Carg19707 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19707
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	dentin sialophosphoprotein
Location	Cucurbita_argyrosperma_scaffold_133 : 260247 .. 261812 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGAAATTACCGGGTCGGAGCAGCAGGTCGAAAGGCATCAAAGTGAAGCATATTCTGCAGATTGTTCTGTTGGTTGGTGTTTGCTTTTGGTTAGTTTATCAGGTGAAGCGCTCCCATGACAAGAAGAAAGGATTCGACCAGAAAGATAATGAAATAACGATAAGAACTCGGGATGGAGGGGATGTTTTGAAATTTGGAAGGAAAGAGCTTCACCCACATGTTGAGGAAGTTCATCCCGACTCGAAGCAAGAGGACGATGAGGAGGAAGACTCAAAGCATGAGGTTGAAGAGGGAGGTGAAGAACTGAAAAATGAGGCAGTCGATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGGCAGTCAATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGTCAGTCAATGAGGAGGATGAAGGAAGCAAGCATGAAGATGAAGAGGAGACGGATGATGATGGGAGAGGAGGTGGCGATGACGATATGAATGAGAATGATCGAGAGAAGTCCGATAATGAATCCGATCATGAAGGTGAGAATGCGGACGATGAGAGATTGAAAGAAGACGGTGATGAGGAGGCAGGAGGAGATGAGAATTCTTCTGATGAGCAGGAGAACGACAATGGTGATCCGATCACTCATGAGGCACGGGAGGAAAACTACAAGGGGGATGATGCATCTAGTGCCGTGGCCCATGACGACCACTCTACCACCTCGACAGACGACGTGAGTTTAGAAAGTTCAAGTGAGAACGCAGAGCTGAATAACAAAGAACAGAACAGTGAATCAAATGAAACCGAAGCGATTCGTTCACGGTTAACCGAGGAAGTAGATAAAATGGCTAACAATGAAACTTCAACGAACGAGAATTTCAATGATGTGAAGCTCAGCGAAAACACGTCCTTCCCTACTGGTTCAGTTCAAGATTCAATCCCGACCGCTCAATCCGATGATCAACCTGAATCGAGCAATAATACATCCTCTGCAACTACTGATACAAGTAATGTAGAGAATGCAGATTCTTCTCGGCAGAAGGGAACAGAAATTGATTTGAATCATACTCAAAGTGAAATCATAGACAATTTGGCTGCTAAGAATGAAACATCTCTTCAGTCTATACTCACAGATATGAATGACAAGGTTTTGGAGAACAGCACTTCTGAATCTCAGCCAAATGAGGTTGAAGGCGAAACCCGAAACATCACAAGTAAGCCAGATCTTACTGTTTCAGACGACGAGACATCCGAAACGAAGAAAGACAACAAAACAAACAAACCGGAGAATGTCTTACCGACCATGATACCCGAGGAGAATAGTGAAGCTACTCATAACGACAAGTCGGAAGACAATGGCGAATCCAACGACAATAGCTCCAACTCGACAAACCACATTGAGGACCCAGTTCAAGACGATCGTTTTGATTCTAACGACTCCCATGTAACCGAACGGGTGGATCTAGATATGCTTCCAGACATCGAGATTGACAATAGTGAAGAGACTGCAGCAGAATGA

