEILLRRER 305

Query: 204 EGSLSEQ 211
           E    E+
Sbjct: 306 EKHFLEK 312

[Close]

BLAST of Carg19724 vs. TAIR10
Match: AT1G18990.1 (Protein of unknown function, DUF593)

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07
Identity = 26/61 (42.62%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER A+A +A  AMAMI RLQ EK+A++++A Q++RMM+++ +Y QE ++ +  ++++ E 
Sbjct: 325 ERSASAVAANNAMAMITRLQAEKAAVQMEALQYQRMMDEQAEYDQEALQSMNGLLVKREE 384

Query: 204 E 205
           E
Sbjct: 385 E 385

[Close]

BLAST of Carg19724 vs. TAIR10
Match: AT4G30830.1 (Protein of unknown function, DUF593)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER A+ TSA EAM+MI RLQ EK+ + ++A+Q++RM+E++  + +     L+ +I + E 
Sbjct: 39  EREASETSANEAMSMILRLQGEKAELAMEADQYKRMVEEQMSHAEMSFALLEDVIYQKEI 98

Query: 204 E-GSLSEQPCICRPKEKLQLIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEIANEQQ 263
           E  +L+ Q  + R   +L  +GF D  SL   D++ + EDDD   N + M+   +++  Q
Sbjct: 99  EVTALAYQVEVYR--SQLLSLGFNDLKSL---DVK-LQEDDDQDENMLKMNDFSLSDRSQ 152

[Close]

BLAST of Carg19724 vs. Swiss-Prot
Match: sp|Q9LM24|FL1L_ARATH (Protein FLOURY 1-like OS=Arabidopsis thaliana OX=3702 GN=At1g18265 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 30/61 (49.18%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AA ++AEEAMAM+ +L+ EKS +E++  Q++R+ EQKQ Y QEVI+ LQ ++M+ + 
Sbjct: 214 ERRAAESAAEEAMAMLLKLRMEKSVVEMETKQYKRVAEQKQVYDQEVIQSLQWMLMKLDD 273

Query: 204 E 205
           +
Sbjct: 274 D 274

[Close]

BLAST of Carg19724 vs. Swiss-Prot
Match: sp|A8DMN5|FL1_MAIZE (Protein FLOURY 1 OS=Zea mays OX=4577 GN=FL1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AAA++A+EAM+ I  L+ EK+ +E +A QF+ MM+QKQ Y ++VIE LQ +IM+   
Sbjct: 219 ERHAAASAADEAMSKIACLRSEKALVEREARQFQEMMQQKQMYDRQVIESLQWVIMKSGM 278

Query: 204 EG 206
           +G
Sbjct: 279 QG 280

[Close]

BLAST of Carg19724 vs. Swiss-Prot
Match: sp|Q9LMC8|MYOB5_ARATH (Probable myosin-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=MYOB5 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.0e-06
Identity = 26/61 (42.62%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER A+A +A  AMAMI RLQ EK+A++++A Q++RMM+++ +Y QE ++ +  ++++ E 
Sbjct: 325 ERSASAVAANNAMAMITRLQAEKAAVQMEALQYQRMMDEQAEYDQEALQSMNGLLVKREE 384

Query: 204 E 205
           E
Sbjct: 385 E 385

[Close]

BLAST of Carg19724 vs. TrEMBL
Match: tr|A0A1S3BY69|A0A1S3BY69_CUCME (uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 159/289 (55.02%), Postives = 180/289 (62.28%), Query Frame = 0


Query: 7   LNKLLKQSSEFKSWFLVFGCFP------------------------------------RE 66
           ++ LLKQS EFKSWFLVFGCFP                                    R 
Sbjct: 3   ISSLLKQSIEFKSWFLVFGCFPRLFIILGLFLLLFWASLKVVQFSWHGRDLMQLLYDFRG 62

Query: 67  KSANIRAGIWLKTSVVEVCNSKTVQTCR-SRRLNWLKKNGFLLSKINLVANPKWTVDSDG 126
           KS NIRAGIWLKT+VVEVCN     TC  SRRL+WLKKNGFL  K NLVA  KW VDS+G
Sbjct: 63  KSDNIRAGIWLKTNVVEVCNF----TCGISRRLDWLKKNGFLFCKFNLVAKSKWAVDSEG 122

Query: 127 DDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERIAAA 186
           D +S+EK  +LE+ V+NE                                    ER+AAA
Sbjct: 123 DVRSDEKNEMLEEDVQNEEKENYSEDGEFDVIKLRELVKIERKQKKEALEELEKERMAAA 182

Query: 187 TSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEGSLSE 246
           T+AEEAMAMIFRLQHEKSA EI+ANQ  R+MEQKQQY QEVIECLQRIIMEYESE SL+E
Sbjct: 183 TAAEEAMAMIFRLQHEKSATEIRANQSHRLMEQKQQYCQEVIECLQRIIMEYESEVSLTE 242

