Carg19366 (gene) Silver-seed gourd

Overview
NameCarg19366
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranslocon-associated protein subunit alpha-like
LocationCucurbita_argyrosperma_scaffold_096 : 135796 .. 140073 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGTTCTCTTCTCGATTCCCAAATAAAGGTCGCTCATAGATCCCCAAGTTTGACCCTCGAAAATCGAAGCTTGGTCGTCTCTCCCTTTCTCTCTCTAATCGGAGTTTCCTCGATCTACGCTCTTCCGTTCGATTCGCCATTGTCGCCATGAAAACCTTCAGAGTTTTCTTCCTCGCACTTCTTCTTCTCGCCTCTCCATTTCTCCAAGGTTTGCTCTTTTTCCAGGCTTAGATCTACACGTTTTTTCATCATTTGGGTCTTGCGGATTGGTCTTTTGGAATTATTACTGTTTTATTAGATTTTCGATCTTGTTGTGCGTGTAGGGTTTATGATGGTAATTTTCTGTTTTATTGGCTTCTGGATCTTTGACTTTTAGGGGTTTGATTGTTTCTCTGGTGGATCGGAGGGAGGGAGTTCAGATTATTCATTTTGTATTGGATCGTGTCTTTTCCTATTAGTATTTAGTTGCTCTATCACTGATTTTGATGGTGAAATGAGATTAATTGATTAATTAATCGTTCGTTTGAGGATTGAGGTTGACTATGCTGAGGGATCGTTATCGAAAATTTTATGAATGAAATGGTCTTTAGGAATCTATATTAAATCTGGCTTTGAGTGCATTGGATTTCATTGTTTTAGCGGGTCATTTTACATTTGCTTTGTTGTTTACTTGCTTAACAGCTGCTACATGTCAATCGGACTCTGATGGTGAATCATCTGAGGCTGTTGAAGAAGCTAGTGATCTTGGAGTTGTGGGCGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGCCCTGCTCCAGGAGTTGATACTGTCTGCGTTTTTCCAAAAAACAGTGCACGCAGTAAGTGTTTTTTCTTTGATAGTCATACTTTTATGATATCTATTATTGACATTGAAGTTCATGCCTTCCATTGCAGTTGTGCCTGCTGGTGAAGAGACTGAACTACTCGCCGGAGTGAAAAATGATGGTAAACTAACTTTAATCTGTTCTTTTTAATTTCTGTTCTCTGTTGGCAAAGTGGGTTTTTATCTGAGATTATGTTCTTGACTGTAGTACATTCACTTCTTTAATTGAACTTTGTTCAACTTGGAGTCATGCTTGAATGTAATAACAAAGAAATTAGGCCAGCATTCATTAATTAAACCTTTTATCGCTTACCATTGATCCAAAATCTTATCAGTCAATAATATCCTCGACTGTTATTTGTTAATCCAGGGGAATCGAGCTTGAATGTTATAGCTATTAAGGCCAGCGTTCACTACACTTTTGATCATCGTATGTTGATTCAAAACCTTACTGGACAGGTAAAACTATCCTGACAAGAACAATGTGATTATTAGATAGAGTTGTTGTATGATCTCAACGTTCTCTATTATATTTAATGATTTCAGCATTGTACCACAATTTGATTTGCCTGTGTTTTGATCTCAATCAGTTGAATGCCAAATTTCATAGAGGCGCGATTTGTTGTGCTGGGAAGATTTAGTTTCACTAACTTGTTTATGAAATATGTGTTATGTATTTTGATTTTAAGATCATGAGTTTCATTAAATTTGTAATGGCCCAAGCCTATTGTTAGTAGATATTGTCCTCTTTGAGCTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTAAAAAGCGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTCTGTGATGTCCCATATTGGCTGGGGAGGAGAACAAACCATCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGATGCGTTTTAAAGCCTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGGTGTTACAAATGGTATCAGAGCTAGACACCGGACGATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGATGGTGTGCCAGTAAGGACCCTGGGCCCCAAAGGGGGGTGGATTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGCTAGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAACCCTTGAGGCTAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGATCTGGAGCGTTACAGCTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCATCCCCTTTCGGGGCCCAACGTCTTCGCTAACACTCATTTCCTTCTCCAATCGATGTGGGACCCCCAACCCTCCCTCTTCGGAGCCCATCCTTCCTGGCACACTGCCTCGTGTCCACCCCCATTCGGGGCTTAGCCTCTTTGCTGGCGCATCGCCCGATATCTGTCTCTGATACCATTTGTAATGGCTCAAGCCCACTGCTAACAAATATTGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTACTCTGTTTCCACACCCTTATAAATAATGTTTCGTTTTCCTTCCCAACCGATGTGGGATCTCACAAATTTCTTGTGGAGATCGGAGAACTTGGTAATCTCCTCGAAGAAGACATCAAGACCATTAGAATTCTTTGAGTTTGGCTCATTGGTGTTTGGACATCATTAATTTAGTTGTATGTAATGAATATAGAGTTTGGCTCGTGTTCTTTTCTTCTTTTAGACTGTTATTGGTCAGTGCAAACTTTCTTTTAATATGTTTTGCATGTCAATAGAAACTCTCTTTAGGATATTCATTGCTGGATATCATGCTGCTATTGGTTTGATTCGTATCTGTTGAATTACTATTCCCTCTCTCATCAAGACAATGCTACATAATTTACAACTGAAGTTCAAATTCCTCTCTGATTTATTAATATTGTATTTTAGTACAAGCCTATCTTTCTTTGGTTATAAAGACCAGTTATGAACTTCCAGTTATATTTTCACTTTTCTTAACACAGCTTCTCTTTCGATTAACTTCAGCTCGATAATTTTAACTTATATCATCTTCCTCATTATACTTGTAGGTTTTCCACAACGCAACGGTGCCCCCATCAACCCAAGCTTCTTACCCATACATATTTGCTGTCAGCAAGTTTTTGCAGGTATATTCATCATCGTTATTATAGCAGTTCCTTGTCCTTTCAATATGAATTTTCAGTTTATATACTTACCAACCTGCTTTTCTTTATCAATTTTGTAGTTCGAAAAATCTATAAAATGAAAATAACTTAATATATTCCTGATCTGCAGCCTGGAAACTTTGATCTAGTGGGCACCATCTTTTACGAAATAGACCAGACCGCATACCAAAGCGTCTTCTTTAACGGTACTATCGAAGTCGTTGAAGCCAGTGGTCTCATTAGCATGGAGACTGTGTTTTTAGTTACTCTTGGAATCGCCCTTCTCGTTCTGCTTGGCTTGTGGATTCATGGTCAAATACAGCAAAAACTTTCCAAGGTATAGATCTTTCTTGTCTTCATTTGATGATGACTATGCATTCGAATAGTGGATGTTTACTTATTGTCCCAGCATCAGGGCGTGCAATTTTTTCATCAAATATGTAATCTGAACTGGTTTACAAGTATTTACCGGCCGCCGTTTCTTTTATTAAGAACCATGTTCCTTGCCTTCATACCGAATCCTCTCACGTTAATATGTGGAGTATGAGAAAGGCGGAGCTGCAAGACGTGCATCTTATCTAATTTTAGACATTTCTAGAGATATAAATACTTTTGACATAAAATTCTATGCAATTCCTTGTATCAGAAACCCAAGAGAGTTGCTTCCAAGGTTGAAGTTGGCACAAAAACCATTGACACCTCTATGGATGAGTGGCTTCAGGTTTGTTTTTGTTCCTGAAATTCAAACATGTCTTGAGAAAATCTCAAAACTGCTGCTGATATCTTTTGCAATCTTGTCTCCTCTGATCCTTAGGGAACTGCATTCACTCGATCGTCGAGCAAGTCGAAGAAAAAGAACTAATGACGACTCGTCTCCATCCCAGTTGCATAGTACACTGACAATGTGCAGATTCCTGCAACCCACATTAGGCAGTTGAAGATTTCAGGAGAGAGTCAGGTTGACTAGTTTTGTAAGGAATTCTTCGCATTATCTGTTTCTTAATGCCGATCTGAACTTAAGTTAGTAACGATACAGTTTTTTAAATCTAGAAAAATTTCATTGAAGCACATGATTATCATAGTTGAAACTTTGTTGAATCACCAATGACATGGGGTATGCAGGCCTCATTTCCTTTTGA

