Carg19609 (gene) Silver-seed gourd

Overview
NameCarg19609
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMYB-related transcription factor
LocationCucurbita_argyrosperma_scaffold_117 : 201967 .. 202931 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGAAATAAAGAGCGACGGTTTGATAGCGGCAACTTACACGGCGGTGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCTTTGGCTCGTTGCGCCGGTAACGGATTCCTCGCCGGAACCCTAACTTATTCCGATTCCTCTGTTTCTAAATTTATCGTTCGCGCATTTTTTTTTTTATTGATGTTGAAATTGGAAAATTGATTCACAGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACGTATTTTATTGATTTCAATGGTAAAATGCGTGAATAATTTTTTAATTTTCAGATGGTCGAAGATTGCCCAGCAATTACCTGGACGAACGGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCGTCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCATCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAGGTCACTCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCCGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGCTGCAGAGTCCGGCTCCTGGATTCTTCAACGAGGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAA

mRNA sequence

ATGGACGGAAATAAAGAGCGACGGTTTGATAGCGGCAACTTACACGGCGGTGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCTTTGGCTCGTTGCGCCGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACCAATTACCTGGACGAACGGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCGTCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCATCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAGGTCACTCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCCGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGCTGCAGAGTCCGGCTCCTGGATTCTTCAACGAGGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAA

Coding sequence (CDS)

ATGGACGGAAATAAAGAGCGACGGTTTGATAGCGGCAACTTACACGGCGGTGACGACGACGGCGACCTGAGACGAGGACCGTGGACGGTGGAGGAGGACATGACTCTCATCAATTACATCGCGAATCACGGCGACGGCCGCTGGAATTCTTTGGCTCGTTGCGCCGGCCTGAAGCGTACCGGAAAAAGCTGCCGATTGCGGTGGCTGAACTATCTCCGGCCGGACCAATTACCTGGACGAACGGATAACGAAATAAAGAACTATTGGAGGACTCGAGTTCAGAAGCACGCAAAGCAGCTCAAATGCGACGTTAACAGTAAACAATTCAAGGATACCATGCGATATCTCTGGATGCCGCGTCTCGTCGAACGGATTCAGGCCGCCGCGTCCACCGCCGTCGACGGAAACCGATCGTACGGATCAGTGGCTCGGCCGGCATCGGCGGCTGTGATGAACAGCGGTAGTGATTTTGTCAGTACTCCACAGGTCACTCCGAGTTATACGTCGGAGAATTCCAGCTCTGGCGGAGGTGGAGGCGGCTCCTCCATGTCCGATTTGACGGATTGCTACAACAATTTCAGTTGTTTTCCGGTGGTTCCGCCGCCGCTGCAGAGTCCGGCTCCTGGATTCTTCAACGAGGAGACATTGGATTTTCAGGCGATGGAGCAGAGTAGTTGCCAGTGGATGGCGGCGGACGGTGGCGTTGACACGTCGGAGAGCTTGTGGAATGCCGCCGACGCCGGTGCCGATTACTTCTGGTTCTCGCAGCAGCAGTTGAATTAA

Protein sequence

MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNSGSDFVSTPQVTPSYTSENSSSGGGGGGSSMSDLTDCYNNFSCFPVVPPPLQSPAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNAADAGADYFWFSQQQLN
Homology
[Close]
BLAST of Carg19609 vs. NCBI nr
Match: XP_022955976.1 (transcription factor MYB78-like [Cucurbita moschata])

HSP 1 Score: 471.1 bits (1211), Expect = 2.5e-129
Identity = 249/290 (85.86%), Postives = 250/290 (86.21%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFD+GNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAV 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ AASTAVDGNRSYGSVARPASAAV
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQVAASTAVDGNRSYGSVARPASAAV 180

Query: 181 MNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAPGF 240
           MNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAPGF
Sbjct: 181 MNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAPGF 240

Query: 241 FNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN 261
           FNEETLDFQAMEQSSCQWMAADGGVDTSES         DYFWFSQQQLN
Sbjct: 241 FNEETLDFQAMEQSSCQWMAADGGVDTSESLWNTADAGADYFWFSQQQLN 290

