Carg19693 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19693
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	telomere repeat-binding factor 1
Location	Cucurbita_argyrosperma_scaffold_133 : 193301 .. 198739 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGTAAATAATGATGTTTTAGTAGTCTTTAGCTCACTATTTCACAACTCTTTTATGTGAACTTTTGGTAGTTCTTCATATTCGTTGGAAGAGGAATTGTATTTATATTATTTTTTTGTTATTTTTTTCGTATTCTGTCCTGTCGTTTCTGGGGTGAACAGTTCTTTGTTTTTTCGTATCTTTGATCTTGCTTGATTTTTCTTCTGATTTTCCCGTATTGCTTTTTCTTGCCAATCTTCTTCAACATTTGTATCTGTTGGGTTTTTCAAACGTTTTTGTATATTTTAGGACAATGCTATTATCTCATTGCCAATATTCTATAGTAATGCAAAAGTGTAAAGTCGAATACTAATATGCTAGTATTTAGTACCTGAATTTTTTTGGGTTTTGAAGATCAGTAGTAGCATTTATGGTGATTTGTTTTGTATTGACATTGTATTGATTGAATGAAATCCAATCTTAAGTGCTGAGGATAATGTCAACATGCGACTATTAGGCAGCCCCTAGATCGCTTCGGCTAGTATCATTTGGTTCAAGCTTGGGTCCACATTCATCAACGCGCCACCTGATTTGAGTATTTTAGCAGTCCAGATTGGTACGGACCGAAATTTCTTAATTATTATACATTAGGTTCTGAGATAAAGCTCCTTTAGCATTTATTGTGATGAGTGTTAAGTATCATGTGCTTAAACATCACAATCATAAATCCTGATCCTTTTCAATCTTCTGTAGAAGGATCAGAACTAATCGTGCACTGTCAGTATGTTACAAGTTAAGCGAGGCTTGAAATCTGTTGTAGTTGGGACTTAGAAGCTTACATATGAATTGGGGTTAAATTATTAGCTGATTTGAAGAAGAAATCTAGAAATATTTTGATAGAAAATGAATATTATATTTACAGAGATGTAACACTAGAGGAATGGGATAAAATACCACCCAATCAATAGCCTCAAGGCCAAGGGTTGCAAAATGGATTTCAAATTGGCATGAACTGTAGCAAGATAGTAATTAGGGAGAGCTCAATTTGAAGGGATGAATGTCAATAAATGTAGAACTACAAGTTTCACTTTCAACATTGGGAAACTGCCTCCTATTCCTCTCATTTCACAATGAAAGGCCTGTGGAACATATCATGAGAGACCAAAATTTCTAAACAGAAAATTGTAGATTGTTTAAGTTAAGCTACACTCAAAAAGGTTGATCAATGTTATTGCTTTTACACTTTATTTGGCAATGGCTTGTTTCTTTTAAATGGTAAAATAACAAAATTCGAGAGATTTATCTTCTCCCTTGTTTTCCAGGAAAAAACGTTGAGCATGTTTTTTAGCCGTTCAACTAGATTTTCTAATCACATTTTTATCATTTTCAAATTACTGGGTTATCTAAGCTTTAGGGACTCCATCACGTTTTTACCTCTAGAATAATATGGGTTTTTCAAATTGGCTCTAGTTTTGAATCATTATCACGAAACTCTCCCCGGACTCTGTCATGTTTTTTTAAGTGTGAAATGGAATTTTTTTTAAAAACAAATGATCTATGGCTGCTAGCTGCAAGAAGCAATCTAATTTTCCTGGCGCGTTTATTTCTTTTGTATTCTGAATAAATGTATCTTCATGCCCCACTTATATAGAACGAAAAAAGACAAGATAAAGGGAGTCCAGAGTAAGAAGCACAGACTCAGAATCATTGAATGAAGAGAGTAATAAACGGATTAGGGCATGAGAAGAGGATCTAGGAGTTAGGATGTACGGAAGGTCAAGTTATCATAAGTGTCATGATGGGTCGTGTAGCTTTGGGAAATAAATTGGTCATAAACTACTTCTCATAAATCAAGTATTAGTCTCATATAATTAATGTAGACTCTATAAAACATAGATAATTAGACAAGAGGACCAAAAAAAATGATTGGGACACCATTGTGTACGGAAAAAAATGCAACAGCAAATAATTACATTTATCTATAAAGGTGGGAATATAATAATAGGGTTTTTACTATGCACTCTGAACATACGCTAAAGTCCGTGTATTATAGCATGCACTTGGGTAGTTCCAGAGCATGAGGATGTTCAAAAATGCTTTAGTATATTGTTCTGGTTCTGTTTTTTAAGACTATTATTTTTTATCCACGGATTAGCTAACTACCAACTCTCCTCATAACTTTGAGGTCAATTATTCTACGCCTTGAGGTGGTGGATCGGTGGTCAACGATCTCACATCAGTTTCTTCGTCTTCGGCGCTACAAAGATATACCTCTATATATTAAGAGTAGTCTCTTTTCATCAAATGCTCAAAGACTACTATCTTACTTACTAATTTGAAGATCTCCTTCTGTCATTTACTCCTCCGTATTGAATGCACAGGAGAACATAGAAATGGAGAAATGGTTGTTTCGGTCTGAACATCCAATTAGAATGTTCGATCCTCTTACATAATTTAGGACCTTCGTTTCTTTACTTAAAATAAATCTGTATACTTTCCTCTTCCTTCATTCCTCATTTACAACTCACTTTTTCCCCACATCCTCCCCAGCACCTTGTCCATGGAACAAAGACAAATAGTCTCGGCTTAAAGCACAAAGTTTAGAACAAAACCTAATTTAATGTATTCGACACTTCGAGCTTATCGATTTATATTCATGATGCTAGTGCTCATCTTCTGAAAACAAGGGGCAAAAACGGCTTCTATTGATTGGTAACTATTAATTTTTGGATTGATAGGAGAGTTATATTGATTATTCTGAATCCTTGGTGACTGATTCAAGTGCTCATCAATGAGTAGTTAGTTCTCAATAATCGACTGATTCAAGTGACATTCAACATTTGTCAGAAACTTCGGTACAATTTGTAGTTATGTTTCGAATCACCTGTGGCTTTTGATGTTATAATTTTTATATCCTTCTTTTCAAGATCTTCACCCTTCTCTTTTTCTAATTACACTTTTTTTATGTCCATTCGAAAAGTTAGTTGCAACTCCTTACTTTGTGCAGGGGCTTCCCCTTTTGGATGTGAAATCATATTTTCATAATTATTCTTCCTGAAATTGAACTGTATTTGTCTTTGCTATTGTTGAGTTCTTTTTTTTTTTCCTTCCATCAATAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTAAGCAAATCTGATTTTCATTGTTGATTTCTTGAAAGAACAAAAAAAAAAAAAAAAAAAAAAAGAAAGAGAAGAAGAAAAGAAGAAAAGAAAAGAAAAGAGAAAACTCTTTTAAGTTACTTTGATTCCCTCGAGCTATTTATTCTTTTCTATTGTTGTTTACTTCAAATAATAATCATAGTGTATTGTTCCTAGTGGAATGGTTTGGTTGCTGCATTATACTCCTATATTAGCGATATCTGTGATGATATATTTCAACTTTTGAGACAAGTGAAATATAATAATATTGTGAAATAATTTGCTGAGAAATTCACTATTATTCTCTGGAGAAAGACAATCATATTTAATTCTGGGAAGATGATTGGATTGCCGGGTTTCCTTTCTTTCCTCTTTTTCCTTGGTTATATGACGTTATCTATGTCAAGTTTGCTGCCATCACTTCCCTCCCAGCCCATTCTTCAGGACCCTCCTAGGTATTAGCTTAGCACAAATGTTAATCTCAATTACCTGCTTGACTACTTTTGATGGGCTGAGCCTTAAGGAGTCGATTCTTTCTTATGTTGTACTATTGATAGACTAAAATATATCACCTCTCCCCAACGTTTTGAGCGTTAAATTTAGTTTCGTTTTGTCCAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGGTAAACTGTATTATTATTTATTTATACTGTTGAAATTGCATGAGTATCTATTTTTTGTTTCTTAATTCCATTGGGTTTATGAGTCAATAAGTTTGATCCGTTTATCCATATTATACCGAGGGATGTGACAATTACTAGAATCCACAATACCTTTACTTATTGGAGCAATCTTAGAAACAAATTAGGTTCTTTATTAGCGAATAATTTCCTTGCTACAATTACAAATACCATATATGGGAATATTAGAGGTTAAGGATTCTGATTCAATCGAAGTGGTATTATCTCGAGAGTTTGGAAATTTAATTGAATACCTGAGGCAAATATAGTAAAATGTTGAGAAGTAATTCAAGGAACCCGAAGACTTTTTTGTTTTGAATATGCAGTTGTGGAGTATGGAGACGTGAATCTCCGACCTTAAGGGAGGAAATACATGTCAATTACTATTGAACTATGCTTTATATTAGAGTACTTTTTTTAGTATGCTCATCCCTGAACGAACAGCTACATAATTACTTGCTTTCATCTCCTTGTATAACCCATGTCTCCTGCTAACAAACTCCTTGGCTAATGATCTTATTATACCCTTAGTTTCCTAAAACAGTTTTGGTCTGGGATTCTTTCAACCAGCATTGTTGTCATTCAAGCCTTACTTTTGCTTTAACATTCTGACGTGGTTAACGAATATCTCAAAAATGCATTTTGTTTGATACACGTCAGCAGATGATTCGGGTTTGATGGAAAGCAAAAACTGACTTGGAGAATTTGTGGAGCTGTACTTAAAGGGATTGACATGTTTCACGCTCGCTATCGATTAAGCATTATAGCAACCTTTCCCCCACCATTTTCAATCGGGTTTTGGGCAATTCGAGCAACAGGGTCATGTCTGACTAGAAGACTGGATATCAAAACAAGGAGGAACATTCTGTGGGTTTAGATAGTTGCATGTAAAAATGTGTATTGCTTTTAGTGTAGGATACCTGTGGTCTTTTATCTATGCTCTCTGATGTTAATGAATTACTGCCATTGTTCATTTCAATTGGTCTGATACTTCTGGAGTTGTATTAATGTAAACAATGAAAAAGGATAGGAAAATAAATGGGATTTAAACAAAAAAAGACCAAAATTTTAT

