Carg19410 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19410
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription termination factor family protein
Location	Cucurbita_argyrosperma_scaffold_096 : 473174 .. 477740 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAGAACAAAGCCATAATGTTATCTTCTTCATCTCTATACTCCAACCCACATCCCCACCTCCGTCTTCTTCATTTCCGCCCTCCCAATCCTCTCTCCAATGTCGTCCTCCACCTCCCCTCCAACCAGAAACCCAACGCCACCGTCGCCTCCGCTGATCTCCGCCGCAACAATCCGACGGAAAAACCATCCACCAACGTCTCCGATCCTATCCAGCCGGAACCCCGCAAACACAACTCCAAATCCGCCGCCCTTGTTAACCAGTACCTATCATCCGGCGAATCCCCAAATCCACAAAACCTAGAACCCCCTTTGCCCGAAGAAGAGAAAGTGAAGCTTCTCGAACTCTCGCTTGTGAGAAAACGAACCCCTCAATTTCCTGGATCGATTTATGTTCAATCCCCGAGTGATTCCGATGTGGGTTCTTCTCTTCCTCCCCTGCAATCTCTGTTTCGAAATGCAGGAAGTGAGTTCGATGGCGAAGATGACCGGAAGATAATAAGGAGAGCTCTAGAGATTCGCCGGAAGGTAACCTCCGAGATCTTCAAGGAGGCGATGCGGAAAGGGAAATTTGGAATCACTTACACCGATAATCTCCTTGGTTGGTTGTCTGATTTCATCGATTTTGTAATGATTCAAGCCGCGTCGATGAAGCAGTTGCCTGAATTTGCTCATTTGTCGTTCAATCTTCGTGCAAAGACCGTCATTGAAGAATCAAATGTGGTACCTCTTATCAGGTAATGGCCTATCTCCAAGTAGTTCAAAATCTTTAAGCAATTTGCACCTTACCAAACTCACCCTTCTTCTTACAGGTGGTTGAAGCATAACTCATTGTCATATCCACAGATAGGTAAGCTCATATGCATGTCGAAGGGAAAGCTTGAATCCATTAGACGTCTTGTGGAATGGCTGAAGGGGATTCATGTAAAGGGAGGATATCTTGGACTTACACTCACTAAAGCTGGAGGGAATATATTGGAGCGCAGCAATGATGAACTAGATGAAATTGTGAGCTACTTAGAGAGTAATGGAGTTAGAATGGTTTGGATTGGCTTTGTTATGAGTCGATGTCCTTATTTGCTGTCTTACAGTTTGGAAGAACTGAAAAGTCGTGTGGAGTTCTTCTTGAATATGGGTATGAATGAGAAAGACTTTGGTACAATGGTCTTTGATTTCCCTAAGGTGCTTGGTCAGTATAGTCTTGAAGATATGAACCAAAAGGTATGTTCTCTTAAATTGTAACTTAGCATTTGAATTTTGAGCATGGTTTCTACTTAATCCATGAGGAGAGGGAAGTTTGGATGATAATGATCGAAGGATTTCTAGTTGTAGTAATGTTTTTGTAACGGCTCAAGCCCACCGTTATCAGATATTGTCTTCTTTGGGTTCTCCATTTCGGGCTTCCCTTCAATGTTTCTAGAACGCGTCTGCTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTTATTCTCCTCCCCAACCGGTGTAGGATTTCACAATCTACCCCTCTTTGGGGCTCAATGTCCTCGCTGGCACTCATTCCCTTCTCCAATTGATGTGGGACTCTCCAATCCACTCACTGACACATCGCCCGGTATCTGGATCTGATACCATTTGTAACAACCCAAGGCCACTGCTAGCATATATTTTTCTTTTTGGGCTTTCCCTTTCGGGCTTCTCCTCAAGGTTTTTAAAATGTGACTACCAGGGAGCGGTTTTCACACCCTTATAAAGAATGTTTCATTGTCGTTCTCCTAATCAACTGATGTGGGATCTCACAGTATTAATTTCTGTACCAGCTCATTTTCTTGTCTTTGCTTTCTATCATCTCCAAGCAGTGGGAATAATGTAACTTAAGATTTTCTGTTCTATAACATGTAGTGATATATGAATCACTTTTCTGATCGGGTATTCGCTAACATGAGGTGCTAGTCGTCGTGTTCATCCAGGTCAACTATTTAAAGGAGTTTGGGCTTGAGATTGAGGATATAGGCAGATTACTGGCATACAAACCACAGTTGATGAATGGTAGCATTGAGGGTAAATGGAAGCCTCTTGTTAAGTACTTCTACTATCTTGGAATTTCCAAAGAGGGTTTGAGGAGGATGCTTACAATAAAGCCAGTGGTTTTCTGCCTTGATCTGGAGACCATCATTGTGCCAAAGGTATTCCTTTCATGTTTCATGTCAATATTTTACGACAAAAGATGAACTGAGTAATGAAGAACGAACGAATATCTATGATTAAGATGTGTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGATGAAGGTGCAATTCTTCAGAGACATAGGAGTTCGAGATGACGGGATTAGTAACATGCTTGTGAAGTTTCCATCATTATTGACATTCAGCCTGTACAAGAAAATCCGTCCTGTTGTGAGTTTATTAACCTCTGTATCCTGTCTTTATATCCTATAGTTCAGATTTATTTGTTGAATTGAACCCGAAGAAAGCATTCCCATATAAAGACGTTGGGAAGTTATCTCCATGGTATCTTTATGGTGTGTGTATCCTTTGGTGAGATCCCATATTGGTTGGAGAGGGAAACGAAGCATTCCTTATAAGAGTGTGGAAATCTCTCCCTAGCAGACGCGTTTTAAAACTGAGGGGAAGCCTAGAATGAAAAGCCCAAAGCGGACAATATCTAAATTATCTGAAATATTTGCTAGCGGTAGGGCTGGGAATGTTACAACATCATTATGTTACAGACGACTTTTGGTATAAAGGAAGTTATTGCATAAAAGTGCTGTGGCAATAACAATGTGGATTGCCAGGGTTCAAGTGGGTGCGAAAAACTTTGAGATAGGGGCGAGATGAGCTCCTTTTCTCTATGATATTGCAATATAATCTCAAGAACAAGTTCATATGCTATCAACAAATGTACACTATAACACCCGAGCGAGATGGTAGAGAGTGCCTGAAATGTTTAGATATTTGGACTTCCTTCGTCCTACTTCGTGTTACTTGGTTCTATTGGACGGTTGATCATATCCATTTTTCACATTGTGGGTGACAAGTAAGACATTATCTCATGTCAAATGTCAAATATGTTGAATGTTTGATGGTTTTTCTTTTCCAAGAACACAATATTCTCTCTTCTCTACTACTATAAGAGAAAATTGAAAACTTTCATTAAGATATGCTCAACAGTCTTTGACTGTAAAACCATGCAGGTCATATTCTTGATGACTAAAGCAGGAGTCAGGGAGAAAGACATTGGGAAAGTTATAGCTTTGGGACCGGAACTTTTTGGTTATAGCATAGTGCATAAGCTTGAGGTCAATCTAAAGTATTTTCTGTCACTCGGCATACATACCCGGACTCTAGGAGAAATGATTGCTGATTTTCCTATGCTGCTACGATATAATATCGACATTCTTCGACCAAAGTATCAATATTTGCGGAGAACCATGGTTCGCCCTCTGCAAGATATTATAGACTTTCCAAGGTAAGAATCAGCATATGCATATACTAACTTCTCGTAAGCTGAGTTTGAAAATAATTCAGCTAGAAAACTGAAAGCAACGGATCGAAAAGGTTGTTTGGTTCAATCGTGTTCATTTGATGTACCATGAAGCTCATAATTTTGTTGAGCCAAAAGTTCTTATGATATTATATACAGGTTTTTCAGCTATTCTCTGGAGGGGCGCATCATTCCTAGGCATCAAGTTCTGGTTGAGAATCATATAAATCTCAATCTGCGTTCCATGTTAGCTTGCACAGATGAAGAGTTTAAGAACAAGGTTGCAGATATAGTGGAAAAACGCCAAAGATTTGAATCCGGTAATGTGGATGGTTCTCTCTCCGTTGTCCATACGACTCGCAACTCTATCGACTCGACTACACTAGATGACTCGTTGGGTGAAACTAGAGAAGATTGATTTGATGGTCTTGAACTTTCAACTTCCCTCCCCACTTAAAAGAATATGGCACAGACGAAGAGCTCAAACTTGTTCTTATTGCACCATTATCGGGATGGATCGGGTCATGTTTCTATGATAATTCATAGCTATCCAAAGACATTAGAGAACAAAAGACTTTCATCCCAACAGAGAGAAGGTAAGGAATGCTAAACACCTATCAACTTCTTCCACCATGCTGTATACATATTGTATCAAATGATTTTCTATCTGTGTGAATAGTTAAAGGTTTGAACTAAATTTGATGATTTACGAGTCCTGATCCATCTGTAGCAGAGCGATTGCAAGCAAAAAATCGCTATAAAAGAACTACGAGGACAAAGACAAGGGTGGACACAACTATGGCTGCAAGATATCACAAATGTACATGTCATAAAGTTCCCTGTTTTTCAGATGGTGCCACATTTCTTCTGTTTTTCAGCTCTTCATATGGATGGCTGAGGGCAACAACTTTCAATGAAAACAGTAATAGGTTCTATAAATGTTCAAAAAGAAAGCAAAAATGGTGTATTGTACTAGGAACAGACGCATGCAAATTCCTTATAATTTAATGCCTCAAAGTGTTACTCTATCTTAATTCTAACAATATCCATCTTCATTTATCTTAAATTC

