Carg19598 (gene) Silver-seed gourd

Overview
NameCarg19598
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionproteasome assembly chaperone 4
LocationCucurbita_argyrosperma_scaffold_117 : 79309 .. 81074 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCTTTGTTTAGGTTCCTAAAATGTTACATCAAGCTCAAATTTCAAAAGACGAACAGACACTTGCTAGTCCATCAAGTAGCAACAATGATGACCACCACCTTGATGGTGGTAGTATTCAGGTTACTTGCTTCAGTGAAGCCATAAACGATGTCCCCATCCATTTTCAGATAATACGTCTCCCTAAGCAGGTTTTCCATGGCTTTTCCAACATTCCTTCGGATTTTTCCATTTGAGTTACATTTTCAGTACAGCCCAATTTTTCGGAATCAGCGTGTTAAATATTCCAACGCTTAGTTTCTTGATGTTTGTTTCTGTCATATTTGTTTTGTTTTTATAATTTCATTTTAAATATGTAGATATATGCATGGATTGGCTGCAATTCTGCAAAATTTGGGAATTTGTATGCAGCTGCCCCCACACGGCCTGTAAGTTGTTCTTTAGTTTGGTACGAATGACATATAAGCGAAGCTCTTCCCCCCTTTTTAGAATTTTTCAAATCTTGCCATATACTTGTAAATCTTAGCTACTGAATCGAATTGGCTAATAATCCTGATCTCTCAGTCATTGCTATTTTGCAACTGAATTTTTGCAGAACAATACGGTGAGCGTTACATCCTTACTTGGAGGTTCATCTGATAATACAGGATCTACCATGGCTCGTCGGTTAGGTAATACGTGAATCTAGTGTTGACGTCTGAATACTTAAGATGTCATGTCGTCTCTTAGTCGTTCTGATACATTTGTTTCTCTTTTCTTAGTGCTAAAGACCGGTCTAAATATCATGTTGGCTAGCAATATTCCAAAAAACAGCCCCATTATTGAGGTTTGATGATGCTCCTCTTCCTCCCTGTTTTTCTAATAGATGAATAATGCATGGGATGATTGGTCTATGAAAGAACTATGCTAGAGGTATTCAAATTTGGTTACCCCTAGTACGTTGCCTCTGTTATCTACAAAGTGAAAAATATAGTTTTGTAAACAAAAAACAATAATGAAACTAAAACCGTGCTCGATAACGATTTCGTATTTAGTTTTTTGCTTTTGAAATTTACGTTGTTTTCTCTCGAAAAAACAAAAATTTTAAAACCACTTTTTTCACTTTTTAGAAAACTAAAAACTAAATAGGTTCATGCTTTCAAGTTTCAGATTCCTACTTAGCTGTTATGTTTGTTTCGATCATTTTAGGTAGCTGCTGAAAAGATGTTAGTGCAAAAACTGGTCTCTTTAGGGCTCATTAGGCCTAAATCAGAAGGGCCATCTACATAATAATTGGTACTCCTGTTTAATCTTCTTTGCAAGAACCAGTCGTGAAAGACGTCTAGGGTTCTAAGTTATTAAGTTTTCGACTTTGTAAGACTTTCGAGGAGGAGGACGTCCTCAAACATACCGAACCCTTACTATCAAGGTACTCGATGAGGCTCTCTTTTACTTCATCTTGCTTAGATATTGATCAAGAACATCATTCATGTTTCATGTTTCATGCTTCATGCTTCATGTTTCGTGTTTCGTGTTTTGATTCGTTTTTATTGAGCTTCCTCATTAATGTTTGTAAACTATATACTTATCTTAACTTTATTGTTCTTGGGCTGAATTTGGAATGAAATTTGAATGATTATAGTATTTTATCAAGTTTATGTAACATAGAATTTCTCTAACTATTTTACAAAATTTCATTCATTGGACTCATATGATTTATAAGGTAAATTCTCTTTTGACGTGTAAACTTCTTTAATAGCAAATAATAATAATGAAGTTGGTCAAA