mRNA sequence

ATGTTGAAGAAATTACCGGGTCGGAGCAGCAGGTCGAAAGGCATCAAAGTGAAGCATATTCTGCAGATTGTTCTGTTGGTTGGTGTTTGCTTTTGGTTAGTTTATCAGGTGAAGCGCTCCCATGACAAGAAGAAAGGATTCGACCAGAAAGATAATGAAATAACGATAAGAACTCGGGATGGAGGGGATGTTTTGAAATTTGGAAGGAAAGAGCTTCACCCACATGTTGAGGAAGTTCATCCCGACTCGAAGCAAGAGGACGATGAGGAGGAAGACTCAAAGCATGAGGTTGAAGAGGGAGGTGAAGAACTGAAAAATGAGGCAGTCGATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGGCAGTCAATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGTCAGTCAATGAGGAGGATGAAGGAAGCAAGCATGAAGATGAAGAGGAGACGGATGATGATGGGAGAGGAGGTGGCGATGACGATATGAATGAGAATGATCGAGAGAAGTCCGATAATGAATCCGATCATGAAGGTGAGAATGCGGACGATGAGAGATTGAAAGAAGACGGTGATGAGGAGGCAGGAGGAGATGAGAATTCTTCTGATGAGCAGGAGAACGACAATGGTGATCCGATCACTCATGAGGCACGGGAGGAAAACTACAAGGGGGATGATGCATCTAGTGCCGTGGCCCATGACGACCACTCTACCACCTCGACAGACGACGTGAGTTTAGAAAGTTCAAGTGAGAACGCAGAGCTGAATAACAAAGAACAGAACAGTGAATCAAATGAAACCGAAGCGATTCGTTCACGGTTAACCGAGGAAGTAGATAAAATGGCTAACAATGAAACTTCAACGAACGAGAATTTCAATGATGTGAAGCTCAGCGAAAACACGTCCTTCCCTACTGGTTCAGTTCAAGATTCAATCCCGACCGCTCAATCCGATGATCAACCTGAATCGAGCAATAATACATCCTCTGCAACTACTGATACAAGTAATGTAGAGAATGCAGATTCTTCTCGGCAGAAGGGAACAGAAATTGATTTGAATCATACTCAAAGTGAAATCATAGACAATTTGGCTGCTAAGAATGAAACATCTCTTCAGTCTATACTCACAGATATGAATGACAAGGTTTTGGAGAACAGCACTTCTGAATCTCAGCCAAATGAGGTTGAAGGCGAAACCCGAAACATCACAAGTAAGCCAGATCTTACTGTTTCAGACGACGAGACATCCGAAACGAAGAAAGACAACAAAACAAACAAACCGGAGAATGTCTTACCGACCATGATACCCGAGGAGAATAGTGAAGCTACTCATAACGACAAGTCGGAAGACAATGGCGAATCCAACGACAATAGCTCCAACTCGACAAACCACATTGAGGACCCAGTTCAAGACGATCGTTTTGATTCTAACGACTCCCATGTAACCGAACGGGTGGATCTAGATATGCTTCCAGACATCGAGATTGACAATAGTGAAGAGACTGCAGCAGAATGA

Coding sequence (CDS)