mRNA sequence

ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGATGATTCGGGTTTGATGGAAAGCAAAAACTGACTTGGAGAATTTGTGGAGCTGTACTTAAAGGGATTGACATGTTTCACGCTCGCTATCGATTAAGCATTATAGCAACCTTTCCCCCACCATTTTCAATCGGGTTTTGGGCAATTCGAGCAACAGGGTCATGTCTGACTAGAAGACTGGATATCAAAACAAGGAGGAACATTCTGTGGGTTTAGATAGTTGCATGTAAAAATGTGTATTGCTTTTAGTGTAGGATACCTGTGGTCTTTTATCTATGCTCTCTGATGTTAATGAATTACTGCCATTGTTCATTTCAATTGGTCTGATACTTCTGGAGTTGTATTAATGTAAACAATGAAAAAGGATAGGAAAATAAATGGGATTTAAACAAAAAAAGACCAAAATTTTAT

Coding sequence (CDS)

ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGATGATTCGGGTTTGA

Protein sequence

MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRASLRTDKDEMCILAKAQIDLELAKMRTMTSQEAAAAAAHAVAEAEAAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV

Homology

[Close]

BLAST of Carg19693 vs. NCBI nr
Match: XP_022922786.1 (telomere repeat-binding factor 1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 197/333 (59.16%), Postives = 197/333 (59.16%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPKKDGNILARSVAVQSEDELPEAKSVSLSSDIKLIAGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRXXXXXXXXXXXXXXXXXXXERTERDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTK 180

Query: 181 ------DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 198
                 DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH
Sbjct: 181 ITSYIEDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 240

[Close]

BLAST of Carg19693 vs. NCBI nr
Match: XP_023553535.1 (telomere repeat-binding factor 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 197/333 (59.16%), Postives = 197/333 (59.16%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPKKDENILARSVAVQSEDELPEAKSVSLSSDIKLIAGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRXXXXXXXXXXXXXXXXXXXERTERDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTK 180

Query: 181 ------DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 198
                 DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH
Sbjct: 181 ITSYIEDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 240

[Close]

BLAST of Carg19693 vs. NCBI nr
Match: XP_023553536.1 (telomere repeat-binding factor 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 197/330 (59.70%), Postives = 197/330 (59.70%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPKKDENILARSVAVQSEDELPEAKSVSLSSDIKLIAGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRXXXXXXXXXXXXXXXXXXXERTERDARYDCHRLDNLIIEAITTLREPGGSNKTKITSY 180

Query: 181 --DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 198
             DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS
Sbjct: 181 IEDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 240

[Close]

BLAST of Carg19693 vs. NCBI nr
Match: XP_022922787.1 (telomere repeat-binding factor 1-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-57
Identity = 193/326 (59.20%), Postives = 194/326 (59.51%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPKKDGNILARSVAVQSEDELPEAKSVSLSSDIKLIAGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRXXXXXXXXXXXXXXXXXXXERTERDARYDCHRLDNLIIEAITTLREPGGSNKTKITSY 180

Query: 181 --DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 195
             DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS
Sbjct: 181 IEDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 240

[Close]

BLAST of Carg19693 vs. NCBI nr
Match: XP_022922785.1 (telomere repeat-binding factor 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-57
Identity = 197/334 (58.98%), Postives = 197/334 (58.98%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPKKDGNILARSVAVQSEDELPEAKSVSLSSDIKLIAGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRXXXXXXXXXXXXXXXXXXXERTERDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTK 180

Query: 181 ------DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 198
                 DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH
Sbjct: 181 ITSYIEDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDH 240

[Close]

BLAST of Carg19693 vs. TAIR10
Match: AT1G49950.3 (telomere repeat binding factor 1)

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-36
Identity = 146/299 (48.83%), Postives = 163/299 (54.52%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT EEE+ALK+GV+KHG GKWRTILKDPEFS VLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNPPPRRPNVR 120

Query: 121 ----------------------------DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRK 180
                                       DQY APPDFKRLLS+KLK+LT+ GKLVKVKRK
Sbjct: 121 LDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180

Query: 181 YRLPPVMP-SSERRSSMLFLDDHQRASL----RTDKDEMCILAKAQIDLELAKMRTMTSQ 197
           YR+P   P SS RR  +      QR S     +TD DE+    ++QID E+A+M++M   
Sbjct: 181 YRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKSMNVH 240

[Close]

BLAST of Carg19693 vs. TAIR10
Match: AT5G67580.1 (Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19
Identity = 72/245 (29.39%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQY------- 60
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL D EFS +L  RSNVDLKD++       
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 61  -W---------------------------------------------------------- 120
            W                                                          
Sbjct: 61  LWGSRKKAKLALKRTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTCASKR 120

Query: 121 ------------------------------------APPDFKRLLSSKLKFLTASGKLVK 141
                                                PP+ KR ++ +LK L+++G LVK
Sbjct: 121 SITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVK 180

[Close]

