Carg19382 (gene) Silver-seed gourd

NameCarg19382
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_096 : 280232 .. 282040 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTGATCTGTTCTTGTATCTATCTCTTAGGATGAATGAAAAATAGTGTTGGACGAAGATGCACAGAGGTTTCTTCGAAGAGCTTGGATTTATCTCTCTCGAGATTCTTCGATCGGAAACTTCCGTAGTACAAAGGACGGTGGAGGTAACGAGTTCGTCTCATTTTTTGCTCTGTTTTCTCTATGAAATTGTCAATATGATGTTTTGGATTGCATTATTCTAGGATCGGTCTTTCGAAAAAGAAAACTTCAATTGGCGGATGAGGCCAACTGTTGTTATGATGATCAAGTTTAATGGCGATGTTATGGATTAGATTTCTTGTTTGTTTTTTATACCGATAAAAAACAATAGTTCATGATAGAACCTTTAATGGTTAAAAGACAGTCTTAGTTTCAATTTTTATAAAACAAATAGTTTAATCTATGAAGTTTTAGTGGTTAAGGATTTAGTTTATTTACTTTTAAAATTAAAATAATTTATTGTATTATATTATGAAAATATTGTTAAGTTTTTTTAAAAAATTAGGTGATTGAAACACAAAGTATAAAGATTAAGCGATTTTGTAAATAAATAAAAAAAAAAAGAAAAAAGAAAAAAAGTTAGGCACAAGAAAGTAAGACTAAATTATTACTCATTAAACTTTTGAAATTACATGGTTATAAATTTGAAATTGGGAGATTAAATGACTTCCAACAAGAATGAAATATTGTTTCTGGTTGAAGACCAAAAATATTTTTTAAGGCATAATGCAATAAACAACCAAGTGAGAAATGGATAAAATAATAACATGGAATTAGGTAAGTCATATATTTCATCATACACATAAAAAAGATTTAAATAGCTTCATGAATGGACCTACTGTGGAATGGATTTCAACCTCAACTATTTAAAGATGATTTTGAAACAGTTTTTGGTGTTTTTGAAAGGAATTAGTCTCTAAATGATATGCAAGAATCACAAAATAAAGAAATAAAGATTTTTCATCATTTTTGTGATTGGTAATCTAGTCTAAAACTTTTTGCCAACTCTTTTGAATATATGCAGATATTTGTTTGTATGTCCACTAATTCTCACTTACATTTTGTTAATTTGAATCATCAATTAGGTAAAAATGGAACGAGGACTAAATATGCAAGGCTAGCTTCCAAGTGACTCAAGACAATCACAGTTAGTATTTGCCATCTTTCTTTACTACCTATCACTAACTGTTTCTGAAGACATATTCAAAGGTTTCAAATTCTATTGAATTTTATTGTTTTTTTTTTTGTTATTAAATTCTTAAAAGGTTTGTTGTAGCTTTTCAAAATGATTTAATTTTTCTTTTGAACATAATACTAAGTTGGAAATTTTGACATGGATTATATATATAATTTCACACACTTCTTATGTGAAGTGTAGCAGGTTTATCAAATAAATTAATGGTCAAATAAATTTTTTCTCTCTCAAGTTTGAGGCGTGCTATTTTTTCTGAGAGGCTTAAAAAACTCCTAAGTTGGGACTAGCTGATCCTTAATTGACGGAAAAATGGTATCTATGTGACAAAATATATTAATTTTAGATTTTCTTAGGGTGATTGTCCTGAGACAAGGCTAGACGAGGGAACATTTCTTCCTCTCTCTCTCTTTATCTCTCCATTTCTCTCATCTCCACCTCTCCGGCGAATCTCGCCACTGCCGCCGCCGCCCTTCATTCTTCCTCATAATCCCTTGGCGCTTCCTGCTTCCCTTCAGTGGTCGGCGCCGTCAAGACTGCCAGATATGGAGGGAAACTCTGTTGTTGCCATTATGGCTTCCAGATCTGGAACATAG

mRNA sequence

TTATTGATCTGTTCTTGTATCTATCTCTTAGGATGAATGAAAAATAGTGTTGGACGAAGATGCACAGAGGTTTCTTCGAAGAGCTTGGATTTATCTCTCTCGAGATTCTTCGATCGGAAACTTCCGTAGTACAAAGGACGGTGGAGGATCGGTCTTTCGAAAAAGAAAACTTCAATTGGCGGATGAGGCCAACTGTTGTTATGATGATCAAGTTTAATGGCGATGGTGATTGTCCTGAGACAAGGCTAGACGAGGGAACATTTCTTCCTCTCTCTCTCTTTATCTCTCCATTTCTCTCATCTCCACCTCTCCGGCGAATCTCGCCACTGCCGCCGCCGCCCTTCATTCTTCCTCATAATCCCTTGGCGCTTCCTGCTTCCCTTCAGTGGTCGGCGCCGTCAAGACTGCCAGATATGGAGGGAAACTCTGTTGTTGCCATTATGGCTTCCAGATCTGGAACATAG