ATGTTGAAGAAATTACCGGGTCGGAGCAGCAGGTCGAAAGGCATCAAAGTGAAGCATATTCTGCAGATTGTTCTGTTGGTTGGTGTTTGCTTTTGGTTAGTTTATCAGGTGAAGCGCTCCCATGACAAGAAGAAAGGATTCGACCAGAAAGATAATGAAATAACGATAAGAACTCGGGATGGAGGGGATGTTTTGAAATTTGGAAGGAAAGAGCTTCACCCACATGTTGAGGAAGTTCATCCCGACTCGAAGCAAGAGGACGATGAGGAGGAAGACTCAAAGCATGAGGTTGAAGAGGGAGGTGAAGAACTGAAAAATGAGGCAGTCGATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGGCAGTCAATGAGGAGGAAGACTCGAAGCATGAGGTAGAAGAGGCACGTGAAGAACTGAAAAACGAGTCAGTCAATGAGGAGGATGAAGGAAGCAAGCATGAAGATGAAGAGGAGACGGATGATGATGGGAGAGGAGGTGGCGATGACGATATGAATGAGAATGATCGAGAGAAGTCCGATAATGAATCCGATCATGAAGGTGAGAATGCGGACGATGAGAGATTGAAAGAAGACGGTGATGAGGAGGCAGGAGGAGATGAGAATTCTTCTGATGAGCAGGAGAACGACAATGGTGATCCGATCACTCATGAGGCACGGGAGGAAAACTACAAGGGGGATGATGCATCTAGTGCCGTGGCCCATGACGACCACTCTACCACCTCGACAGACGACGTGAGTTTAGAAAGTTCAAGTGAGAACGCAGAGCTGAATAACAAAGAACAGAACAGTGAATCAAATGAAACCGAAGCGATTCGTTCACGGTTAACCGAGGAAGTAGATAAAATGGCTAACAATGAAACTTCAACGAACGAGAATTTCAATGATGTGAAGCTCAGCGAAAACACGTCCTTCCCTACTGGTTCAGTTCAAGATTCAATCCCGACCGCTCAATCCGATGATCAACCTGAATCGAGCAATAATACATCCTCTGCAACTACTGATACAAGTAATGTAGAGAATGCAGATTCTTCTCGGCAGAAGGGAACAGAAATTGATTTGAATCATACTCAAAGTGAAATCATAGACAATTTGGCTGCTAAGAATGAAACATCTCTTCAGTCTATACTCACAGATATGAATGACAAGGTTTTGGAGAACAGCACTTCTGAATCTCAGCCAAATGAGGTTGAAGGCGAAACCCGAAACATCACAAGTAAGCCAGATCTTACTGTTTCAGACGACGAGACATCCGAAACGAAGAAAGACAACAAAACAAACAAACCGGAGAATGTCTTACCGACCATGATACCCGAGGAGAATAGTGAAGCTACTCATAACGACAAGTCGGAAGACAATGGCGAATCCAACGACAATAGCTCCAACTCGACAAACCACATTGAGGACCCAGTTCAAGACGATCGTTTTGATTCTAACGACTCCCATGTAACCGAACGGGTGGATCTAGATATGCTTCCAGACATCGAGATTGACAATAGTGAAGAGACTGCAGCAGAATGA

Protein sequence

MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRDGGDVLKFGRKELHPHVEEVHPDSKQEDDEEEDSKHEVEEGGEELKNEAVDEEEDSKHEVEEAREELKNEAVNEEEDSKHEVEEAREELKNESVNEEDEGSKHEDEEETDDDGRGGGDDDMNENDREKSDNESDHEGENADDERLKEDGDEEAGGDENSSDEQENDNGDPITHEAREENYKGDDASSAVAHDDHSTTSTDDVSLESSSENAELNNKEQNSESNETEAIRSRLTEEVDKMANNETSTNENFNDVKLSENTSFPTGSVQDSIPTAQSDDQPESSNNTSSATTDTSNVENADSSRQKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDMNDKVLENSTSESQPNEVEGETRNITSKPDLTVSDDETSETKKDNKTNKPENVLPTMIPEENSEATHNDKSEDNGESNDNSSNSTNHIEDPVQDDRFDSNDSHVTERVDLDMLPDIEIDNSEETAAE

Homology

[Close]

BLAST of Carg19707 vs. NCBI nr
Match: XP_023552912.1 (dentin sialophosphoprotein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73
Identity = 418/523 (79.92%), Postives = 420/523 (80.31%), Query Frame = 0


Query: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
           MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD
Sbjct: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60

Query: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXXXEGGEELKNE--XXXXXXXXXXX 120
           GGDVLKFGRKELHPHVEEVHPDS XXXXXXXXXXXXXX G EELKNE  XXXXXXXXXXX
Sbjct: 61  GGDVLKFGRKELHPHVEEVHPDSXXXXXXXXXXXXXXXXGREELKNEXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSRLTEEVDKTA 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESXNNTSSATTDTSNVENAD 360
                                                  PES                  
Sbjct: 301 NNETSTNENFSDVKLSENTSFPTDVSVQDSIPTAQSNDQPESSXXXXXXXXXXXXXXXXX 360