BLAST of Carg19693 vs. TAIR10
Match: AT3G49850.1 (telomere repeat binding factor 3)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 75/243 (30.86%), Postives = 101/243 (41.56%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQY------- 60
           MGAPK KWT EEE ALKAGV+KHG GKWRTIL DP +S++L  RSNVDLKD++       
Sbjct: 1   MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60

Query: 61  -W-------------------------------------------AP------------- 120
            W                                           AP             
Sbjct: 61  LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPS 120

Query: 121 ------------------------------------PDFKRLLSSKLKFLTASGKLVKVK 142
                                               PD KRL++S+LK+LT  G LVK K
Sbjct: 121 TSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTLVKKK 180

[Close]

BLAST of Carg19693 vs. TAIR10
Match: AT1G72740.1 (Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 74.3 bits (181), Expect = 9.2e-14
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 1  MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQY 54
          MG  K KWT EEE AL AG+ KHG GKW+ IL+DPEF+  L  RSN+DLKD++
Sbjct: 1  MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKW 53

[Close]

BLAST of Carg19693 vs. TAIR10
Match: AT1G17520.1 (Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.5e-13
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQY 54
          MG  K KWT EEE AL AGV KHG GKW+ IL+DPE +  L  RSN+DLKD++
Sbjct: 1  MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKW 53

[Close]

BLAST of Carg19693 vs. Swiss-Prot
Match: sp|Q8VWK4|TRB1_ARATH (Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-35
Identity = 146/299 (48.83%), Postives = 163/299 (54.52%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT EEE+ALK+GV+KHG GKWRTILKDPEFS VLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNPPPRRPNVR 120

Query: 121 ----------------------------DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRK 180
                                       DQY APPDFKRLLS+KLK+LT+ GKLVKVKRK
Sbjct: 121 LDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVKVKRK 180

Query: 181 YRLPPVMP-SSERRSSMLFLDDHQRASL----RTDKDEMCILAKAQIDLELAKMRTMTSQ 197
           YR+P   P SS RR  +      QR S     +TD DE+    ++QID E+A+M++M   
Sbjct: 181 YRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKSMNVH 240

[Close]

BLAST of Carg19693 vs. Swiss-Prot
Match: sp|C0HIA3|SMH6_MAIZE (Single myb histone 6 OS=Zea mays OX=4577 GN=SMH6 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 86/237 (36.29%), Postives = 104/237 (43.88%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKD--------- 60
           MGAPKQ+WT+EEEAAL+AG+ +HG GKWRTILKDPEFSS L  RSNVDLKD         
Sbjct: 1   MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  STSSSRDKAKSALKRIRTIPKNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSK 120

Query: 121 ---------------------------------QYWAPPDFKRLLSSKLKFLTASGKLVK 135
                                            QYW P DF  LLS+KLK L+ SGKL+K
Sbjct: 121 KSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSDFDHLLSAKLKDLSTSGKLIK 180

[Close]

BLAST of Carg19693 vs. Swiss-Prot
Match: sp|Q6WLH3|SMH5_MAIZE (Single myb histone 5 OS=Zea mays OX=4577 GN=SMH5 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 76/237 (32.07%), Postives = 91/237 (38.40%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKD--------- 60
           MGAPKQ+WT+EEEAAL+AGV +HG G WR IL DPE SS L  RSNVDLKD         
Sbjct: 1   MGAPKQRWTSEEEAALRAGVARHGVGNWRMILNDPELSSTLRYRSNVDLKDKWRNMNVIV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TSSSTRDRGRTSTRRTRAAPKNNDQLLAMSTITSEVDDEIVDVKPIVSMSVEGWNTSNSK 120

Query: 121 ----------------------------------QYWAPPDFKRLLSSKLKFLTASGKLV 135
                                             QYW P DF  LLS+KLK+L  SGKL+
Sbjct: 121 KSHSRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSDFDHLLSAKLKYLATSGKLL 180