mRNA sequence

AGTTTCTTTGTTTAGGTTCCTAAAATGTTACATCAAGCTCAAATTTCAAAAGACGAACAGACACTTGCTAGTCCATCAAGTAGCAACAATGATGACCACCACCTTGATGGTGGTAGTATTCAGGTTACTTGCTTCAGTGAAGCCATAAACGATGTCCCCATCCATTTTCAGATAATACGTCTCCCTAAGCAGATATATGCATGGATTGGCTGCAATTCTGCAAAATTTGGGAATTTGTATGCAGCTGCCCCCACACGGCCTAACAATACGGTGAGCGTTACATCCTTACTTGGAGGTTCATCTGATAATACAGGATCTACCATGGCTCGTCGGTTAGTGCTAAAGACCGGTCTAAATATCATGTTGGCTAGCAATATTCCAAAAAACAGCCCCATTATTGAGGTAGCTGCTGAAAAGATGTTAGTGCAAAAACTGGTCTCTTTAGGGCTCATTAGGCCTAAATCAGAAGGGCCATCTACATAATAATTGGTACTCCTGTTTAATCTTCTTTGCAAGAACCAGTCGTGAAAGACGTCTAGGGTTCTAAGTTATTAAGTTTTCGACTTTGTAAGACTTTCGAGGAGGAGGACGTCCTCAAACATACCGAACCCTTACTATCAAGGTACTCGATGAGGCTCTCTTTTACTTCATCTTGCTTAGATATTGATCAAGAACATCATTCATGTTTCATGTTTCATGCTTCATGCTTCATGTTTCGTGTTTCGTGTTTTGATTCGTTTTTATTGAGCTTCCTCATTAATGTTTGTAAACTATATACTTATCTTAACTTTATTGTTCTTGGGCTGAATTTGGAATGAAATTTGAATGATTATAGTATTTTATCAAGTTTATGTAACATAGAATTTCTCTAACTATTTTACAAAATTTCATTCATTGGACTCATATGATTTATAAGGTAAATTCTCTTTTGACGTGTAAACTTCTTTAATAGCAAATAATAATAATGAAGTTGGTCAAA

Coding sequence (CDS)

ATGTTACATCAAGCTCAAATTTCAAAAGACGAACAGACACTTGCTAGTCCATCAAGTAGCAACAATGATGACCACCACCTTGATGGTGGTAGTATTCAGGTTACTTGCTTCAGTGAAGCCATAAACGATGTCCCCATCCATTTTCAGATAATACGTCTCCCTAAGCAGATATATGCATGGATTGGCTGCAATTCTGCAAAATTTGGGAATTTGTATGCAGCTGCCCCCACACGGCCTAACAATACGGTGAGCGTTACATCCTTACTTGGAGGTTCATCTGATAATACAGGATCTACCATGGCTCGTCGGTTAGTGCTAAAGACCGGTCTAAATATCATGTTGGCTAGCAATATTCCAAAAAACAGCCCCATTATTGAGGTAGCTGCTGAAAAGATGTTAGTGCAAAAACTGGTCTCTTTAGGGCTCATTAGGCCTAAATCAGAAGGGCCATCTACATAA

Protein sequence

MLHQAQISKDEQTLASPSSSNNDDHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPKNSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST
Homology
[Close]
BLAST of Carg19598 vs. NCBI nr
Match: XP_022955597.1 (proteasome assembly chaperone 4 [Cucurbita moschata] >XP_022955600.1 proteasome assembly chaperone 4 [Cucurbita moschata] >XP_022955601.1 proteasome assembly chaperone 4 [Cucurbita moschata] >XP_022955602.1 proteasome assembly chaperone 4 [Cucurbita moschata])

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70
Identity = 146/152 (96.05%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           MLHQAQISK+EQTLA PS XXXXX  LDGG IQVTCFSEAINDVPIHFQIIRLPKQIYAW
Sbjct: 1   MLHQAQISKEEQTLAIPSXXXXXXXXLDGGGIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 153
           NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST
Sbjct: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 152

[Close]
BLAST of Carg19598 vs. NCBI nr
Match: XP_023526532.1 (proteasome assembly chaperone 4 [Cucurbita pepo subsp. pepo] >XP_023526535.1 proteasome assembly chaperone 4 [Cucurbita pepo subsp. pepo] >XP_023526536.1 proteasome assembly chaperone 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 2.3e-63
Identity = 136/152 (89.47%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           ML+QAQISK+EQ       XXXXX       IQVTCFSEAINDVPIHFQIIRLPKQIYAW
Sbjct: 1   MLYQAQISKEEQXXXXXXXXXXXXXXXXXXGIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 153
           NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST
Sbjct: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 152