Query: 361 SSRQKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDMNDKVLENSTSESQPNEVEGETRN 420
              QKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDMNDKVLENSTS SQPNEVEGETRN
Sbjct: 361 XXXQKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDMNDKVLENSTSASQPNEVEGETRN 420

Query: 421 ITSKPDLTVSDDETSETKKDNXXXXPENVLPTMIPEENSXXXXXXXXXXXXXXXXXXXXX 480
           ITSKPDLTVSDDETS+TKKDN    PENVLPTMIP+ENS          XXXXXXXXXXX
Sbjct: 421 ITSKPDLTVSDDETSKTKKDNRTNEPENVLPTMIPKENSEATHNDKSEDXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXDRFDSNDSHVTERVDLDMLPDIEIDNSEETAAE 522
           XX        DR DSNDSHVTERVDLD LPDIEIDNSEETAAE
Sbjct: 481 XXHIEDPVQDDRLDSNDSHVTERVDLDTLPDIEIDNSEETAAE 523

[Close]

BLAST of Carg19707 vs. NCBI nr
Match: XP_023552909.1 (dentin sialophosphoprotein isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552910.1 dentin sialophosphoprotein isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552911.1 dentin sialophosphoprotein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 9.5e-72
Identity = 439/546 (80.40%), Postives = 443/546 (81.14%), Query Frame = 0


Query: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
           MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD
Sbjct: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60

Query: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXXXEGGEELKNE-------XXXXXX 120
           GGDVLKFGRKELHPHVEEVHPDS XXXXXXXXXXXXXX G EELKNE       XXXXXX
Sbjct: 61  GGDVLKFGRKELHPHVEEVHPDSXXXXXXXXXXXXXXXXGREELKNEXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESXNNTSSATTDTSN 360
           XXXXXXXXXX                                  P   +   S  T  SN
Sbjct: 301 XXXXXXXXXXIRSRLTEEVDKTANNETSTNENFSDVKLSENTSFPTDVSVQDSIPTAQSN 360

Query: 361 VENADS------------------SRQKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDM 420
            +   S                    QKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDM
Sbjct: 361 DQPESSXXXXXXXXXXXXXXXXXXXXQKGTEIDLNHTQSEIIDNLAAKNETSLQSILTDM 420

Query: 421 NDKVLENSTSESQPNEVEGETRNITSKPDLTVSDDETSETKKDNXXXXPENVLPTMIPEE 480
           NDKVLENSTS SQPNEVEGETRNITSKPDLTVSDDETS+TKKDN    PENVLPTMIP+E
Sbjct: 421 NDKVLENSTSASQPNEVEGETRNITSKPDLTVSDDETSKTKKDNRTNEPENVLPTMIPKE 480

Query: 481 NSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRFDSNDSHVTERVDLDMLPDIEIDNS 522
           NS          XXXXXXXXXXXXX        DR DSNDSHVTERVDLD LPDIEIDNS
Sbjct: 481 NSEATHNDKSEDXXXXXXXXXXXXXHIEDPVQDDRLDSNDSHVTERVDLDTLPDIEIDNS 540

[Close]

BLAST of Carg19707 vs. NCBI nr
Match: XP_022922859.1 (uncharacterized protein PF11_0207-like isoform X3 [Cucurbita moschata] >XP_022922860.1 uncharacterized protein PF11_0207-like isoform X4 [Cucurbita moschata] >XP_022922861.1 uncharacterized protein PF11_0207-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 9.5e-56
Identity = 432/698 (61.89%), Postives = 433/698 (62.03%), Query Frame = 0


Query: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
           MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD
Sbjct: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60