mRNA sequence

AGCAGAACAAAGCCATAATGTTATCTTCTTCATCTCTATACTCCAACCCACATCCCCACCTCCGTCTTCTTCATTTCCGCCCTCCCAATCCTCTCTCCAATGTCGTCCTCCACCTCCCCTCCAACCAGAAACCCAACGCCACCGTCGCCTCCGCTGATCTCCGCCGCAACAATCCGACGGAAAAACCATCCACCAACGTCTCCGATCCTATCCAGCCGGAACCCCGCAAACACAACTCCAAATCCGCCGCCCTTGTTAACCAGTACCTATCATCCGGCGAATCCCCAAATCCACAAAACCTAGAACCCCCTTTGCCCGAAGAAGAGAAAGTGAAGCTTCTCGAACTCTCGCTTGTGAGAAAACGAACCCCTCAATTTCCTGGATCGATTTATGTTCAATCCCCGAGTGATTCCGATGTGGGTTCTTCTCTTCCTCCCCTGCAATCTCTGTTTCGAAATGCAGGAAGTGAGTTCGATGGCGAAGATGACCGGAAGATAATAAGGAGAGCTCTAGAGATTCGCCGGAAGGTAACCTCCGAGATCTTCAAGGAGGCGATGCGGAAAGGGAAATTTGGAATCACTTACACCGATAATCTCCTTGGTTGGTTGTCTGATTTCATCGATTTTGTAATGATTCAAGCCGCGTCGATGAAGCAGTTGCCTGAATTTGCTCATTTGTCGTTCAATCTTCGTGCAAAGACCGTCATTGAAGAATCAAATGTGGTACCTCTTATCAGGTGGTTGAAGCATAACTCATTGTCATATCCACAGATAGGTAAGCTCATATGCATGTCGAAGGGAAAGCTTGAATCCATTAGACGTCTTGTGGAATGGCTGAAGGGGATTCATGTAAAGGGAGGATATCTTGGACTTACACTCACTAAAGCTGGAGGGAATATATTGGAGCGCAGCAATGATGAACTAGATGAAATTGTGAGCTACTTAGAGAGTAATGGAGTTAGAATGGTTTGGATTGGCTTTGTTATGAGTCGATGTCCTTATTTGCTGTCTTACAGTTTGGAAGAACTGAAAAGTCGTGTGGAGTTCTTCTTGAATATGGGTATGAATGAGAAAGACTTTGGTACAATGGTCTTTGATTTCCCTAAGGTGCTTGGTCAGTATAGTCTTGAAGATATGAACCAAAAGGTCAACTATTTAAAGGAGTTTGGGCTTGAGATTGAGGATATAGGCAGATTACTGGCATACAAACCACAGTTGATGAATGGTAGCATTGAGGGTAAATGGAAGCCTCTTGTTAAGTACTTCTACTATCTTGGAATTTCCAAAGAGGGTTTGAGGAGGATGCTTACAATAAAGCCAGTGGTTTTCTGCCTTGATCTGGAGACCATCATTGTGCCAAAGGTGCAATTCTTCAGAGACATAGGAGTTCGAGATGACGGGATTAGTAACATGCTTGTGAAGTTTCCATCATTATTGACATTCAGCCTGTACAAGAAAATCCGTCCTGTTGTCATATTCTTGATGACTAAAGCAGGAGTCAGGGAGAAAGACATTGGGAAAGTTATAGCTTTGGGACCGGAACTTTTTGGTTATAGCATAGTGCATAAGCTTGAGGTCAATCTAAAGTATTTTCTGTCACTCGGCATACATACCCGGACTCTAGGAGAAATGATTGCTGATTTTCCTATGCTGCTACGATATAATATCGACATTCTTCGACCAAAGTATCAATATTTGCGGAGAACCATGGTTCGCCCTCTGCAAGATATTATAGACTTTCCAAGGTTTTTCAGCTATTCTCTGGAGGGGCGCATCATTCCTAGGCATCAAGTTCTGGTTGAGAATCATATAAATCTCAATCTGCGTTCCATGTTAGCTTGCACAGATGAAGAGTTTAAGAACAAGGTTGCAGATATAGTGGAAAAACGCCAAAGATTTGAATCCGGTAATGTGGATGGTTCTCTCTCCGTTGTCCATACGACTCGCAACTCTATCGACTCGACTACACTAGATGACTCGTTGGGTGAAACTAGAGAAGATTGATTTGATGGTCTTGAACTTTCAACTTCCCTCCCCACTTAAAAGAATATGGCACAGACGAAGAGCTCAAACTTGTTCTTATTGCACCATTATCGGGATGGATCGGGTCATGTTTCTATGATAATTCATAGCTATCCAAAGACATTAGAGAACAAAAGACTTTCATCCCAACAGAGAGAAGGTAAGGAATGCTAAACACCTATCAACTTCTTCCACCATGCTGTATACATATTGTATCAAATGATTTTCTATCTGTGTGAATAGTTAAAGGTTTGAACTAAATTTGATGATTTACGAGTCCTGATCCATCTGTAGCAGAGCGATTGCAAGCAAAAAATCGCTATAAAAGAACTACGAGGACAAAGACAAGGGTGGACACAACTATGGCTGCAAGATATCACAAATGTACATGTCATAAAGTTCCCTGTTTTTCAGATGGTGCCACATTTCTTCTGTTTTTCAGCTCTTCATATGGATGGCTGAGGGCAACAACTTTCAATGAAAACAGTAATAGGTTCTATAAATGTTCAAAAAGAAAGCAAAAATGGTGTATTGTACTAGGAACAGACGCATGCAAATTCCTTATAATTTAATGCCTCAAAGTGTTACTCTATCTTAATTCTAACAATATCCATCTTCATTTATCTTAAATTC