[Close]

BLAST of Carg19693 vs. Swiss-Prot
Match: sp|Q8W119|SMH4_MAIZE (Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-18
Identity = 50/76 (65.79%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQYWAPPDFK 60
          MGAPKQKWT+EEE AL+AGV KHGAGKWRTI KDPEFS VL  RSN+DLKD+ W    F 
Sbjct: 1  MGAPKQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDK-WRNLSFS 60

Query: 61 R--LLSSKLKFLTASG 75
             L SSKL+    +G
Sbjct: 61 ASGLGSSKLRVPKITG 75

[Close]

BLAST of Carg19693 vs. Swiss-Prot
Match: sp|Q9FJW5|TRB2_ARATH (Telomere repeat-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=TRB2 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 72/245 (29.39%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQY------- 60
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL D EFS +L  RSNVDLKD++       
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 61  -W---------------------------------------------------------- 120
            W                                                          
Sbjct: 61  LWGSRKKAKLALKRTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTCASKR 120

Query: 121 ------------------------------------APPDFKRLLSSKLKFLTASGKLVK 141
                                                PP+ KR ++ +LK L+++G LVK
Sbjct: 121 SITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVK 180

[Close]

BLAST of Carg19693 vs. TrEMBL
Match: tr|A0A1S3BZR5|A0A1S3BZR5_CUCME (telomere repeat-binding factor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494819 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.7e-51
Identity = 186/329 (56.53%), Postives = 190/329 (57.75%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT+EEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPRKDENAVAPSVAAQSEDELAEAKSVSLSLDIKQITGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRKXXXXXXXXXXXXXXXXXXXDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTKITSY 180

Query: 181 --DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 198
             DQYWAPPDFKRLLSSKLKFLTAS KLVKVKRKYRLP V P SERRSSML L+D QRA+
Sbjct: 181 IEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPSVAP-SERRSSMLLLEDQQRAT 240

[Close]

BLAST of Carg19693 vs. TrEMBL
Match: tr|A0A1S3BY21|A0A1S3BY21_CUCME (telomere repeat-binding factor 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494819 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.4e-50
Identity = 186/326 (57.06%), Postives = 190/326 (58.28%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT+EEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPRKDENAVAPSVAAQSEDELAEAKSVSLSLDIKQITGPKRSN 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 VRKXXXXXXXXXXXXXXXXXXXDARYDCHRLDNLIIEAITTLREPGGSNKTKITSYIEDQ 180

Query: 181 YWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRASLRTD 198
           YWAPPDFKRLLSSKLKFLTAS KLVKVKRKYRLP V P SERRSSML L+D QRA++R D
Sbjct: 181 YWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPSVAP-SERRSSMLLLEDQQRATVRAD 240

[Close]

BLAST of Carg19693 vs. TrEMBL
Match: tr|A0A0A0KV07|A0A0A0KV07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000700 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.7e-50
Identity = 184/329 (55.93%), Postives = 190/329 (57.75%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT+EEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPRKDENAVGPSVAAQSEDELAEAKSVSLSSDIKQITGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRKXXXXXXXXXXXXXXXXXXXDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTKITSY 180

Query: 181 --DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 198
             DQYWAPPDFKRLLSSKLKFLTAS KLVKVKRKYRLP V  +SERRSSML L+D Q+AS
Sbjct: 181 IEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPSV-AASERRSSMLLLEDQQKAS 240

[Close]

BLAST of Carg19693 vs. TrEMBL
Match: tr|A0A1S3BZB0|A0A1S3BZB0_CUCME (telomere repeat-binding factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494819 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 186/330 (56.36%), Postives = 190/330 (57.58%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK---------- 60
           MGAPKQKWT+EEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLK          
Sbjct: 1   MGAPKQKWTSEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSREKARLALKRLHAPRKDENAVAPSVAAQSEDELAEAKSVSLSLDIKQITGPKRSN 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VRKXXXXXXXXXXXXXXXXXXXDARYDCHRWEKRLDNLIIEAITTLREPGGSNKTKITSY 180