[Close]
BLAST of Carg19609 vs. NCBI nr
Match: XP_023527593.1 (transcription factor MYB78-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.5 bits (1199), Expect = 6.1e-128
Identity = 258/292 (88.36%), Postives = 260/292 (89.04%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNKERRFD+GNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKERRFDNGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ--AAASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ  AAASTAVDGNRSYGSVARPASA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASTAVDGNRSYGSVARPASA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAP 240
           AVMNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAP
Sbjct: 181 AVMNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPVVPPPLQSPAP 240

Query: 241 GFFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN 261
           GFFN+ETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN
Sbjct: 241 GFFNDETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN 292

[Close]
BLAST of Carg19609 vs. NCBI nr
Match: XP_022979886.1 (transcription factor MYB78-like [Cucurbita maxima])

HSP 1 Score: 440.7 bits (1132), Expect = 3.6e-120
Identity = 242/299 (80.94%), Postives = 245/299 (81.94%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLH-GGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60
           MDGNKERRFD+ NLH GGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR
Sbjct: 1   MDGNKERRFDNVNLHGGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKR 60

Query: 61  TGKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYW 120
           TGKSCRLRWLNYLRPD                              QLPGRTDNEIKNYW
Sbjct: 61  TGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHCRWGNRWSKIAQQLPGRTDNEIKNYW 120

Query: 121 RTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQ--AAASTAVDGNRSYGSVARPAS 180
           RTRVQKHAKQLKCDVNSKQFKDT+RYLWMPRLVERIQ  AAASTAVDGNRSY SVARPAS
Sbjct: 121 RTRVQKHAKQLKCDVNSKQFKDTLRYLWMPRLVERIQVAAAASTAVDGNRSYESVARPAS 180

Query: 181 AAVMNSGSDFVSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFP------VVPP 240
           AA+MNSG DFVSTPQVTPSYTSXXXXXXXXXXXXX SDLTDCYNNFSCFP      V PP
Sbjct: 181 AAMMNSGYDFVSTPQVTPSYTSXXXXXXXXXXXXXMSDLTDCYNNFSCFPVGYGQEVAPP 240

Query: 241 PLQSPAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN 261
           PLQS APGFFNEETLDFQAMEQSSCQWMAADGGVDTSES         DYFWFSQQQLN
Sbjct: 241 PLQSQAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESLWNAPDAGADYFWFSQQQLN 299

[Close]
BLAST of Carg19609 vs. NCBI nr
Match: XP_011651090.1 (PREDICTED: transcription factor MYB108 [Cucumis sativus] >KGN57183.1 hypothetical protein Csa_3G168940 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105
Identity = 214/305 (70.16%), Postives = 221/305 (72.46%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FDSG LHGG+DD DLRRGPWTVEED+ LINYI NHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDADLRRGPWTVEEDIILINYIHNHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA--ASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA  ASTAVDG+RSYGSV     A
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAASVASTAVDGSRSYGSVTPTQPA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTS------XXXXXXXXXXXXXXSDLTDCYNNFSCFP----- 240
            +MN GSDFVSTPQVTPSYTS      XXXXXXX       S+LTDCYNNFSCFP     
Sbjct: 181 LMMNGGSDFVSTPQVTPSYTSXXXXXXXXXXXXXGTQVSSMSELTDCYNNFSCFPSGYGQ 240

Query: 241 --VVPPPLQSPAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFS 261
                  LQSPA GFFNE TLDFQAMEQSSC+WMA DGGV TSES         DY WF 
Sbjct: 241 DAAAAAALQSPAGGFFNEGTLDFQAMEQSSCEWMAGDGGVVTSESLWSGAGDGADYLWFL 300

[Close]
BLAST of Carg19609 vs. NCBI nr
Match: XP_008438973.1 (PREDICTED: transcription factor MYB108 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 211/312 (67.63%), Postives = 220/312 (70.51%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FDSG LHGG+DD DLRRGPWTVEED+ LINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDSDLRRGPWTVEEDIILINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA------AASTAVDGNRSYGSVAR 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA      AAS  VDG+ SYGSV  
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSVAASAVVDGSGSYGSVTP 180

Query: 181 PASAAVMNSGSDFVSTPQVTPSYT------SXXXXXXXXXXXXXXSDLTDCYNNFSC-FP 240
              A +MN GSDFVSTPQVTPSYT       XXXXXXX       S+LTDCYNNFSC FP
Sbjct: 181 TPPALMMNGGSDFVSTPQVTPSYTXXXXXXXXXXXXXXGTQVSSVSELTDCYNNFSCNFP 240

Query: 241 --------VVPPPLQSPAPG-FFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXX 261
                        +QSPA G FFNE TLDFQAM+QSSC+WMA DGGVDTSES        
Sbjct: 241 AGYEQDAGAGAASMQSPAGGLFFNEGTLDFQAMQQSSCEWMAGDGGVDTSES--LWNGAG 300

[Close]
BLAST of Carg19609 vs. TAIR10
Match: AT5G49620.2 (myb domain protein 78)

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-52
Identity = 133/312 (42.63%), Postives = 157/312 (50.32%), Query Frame = 0 

Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD-- 77
           +++ D+RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPD  
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  ------------------------------------------QLPGRTDNEIKNYWRTRV 137
                                                      LPGRTDNEIKNYWRTRV
Sbjct: 81  RGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRV 140

Query: 138 QKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNS 197
           QKHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQAA         S GSV+   S+ V  S
Sbjct: 141 QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAA---------SIGSVS--MSSCVTTS 200

Query: 198 GSDFV---------------STPQ--VTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCF 257
              FV               S P   +TP  +S              SDLT+C  +   +
Sbjct: 201 SDQFVINXXXXNNVDNLALMSNPNGYITPDNSS--------VAVSPVSDLTECQVSSEVW 260

[Close]
BLAST of Carg19609 vs. TAIR10
Match: AT3G06490.1 (myb domain protein 108)

HSP 1 Score: 194.9 bits (494), Expect = 6.2e-50
Identity = 96/153 (62.75%), Postives = 109/153 (71.24%), Query Frame = 0 

Query: 5   KERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSC 64
           K R   + N+   +D+ DL+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSC
Sbjct: 4   KGRSLKNNNM---EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSC 63

Query: 65  RLRWLNYLRPD------------------------------QLPGRTDNEIKNYWRTRVQ 124
           RLRWLNYLRPD                               LPGRTDNEIKNYWRTRVQ
Sbjct: 64  RLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQ 123

Query: 125 KHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA 128
           KHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+
Sbjct: 124 KHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQS 153

[Close]
BLAST of Carg19609 vs. TAIR10
Match: AT1G48000.1 (myb domain protein 112)

HSP 1 Score: 187.6 bits (475), Expect = 9.9e-48
Identity = 95/167 (56.89%), Postives = 109/167 (65.27%), Query Frame = 0 

Query: 22  DLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD------ 81
           ++RRGPWTVEEDM L++YI+ HG+GRWNSL+R AGL RTGKSCRLRWLNYLRPD      
Sbjct: 31  EIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDI 90

Query: 82  ------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 141
                                    LPGRTDNEIKNYWRTRVQKHAK LKCDVNSKQFKD
Sbjct: 91  SLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKD 150

Query: 142 TMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNSGSDFV 159
           T+++LWMPRL+ERI A  S     N      +  A+A    S S+ V
Sbjct: 151 TIKHLWMPRLIERIAATQSVQFTSNHYSPENSSVATATSSTSSSEAV 197

[Close]
BLAST of Carg19609 vs. TAIR10
Match: AT2G47190.1 (myb domain protein 2)

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-43
Identity = 82/140 (58.57%), Postives = 95/140 (67.86%), Query Frame = 0 

Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD-- 77
           ++D D+R+GPWT EED  L+N+++ HGD RWN +AR +GLKRTGKSCRLRWLNYLRPD  
Sbjct: 15  EEDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  ----------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 128
                                        LPGRTDNEIKNYWRTRVQK AK L+CDVNS 
Sbjct: 75  RGNITLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKHLRCDVNSN 134

[Close]
BLAST of Carg19609 vs. TAIR10
Match: AT1G68320.1 (myb domain protein 62)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = 0 

Query: 19  DDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD--- 78
           +D +LRRGPWT+EED  L NYI ++G+GRWN +A+CAGLKRTGKSCRLRWLNYL+PD   
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 79  ---------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQ 127
                                       LPGRTDNEIKNYWRTRVQK A+QL  + NS +
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