Coding sequence (CDS)

ATGTTATCTTCTTCATCTCTATACTCCAACCCACATCCCCACCTCCGTCTTCTTCATTTCCGCCCTCCCAATCCTCTCTCCAATGTCGTCCTCCACCTCCCCTCCAACCAGAAACCCAACGCCACCGTCGCCTCCGCTGATCTCCGCCGCAACAATCCGACGGAAAAACCATCCACCAACGTCTCCGATCCTATCCAGCCGGAACCCCGCAAACACAACTCCAAATCCGCCGCCCTTGTTAACCAGTACCTATCATCCGGCGAATCCCCAAATCCACAAAACCTAGAACCCCCTTTGCCCGAAGAAGAGAAAGTGAAGCTTCTCGAACTCTCGCTTGTGAGAAAACGAACCCCTCAATTTCCTGGATCGATTTATGTTCAATCCCCGAGTGATTCCGATGTGGGTTCTTCTCTTCCTCCCCTGCAATCTCTGTTTCGAAATGCAGGAAGTGAGTTCGATGGCGAAGATGACCGGAAGATAATAAGGAGAGCTCTAGAGATTCGCCGGAAGGTAACCTCCGAGATCTTCAAGGAGGCGATGCGGAAAGGGAAATTTGGAATCACTTACACCGATAATCTCCTTGGTTGGTTGTCTGATTTCATCGATTTTGTAATGATTCAAGCCGCGTCGATGAAGCAGTTGCCTGAATTTGCTCATTTGTCGTTCAATCTTCGTGCAAAGACCGTCATTGAAGAATCAAATGTGGTACCTCTTATCAGGTGGTTGAAGCATAACTCATTGTCATATCCACAGATAGGTAAGCTCATATGCATGTCGAAGGGAAAGCTTGAATCCATTAGACGTCTTGTGGAATGGCTGAAGGGGATTCATGTAAAGGGAGGATATCTTGGACTTACACTCACTAAAGCTGGAGGGAATATATTGGAGCGCAGCAATGATGAACTAGATGAAATTGTGAGCTACTTAGAGAGTAATGGAGTTAGAATGGTTTGGATTGGCTTTGTTATGAGTCGATGTCCTTATTTGCTGTCTTACAGTTTGGAAGAACTGAAAAGTCGTGTGGAGTTCTTCTTGAATATGGGTATGAATGAGAAAGACTTTGGTACAATGGTCTTTGATTTCCCTAAGGTGCTTGGTCAGTATAGTCTTGAAGATATGAACCAAAAGGTCAACTATTTAAAGGAGTTTGGGCTTGAGATTGAGGATATAGGCAGATTACTGGCATACAAACCACAGTTGATGAATGGTAGCATTGAGGGTAAATGGAAGCCTCTTGTTAAGTACTTCTACTATCTTGGAATTTCCAAAGAGGGTTTGAGGAGGATGCTTACAATAAAGCCAGTGGTTTTCTGCCTTGATCTGGAGACCATCATTGTGCCAAAGGTGCAATTCTTCAGAGACATAGGAGTTCGAGATGACGGGATTAGTAACATGCTTGTGAAGTTTCCATCATTATTGACATTCAGCCTGTACAAGAAAATCCGTCCTGTTGTCATATTCTTGATGACTAAAGCAGGAGTCAGGGAGAAAGACATTGGGAAAGTTATAGCTTTGGGACCGGAACTTTTTGGTTATAGCATAGTGCATAAGCTTGAGGTCAATCTAAAGTATTTTCTGTCACTCGGCATACATACCCGGACTCTAGGAGAAATGATTGCTGATTTTCCTATGCTGCTACGATATAATATCGACATTCTTCGACCAAAGTATCAATATTTGCGGAGAACCATGGTTCGCCCTCTGCAAGATATTATAGACTTTCCAAGGTTTTTCAGCTATTCTCTGGAGGGGCGCATCATTCCTAGGCATCAAGTTCTGGTTGAGAATCATATAAATCTCAATCTGCGTTCCATGTTAGCTTGCACAGATGAAGAGTTTAAGAACAAGGTTGCAGATATAGTGGAAAAACGCCAAAGATTTGAATCCGGTAATGTGGATGGTTCTCTCTCCGTTGTCCATACGACTCGCAACTCTATCGACTCGACTACACTAGATGACTCGTTGGGTGAAACTAGAGAAGATTGA

Protein sequence

MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTNVSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAMRKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIRWLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNDELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFDFPKVLGQYSLEDMNQKVNYLKEFGLEIEDIGRLLAYKPQLMNGSIEGKWKPLVKYFYYLGISKEGLRRMLTIKPVVFCLDLETIIVPKVQFFRDIGVRDDGISNMLVKFPSLLTFSLYKKIRPVVIFLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRED

Homology

[Close]

BLAST of Carg19410 vs. NCBI nr
Match: XP_022952271.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1009.6 bits (2609), Expect = 4.9e-291
Identity = 659/661 (99.70%), Postives = 659/661 (99.70%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNPHPHLRLLHFR PNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN
Sbjct: 1   MLSSSSLYSNPHPHLRLLHFRTPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
           VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF
Sbjct: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
           RKGKFGITYTDNLLGWL DFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR
Sbjct: 181 RKGKFGITYTDNLLGWLPDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND
Sbjct: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD
Sbjct: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA
Sbjct: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE
Sbjct: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660

Query: 661 D 662
           D
Sbjct: 661 D 661

[Close]

BLAST of Carg19410 vs. NCBI nr
Match: XP_023553690.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 996.9 bits (2576), Expect = 3.3e-287
Identity = 653/661 (98.79%), Postives = 655/661 (99.09%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNPHPHLR LHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN
Sbjct: 50  MLSSSSLYSNPHPHLRPLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 109

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
           VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF
Sbjct: 110 VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 169

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM
Sbjct: 170 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 229

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
           RKGKFGITYTDNLLGWL DFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR
Sbjct: 230 RKGKFGITYTDNLLGWLPDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 289

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND
Sbjct: 290 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 349

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD
Sbjct: 350 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 409

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 410 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 469

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 470 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 529

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA
Sbjct: 530 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 589

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVEN INL
Sbjct: 590 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENCINL 649

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSL++VHTT NSIDSTTLDDS GET E
Sbjct: 650 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLTIVHTTHNSIDSTTLDDSSGETIE 709

Query: 661 D 662
           D
Sbjct: 710 D 710

[Close]

BLAST of Carg19410 vs. NCBI nr
Match: XP_022972523.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 981.5 bits (2536), Expect = 1.4e-282
Identity = 648/661 (98.03%), Postives = 651/661 (98.49%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNPHPHLR LHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNP EKPSTN
Sbjct: 1   MLSSSSLYSNPHPHLRPLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPKEKPSTN 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
           VSDPIQ EPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF
Sbjct: 61  VSDPIQLEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEF GEDDRKIIRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFHGEDDRKIIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
           RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR
Sbjct: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND
Sbjct: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELK+RVEFFLNMGMN KDFGTMVFD
Sbjct: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKARVEFFLNMGMNGKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKDIGKV+ALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA
Sbjct: 481 XXXXXXXLMTKAGVREKDIGKVVALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVEN IN+
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENRINI 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLS VHTT NSIDSTTLDDS GET E
Sbjct: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLS-VHTTHNSIDSTTLDDSSGETIE 660

Query: 661 D 662
           D
Sbjct: 661 D 660

[Close]

BLAST of Carg19410 vs. NCBI nr
Match: XP_004150420.1 (PREDICTED: uncharacterized protein LOC101220316 [Cucumis sativus] >KGN44356.1 hypothetical protein Csa_7G268530 [Cucumis sativus])