[Close]
BLAST of Carg19598 vs. NCBI nr
Match: XP_008448802.1 (PREDICTED: proteasome assembly chaperone 4 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 8.9e-63
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           MLH+ QISK+EQ LASPSS      +LDGG ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHEGQISKEEQPLASPSS-SNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGS+MARRLVLKTGLNI+LASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRLVLKTGLNIILASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPS 152
           NSP+IEVAAEK+LVQKLV+LG IRPKSEGPS
Sbjct: 121 NSPMIEVAAEKVLVQKLVTLGYIRPKSEGPS 150

[Close]
BLAST of Carg19598 vs. NCBI nr
Match: XP_022979967.1 (proteasome assembly chaperone 4 [Cucurbita maxima] >XP_022979968.1 proteasome assembly chaperone 4 [Cucurbita maxima] >XP_022979970.1 proteasome assembly chaperone 4 [Cucurbita maxima] >XP_022979971.1 proteasome assembly chaperone 4 [Cucurbita maxima])

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 134/152 (88.16%), Postives = 137/152 (90.13%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           ML+QAQISK+EQ       XXXXX       IQVTCFSEAINDVPIHFQIIRLPKQIYAW
Sbjct: 1   MLYQAQISKEEQXXXXXXXXXXXXXXXXXXGIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNN VSVTSLLGGSSDNTGS+MARRLVLKTGLNIMLASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNMVSVTSLLGGSSDNTGSSMARRLVLKTGLNIMLASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 153
           NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST
Sbjct: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 152

[Close]
BLAST of Carg19598 vs. NCBI nr
Match: XP_004147905.1 (PREDICTED: proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 PREDICTED: proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653670.1 PREDICTED: proteasome assembly chaperone 4 [Cucumis sativus] >KGN54334.1 hypothetical protein Csa_4G304800 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59
Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           MLH+ QISK+EQ+ ASPS+      +LD   ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHEGQISKEEQSFASPSNSNSNG-NLD--DVRVTCFSEAINDVPIHFQIICLSKQIYVW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MARRLVLKTGLNI+LASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRLVLKTGLNIILASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPS 152
           NSPIIEVAAEK+LVQKLV+LG +RPK EGPS
Sbjct: 121 NSPIIEVAAEKVLVQKLVTLGYVRPKPEGPS 148

[Close]
BLAST of Carg19598 vs. TAIR10
Match: AT1G48170.1 (unknown protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43
Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 28  DGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWIGCNSAKFGNLYAAAPTRPNNTVSVTS 87
           DG  ++V+CF+E  +DV I FQIIRL KQIY W+GCNSAKFG+LYAAA TRP+NTVSVTS
Sbjct: 30  DGNGVKVSCFTEVFDDVTIQFQIIRLAKQIYVWVGCNSAKFGSLYAAASTRPSNTVSVTS 89

Query: 88  LLGGSSDNTGSTMARRLVLKTGLNIMLASNIPKNSPIIEVAAEKMLVQKLVSLGLIRPK 147
           +LGG+SDNTGS +ARRLVLKTGLNI+LA NIPKN+P++E  AEK+L++KL+ LG    K
Sbjct: 90  VLGGTSDNTGSGIARRLVLKTGLNIILACNIPKNNPLLEAKAEKVLIRKLIDLGYTMSK 148

[Close]
BLAST of Carg19598 vs. Swiss-Prot
Match: sp|Q5JS54|PSMG4_HUMAN (Proteasome assembly chaperone 4 OS=Homo sapiens OX=9606 GN=PSMG4 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 29/109 (26.61%), Postives = 56/109 (51.38%), Query Frame = 0 

Query: 29  GGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWIGCNSAKFGNLYAAAPTRPNNTVSVTSL 88
           GG + +  FS  + +  +HF ++RL   ++ W+G  +    NL  A  +R ++    TSL
Sbjct: 9   GGDVSLHNFSARLWEQLVHFHVMRLTDSLFLWVGA-TPHLRNLAVAMCSRYDSIPVSTSL 68