[Close]
BLAST of Carg19609 vs. Swiss-Prot
Match: sp|Q9FGY3|MYB78_ARATH (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-52
Identity = 133/298 (44.63%), Postives = 157/298 (52.68%), Query Frame = 0 

Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD-- 77
           +++ D+RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPD  
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  ----------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
                                        LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 138 QFKDTMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNSGSDFV--------- 197
           QFKDTM+YLWMPRLVERIQAA         S GSV+   S+ V  S   FV         
Sbjct: 141 QFKDTMKYLWMPRLVERIQAA---------SIGSVS--MSSCVTTSSDQFVINXXXXNNV 200

Query: 198 ------STPQ--VTPSYTSXXXXXXXXXXXXXXSDLTDCYNNFSCFPV------VPPPLQ 257
                 S P   +TP  +S              SDLT+C  +   + +      V P + 
Sbjct: 201 DNLALMSNPNGYITPDNSS--------VAVSPVSDLTECQVSSEVWKIGQDENLVDPKMT 260

[Close]
BLAST of Carg19609 vs. Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50
Identity = 98/137 (71.53%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 21  GDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD----- 80
           GDLRRGPWTVEED+ L+NYIA HG+GRWNSLAR AGLKRTGKSCRLRWLNYLRPD     
Sbjct: 18  GDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGN 77

Query: 81  -------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 128
                                     LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+QFK
Sbjct: 78  ITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFK 137

[Close]
BLAST of Carg19609 vs. Swiss-Prot
Match: sp|Q2QZJ8|JAMYB_ORYSJ (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.0e-49
Identity = 104/184 (56.52%), Postives = 117/184 (63.59%), Query Frame = 0 

Query: 22  DLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD------ 81
           +LRRGPWTV+ED+TLINYI++HG+GRWN+LAR AGLKRTGKSCRLRWLNYLRPD      
Sbjct: 28  ELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNF 87

Query: 82  ------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 141
                                    LPGRTDNEIKNYWRTRVQKHAKQL CDVNSK+FKD
Sbjct: 88  TAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKD 147

Query: 142 TMRYLWMPRLVERIQAAASTAVD----GNRSYGSVARPASAAVMN--SGSDFVSTPQVTP 170
            M+YLWMPRL ERI A A    D     N     V+    A V N   GS  + T   + 
Sbjct: 148 AMKYLWMPRLAERIHARAGAVDDSGDYSNNDLSCVSGVTMATVANCFDGSPSMVTSSSSD 207

[Close]
BLAST of Carg19609 vs. Swiss-Prot
Match: sp|Q9LDE1|MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-48
Identity = 96/153 (62.75%), Postives = 109/153 (71.24%), Query Frame = 0 

Query: 5   KERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSC 64
           K R   + N+   +D+ DL+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSC
Sbjct: 4   KGRSLKNNNM---EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSC 63

Query: 65  RLRWLNYLRPD------------------------------QLPGRTDNEIKNYWRTRVQ 124
           RLRWLNYLRPD                               LPGRTDNEIKNYWRTRVQ
Sbjct: 64  RLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQ 123

Query: 125 KHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA 128
           KHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+
Sbjct: 124 KHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQS 153

[Close]
BLAST of Carg19609 vs. Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = 0 

Query: 19  DDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD--- 78
           +D +LRRGPWT+EED  L NYI ++G+GRWN +A+CAGLKRTGKSCRLRWLNYL+PD   
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 79  ---------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQ 127
                                       LPGRTDNEIKNYWRTRVQK A+QL  + NS +
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

[Close]
BLAST of Carg19609 vs. TrEMBL
Match: tr|A0A0A0L5Y4|A0A0A0L5Y4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168940 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.1e-105
Identity = 214/305 (70.16%), Postives = 221/305 (72.46%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FDSG LHGG+DD DLRRGPWTVEED+ LINYI NHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDADLRRGPWTVEEDIILINYIHNHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA--ASTAVDGNRSYGSVARPASA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA  ASTAVDG+RSYGSV     A
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAASVASTAVDGSRSYGSVTPTQPA 180