HSP 1 Score: 872.1 bits (2252), Expect = 1.2e-249
Identity = 589/660 (89.24%), Postives = 622/660 (94.24%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNP P    LH   PNPLSN V H  S +KP ATVASA+LR +NPTEKPST+
Sbjct: 1   MLSSSSLYSNPCPQFPPLHCCLPNPLSN-VFHFTSTRKPIATVASAELRPHNPTEKPSTD 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
            SD I+PEPRKHNSKSA+L+N YLSSGESPNPQN EPPLPE+E+VKLLELSLVRKRTPQF
Sbjct: 61  FSDHIRPEPRKHNSKSASLLNHYLSSGESPNPQNPEPPLPEDERVKLLELSLVRKRTPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSD DVGSSLPPLQSLFRN G EF  EDDRK+IRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDFDVGSSLPPLQSLFRNRGDEFCAEDDRKMIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
            KGKFGITYT+NLL WLS+FIDFVMIQAASMKQ PEFAHLSFN+RAKTVIE+SNVVPLIR
Sbjct: 181 GKGKFGITYTNNLLEWLSEFIDFVMIQAASMKQSPEFAHLSFNVRAKTVIEDSNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMS+GKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSN+
Sbjct: 241 WLKHNSLSYPQIGKLICMSRGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNE 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIV YLESNGVRMVW+GFV+SRCPYLLSY++EELK+RVEFFLNMGMN+KDFGTMVFD
Sbjct: 301 ELDEIVDYLESNGVRMVWMGFVISRCPYLLSYNMEELKTRVEFFLNMGMNDKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKD+GKVIALGPELFGYSIVHKLEVNLKY+LSLGI+TR LGEMI 
Sbjct: 481 XXXXXXXLMTKAGVREKDVGKVIALGPELFGYSIVHKLEVNLKYYLSLGIYTRNLGEMIT 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQD+IDFPRFFSYSLEGRIIPRHQVLVEN IN+
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRINI 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVEKRQRFESGN+DGSLS+ H T +SI+S+ LDD L E +E
Sbjct: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNIDGSLSIPHATNDSINSSGLDDFLSENKE 659

[Close]

BLAST of Carg19410 vs. NCBI nr
Match: XP_008447029.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo])

HSP 1 Score: 864.4 bits (2232), Expect = 2.5e-247
Identity = 587/660 (88.94%), Postives = 617/660 (93.48%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNP+P    LHF  PNPLSNV L   S + P  TVA A+LR +NPTEKPST 
Sbjct: 1   MLSSSSLYSNPYPQFPPLHFCLPNPLSNVFL-FTSTRIPIPTVAFAELRPHNPTEKPSTA 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
           VSD I PE RKHNSKSA+L+N YLSSGESPNPQN EPPLPE+E+VKLLELSLVRKR PQF
Sbjct: 61  VSDHIHPEARKHNSKSASLLNHYLSSGESPNPQNPEPPLPEDERVKLLELSLVRKRAPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSD  VGSSLPPLQSLFRN G EF  EDDRK+IRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDFGVGSSLPPLQSLFRNGGDEFCAEDDRKMIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
           RKGKFGITYT+NLLGWLS+F+DFVMIQAASMKQ PEF+HLSFN+RAKTVIE+SNVVPLIR
Sbjct: 181 RKGKFGITYTNNLLGWLSEFVDFVMIQAASMKQSPEFSHLSFNVRAKTVIEDSNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAG NILERSN+
Sbjct: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGVNILERSNE 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIV YLESNGVRMVW+GFVMSRCPYLLSYS+EELK+RVEFFLNMGMN+KDFGTMVFD
Sbjct: 301 ELDEIVDYLESNGVRMVWMGFVMSRCPYLLSYSMEELKTRVEFFLNMGMNDKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKD+GKVIALGPELFGYSIVHKLEVNLKYFLSLGI+TR LGEMI 
Sbjct: 481 XXXXXXXLMTKAGVREKDVGKVIALGPELFGYSIVHKLEVNLKYFLSLGIYTRNLGEMIT 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQD+IDFPRFFSYSLEGRIIPRHQVLVEN IN+
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRINI 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVE+RQRFESGN+DGSLS+ HTT  SI+S+ LDD   E +E
Sbjct: 601 NLRSMLACTDEEFKNKVADIVERRQRFESGNIDGSLSIPHTTNYSINSSGLDDFSSENKE 659

[Close]

BLAST of Carg19410 vs. TAIR10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 501.1 bits (1289), Expect = 1.0e-141
Identity = 401/601 (66.72%), Postives = 485/601 (80.70%), Query Frame = 0


Query: 43  VASADLRRNNPTEKPSTNVSDPIQPEPRKHNSKSAALV---NQYLSSGESPNPQN----- 102
           ++S+  R++N  +   T +        R+HN++S +L    N+ L   ++PN        
Sbjct: 17  ISSSLRRQDNADDSQDTVIR-------RRHNARSISLYIRHNRDLKLNKNPNESQXXXXX 76

Query: 103 ----LEPPLPEEEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPLQSLFRNAGS 162
                   L  E + KLLELSLV +RTPQFPGSIY QS SD+D+ SSLP L++   + G 
Sbjct: 77  XXXXXXXDLDGENRSKLLELSLVTRRTPQFPGSIYAQSASDADIASSLPSLRNFLGSDGD 136

Query: 163 EFDGEDDRKIIRRALEIRRKVTSEIFKEAM-RKGKFGITYTDNLLGWLSDFIDFVMIQAA 222
           + DGE +R++I +ALEIRRKVT EI KE++ RKG+FGITY  N+   L DF+D VMIQAA
Sbjct: 137 D-DGESEREMIVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGDFVDHVMIQAA 196

Query: 223 SMKQLPEFAHLSFNLRAKTVIEESNVVPLIRWLKHNSLSYPQIGKLICMSKGKLESIRRL 282
           ++K+LPEF+   FNLRA+TVIE+SN VPL+RWLKH+ LSY +I K+ICMSKG L+SIR +
Sbjct: 197 ALKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHHELSYNRIAKIICMSKGNLDSIRIM 256

Query: 283 VEWLKGIHVKGGYLGLTLTKAGGNILERSNDELDEIVSYLESNGVRMVWIGFVMSRCPYL 342
           +EWLK IHVKG ++ +   ++G NIL+R+ +EL+EIV YLESNGVR  W+G+V+ RCP L
Sbjct: 257 IEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVVGRCPEL 316

Query: 343 LSYSLEELKSRVEFFLNMGMNEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXXXXXXXXX 402
           LS+S+EE+KSRV+FFL MGMN+ DFGTMV+D+PK+XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 317 LSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIXXXXXXXXXXXXXXXXXXXXXXXXX 376

Query: 403 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 462
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 377 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 436

Query: 463 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGVREKDIGKVIALGPEL 522
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T+AGV +KDIGKVIA+ P L
Sbjct: 437 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAGVTQKDIGKVIAMDPAL 496

Query: 523 FGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQ 582
            G SI  KLE N++Y++SLGI    LGEMIADFPMLLRYN+D LRPKY+YLRRTM+RPLQ
Sbjct: 497 LGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQ 556

Query: 583 DIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKVADIVEKRQRFES 631
           D+I+FPRFFSYSLE RIIPRH ++VEN +N  LR MLACTDEEF+ +V D VE+R+RFE+
Sbjct: 557 DLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRERFEA 609

[Close]

BLAST of Carg19410 vs. TAIR10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-16
Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 497 KDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPK 556
           +D+G +I   P+    S    L+ ++ +    G       EM+   P +L  N+ I++  
Sbjct: 375 EDLGSLIERMPQFVSLSESPMLK-HIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLS 434

Query: 557 YQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNK 616
           ++Y ++ M RPLQD++DFP FF+Y LE  + PRH+ +++  I  +L  ML C+DE+F+  
Sbjct: 435 FEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFE-- 494