Query: 89  LGGSSDNTGSTMARRLVLKTGLNIMLASNIPKNSPIIEVAAEKMLVQKL 138
           LG +SD T + +A+RL  KT   + ++ N+        +  E  + +++
Sbjct: 69  LGDTSDTTSTGLAQRLARKTNKQVFVSYNLQNTDSNFALLVENRIKEEM 116

[Close]
BLAST of Carg19598 vs. Swiss-Prot
Match: sp|P0C7N9|PSMG4_MOUSE (Proteasome assembly chaperone 4 OS=Mus musculus OX=10090 GN=Psmg4 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04
Identity = 26/101 (25.74%), Postives = 50/101 (49.50%), Query Frame = 0 

Query: 37  FSEAINDVPIHFQIIRLPKQIYAWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNT 96
           FS  + +  +HF ++RL   ++ W+G  +    NL  A  +R +     TSL G +SD T
Sbjct: 17  FSARLWEQLVHFHVMRLTDSLFLWVGA-TPHLRNLAVAMCSRYDPIPVCTSLFGDTSDTT 76

Query: 97  GSTMARRLVLKTGLNIMLASNIPKNSPIIEVAAEKMLVQKL 138
            + +A+RL  KT   + ++ N+        +  E  + +++
Sbjct: 77  STGLAQRLARKTSKQVFVSYNLSNTDSNFTLLVENRIKEEM 116

[Close]
BLAST of Carg19598 vs. TrEMBL
Match: tr|A0A1S3BJY7|A0A1S3BJY7_CUCME (proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.9e-63
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           MLH+ QISK+EQ LASPSS      +LDGG ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHEGQISKEEQPLASPSS-SNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGS+MARRLVLKTGLNI+LASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRLVLKTGLNIILASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPS 152
           NSP+IEVAAEK+LVQKLV+LG IRPKSEGPS
Sbjct: 121 NSPMIEVAAEKVLVQKLVTLGYIRPKSEGPS 150

[Close]
BLAST of Carg19598 vs. TrEMBL
Match: tr|A0A0A0KZU0|A0A0A0KZU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-59
Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 0 

Query: 1   MLHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60
           MLH+ QISK+EQ+ ASPS+      +LD   ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHEGQISKEEQSFASPSNSNSNG-NLD--DVRVTCFSEAINDVPIHFQIICLSKQIYVW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPK 120
           IGCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MARRLVLKTGLNI+LASNIPK
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRLVLKTGLNIILASNIPK 120

Query: 121 NSPIIEVAAEKMLVQKLVSLGLIRPKSEGPS 152
           NSPIIEVAAEK+LVQKLV+LG +RPK EGPS
Sbjct: 121 NSPIIEVAAEKVLVQKLVTLGYVRPKPEGPS 148

[Close]
BLAST of Carg19598 vs. TrEMBL
Match: tr|A0A251QVI1|A0A251QVI1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G108100 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 8.2e-49
Identity = 100/151 (66.23%), Postives = 122/151 (80.79%), Query Frame = 0 

Query: 2   LHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWI 61
           +  AQISKD++    P++     +  D G +Q+TCF+E +ND   HFQI+RLPKQIYAWI
Sbjct: 15  MSSAQISKDKE----PAAPSYYSNEDDAGGVQITCFTEVVNDTTFHFQIMRLPKQIYAWI 74

Query: 62  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPKN 121
           GCNSAK G+LYAAAP RPN+TV VTS+LGG+SDNTGS++ARRLVLKTGLNI+LA NIPKN
Sbjct: 75  GCNSAKLGHLYAAAPMRPNSTVGVTSILGGASDNTGSSIARRLVLKTGLNIILACNIPKN 134

Query: 122 SPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 153
           SP+IE  AEK+LV KL+SLG  RPKSEG S+
Sbjct: 135 SPMIEADAEKLLVLKLISLGYTRPKSEGLSS 161

[Close]
BLAST of Carg19598 vs. TrEMBL
Match: tr|A0A2N9H916|A0A2N9H916_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35971 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 98/151 (64.90%), Postives = 116/151 (76.82%), Query Frame = 0 