Query: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXXXEGGEELKNE------------- 120
           GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXX  EG EELKNE             
Sbjct: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXVEEGHEELKNEXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 --------------------------------------------XXXXXXXXXXXXXXXX 300
                                                       XXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRSRLTEEVDKVANNETS 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESXNNTSSATTDTSNVENADSSRQK 522
                                             PE  NNTSSA     NVENADSS+QK
Sbjct: 481 TNENFSNVKLSENTSFPTDGSVQDSIPTAQSDDQPELSNNTSSAXXXXXNVENADSSQQK 540

[Close]

BLAST of Carg19707 vs. NCBI nr
Match: XP_022922854.1 (uncharacterized protein PF11_0207-like isoform X1 [Cucurbita moschata] >XP_022922856.1 uncharacterized protein PF11_0207-like isoform X1 [Cucurbita moschata] >XP_022922857.1 uncharacterized protein PF11_0207-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 219.2 bits (557), Expect = 3.4e-53
Identity = 432/720 (60.00%), Postives = 433/720 (60.14%), Query Frame = 0


Query: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
           MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD
Sbjct: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60

Query: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXXXEGGEELKNE------------- 120
           GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXX  EG EELKNE             
Sbjct: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXVEEGHEELKNEXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESX 522
           XXX                                                     PE  
Sbjct: 481 XXXAIRSRLTEEVDKVANNETSTNENFSNVKLSENTSFPTDGSVQDSIPTAQSDDQPELS 540

[Close]

BLAST of Carg19707 vs. NCBI nr
Match: XP_022922858.1 (uncharacterized protein PF11_0207-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 211.5 bits (537), Expect = 7.0e-51
Identity = 470/708 (66.38%), Postives = 475/708 (67.09%), Query Frame = 0


Query: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
           MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD
Sbjct: 1   MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60

Query: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXXXEGGEELKNE------------- 120
           GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXX  EG EELKNE             
Sbjct: 61  GGDVLKFGRKELHPHVEEVHPDSKXXXXXXXXXXXXVEEGHEELKNEXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 -----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXPESXNNTSSATTDTSNVE----------------------------- 522
           XXX           +  NN +S   + SNV+                             
Sbjct: 481 XXXAIRSRLTEEVDKVANNETSTNENFSNVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

[Close]

BLAST of Carg19707 vs. TAIR10
Match: AT4G33740.1 (unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 2.9e-14
Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 2  LKKLPGRSSR-SKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNE----ITI 61
          +KK   RS R SKGIK KH+LQI +L+GVC WL+YQVK SHDKKK F +KD E    +  
Sbjct: 1  MKKTSTRSQRGSKGIKGKHVLQICVLLGVCIWLIYQVKYSHDKKKEFYEKDVEKSTVLLS 60

Query: 62 RTRDGGDVLKFGRKELHP 75
             DG  V+K GRK+L P
Sbjct: 61 EVEDG--VVKLGRKDLLP 76

[Close]

BLAST of Carg19707 vs. TAIR10
Match: AT4G37820.1 (unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-12
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 4  KLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRDGGD 63
          + P R  RSKGIKVKH +Q+ LL+GV  WL+YQ+K SH+KK  F +  ++I +   D   
Sbjct: 3  RTPRRGQRSKGIKVKHCIQLTLLLGVGIWLIYQMKHSHEKKAEF-EGTSKIVVDDID-NT 62

Query: 64 VLKFGRKELHPHVEE 79
          V+  GRK+L P +EE
Sbjct: 63 VVNLGRKDLRPRIEE 75

[Close]

BLAST of Carg19707 vs. TAIR10
Match: AT2G22795.1 (unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-12
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          M +  P R  RSKG KVKH +Q+ LL+ V  WL+YQVK SH+KK  F++    +      
Sbjct: 1  MFRSSPRRGQRSKGFKVKHCIQLTLLLSVGIWLLYQVKHSHEKKAQFEESAKIVV----- 60

Query: 61 GG--DVLKFGRKELHPHVEEV 80
          GG   V+K GRK+L P V EV
Sbjct: 61 GGVDKVVKLGRKDLIPRVVEV 76

[Close]