Query: 617 VADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTL 652
                   QR     +D  +  V T  +S D  TL
Sbjct: 495 --------QRMSYDTID--IEEVETDPSSFDMNTL 516

[Close]

BLAST of Carg19410 vs. TAIR10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 67.0 bits (162), Expect = 4.9e-11
Identity = 26/96 (27.08%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 522 LKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYS 581
           +++ L        + +M+   P +L   +++++  Y + +  M RP+++++++P +F+YS
Sbjct: 364 IEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYS 423

Query: 582 LEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKV 618
           LE RI PR+Q L    I  +L   L C+D+ F+ ++
Sbjct: 424 LESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERL 459

[Close]

BLAST of Carg19410 vs. TAIR10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-10
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 515 VHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNI-DILRPKYQYLRRTMVRPLQDIID 574
           V KL   +++  S+G        +    P +  Y++ D LRPK+++L   M R L+++  
Sbjct: 169 VEKLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKK 228

Query: 575 FPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNK 617
           FP++F++SL  RI PRH  L + ++ ++L  ML   D++F +K
Sbjct: 229 FPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271

[Close]

BLAST of Carg19410 vs. TAIR10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-08
Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 533 RTLGEMIADFPMLLRYNI-DILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQ 592
           R+   M   FP L  Y+I +   PK +YL   M R ++++++FP++FS+SLE RI PRH+
Sbjct: 226 RSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHE 285

Query: 593 VLVENHINLNLRSMLACTDEEFKN 616
                 +   L  ML   +  F++
Sbjct: 286 ACAAKGVRFPLPVMLKTNEAGFRD 309

[Close]

BLAST of Carg19410 vs. Swiss-Prot
Match: sp|F4IHL3|MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.8e-140
Identity = 401/601 (66.72%), Postives = 485/601 (80.70%), Query Frame = 0


Query: 43  VASADLRRNNPTEKPSTNVSDPIQPEPRKHNSKSAALV---NQYLSSGESPNPQN----- 102
           ++S+  R++N  +   T +        R+HN++S +L    N+ L   ++PN        
Sbjct: 17  ISSSLRRQDNADDSQDTVIR-------RRHNARSISLYIRHNRDLKLNKNPNESQXXXXX 76

Query: 103 ----LEPPLPEEEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPLQSLFRNAGS 162
                   L  E + KLLELSLV +RTPQFPGSIY QS SD+D+ SSLP L++   + G 
Sbjct: 77  XXXXXXXDLDGENRSKLLELSLVTRRTPQFPGSIYAQSASDADIASSLPSLRNFLGSDGD 136

Query: 163 EFDGEDDRKIIRRALEIRRKVTSEIFKEAM-RKGKFGITYTDNLLGWLSDFIDFVMIQAA 222
           + DGE +R++I +ALEIRRKVT EI KE++ RKG+FGITY  N+   L DF+D VMIQAA
Sbjct: 137 D-DGESEREMIVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGDFVDHVMIQAA 196

Query: 223 SMKQLPEFAHLSFNLRAKTVIEESNVVPLIRWLKHNSLSYPQIGKLICMSKGKLESIRRL 282
           ++K+LPEF+   FNLRA+TVIE+SN VPL+RWLKH+ LSY +I K+ICMSKG L+SIR +
Sbjct: 197 ALKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHHELSYNRIAKIICMSKGNLDSIRIM 256

Query: 283 VEWLKGIHVKGGYLGLTLTKAGGNILERSNDELDEIVSYLESNGVRMVWIGFVMSRCPYL 342
           +EWLK IHVKG ++ +   ++G NIL+R+ +EL+EIV YLESNGVR  W+G+V+ RCP L
Sbjct: 257 IEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVVGRCPEL 316

Query: 343 LSYSLEELKSRVEFFLNMGMNEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXXXXXXXXX 402
           LS+S+EE+KSRV+FFL MGMN+ DFGTMV+D+PK+XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 317 LSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIXXXXXXXXXXXXXXXXXXXXXXXXX 376

Query: 403 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 462
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 377 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 436

Query: 463 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGVREKDIGKVIALGPEL 522
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T+AGV +KDIGKVIA+ P L
Sbjct: 437 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAGVTQKDIGKVIAMDPAL 496

Query: 523 FGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQ 582
            G SI  KLE N++Y++SLGI    LGEMIADFPMLLRYN+D LRPKY+YLRRTM+RPLQ
Sbjct: 497 LGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQ 556

Query: 583 DIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKVADIVEKRQRFES 631
           D+I+FPRFFSYSLE RIIPRH ++VEN +N  LR MLACTDEEF+ +V D VE+R+RFE+
Sbjct: 557 DLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRERFEA 609

[Close]

BLAST of Carg19410 vs. Swiss-Prot
Match: sp|Q9ZT96|MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.0e-15
Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 497 KDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPK 556
           +D+G +I   P+    S    L+ ++ +    G       EM+   P +L  N+ I++  
Sbjct: 375 EDLGSLIERMPQFVSLSESPMLK-HIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLS 434

Query: 557 YQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNK 616
           ++Y ++ M RPLQD++DFP FF+Y LE  + PRH+ +++  I  +L  ML C+DE+F+  
Sbjct: 435 FEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFE-- 494

Query: 617 VADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTL 652
                   QR     +D  +  V T  +S D  TL
Sbjct: 495 --------QRMSYDTID--IEEVETDPSSFDMNTL 516

[Close]

BLAST of Carg19410 vs. Swiss-Prot
Match: sp|B6TGN4|MTEF4_MAIZE (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-13
Identity = 40/149 (26.85%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 494 VREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDIL 553
           V  +D G+V+   P+         L+ ++ +  + G     + +M+   P LL  NIDI+
Sbjct: 328 VSREDFGRVLERMPQAISLGRAAVLK-HVNFLTACGFMLSQVSKMVVACPQLLALNIDIM 387

Query: 554 RPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEF 613
           R  ++Y +  M R L+++++FP FF+Y +E  + PRH+++    +  +L  +L C+D +F
Sbjct: 388 RMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKF 447

Query: 614 KNKV---ADIVEKRQRFESGNVDGSLSVV 640
             ++      VE+ +R +S +++ S+  V
Sbjct: 448 DERMKYDTIGVEEMEREDSSDMNASVDEV 475

[Close]

BLAST of Carg19410 vs. Swiss-Prot
Match: sp|Q6AUK6|MTEF4_ORYSJ (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-12
Identity = 35/124 (28.23%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 494 VREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDIL 553
           V  +D G+VI   P+         L+ ++ +  S G     + +M+   P LL  N+DI+
Sbjct: 337 VSSEDFGRVIERMPQAISLGRTAVLK-HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIM 396

Query: 554 RPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEF 613
           +  ++Y +  M R L+++++FP FF+Y LE  + PRH+++ +     +L  +L C+D +F
Sbjct: 397 KMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKF 456

Query: 614 KNKV 618
             ++
Sbjct: 457 DERM 459

[Close]

BLAST of Carg19410 vs. Swiss-Prot
Match: sp|Q9FK23|MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-05
Identity = 31/99 (31.31%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 525 FLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEG 584
           +LS G+    +  M    P +L+YN   L  K +YL   M R +++++ FP F  Y L+ 
Sbjct: 399 YLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDS 458

Query: 585 RIIPRHQVLVENH-INLNLRSMLACTDEEFKNKVADIVE 623
           RI  R++  +++   N++L  +L  + E F +K AD +E
Sbjct: 459 RIKHRYEEKLKSRGENMSLNKLLTVSAERF-SKAADNIE 496

[Close]

BLAST of Carg19410 vs. TrEMBL
Match: tr|A0A0A0K972|A0A0A0K972_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268530 PE=4 SV=1)