Coding sequence (CDS)

ATGCACAGAGGTTTCTTCGAAGAGCTTGGATTTATCTCTCTCGAGATTCTTCGATCGGAAACTTCCGTAGTACAAAGGACGGTGGAGGATCGGTCTTTCGAAAAAGAAAACTTCAATTGGCGGATGAGGCCAACTGTTGTTATGATGATCAAGTTTAATGGCGATGGTGATTGTCCTGAGACAAGGCTAGACGAGGGAACATTTCTTCCTCTCTCTCTCTTTATCTCTCCATTTCTCTCATCTCCACCTCTCCGGCGAATCTCGCCACTGCCGCCGCCGCCCTTCATTCTTCCTCATAATCCCTTGGCGCTTCCTGCTTCCCTTCAGTGGTCGGCGCCGTCAAGACTGCCAGATATGGAGGGAAACTCTGTTGTTGCCATTATGGCTTCCAGATCTGGAACATAG

Protein sequence

MHRGFFEELGFISLEILRSETSVVQRTVEDRSFEKENFNWRMRPTVVMMIKFNGDGDCPETRLDEGTFLPLSLFISPFLSSPPLRRISPLPPPPFILPHNPLALPASLQWSAPSRLPDMEGNSVVAIMASRSGT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19382-RACarg19382-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19382CmaCh19G006960Cucurbita maxima (Rimu)carcmaB0440
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg19382Silver-seed gourdcarcarB342
Carg19382Cucumber (Gy14) v2carcgybB0325
Carg19382Cucumber (Gy14) v2carcgybB0326
Carg19382Cucumber (Gy14) v1carcgyB0368
Carg19382Cucumber (Gy14) v1carcgyB0372
Carg19382Cucurbita maxima (Rimu)carcmaB0438
Carg19382Cucurbita maxima (Rimu)carcmaB0441
Carg19382Cucurbita maxima (Rimu)carcmaB0442
Carg19382Cucurbita maxima (Rimu)carcmaB0443
Carg19382Cucurbita moschata (Rifu)carcmoB0431
Carg19382Cucurbita moschata (Rifu)carcmoB0433
Carg19382Cucurbita moschata (Rifu)carcmoB0434
Carg19382Cucurbita moschata (Rifu)carcmoB0436
Carg19382Cucurbita pepo (Zucchini)carcpeB0436
Carg19382Cucurbita pepo (Zucchini)carcpeB0437
Carg19382Cucurbita pepo (Zucchini)carcpeB0438
Carg19382Cucurbita pepo (Zucchini)carcpeB0440
Carg19382Wild cucumber (PI 183967)carcpiB0347
Carg19382Wild cucumber (PI 183967)carcpiB0348
Carg19382Cucumber (Chinese Long) v2carcuB0341
Carg19382Cucumber (Chinese Long) v2carcuB0342
Carg19382Cucumber (Chinese Long) v3carcucB0346
Carg19382Cucumber (Chinese Long) v3carcucB0347
Carg19382Bottle gourd (USVL1VR-Ls)carlsiB288
Carg19382Bottle gourd (USVL1VR-Ls)carlsiB290
Carg19382Melon (DHL92) v3.5.1carmeB0320
Carg19382Melon (DHL92) v3.5.1carmeB0321
Carg19382Melon (DHL92) v3.6.1carmedB0329
Carg19382Melon (DHL92) v3.6.1carmedB0330
Carg19382Watermelon (Charleston Gray)carwcgB0307
Carg19382Watermelon (Charleston Gray)carwcgB0308
Carg19382Watermelon (97103) v1carwmB0305
Carg19382Watermelon (97103) v1carwmB0307
Carg19382Watermelon (97103) v2carwmbB0323
Carg19382Watermelon (97103) v2carwmbB0324
Carg19382Wax gourdcarwgoB0397
Carg19382Wax gourdcarwgoB0401