Query: 181 AVMNSGSDFVSTPQVTPSYTS------XXXXXXXXXXXXXXSDLTDCYNNFSCFP----- 240
            +MN GSDFVSTPQVTPSYTS      XXXXXXX       S+LTDCYNNFSCFP     
Sbjct: 181 LMMNGGSDFVSTPQVTPSYTSXXXXXXXXXXXXXGTQVSSMSELTDCYNNFSCFPSGYGQ 240

Query: 241 --VVPPPLQSPAPGFFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFS 261
                  LQSPA GFFNE TLDFQAMEQSSC+WMA DGGV TSES         DY WF 
Sbjct: 241 DAAAAAALQSPAGGFFNEGTLDFQAMEQSSCEWMAGDGGVVTSESLWSGAGDGADYLWFL 300

[Close]
BLAST of Carg19609 vs. TrEMBL
Match: tr|A0A1S3AXP8|A0A1S3AXP8_CUCME (transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103483906 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 7.9e-100
Identity = 211/312 (67.63%), Postives = 220/312 (70.51%), Query Frame = 0 

Query: 1   MDGNKERRFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK+R FDSG LHGG+DD DLRRGPWTVEED+ LINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDSDLRRGPWTVEEDIILINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPD------------------------------QLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPD                              QLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA------AASTAVDGNRSYGSVAR 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA      AAS  VDG+ SYGSV  
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSVAASAVVDGSGSYGSVTP 180

Query: 181 PASAAVMNSGSDFVSTPQVTPSYT------SXXXXXXXXXXXXXXSDLTDCYNNFSC-FP 240
              A +MN GSDFVSTPQVTPSYT       XXXXXXX       S+LTDCYNNFSC FP
Sbjct: 181 TPPALMMNGGSDFVSTPQVTPSYTXXXXXXXXXXXXXXGTQVSSVSELTDCYNNFSCNFP 240

Query: 241 --------VVPPPLQSPAPG-FFNEETLDFQAMEQSSCQWMAADGGVDTSESXXXXXXXX 261
                        +QSPA G FFNE TLDFQAM+QSSC+WMA DGGVDTSES        
Sbjct: 241 AGYEQDAGAGAASMQSPAGGLFFNEGTLDFQAMQQSSCEWMAGDGGVDTSES--LWNGAG 300

[Close]
BLAST of Carg19609 vs. TrEMBL
Match: tr|A0A2I4HR72|A0A2I4HR72_9ROSI (transcription factor MYB108-like OS=Juglans regia OX=51240 GN=LOC109020598 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63
Identity = 161/326 (49.39%), Postives = 177/326 (54.29%), Query Frame = 0 

Query: 18  DDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD-- 77
           +D+ DLRRGPWTV+ED TLINYIANHG+GRWNSLARCAGLKRTGKSCRLRWLNYLRPD  
Sbjct: 15  EDEMDLRRGPWTVDEDFTLINYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  ----------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
                                        LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK
Sbjct: 75  RGNITLEEQLMILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 134

Query: 138 QFKDTMRYLWMPRLVERIQAAA---------STAVDGNRSYGSVARP------------- 197
           QFKDTMRYLWMPRLVERIQAAA         + A++G  S GS                 
Sbjct: 135 QFKDTMRYLWMPRLVERIQAAATAPTTSTAQAVAINGTSSIGSXXXXXXXXXXXXXXXXX 194

Query: 198 ------------ASAAVMNSGS-DFVSTPQVTPSYT--------SXXXXXXXXXXXXXXS 257
                         A   N G  DF  T Q+TPSYT        S              S
Sbjct: 195 XXXDIHAGQMVLPPAGFNNLGQRDFGGTAQITPSYTPENSSTGASSSDSYGAPQIISPVS 254

Query: 258 DLTDCYN-------NFSCFPVVPP---PLQSPAPGFFNEETLDFQAMEQSSCQWMAADGG 261
           DLTD YN       +   FPV  P    L SP+  +FN   +D QAMEQS+ QWM  DG 
Sbjct: 255 DLTDYYNIPVSNNPSQDYFPVGYPDGQSLTSPSGNYFNTGLMDLQAMEQSN-QWM--DGA 314