Query: 181 --DQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRAS 198
             DQYWAPPDFKRLLSSKLKFLTAS KLVKVKRKYRLP V P SERRSSML L+D QRA+
Sbjct: 181 IEDQYWAPPDFKRLLSSKLKFLTASRKLVKVKRKYRLPSVAP-SERRSSMLLLEDQQRAT 240

[Close]

BLAST of Carg19693 vs. TrEMBL
Match: tr|A0A2P6PL55|A0A2P6PL55_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0252701 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 162/298 (54.36%), Postives = 173/298 (58.05%), Query Frame = 0


Query: 1   MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKD--------- 60
           MGAPKQKW  EEEAALKAGVVKHGAGKWRTILKDPEF+ +LYLRSNVDLKD         
Sbjct: 1   MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFARILYLRSNVDLKDKWRNLSVMV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NGWGSRDKCKTVTRRMPQVPKQEDSSMALSAGQSDEEVMDAKPMTASSDSQQVSAPKRSI 120

Query: 121 -------------------------------QYWAPPDFKRLLSSKLKFLTASGKLVKVK 180
                                          QYWAPPDFKRLLS+KLKFLTASGKL+KVK
Sbjct: 121 VRLDDLIMEAITSLKDPGGSNKTTIATYIEEQYWAPPDFKRLLSAKLKFLTASGKLIKVK 180

Query: 181 RKYRLPPVMPSSERR--SSMLFLDDHQRASLRTDKDEMCILAKAQIDLELAKMRTMTSQE 197
           R+YR+ P    SE+R  SSM   +  QRAS + DKD+  +L K QIDLELAKMRTMTSQE
Sbjct: 181 RRYRIAPTPTFSEKRRNSSMFLFEGRQRASPKFDKDDGTMLMKTQIDLELAKMRTMTSQE 240

The following BLAST results are available for this feature:

BLAST of Carg19693 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922786.1	1.7e-58	59.16	telomere repeat-binding factor 1-like isoform X3 [Cucurbita moschata]	[more]
XP_023553535.1	1.7e-58	59.16	telomere repeat-binding factor 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023553536.1	1.5e-57	59.70	telomere repeat-binding factor 1-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022922787.1	4.2e-57	59.20	telomere repeat-binding factor 1-like isoform X4 [Cucurbita moschata]	[more]
XP_022922785.1	4.2e-57	58.98	telomere repeat-binding factor 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg19693 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49950.3	3.8e-36	48.83	telomere repeat binding factor 1	[more]
AT5G67580.1	3.3e-19	29.39	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT3G49850.1	2.8e-18	30.86	telomere repeat binding factor 3	[more]
AT1G72740.1	9.2e-14	62.26	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT1G17520.1	3.5e-13	62.26	Homeodomain-like/winged-helix DNA-binding family protein	[more]

BLAST of Carg19693 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VWK4\|TRB1_ARATH	6.9e-35	48.83	Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV...	[more]
sp\|C0HIA3\|SMH6_MAIZE	3.3e-29	36.29	Single myb histone 6 OS=Zea mays OX=4577 GN=SMH6 PE=2 SV=1	[more]
sp\|Q6WLH3\|SMH5_MAIZE	1.8e-22	32.07	Single myb histone 5 OS=Zea mays OX=4577 GN=SMH5 PE=2 SV=1	[more]
sp\|Q8W119\|SMH4_MAIZE	3.5e-18	65.79	Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1	[more]
sp\|Q9FJW5\|TRB2_ARATH	5.9e-18	29.39	Telomere repeat-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=TRB2 PE=1 SV...	[more]