Query: 247 QPCICRPKEKLQ-LIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           QPC CRPK+KLQ      D TSL + DM+F+LEDDD LMNNIGMDL+E+
Sbjct: 243 QPCFCRPKQKLQPTRSVEDDTSLLQFDMDFVLEDDDVLMNNIGMDLKEM 287

[Close]

BLAST of Carg19724 vs. TrEMBL
Match: tr|A0A0A0KYH0|A0A0A0KYH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 157/289 (54.33%), Postives = 177/289 (61.25%), Query Frame = 0


Query: 7   LNKLLKQSSEFKSWFLVFGCFP------------------------------------RE 66
           ++ LLKQSSEFKSWFLVFGCFP                                    RE
Sbjct: 3   ISSLLKQSSEFKSWFLVFGCFPRVFIILGLFLLLFWLSLKVVQFSWHGRDLMQLLYDFRE 62

Query: 67  KSANIRAGIWLKTSVVEVCNSKTVQTCR-SRRLNWLKKNGFLLSKINLVANPKWTVDSDG 126
           KS NIRAG WLKT+VVEVCNS     C  S+R +WLKKNGFL  K NLVAN KW VDS+ 
Sbjct: 63  KSDNIRAGTWLKTNVVEVCNS----ICGISKRSDWLKKNGFLFCKFNLVANSKWAVDSED 122

Query: 127 DDKSEEKGAVLEDYVENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERIAAA 186
           D +S+EK  +LE+ V+NE                                    ER+AAA
Sbjct: 123 DVRSDEKNEMLEEDVQNEEKENYSEDGEFDVIKLRELVKIERKQKKEALEELEKERMAAA 182

Query: 187 TSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYESEGSLSE 246
           T+AEEAMAMIFRLQHEKSAIEIQANQ  RMM QKQ+Y QEVIECLQRI+MEYESEGSLSE
Sbjct: 183 TAAEEAMAMIFRLQHEKSAIEIQANQSHRMMGQKQEYCQEVIECLQRIVMEYESEGSLSE 242

Query: 247 QPCICRPKEKLQ-LIGFGDGTSLFERDMEFILEDDDALMNNIGMDLEEI 258
           QPC    K+KLQ      D TSL +  MEFILEDDD +MNNIGMDL+E+
Sbjct: 243 QPCFLSTKQKLQPTRSVEDDTSLLQFGMEFILEDDDVVMNNIGMDLKEM 287

[Close]

BLAST of Carg19724 vs. TrEMBL
Match: tr|A0A1U8KS06|A0A1U8KS06_GOSHI (uncharacterized protein LOC107918435 OS=Gossypium hirsutum OX=3635 GN=LOC107918435 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AA+++A+EAMAMI RLQ+EKS++EI ANQF+RM EQKQ+Y Q+VIE LQ I+M++ES
Sbjct: 186 ERTAASSAADEAMAMILRLQNEKSSVEIDANQFKRMAEQKQEYDQQVIESLQWIVMKHES 245

Query: 204 E-GSLSEQPCICRPKEKLQLIGFGDGTSLFERD 236
           E  SL  Q  +C  K+KL+L    D    FE D
Sbjct: 246 EWSSLENQLQLC--KQKLKLYMEDDELDQFELD 276

[Close]

BLAST of Carg19724 vs. TrEMBL
Match: tr|A0A0D2TVV3|A0A0D2TVV3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G054500 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AA+++A+EAMAMI RLQ+EKS++EI ANQF+RM EQKQ+Y Q+VIE LQ I+M++ES
Sbjct: 186 ERTAASSAADEAMAMILRLQNEKSSVEIDANQFKRMAEQKQEYDQQVIESLQWIVMKHES 245

Query: 204 E-GSLSEQPCICRPKEKLQLIGFGDGTSLFERD 236
           E  SL  Q  +C  K+KL+L    D    FE D
Sbjct: 246 EWSSLENQLQLC--KQKLKLYMEDDELDQFELD 276

[Close]

BLAST of Carg19724 vs. TrEMBL
Match: tr|A0A2P5QUX6|A0A2P5QUX6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24718 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 144 ERIAAATSAEEAMAMIFRLQHEKSAIEIQANQFRRMMEQKQQYHQEVIECLQRIIMEYES 203
           ER AA+++A+EAMAMI RLQ+EKS++EI ANQF+RM EQKQ+Y Q+VIE LQ I+M++ES
Sbjct: 156 ERTAASSAADEAMAMILRLQNEKSSVEIDANQFKRMAEQKQEYDQQVIESLQWIVMKHES 215