[Close]
BLAST of Carg19609 vs. TrEMBL
Match: tr|K4AW02|K4AW02_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101246560 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.5e-58
Identity = 143/295 (48.47%), Postives = 170/295 (57.63%), Query Frame = 0 

Query: 8   RFDSGNLHGGDDDGDLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLR 67
           R D+ N +  +DD DLRRGPWTVEED+TL+NYIA+HG+GRWN+LARCAGLKRTGKSCRLR
Sbjct: 12  RGDANNKN--EDDMDLRRGPWTVEEDLTLMNYIAHHGEGRWNTLARCAGLKRTGKSCRLR 71

Query: 68  WLNYLRPD------------------------------QLPGRTDNEIKNYWRTRVQKHA 127
           WLNYLRPD                               LPGRTDNEIKNYWRTRVQKHA
Sbjct: 72  WLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHA 131

Query: 128 KQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNSGSDF 187
           KQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA     G  +   V  P +   ++  +  
Sbjct: 132 KQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAGA---GASTSSEVINPQNIVQIDHNTCV 191

Query: 188 VSTPQVTPSYTSXXXXXXXXXXXXXXSDLTDCYNNF-----SCFPVVPPPLQSPAPGFFN 247
            ++   T S  +              SDLTDC  N+      CF  V   L SP  G+F+
Sbjct: 192 TNSSTATASSDN--------SFGTPVSDLTDCCYNYPQQQQDCFQFVGESLISPT-GYFH 251

Query: 248 EETLDFQAM-------EQSSCQWMAADGGVDTSESXXXXXXXXXDYFWFSQQQLN 261
              L+FQ         +Q++ QWM    G + S++         +  WF QQQLN
Sbjct: 252 -HALEFQGAAASAIDHQQNTTQWM---DGANFSDN-----LWNIEDMWFLQQQLN 283

[Close]
BLAST of Carg19609 vs. TrEMBL
Match: tr|A0A059PRD9|A0A059PRD9_SALMI (MYB-related transcription factor OS=Salvia miltiorrhiza OX=226208 GN=MYB9 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56
Identity = 143/277 (51.62%), Postives = 161/277 (58.12%), Query Frame = 0 

Query: 22  DLRRGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD------ 81
           +LRRGPWTV+ED TLINYIA+HG+GRWNSLAR AGLKRTGKSCRLRWLNYLRPD      
Sbjct: 20  ELRRGPWTVDEDFTLINYIAHHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNI 79

Query: 82  ------------------------QLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 141
                                    LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD
Sbjct: 80  TLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKD 139

Query: 142 TMRYLWMPRLVERIQAAASTAVDGNRSYGSVARPASAAVMNSGSDFVSTPQVTPSYTSXX 201
           TMRYLWMPRLVERIQAAA+ A + + +  ++ RP +++   S   F  TP          
Sbjct: 140 TMRYLWMPRLVERIQAAAAAAPNLDVAV-ALPRPENSSAAASSESF-GTP---------- 199

Query: 202 XXXXXXXXXXXXSDLTDCYNNFSCFPV--------VPPPLQSPAPGFFNEETLDFQAMEQ 261
                       SDLTDCYNN  C+              L SP+ G+FN + LDF     
Sbjct: 200 -----------ASDLTDCYNNQDCYAANNNQFSYGDQLSLSSPS-GYFN-QGLDFGG--- 258