mRNA sequence

CGGGTTCTCTTCTCGATTCCCAAATAAAGGTCGCTCATAGATCCCCAAGTTTGACCCTCGAAAATCGAAGCTTGGTCGTCTCTCCCTTTCTCTCTCTAATCGGAGTTTCCTCGATCTACGCTCTTCCGTTCGATTCGCCATTGTCGCCATGAAAACCTTCAGAGTTTTCTTCCTCGCACTTCTTCTTCTCGCCTCTCCATTTCTCCAAGCTGCTACATGTCAATCGGACTCTGATGGTGAATCATCTGAGGCTGTTGAAGAAGCTAGTGATCTTGGAGTTGTGGGCGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGCCCTGCTCCAGGAGTTGATACTGTCTGCGTTTTTCCAAAAAACAGTGCACGCATTGTGCCTGCTGGTGAAGAGACTGAACTACTCGCCGGAGTGAAAAATGATGGGGAATCGAGCTTGAATGTTATAGCTATTAAGGCCAGCGTTCACTACACTTTTGATCATCGTATGTTGATTCAAAACCTTACTGGACAGGTTTTCCACAACGCAACGGTGCCCCCATCAACCCAAGCTTCTTACCCATACATATTTGCTGTCAGCAAGTTTTTGCAGCCTGGAAACTTTGATCTAGTGGGCACCATCTTTTACGAAATAGACCAGACCGCATACCAAAGCGTCTTCTTTAACGGTACTATCGAAGTCGTTGAAGCCAGTGGTCTCATTAGCATGGAGACTGTGTTTTTAGTTACTCTTGGAATCGCCCTTCTCGTTCTGCTTGGCTTGTGGATTCATGGTCAAATACAGCAAAAACTTTCCAAGAAACCCAAGAGAGTTGCTTCCAAGGTTGAAGTTGGCACAAAAACCATTGACACCTCTATGGATGAGTGGCTTCAGGGAACTGCATTCACTCGATCGTCGAGCAAGTCGAAGAAAAAGAACTAATGACGACTCGTCTCCATCCCAGTTGCATAGTACACTGACAATGTGCAGATTCCTGCAACCCACATTAGGCAGTTGAAGATTTCAGGAGAGAGTCAGGTTGACTAGTTTTGTAAGGAATTCTTCGCATTATCTGTTTCTTAATGCCGATCTGAACTTAAGTTAGTAACGATACAGTTTTTTAAATCTAGAAAAATTTCATTGAAGCACATGATTATCATAGTTGAAACTTTGTTGAATCACCAATGACATGGGGTATGCAGGCCTCATTTCCTTTTGA

Coding sequence (CDS)