BLAST of Carg19707 vs. TrEMBL
Match: tr|A0A1S3BZU0|A0A1S3BZU0_CUCME (myb-like protein X OS=Cucumis melo OX=3656 GN=LOC103494839 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          MLKK P RSSRSKGIKVKHILQIVLL+GVCFWL+YQVKRSHDKKK FDQKDNE+TI+T++
Sbjct: 1  MLKKSPSRSSRSKGIKVKHILQIVLLLGVCFWLIYQVKRSHDKKKEFDQKDNELTIKTQE 60

Query: 61 GGDVLKFGRKELHPHVEEVHPDSK 85
          GG +LK GRK+L P VEEVHP  K
Sbjct: 61 GGGLLKLGRKDLRPEVEEVHPGEK 84

[Close]

BLAST of Carg19707 vs. TrEMBL
Match: tr|A0A0A0KSY0|A0A0A0KSY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000020 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-29
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          MLKK P RSSRSKGIKVKHILQIVLLVGVCFWL+YQVKRSHDKKK FDQKDNEITI+T++
Sbjct: 1  MLKKSPSRSSRSKGIKVKHILQIVLLVGVCFWLIYQVKRSHDKKKEFDQKDNEITIKTQE 60

Query: 61 GGDVLKFGRKELHPHVEEVHP 82
           G +LK GRK+L P VEEVHP
Sbjct: 61 EGGLLKLGRKDLRPEVEEVHP 81

[Close]

BLAST of Carg19707 vs. TrEMBL
Match: tr|A0A2I4F5I4|A0A2I4F5I4_9ROSI (dentin sialophosphoprotein OS=Juglans regia OX=51240 GN=LOC108995737 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23
Identity = 51/79 (64.56%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          M+K+ P R+ RSKGIKVKH+LQI LL+GVCFWL+YQVK SHDKKK FD+KD +++++T+ 
Sbjct: 1  MIKRSPSRNHRSKGIKVKHVLQICLLLGVCFWLIYQVKHSHDKKKEFDEKDAKLSVKTQS 60

Query: 61 GGDVLKFGRKELHPHVEEV 80
          G ++LK GRK++HPH+EEV
Sbjct: 61 GTELLKLGRKDIHPHLEEV 79

[Close]

BLAST of Carg19707 vs. TrEMBL
Match: tr|A0A2P2JJT4|A0A2P2JJT4_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22
Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          M K++P R+SRSKGIKVKH+LQI LL+GVCFWLVYQVKRSHDKKK FD+ D + +I+ + 
Sbjct: 1  MNKRIPSRNSRSKGIKVKHVLQICLLLGVCFWLVYQVKRSHDKKKEFDENDPKASIKAQS 60

Query: 61 GGDVLKFGRKELHPHVEEVHPDSK 85
            +VLK GRK+LHP V+E   + K
Sbjct: 61 ADEVLKLGRKDLHPRVQEASKNEK 84

[Close]

BLAST of Carg19707 vs. TrEMBL
Match: tr|A0A2P2JJR1|A0A2P2JJR1_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.5e-22
Identity = 50/84 (59.52%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MLKKLPGRSSRSKGIKVKHILQIVLLVGVCFWLVYQVKRSHDKKKGFDQKDNEITIRTRD 60
          M+K+ P R+SRS+GIKV H+LQ+ LL+GVCFWL+YQVK SHDKKK FD+KD + +I+ + 
Sbjct: 1  MIKRTPNRNSRSRGIKVTHVLQVCLLLGVCFWLIYQVKHSHDKKKEFDEKDAKASIKAQS 60

Query: 61 GGDVLKFGRKELHPHVEEVHPDSK 85
            +VL+FGRK LHPHV+E   + K
Sbjct: 61 ADEVLRFGRKGLHPHVQEASRNEK 84

The following BLAST results are available for this feature:

BLAST of Carg19707 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552912.1	1.7e-73	79.92	dentin sialophosphoprotein isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023552909.1	9.5e-72	80.40	dentin sialophosphoprotein isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552910...	[more]
XP_022922859.1	9.5e-56	61.89	uncharacterized protein PF11_0207-like isoform X3 [Cucurbita moschata] >XP_02292...	[more]
XP_022922854.1	3.4e-53	60.00	uncharacterized protein PF11_0207-like isoform X1 [Cucurbita moschata] >XP_02292...	[more]
XP_022922858.1	7.0e-51	66.38	uncharacterized protein PF11_0207-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg19707 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33740.1	2.9e-14	56.41	unknown protein	[more]
AT4G37820.1	1.6e-12	48.00	unknown protein	[more]
AT2G22795.1	4.6e-12	46.91	unknown protein	[more]

BLAST of Carg19707 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19707 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZU0\|A0A1S3BZU0_CUCME	1.6e-30	79.76	myb-like protein X OS=Cucumis melo OX=3656 GN=LOC103494839 PE=4 SV=1	[more]
tr\|A0A0A0KSY0\|A0A0A0KSY0_CUCSA	1.0e-29	82.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000020 PE=4 SV=1	[more]
tr\|A0A2I4F5I4\|A0A2I4F5I4_9ROSI	1.1e-23	64.56	dentin sialophosphoprotein OS=Juglans regia OX=51240 GN=LOC108995737 PE=4 SV=1	[more]
tr\|A0A2P2JJT4\|A0A2P2JJT4_RHIMU	1.6e-22	63.10	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2P2JJR1\|A0A2P2JJR1_RHIMU	3.5e-22	59.52	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19707-RA	Carg19707-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 274..294
None	No IPR available	COILS	Coil	Coil	coord: 94..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..426
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..521
None	No IPR available	PANTHER	PTHR33700:SF10	SUBFAMILY NOT NAMED	coord: 1..521
None	No IPR available	PANTHER	PTHR33700	FAMILY NOT NAMED	coord: 1..521

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19707	Cla006466	Watermelon (97103) v1	carwmB0287
Carg19707	Csa4G000020	Cucumber (Chinese Long) v2	carcuB0322
Carg19707	MELO3C018032	Melon (DHL92) v3.5.1	carmeB0297
Carg19707	ClCG10G009920	Watermelon (Charleston Gray)	carwcgB0287
Carg19707	CSPI04G00020	Wild cucumber (PI 183967)	carcpiB0328
Carg19707	Cucsa.298580	Cucumber (Gy14) v1	carcgyB0346
Carg19707	CmaCh04G004220	Cucurbita maxima (Rimu)	carcmaB0408
Carg19707	CmaCh16G002960	Cucurbita maxima (Rimu)	carcmaB0406
Carg19707	CmoCh04G004550	Cucurbita moschata (Rifu)	carcmoB0403
Carg19707	CmoCh16G003170	Cucurbita moschata (Rifu)	carcmoB0402
Carg19707	Lsi03G009990	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19707	Cp4.1LG14g04810	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19707	Cp4.1LG01g02830	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19707	CsGy4G000020	Cucumber (Gy14) v2	carcgybB0309
Carg19707	MELO3C018032.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19707	Bhi11G000896	Wax gourd	carwgoB0381

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19707	Carg08097	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19707	Cucumber (Gy14) v1	carcgyB0344
Carg19707	Cucurbita maxima (Rimu)	carcmaB0405
Carg19707	Cucurbita moschata (Rifu)	carcmoB0401
Carg19707	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19707	Cucumber (Chinese Long) v2	carcuB0323
Carg19707	Cucumber (Chinese Long) v3	carcucB0329
Carg19707	Melon (DHL92) v3.6.1	carmedB0306
Carg19707	Watermelon (97103) v2	carwmbB0302