HSP 1 Score: 872.1 bits (2252), Expect = 8.1e-250
Identity = 589/660 (89.24%), Postives = 622/660 (94.24%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNP P    LH   PNPLSN V H  S +KP ATVASA+LR +NPTEKPST+
Sbjct: 1   MLSSSSLYSNPCPQFPPLHCCLPNPLSN-VFHFTSTRKPIATVASAELRPHNPTEKPSTD 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
            SD I+PEPRKHNSKSA+L+N YLSSGESPNPQN EPPLPE+E+VKLLELSLVRKRTPQF
Sbjct: 61  FSDHIRPEPRKHNSKSASLLNHYLSSGESPNPQNPEPPLPEDERVKLLELSLVRKRTPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSD DVGSSLPPLQSLFRN G EF  EDDRK+IRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDFDVGSSLPPLQSLFRNRGDEFCAEDDRKMIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
            KGKFGITYT+NLL WLS+FIDFVMIQAASMKQ PEFAHLSFN+RAKTVIE+SNVVPLIR
Sbjct: 181 GKGKFGITYTNNLLEWLSEFIDFVMIQAASMKQSPEFAHLSFNVRAKTVIEDSNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMS+GKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSN+
Sbjct: 241 WLKHNSLSYPQIGKLICMSRGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNE 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIV YLESNGVRMVW+GFV+SRCPYLLSY++EELK+RVEFFLNMGMN+KDFGTMVFD
Sbjct: 301 ELDEIVDYLESNGVRMVWMGFVISRCPYLLSYNMEELKTRVEFFLNMGMNDKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKD+GKVIALGPELFGYSIVHKLEVNLKY+LSLGI+TR LGEMI 
Sbjct: 481 XXXXXXXLMTKAGVREKDVGKVIALGPELFGYSIVHKLEVNLKYYLSLGIYTRNLGEMIT 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQD+IDFPRFFSYSLEGRIIPRHQVLVEN IN+
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRINI 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVEKRQRFESGN+DGSLS+ H T +SI+S+ LDD L E +E
Sbjct: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNIDGSLSIPHATNDSINSSGLDDFLSENKE 659

[Close]

BLAST of Carg19410 vs. TrEMBL
Match: tr|A0A1S3BHB5|A0A1S3BHB5_CUCME (transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489580 PE=4 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 1.7e-247
Identity = 587/660 (88.94%), Postives = 617/660 (93.48%), Query Frame = 0


Query: 1   MLSSSSLYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTN 60
           MLSSSSLYSNP+P    LHF  PNPLSNV L   S + P  TVA A+LR +NPTEKPST 
Sbjct: 1   MLSSSSLYSNPYPQFPPLHFCLPNPLSNVFL-FTSTRIPIPTVAFAELRPHNPTEKPSTA 60

Query: 61  VSDPIQPEPRKHNSKSAALVNQYLSSGESPNPQNLEPPLPEEEKVKLLELSLVRKRTPQF 120
           VSD I PE RKHNSKSA+L+N YLSSGESPNPQN EPPLPE+E+VKLLELSLVRKR PQF
Sbjct: 61  VSDHIHPEARKHNSKSASLLNHYLSSGESPNPQNPEPPLPEDERVKLLELSLVRKRAPQF 120

Query: 121 PGSIYVQSPSDSDVGSSLPPLQSLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAM 180
           PGSIYVQSPSD  VGSSLPPLQSLFRN G EF  EDDRK+IRRALEIRRKVTSEIFKEAM
Sbjct: 121 PGSIYVQSPSDFGVGSSLPPLQSLFRNGGDEFCAEDDRKMIRRALEIRRKVTSEIFKEAM 180

Query: 181 RKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIR 240
           RKGKFGITYT+NLLGWLS+F+DFVMIQAASMKQ PEF+HLSFN+RAKTVIE+SNVVPLIR
Sbjct: 181 RKGKFGITYTNNLLGWLSEFVDFVMIQAASMKQSPEFSHLSFNVRAKTVIEDSNVVPLIR 240

Query: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSND 300
           WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAG NILERSN+
Sbjct: 241 WLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGVNILERSNE 300

Query: 301 ELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFD 360
           ELDEIV YLESNGVRMVW+GFVMSRCPYLLSYS+EELK+RVEFFLNMGMN+KDFGTMVFD
Sbjct: 301 ELDEIVDYLESNGVRMVWMGFVMSRCPYLLSYSMEELKTRVEFFLNMGMNDKDFGTMVFD 360

Query: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIA 540
           XXXXXXXLMTKAGVREKD+GKVIALGPELFGYSIVHKLEVNLKYFLSLGI+TR LGEMI 
Sbjct: 481 XXXXXXXLMTKAGVREKDVGKVIALGPELFGYSIVHKLEVNLKYFLSLGIYTRNLGEMIT 540

Query: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINL 600
           DFPMLLRYNIDILRPKYQYLRRTMVRPLQD+IDFPRFFSYSLEGRIIPRHQVLVEN IN+
Sbjct: 541 DFPMLLRYNIDILRPKYQYLRRTMVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRINI 600

Query: 601 NLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTTRNSIDSTTLDDSLGETRE 660
           NLRSMLACTDEEFKNKVADIVE+RQRFESGN+DGSLS+ HTT  SI+S+ LDD   E +E
Sbjct: 601 NLRSMLACTDEEFKNKVADIVERRQRFESGNIDGSLSIPHTTNYSINSSGLDDFSSENKE 659

[Close]

BLAST of Carg19410 vs. TrEMBL
Match: tr|A0A2I4GVA6|A0A2I4GVA6_9ROSI (transcription termination factor MTERF2, chloroplastic OS=Juglans regia OX=51240 GN=LOC109011184 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.2e-157
Identity = 453/646 (70.12%), Postives = 514/646 (79.57%), Query Frame = 0


Query: 7   LYSNPHPHLRLLHFRPPNPLSNVVLHLPSNQKPNATVASADLRRNNPTEKPSTNVSDPIQ 66
           LY  PHPH   L   PP               PN+T+ S+ L  N+P +          +
Sbjct: 2   LYCPPHPHCPSL---PP--------------YPNSTIISSSL--NHPNQD---------R 61

Query: 67  PEPRKHNSKSAALVNQYLS---------SGESPNPQNLEPPLPEEEKVKLLELSLVRKRT 126
              R+HNSKS  L+ ++LS                             +LL+LSL  KRT
Sbjct: 62  LLLRRHNSKSTVLLLRHLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLLQLSLATKRT 121

Query: 127 PQFPGSIYVQSPSDSDVGSSLPPLQSLFR-NAGSEFDGEDDRKIIRRALEIRRKVTSEIF 186
           PQFPGSIYVQSPSD DV +SLPPL++L +  AG E   EDD K+I RALEIRRKVT+EIF
Sbjct: 122 PQFPGSIYVQSPSDPDVHTSLPPLRTLLQGEAGGE--EEDDHKVIARALEIRRKVTAEIF 181

Query: 187 KEAMRKGKFGITYTDNLLGWLSDFIDFVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVV 246
           KEAMRKGKFG+TY  NL   L+ FID+VM++AA+MK+LPEF+  +FN RAKTVI++SNVV
Sbjct: 182 KEAMRKGKFGLTYITNLTNRLAAFIDYVMVEAAAMKRLPEFSGSTFNFRAKTVIQDSNVV 241

Query: 247 PLIRWLKHNSLSYPQIGKLICMSKGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILE 306
           PLIRWLKHNS+SYP+IGKLI MS+GK+ESIRR+VEWLK IHVKG +LG+TLTKAG N+LE
Sbjct: 242 PLIRWLKHNSVSYPKIGKLISMSRGKIESIRRVVEWLKSIHVKGEFLGVTLTKAGENLLE 301