ATGAAAACCTTCAGAGTTTTCTTCCTCGCACTTCTTCTTCTCGCCTCTCCATTTCTCCAAGCTGCTACATGTCAATCGGACTCTGATGGTGAATCATCTGAGGCTGTTGAAGAAGCTAGTGATCTTGGAGTTGTGGGCGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGCCCTGCTCCAGGAGTTGATACTGTCTGCGTTTTTCCAAAAAACAGTGCACGCATTGTGCCTGCTGGTGAAGAGACTGAACTACTCGCCGGAGTGAAAAATGATGGGGAATCGAGCTTGAATGTTATAGCTATTAAGGCCAGCGTTCACTACACTTTTGATCATCGTATGTTGATTCAAAACCTTACTGGACAGGTTTTCCACAACGCAACGGTGCCCCCATCAACCCAAGCTTCTTACCCATACATATTTGCTGTCAGCAAGTTTTTGCAGCCTGGAAACTTTGATCTAGTGGGCACCATCTTTTACGAAATAGACCAGACCGCATACCAAAGCGTCTTCTTTAACGGTACTATCGAAGTCGTTGAAGCCAGTGGTCTCATTAGCATGGAGACTGTGTTTTTAGTTACTCTTGGAATCGCCCTTCTCGTTCTGCTTGGCTTGTGGATTCATGGTCAAATACAGCAAAAACTTTCCAAGAAACCCAAGAGAGTTGCTTCCAAGGTTGAAGTTGGCACAAAAACCATTGACACCTCTATGGATGAGTGGCTTCAGGGAACTGCATTCACTCGATCGTCGAGCAAGTCGAAGAAAAAGAACTAA

Protein sequence

MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNLTGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVVEASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDEWLQGTAFTRSSSKSKKKN
Homology
[Close]
BLAST of Carg19366 vs. NCBI nr
Match: XP_023553718.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.3 bits (1261), Expect = 3.9e-135
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASD+G+VGEEDSQDFGEVNFGP
Sbjct: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDIGIVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKAS+HYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATVPPS QASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE
Sbjct: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAFTRSSSKSKKKN 259
           WLQGTAFTRSSSKSKKKN
Sbjct: 241 WLQGTAFTRSSSKSKKKN 258

[Close]
BLAST of Carg19366 vs. NCBI nr
Match: XP_022969509.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima])

HSP 1 Score: 489.6 bits (1259), Expect = 6.6e-135
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           MKTFRVFFLALLLLASPFLQAAT QSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP
Sbjct: 1   MKTFRVFFLALLLLASPFLQAATSQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+IAIKASVHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV
Sbjct: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE
Sbjct: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAFTRSSSKSKKKN 259
           WLQGTAFTRSSSKSKKKN
Sbjct: 241 WLQGTAFTRSSSKSKKKN 258

[Close]
BLAST of Carg19366 vs. NCBI nr
Match: XP_022952473.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata])

HSP 1 Score: 488.8 bits (1257), Expect = 1.1e-134
Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           MKTFRVFFLALLLLASPFLQAATCQSDSD ESSE VEEASDLGVVGEEDSQDFGEVNFGP
Sbjct: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDVESSEVVEEASDLGVVGEEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV
Sbjct: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE
Sbjct: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAFTRSSSKSKKKN 259
           WLQGTAFTRSSSKSKKKN
Sbjct: 241 WLQGTAFTRSSSKSKKKN 258

[Close]
BLAST of Carg19366 vs. NCBI nr
Match: XP_008447984.1 (PREDICTED: translocon-associated protein subunit alpha-like [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 9.0e-124
Identity = 232/259 (89.58%), Postives = 250/259 (96.53%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           M TFRVFFLALLLLASPFL+AATCQ+DSD E+SEAVEE SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKNDGESSLN+IAIKAS+HYTFDHR+LIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRLLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATVPPS QASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKTIDTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAFTRS-SSKSKKKN 259
           WLQGTA+T+S S+K KKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]
BLAST of Carg19366 vs. NCBI nr
Match: XP_004144834.1 (PREDICTED: translocon-associated protein subunit alpha-like [Cucumis sativus] >KGN43228.1 hypothetical protein Csa_7G009720 [Cucumis sativus])

HSP 1 Score: 448.7 bits (1153), Expect = 1.3e-122
Identity = 230/259 (88.80%), Postives = 250/259 (96.53%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           M +FR+FFLALLLLASPFL+AATCQSDSD ESSEAVE+ SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLN+IAIKAS+HYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATV PSTQASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240

Query: 241 WLQGTAFTRS-SSKSKKKN 259
           WLQGTA+T+S S+K KKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]
BLAST of Carg19366 vs. TAIR10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit)