The following BLAST results are available for this feature:
BLAST of Carg19609 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955976.12.5e-12985.86transcription factor MYB78-like [Cucurbita moschata][more]
XP_023527593.16.1e-12888.36transcription factor MYB78-like [Cucurbita pepo subsp. pepo][more]
XP_022979886.13.6e-12080.94transcription factor MYB78-like [Cucurbita maxima][more]
XP_011651090.13.2e-10570.16PREDICTED: transcription factor MYB108 [Cucumis sativus] >KGN57183.1 hypothetica... [more]
XP_008438973.11.2e-9967.63PREDICTED: transcription factor MYB108 [Cucumis melo][more]
BLAST of Carg19609 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49620.25.1e-5242.63myb domain protein 78[more]
AT3G06490.16.2e-5062.75myb domain protein 108[more]
AT1G48000.19.9e-4856.89myb domain protein 112[more]
AT2G47190.14.3e-4358.57myb domain protein 2[more]
AT1G68320.11.4e-3853.62myb domain protein 62[more]
BLAST of Carg19609 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FGY3|MYB78_ARATH2.2e-5244.63Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1[more]
sp|Q10MB4|MYB2_ORYSJ1.2e-5071.53Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ... [more]
sp|Q2QZJ8|JAMYB_ORYSJ5.0e-4956.52Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=... [more]
sp|Q9LDE1|MY108_ARATH1.1e-4862.75Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1[more]
sp|Q9C9G7|MYB62_ARATH2.6e-3753.62Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1[more]
BLAST of Carg19609 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5Y4|A0A0A0L5Y4_CUCSA2.1e-10570.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168940 PE=4 SV=1[more]
tr|A0A1S3AXP8|A0A1S3AXP8_CUCME7.9e-10067.63transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103483906 PE=4 SV=1[more]
tr|A0A2I4HR72|A0A2I4HR72_9ROSI2.0e-6349.39transcription factor MYB108-like OS=Juglans regia OX=51240 GN=LOC109020598 PE=4 ... [more]
tr|K4AW02|K4AW02_SOLLC7.5e-5848.47Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101246560 PE=4 SV=1[more]
tr|A0A059PRD9|A0A059PRD9_SALMI1.8e-5651.62MYB-related transcription factor OS=Salvia miltiorrhiza OX=226208 GN=MYB9 PE=2 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19609-RACarg19609-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 24..74
e-value: 6.6E-15
score: 65.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..72
e-value: 1.4E-16
score: 60.2
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 27..72
e-value: 1.22079E-12
score: 59.5114
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 22..75
e-value: 2.0E-17
score: 64.8
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 76..115
e-value: 1.1E-5
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..181
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 77..258
NoneNo IPR availablePANTHERPTHR10641:SF743MYB TRANSCRIPTION FACTOR-RELATEDcoord: 77..258
NoneNo IPR availablePANTHERPTHR10641:SF743MYB TRANSCRIPTION FACTOR-RELATEDcoord: 13..75
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 13..75
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 20..76
score: 21.873
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 23..89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19609Cla021810Watermelon (97103) v1carwmB0269
Carg19609Csa3G168940Cucumber (Chinese Long) v2carcuB0306
Carg19609MELO3C006728Melon (DHL92) v3.5.1carmeB0280
Carg19609CSPI03G15130Wild cucumber (PI 183967)carcpiB0310
Carg19609Cucsa.252400Cucumber (Gy14) v1carcgyB0329
Carg19609CmaCh06G015750Cucurbita maxima (Rimu)carcmaB0393
Carg19609CmaCh14G015750Cucurbita maxima (Rimu)carcmaB0391
Carg19609CmoCh14G016090Cucurbita moschata (Rifu)carcmoB0388
Carg19609CmoCh06G015690Cucurbita moschata (Rifu)carcmoB0390
Carg19609Lsi05G014070Bottle gourd (USVL1VR-Ls)carlsiB253
Carg19609Cp4.1LG08g05380Cucurbita pepo (Zucchini)carcpeB0396
Carg19609Cp4.1LG03g11950Cucurbita pepo (Zucchini)carcpeB0395
Carg19609CsGy3G015280Cucumber (Gy14) v2carcgybB0294
Carg19609MELO3C006728.2Melon (DHL92) v3.6.1carmedB0292
Carg19609CsaV3_3G015330Cucumber (Chinese Long) v3carcucB0309
Carg19609Cla97C05G088320Watermelon (97103) v2carwmbB0287
Carg19609Bhi01G000797Wax gourdcarwgoB0365
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19609Carg25647Silver-seed gourdcarcarB317
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19609Silver-seed gourdcarcarB079
Carg19609Silver-seed gourdcarcarB316
Carg19609Cucurbita maxima (Rimu)carcmaB0392
Carg19609Cucurbita moschata (Rifu)carcmoB0389
Carg19609Cucurbita pepo (Zucchini)carcpeB0393
Carg19609Bottle gourd (USVL1VR-Ls)carlsiB252
Carg19609Watermelon (Charleston Gray)carwcgB0271
Carg19609Wax gourdcarwgoB0364