Query: 307 RSNDELDEIVSYLESNGVRMVWIGFVMSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGT 366
            SNDELDEIV YLESNGVR VW+G+V+SRCP LLSYS+EEL+SRV+ FL+MGMN+ DFGT
Sbjct: 302 LSNDELDEIVDYLESNGVRRVWMGYVVSRCPQLLSYSMEELRSRVQLFLDMGMNDNDFGT 361

Query: 367 MVFDFPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 426
           MVFD+P+V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 362 MVFDYPRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421

Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 486
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 422 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 481

Query: 487 XXXXXXXXXXXLMTKAGVREKDIGKVIALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLG 546
           XXXXXXXXXXX MTKAGV E+DIGKVIAL PEL G SIV KLE N+KYFLSLGIHTR LG
Sbjct: 482 XXXXXXXXXXXXMTKAGVNERDIGKVIALAPELLGCSIVKKLEGNVKYFLSLGIHTRQLG 541

Query: 547 EMIADFPMLLRYNIDILRPKYQYLRRTMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVEN 606
           EMIADFPMLLRYN+D+LRPKY+YLRR MVRPLQD+I+FPRFFSYSL+GRIIPRH++LVE 
Sbjct: 542 EMIADFPMLLRYNVDVLRPKYRYLRRIMVRPLQDLIEFPRFFSYSLDGRIIPRHKILVEK 601

Query: 607 HINLNLRSMLACTDEEFKNKVADIVEKRQRFESGNVDGSLSVVHTT 643
            INL LR MLA TDEEF+ KV  IVE R+RFE+G +   LS    T
Sbjct: 602 QINLKLRYMLASTDEEFEKKVEAIVENRRRFEAGLIYDDLSASQAT 617

[Close]

BLAST of Carg19410 vs. TrEMBL
Match: tr|I1LQ35|I1LQ35_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100813633 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.8e-156
Identity = 443/622 (71.22%), Postives = 507/622 (81.51%), Query Frame = 0


Query: 31  LHLPSNQKPNATVASADL-RRNNPTEKPSTNVSDPIQPEPRKHNSKSAALVNQYLSSGE- 90
           L+LP +  P     S  +    NP E  S           RKHNSKS A +  +LS  + 
Sbjct: 10  LYLPCSSVPLRNSTSCTIFNCQNPNEHHSI---------LRKHNSKSTAYLLHHLSHKDG 69

Query: 91  SPNP------QNLEPPLPEEEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPLQ 150
           +PNP        L+ P+P EEKVK+LELSLVRKRTPQFPGSIY QSPSDSDVGSSLPPL+
Sbjct: 70  APNPIPXXXXSELQDPMPHEEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLR 129

Query: 151 SLFRNAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAMRKGKFGITYTDNLLGWLSDFID 210
           +LF++             I RAL+IRRKVT E+FKEAMRKGKFGITYT NL+G LS FID
Sbjct: 130 TLFQSXXXXXXXXXXXXXIMRALDIRRKVTEEVFKEAMRKGKFGITYTTNLVGRLSGFID 189

Query: 211 FVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIRWLKHNSLSYPQIGKLICMSKGK 270
           ++MI+AA++K+LPE+++ +FNLRAK VI++S VVPLIRWLKHN+LSYP+I KLI MS GK
Sbjct: 190 YIMIEAANLKRLPEYSNSTFNLRAKIVIDDSKVVPLIRWLKHNALSYPRIAKLILMSSGK 249

Query: 271 LESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNDELDEIVSYLESNGVRMVWIGFV 330
           LE++R  VEWLK +HVKG +LG+ +  AG NI +RS+ ELDEIV YLESNGVR  W+G+V
Sbjct: 250 LEAVRSFVEWLKSVHVKGEFLGVVMVNAGENIFQRSHVELDEIVLYLESNGVRRDWMGYV 309

Query: 331 MSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXX 390
           +SRCP LLSYSL+E+K+R +F+ +MG+NEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXX
Sbjct: 310 ISRCPQLLSYSLDEVKNRAQFYHDMGLNEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXX 369

Query: 391 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 450
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 370 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 429

Query: 451 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGVREKDIGKV 510
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGV EKDI KV
Sbjct: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGVSEKDIAKV 489

Query: 511 IALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRR 570
           +ALGPEL G +I HKL++N+KYFLSLGI  R LGEMIADFPMLLRYN D+LRPKY YLR+
Sbjct: 490 VALGPELLGCNIAHKLDLNVKYFLSLGIRLRQLGEMIADFPMLLRYNPDVLRPKYIYLRK 549

Query: 571 TMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKVADIVE 630
           TMVRPLQD+I+FPRFFSYSLEGRIIPRH+VLVEN IN+ LR ML  TDEEF   V  I+ 
Sbjct: 550 TMVRPLQDLIEFPRFFSYSLEGRIIPRHKVLVENQINIKLRYMLTSTDEEFNKMVKGIIR 609

Query: 631 KRQRFESG--NVDGSLSVVHTT 643
           KR RFES   N D +L ++ TT
Sbjct: 610 KRLRFESAVTNEDTTL-ILETT 621

[Close]

BLAST of Carg19410 vs. TrEMBL
Match: tr|A0A2P5EH47|A0A2P5EH47_9ROSA (Mitochodrial transcription termination factor OS=Trema orientalis OX=63057 GN=TorRG33x02_192740 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.0e-156
Identity = 395/633 (62.40%), Postives = 471/633 (74.41%), Query Frame = 0


Query: 38  KPNATVASADLRRNNPTEKPSTNVS---DPIQPE--PRKHNSKSAALVNQYLSSGES--- 97
           +P     SA   R    +  S+  S   DP  PE  PR HNSKS AL+ ++LS   S   
Sbjct: 31  RPRRNPNSASFNRRKTLQVQSSTDSSSGDPPIPEFNPRSHNSKSTALLLRHLSHHPSQFA 90

Query: 98  -PNPQNLE-PPLPEEEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPLQSLFR- 157
            P P++L+ P L  EE+V+LLELSLVR RTPQFPGS+YVQSP D+DV +SLPPL++LFR 
Sbjct: 91  GPKPEDLQHPQLSPEERVRLLELSLVRNRTPQFPGSLYVQSPGDADVATSLPPLRTLFRD 150

Query: 158 ----NAGSEFDGEDDRKIIRRALEIRRKVTSEIFKEAMRKGKFGITYTDNLLGWLSDFID 217
               +A    + +DD ++I RA+EIRRKVT+EIF EA+R+GKFGITY+ NL+G L  FID
Sbjct: 151 VDDGDADGAAEDDDDWEMITRAIEIRRKVTAEIFMEALRRGKFGITYSTNLVGKLGGFID 210

Query: 218 FVMIQAASMKQLPEFAHLSFNLRAKTVIEESNVVPLIRWLKHNSLSYPQIGKLICMSKGK 277
           +VM++AAS+K+LPEF++ +FN RAKTVI++SNVVPLIRWLKHNSLSYPQIGKLIC+SKG 
Sbjct: 211 YVMVEAASLKRLPEFSNSTFNARAKTVIQDSNVVPLIRWLKHNSLSYPQIGKLICISKGN 270

Query: 278 LESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNDELDEIVSYLESNGVRMVWIGFV 337
           LESI RL  WLK +HVKG ++GL + KAG  + ER+N ELDE   YLE NGVR  W+G+V
Sbjct: 271 LESITRLANWLKSMHVKGRFIGLAMLKAGEGVFERTNKELDETFEYLERNGVRREWMGYV 330