BLAST of Carg19693 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZR5\|A0A1S3BZR5_CUCME	8.7e-51	56.53	telomere repeat-binding factor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
tr\|A0A1S3BY21\|A0A1S3BY21_CUCME	7.4e-50	57.06	telomere repeat-binding factor 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
tr\|A0A0A0KV07\|A0A0A0KV07_CUCSA	9.7e-50	55.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000700 PE=3 SV=1	[more]
tr\|A0A1S3BZB0\|A0A1S3BZB0_CUCME	2.2e-49	56.36	telomere repeat-binding factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
tr\|A0A2P6PL55\|A0A2P6PL55_ROSCH	4.8e-41	54.36	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR005818	Histone_H1/H5_H15
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19693-RA	Carg19693-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..177
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 5..55 e-value: 2.2E-12 score: 48.5
None	No IPR available	PANTHER	PTHR21717	TELOMERIC REPEAT BINDING PROTEIN	coord: 51..196
None	No IPR available	PANTHER	PTHR21717:SF15	TELOMERE REPEAT-BINDING FACTOR 1	coord: 51..196
None	No IPR available	PANTHER	PTHR21717:SF15	TELOMERE REPEAT-BINDING FACTOR 1	coord: 1..50
None	No IPR available	PANTHER	PTHR21717	TELOMERIC REPEAT BINDING PROTEIN	coord: 1..50
None	No IPR available	CDD	cd11660	SANT_TRF	coord: 6..53 e-value: 2.58044E-13 score: 60.6587
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..33 e-value: 4.4E-6 score: 26.7
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 7..87 score: 12.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..51 score: 9.286
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 2..55

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19693	Cla006440	Watermelon (97103) v1	carwmB0287
Carg19693	Csa4G000700	Cucumber (Chinese Long) v2	carcuB0322
Carg19693	MELO3C018014	Melon (DHL92) v3.5.1	carmeB0297
Carg19693	CSPI04G00200	Wild cucumber (PI 183967)	carcpiB0328
Carg19693	Cucsa.298390	Cucumber (Gy14) v1	carcgyB0346
Carg19693	CmaCh04G004430	Cucurbita maxima (Rimu)	carcmaB0408
Carg19693	CmaCh16G003120	Cucurbita maxima (Rimu)	carcmaB0406
Carg19693	CmoCh04G004730	Cucurbita moschata (Rifu)	carcmoB0403
Carg19693	CmoCh16G003320	Cucurbita moschata (Rifu)	carcmoB0402
Carg19693	Lsi03G010140	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19693	Cp4.1LG14g04610	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19693	CsGy4G000210	Cucumber (Gy14) v2	carcgybB0309
Carg19693	MELO3C018014.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19693	CsaV3_4G000180	Cucumber (Chinese Long) v3	carcucB0328
Carg19693	Cla97C10G193170	Watermelon (97103) v2	carwmbB0302
Carg19693	Bhi11G000928	Wax gourd	carwgoB0381

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19693	Carg08117	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19693	Cucumber (Gy14) v1	carcgyB0344
Carg19693	Cucumber (Gy14) v1	carcgyB0348
Carg19693	Cucurbita maxima (Rimu)	carcmaB0405
Carg19693	Cucurbita maxima (Rimu)	carcmaB0407
Carg19693	Cucurbita moschata (Rifu)	carcmoB0401
Carg19693	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19693	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19693	Wild cucumber (PI 183967)	carcpiB0329
Carg19693	Cucumber (Chinese Long) v2	carcuB0323
Carg19693	Cucumber (Chinese Long) v3	carcucB0329
Carg19693	Melon (DHL92) v3.5.1	carmeB0295
Carg19693	Melon (DHL92) v3.6.1	carmedB0306
Carg19693	Watermelon (Charleston Gray)	carwcgB0287
Carg19693	Watermelon (Charleston Gray)	carwcgB0288
Carg19693	Watermelon (97103) v2	carwmbB0303
Carg19693	Watermelon (97103) v2	carwmbB0305
Carg19693	Wax gourd	carwgoB0383