Query: 2   LHQAQISKDEQTLASPSSXXXXXHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWI 61
           L  AQ+ K++Q     S         DGG +Q+TCFSE  NDV +HFQI+R PKQIY WI
Sbjct: 15  LSSAQVFKEKQ---QASVNHKDDEVGDGGGMQITCFSEVFNDVSLHFQILRFPKQIYVWI 74

Query: 62  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRLVLKTGLNIMLASNIPKN 121
           GCNSAK G LYAAAPTRP +TVSVTS+LGG+SDNTGS +ARRLVLKTGLNI+LA NIPKN
Sbjct: 75  GCNSAKLGRLYAAAPTRPKDTVSVTSILGGASDNTGSGIARRLVLKTGLNIILACNIPKN 134

Query: 122 SPIIEVAAEKMLVQKLVSLGLIRPKSEGPST 153
           SP++E  AEKML+QKL+ LG  R K+EG S+
Sbjct: 135 SPMLEADAEKMLIQKLIQLGYTRAKAEGSSS 162

[Close]
BLAST of Carg19598 vs. TrEMBL
Match: tr|A0A2P4IHV2|A0A2P4IHV2_QUESU (Proteasome assembly chaperone 4 OS=Quercus suber OX=58331 GN=CFP56_19734 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 88/125 (70.40%), Postives = 107/125 (85.60%), Query Frame = 0 

Query: 28  DGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAWIGCNSAKFGNLYAAAPTRPNNTVSVTS 87
           DGG +Q+TCFSE +NDV +HFQI+RL KQIY WIGC+SAK G +YAAAPTRP + +SVTS
Sbjct: 27  DGGGVQITCFSEVVNDVALHFQILRLLKQIYVWIGCDSAKLGRIYAAAPTRPKDMISVTS 86

Query: 88  LLGGSSDNTGSTMARRLVLKTGLNIMLASNIPKNSPIIEVAAEKMLVQKLVSLGLIRPKS 147
           +LGG+SDNTG+ +ARRLVLKTGLNI+LA NIPKNSP++E  AEKMLVQKL+ LG  R K+
Sbjct: 87  ILGGASDNTGAGIARRLVLKTGLNIILACNIPKNSPMLEAEAEKMLVQKLIQLGYTRAKA 146

Query: 148 EGPST 153
           EG S+
Sbjct: 147 EGSSS 151

The following BLAST results are available for this feature:
BLAST of Carg19598 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955597.12.6e-7096.05proteasome assembly chaperone 4 [Cucurbita moschata] >XP_022955600.1 proteasome ... [more]
XP_023526532.12.3e-6389.47proteasome assembly chaperone 4 [Cucurbita pepo subsp. pepo] >XP_023526535.1 pro... [more]
XP_008448802.18.9e-6384.77PREDICTED: proteasome assembly chaperone 4 [Cucumis melo][more]
XP_022979967.13.4e-6288.16proteasome assembly chaperone 4 [Cucurbita maxima] >XP_022979968.1 proteasome as... [more]
XP_004147905.17.8e-5980.79PREDICTED: proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 PRE... [more]
BLAST of Carg19598 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48170.11.5e-4368.91unknown protein[more]
BLAST of Carg19598 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q5JS54|PSMG4_HUMAN1.8e-0626.61Proteasome assembly chaperone 4 OS=Homo sapiens OX=9606 GN=PSMG4 PE=1 SV=2[more]
sp|P0C7N9|PSMG4_MOUSE2.2e-0425.74Proteasome assembly chaperone 4 OS=Mus musculus OX=10090 GN=Psmg4 PE=1 SV=1[more]
BLAST of Carg19598 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BJY7|A0A1S3BJY7_CUCME5.9e-6384.77proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=... [more]
tr|A0A0A0KZU0|A0A0A0KZU0_CUCSA5.2e-5980.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1[more]
tr|A0A251QVI1|A0A251QVI1_PRUPE8.2e-4966.23Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G108100 PE=4 SV=1[more]
tr|A0A2N9H916|A0A2N9H916_FAGSY1.7e-4664.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35971 PE=4 SV=1[more]
tr|A0A2P4IHV2|A0A2P4IHV2_QUESU1.2e-4470.40Proteasome assembly chaperone 4 OS=Quercus suber OX=58331 GN=CFP56_19734 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19598-RACarg19598-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 46..118
e-value: 2.0E-18
score: 66.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR33559FAMILY NOT NAMEDcoord: 27..142