Query: 338 MSRCPYLLSYSLEELKSRVEFFLNMGMNEKDFGTMVFDFPKVXXXXXXXXXXXXXXXXXX 397
           +SRCP+LLSYS EE+K+RV FFL+MGMN+ DFGTMVFD+P+V        XXXXXXXXXX
Sbjct: 331 LSRCPHLLSYSFEEIKTRVGFFLDMGMNDNDFGTMVFDYPRV-----LGYXXXXXXXXXX 390

Query: 398 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 457
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 391 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 450

Query: 458 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTKAGVREKDIGKV 517
           XXXXX                                        LMTKAGV E+DIGKV
Sbjct: 451 XXXXXTTIVPKDIGVRDDAIGNMLVKFPPLLTYSLYKKIRPVVIFLMTKAGVTERDIGKV 510

Query: 518 IALGPELFGYSIVHKLEVNLKYFLSLGIHTRTLGEMIADFPMLLRYNIDILRPKYQYLRR 577
           IA GPEL G SIVHKLE+NLKY+LSLGI  R LGEMI DFPMLLRY+ID+LRPKY+YLRR
Sbjct: 511 IASGPELLGCSIVHKLEINLKYYLSLGIRLRQLGEMITDFPMLLRYSIDVLRPKYRYLRR 570

Query: 578 TMVRPLQDIIDFPRFFSYSLEGRIIPRHQVLVENHINLNLRSMLACTDEEFKNKVADIVE 637
           TMVR L+D+I+FPRFFSYSL+ RIIPRH++LVEN IN+ LR ML  TDEEF  ++  I E
Sbjct: 571 TMVRSLEDLIEFPRFFSYSLDSRIIPRHKILVENRINMKLRYMLGSTDEEFDKRIEAIRE 630

Query: 638 KRQRFESGNV-DGSLSVVHTTRNSIDSTTLDDS 655
           +RQRFESG V D S ++     +S  + T+ D+
Sbjct: 631 RRQRFESGVVNDKSCNLEIDDDDSTPNRTMVDT 658

The following BLAST results are available for this feature:

BLAST of Carg19410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952271.1	4.9e-291	99.70	transcription termination factor MTERF2, chloroplastic [Cucurbita moschata]	[more]
XP_023553690.1	3.3e-287	98.79	transcription termination factor MTERF2, chloroplastic [Cucurbita pepo subsp. pe...	[more]
XP_022972523.1	1.4e-282	98.03	transcription termination factor MTERF2, chloroplastic [Cucurbita maxima]	[more]
XP_004150420.1	1.2e-249	89.24	PREDICTED: uncharacterized protein LOC101220316 [Cucumis sativus] >KGN44356.1 hy...	[more]
XP_008447029.1	2.5e-247	88.94	PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo]	[more]

BLAST of Carg19410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21710.1	1.0e-141	66.72	Mitochondrial transcription termination factor family protein	[more]
AT4G02990.1	3.9e-16	30.97	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	4.9e-11	27.08	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	1.4e-10	32.04	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	3.0e-08	34.52	Mitochondrial transcription termination factor family protein	[more]

BLAST of Carg19410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4IHL3\|MTEF2_ARATH	1.8e-140	66.72	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
sp\|Q9ZT96\|MTEF4_ARATH	7.0e-15	30.97	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
sp\|B6TGN4\|MTEF4_MAIZE	2.3e-13	26.85	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
sp\|Q6AUK6\|MTEF4_ORYSJ	1.5e-12	28.23	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
sp\|Q9FK23\|MTEF8_ARATH	1.0e-05	31.31	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Carg19410 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K972\|A0A0A0K972_CUCSA	8.1e-250	89.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268530 PE=4 SV=1	[more]
tr\|A0A1S3BHB5\|A0A1S3BHB5_CUCME	1.7e-247	88.94	transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2I4GVA6\|A0A2I4GVA6_9ROSI	1.2e-157	70.12	transcription termination factor MTERF2, chloroplastic OS=Juglans regia OX=51240...	[more]
tr\|I1LQ35\|I1LQ35_SOYBN	1.8e-156	71.22	Uncharacterized protein OS=Glycine max OX=3847 GN=100813633 PE=4 SV=1	[more]
tr\|A0A2P5EH47\|A0A2P5EH47_9ROSA	3.0e-156	62.40	Mitochodrial transcription termination factor OS=Trema orientalis OX=63057 GN=To...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19410-RA	Carg19410-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 427..458 e-value: 0.013 score: 24.7 coord: 500..531 e-value: 0.17 score: 21.0 coord: 568..599 e-value: 0.025 score: 23.7 coord: 355..386 e-value: 5.0 score: 16.1 coord: 320..350 e-value: 1.4E-4 score: 31.2 coord: 463..495 e-value: 2.9E-4 score: 30.2 coord: 391..422 e-value: 0.074 score: 22.2 coord: 536..566 e-value: 0.05 score: 22.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 258..443 e-value: 4.1E-21 score: 75.2 coord: 306..614 e-value: 3.3E-66 score: 223.3
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 396..627 e-value: 2.4E-46 score: 160.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..76
None	No IPR available	PANTHER	PTHR13068:SF4	TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC	coord: 199..633
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 199..633

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19410	Cla015923	Watermelon (97103) v1	carwmB0305
Carg19410	Csa7G268530	Cucumber (Chinese Long) v2	carcuB0343
Carg19410	MELO3C012521	Melon (DHL92) v3.5.1	carmeB0321
Carg19410	ClCG02G005000	Watermelon (Charleston Gray)	carwcgB0308
Carg19410	CSPI07G11640	Wild cucumber (PI 183967)	carcpiB0349
Carg19410	Cucsa.240560	Cucumber (Gy14) v1	carcgyB0370
Carg19410	CmaCh19G006670	Cucurbita maxima (Rimu)	carcmaB0440
Carg19410	Lsi11G011040	Bottle gourd (USVL1VR-Ls)	carlsiB290
Carg19410	Cp4.1LG15g05500	Cucurbita pepo (Zucchini)	carcpeB0436
Carg19410	CsGy7G010890	Cucumber (Gy14) v2	carcgybB0327
Carg19410	MELO3C012521.2	Melon (DHL92) v3.6.1	carmedB0330
Carg19410	CsaV3_7G023590	Cucumber (Chinese Long) v3	carcucB0348
Carg19410	Cla97C02G031950	Watermelon (97103) v2	carwmbB0324
Carg19410	Bhi05G001096	Wax gourd	carwgoB0398

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19410	Silver-seed gourd	carcarB212
Carg19410	Silver-seed gourd	carcarB341
Carg19410	Cucumber (Gy14) v2	carcgybB0325
Carg19410	Cucumber (Gy14) v1	carcgyB0368
Carg19410	Cucurbita maxima (Rimu)	carcmaB0438
Carg19410	Cucurbita maxima (Rimu)	carcmaB0441
Carg19410	Cucurbita maxima (Rimu)	carcmaB0442
Carg19410	Cucurbita moschata (Rifu)	carcmoB0431
Carg19410	Cucurbita moschata (Rifu)	carcmoB0433
Carg19410	Cucurbita moschata (Rifu)	carcmoB0434
Carg19410	Cucurbita moschata (Rifu)	carcmoB0436
Carg19410	Cucurbita pepo (Zucchini)	carcpeB0437
Carg19410	Cucurbita pepo (Zucchini)	carcpeB0438
Carg19410	Cucurbita pepo (Zucchini)	carcpeB0440
Carg19410	Wild cucumber (PI 183967)	carcpiB0347
Carg19410	Cucumber (Chinese Long) v2	carcuB0341
Carg19410	Cucumber (Chinese Long) v3	carcucB0346
Carg19410	Bottle gourd (USVL1VR-Ls)	carlsiB288
Carg19410	Watermelon (Charleston Gray)	carwcgB0307
Carg19410	Watermelon (97103) v1	carwmB0307
Carg19410	Watermelon (97103) v2	carwmbB0323