Query: 204 E-GSLSEQPCICRPKEKLQLIGFGDGTSLFERD 236
           E  SL  Q  +C  K+KL+L    D    FE D
Sbjct: 216 EWSSLENQLQLC--KQKLKLYMEDDELDQFELD 246

The following BLAST results are available for this feature:

BLAST of Carg19724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552476.1	2.3e-106	85.27	protein FLOURY 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985083.1	5.2e-103	71.92	protein FLOURY 1-like [Cucurbita maxima]	[more]
XP_022922517.1	6.0e-99	82.88	protein FLOURY 1-like [Cucurbita moschata]	[more]
XP_008454457.1	2.5e-68	55.02	PREDICTED: uncharacterized protein LOC103494857 [Cucumis melo]	[more]
XP_022149137.1	2.3e-66	56.42	protein FLOURY 1-like [Momordica charantia]	[more]

BLAST of Carg19724 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18265.1	9.1e-09	49.18	Protein of unknown function, DUF593	[more]
AT1G04890.1	7.7e-08	46.27	Protein of unknown function, DUF593	[more]
AT4G13630.1	1.0e-07	43.28	Protein of unknown function, DUF593	[more]
AT1G18990.1	5.0e-07	42.62	Protein of unknown function, DUF593	[more]
AT4G30830.1	1.5e-06	35.00	Protein of unknown function, DUF593	[more]

BLAST of Carg19724 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LM24\|FL1L_ARATH	1.6e-07	49.18	Protein FLOURY 1-like OS=Arabidopsis thaliana OX=3702 GN=At1g18265 PE=2 SV=1	[more]
sp\|A8DMN5\|FL1_MAIZE	1.4e-06	50.00	Protein FLOURY 1 OS=Zea mays OX=4577 GN=FL1 PE=1 SV=1	[more]
sp\|Q9LMC8\|MYOB5_ARATH	9.0e-06	42.62	Probable myosin-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=MYOB5 PE=2 ...	[more]

BLAST of Carg19724 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BY69\|A0A1S3BY69_CUCME	1.6e-68	55.02	uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=...	[more]
tr\|A0A0A0KYH0\|A0A0A0KYH0_CUCSA	2.6e-66	54.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710 PE=4 SV=1	[more]
tr\|A0A1U8KS06\|A0A1U8KS06_GOSHI	1.8e-14	56.99	uncharacterized protein LOC107918435 OS=Gossypium hirsutum OX=3635 GN=LOC1079184...	[more]
tr\|A0A0D2TVV3\|A0A0D2TVV3_GOSRA	1.8e-14	56.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G054500 PE=4 ...	[more]
tr\|A0A2P5QUX6\|A0A2P5QUX6_GOSBA	1.8e-14	56.99	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24718 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007656	GTD-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19724-RA	Carg19724-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..158
None	No IPR available	PANTHER	PTHR31422	FAMILY NOT NAMED	coord: 18..214
None	No IPR available	PANTHER	PTHR31422:SF2	T10O22.23	coord: 18..214
IPR007656	GTD-binding domain	PFAM	PF04576	Zein-binding	coord: 122..205 e-value: 4.2E-26 score: 90.9
IPR007656	GTD-binding domain	PROSITE	PS51775	GTD_BINDING	coord: 118..215 score: 18.895

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19724	Cla006492	Watermelon (97103) v1	carwmB0287
Carg19724	Csa4G181710	Cucumber (Chinese Long) v2	carcuB0321
Carg19724	MELO3C018050	Melon (DHL92) v3.5.1	carmeB0297
Carg19724	ClCG10G009680	Watermelon (Charleston Gray)	carwcgB0287
Carg19724	CSPI04G11790	Wild cucumber (PI 183967)	carcpiB0327
Carg19724	Cucsa.331890	Cucumber (Gy14) v1	carcgyB0347
Carg19724	CmoCh16G002990	Cucurbita moschata (Rifu)	carcmoB0402
Carg19724	Lsi03G009800	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19724	Cp4.1LG14g04900	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19724	CsGy4G011220	Cucumber (Gy14) v2	carcgybB0308
Carg19724	MELO3C018050.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19724	CsaV3_4G014720	Cucumber (Chinese Long) v3	carcucB0327

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19724	Silver-seed gourd	carcarB324
Carg19724	Cucurbita maxima (Rimu)	carcmaB0405
Carg19724	Cucurbita maxima (Rimu)	carcmaB0406
Carg19724	Cucurbita maxima (Rimu)	carcmaB0408
Carg19724	Cucurbita moschata (Rifu)	carcmoB0401
Carg19724	Cucurbita moschata (Rifu)	carcmoB0403
Carg19724	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19724	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19724	Melon (DHL92) v3.6.1	carmedB0306
Carg19724	Watermelon (97103) v2	carwmbB0302
Carg19724	Wax gourd	carwgoB0381