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-74
Identity = 152/261 (58.24%), Postives = 201/261 (77.01%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESS---EAVEEASDLGVVGEEDSQDFGEVN 60
           M   RV FLALLLLASP LQ A CQSD++  SS   + V E +D  V  EED  D  ++N
Sbjct: 1   MMNLRVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAV--EEDDHDL-DMN 60

Query: 61  FGPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLI 120
               PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ + V+ I+ASVH  +DH++L+
Sbjct: 61  LSSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLV 120

Query: 121 QNLTGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTI 180
           QNLT    +NA++P S QA++PYIFAVS++LQPG FDLVG I Y+++   YQSVF+NGTI
Sbjct: 121 QNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTI 180

Query: 181 EVVEASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTS 240
           EVVE+ GL+S E+VFL+TLGI LL+LLGLW + Q+ Q+L+KK K+V SKVEVGT++ + S
Sbjct: 181 EVVESGGLLSGESVFLLTLGIGLLLLLGLWAYSQV-QRLTKKTKKV-SKVEVGTRSTEAS 240

Query: 241 MDEWLQGTAFTRSSS-KSKKK 258
           +DEWL+GT   ++SS K+K K
Sbjct: 241 LDEWLEGTTLAKTSSGKTKNK 256

[Close]
BLAST of Carg19366 vs. TAIR10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit)

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-65
Identity = 139/255 (54.51%), Postives = 182/255 (71.37%), Query Frame = 0 

Query: 3   TFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGPAP 62
           +FR+ F A LLL SPFL+ A CQSDS+    ++  E SD+G   E D+++   +    AP
Sbjct: 4   SFRLLFFAFLLLVSPFLKVALCQSDSE----DSGFEVSDVG-EEESDAEEVFGLELTSAP 63

Query: 63  GVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNLTG 122
           G++T+CVFPKNSA+I+ AG ETELL G+KNDG+S+++++A+K S+H  FD    +QNLT 
Sbjct: 64  GIETLCVFPKNSAKIIKAGVETELLVGMKNDGQSNVDIVAVKGSLHLPFDQN-AVQNLTA 123

Query: 123 QVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVVEA 182
             F NA+VP S QA+ PY FAVSKFLQ G FD VGTI YEID   YQS+F+NGTIEVVE 
Sbjct: 124 LSFSNASVPTSAQATLPYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVVED 183

Query: 183 SGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDEWL 242
             L  ME+VFL  L I ++  L ++I   + + ++KK KR A KVEVGT T D S DEWL
Sbjct: 184 GPLFRMESVFLSGLLIFVIAFLAIYIQ-NVLKHMTKKTKR-APKVEVGTATKDASHDEWL 243

Query: 243 QGTAFTRSSSKSKKK 258
           +GT++T+SSSKSKKK
Sbjct: 244 EGTSYTQSSSKSKKK 250

[Close]
BLAST of Carg19366 vs. Swiss-Prot
Match: sp|P45434|SSRA_ARATH (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 276.6 bits (706), Expect = 2.9e-73
Identity = 152/261 (58.24%), Postives = 201/261 (77.01%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESS---EAVEEASDLGVVGEEDSQDFGEVN 60
           M   RV FLALLLLASP LQ A CQSD++  SS   + V E +D  V  EED  D  ++N
Sbjct: 1   MMNLRVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAV--EEDDHDL-DMN 60

Query: 61  FGPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLI 120
               PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ + V+ I+ASVH  +DH++L+
Sbjct: 61  LSSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLV 120

Query: 121 QNLTGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTI 180
           QNLT    +NA++P S QA++PYIFAVS++LQPG FDLVG I Y+++   YQSVF+NGTI
Sbjct: 121 QNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTI 180

Query: 181 EVVEASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTS 240
           EVVE+ GL+S E+VFL+TLGI LL+LLGLW + Q+ Q+L+KK K+V SKVEVGT++ + S
Sbjct: 181 EVVESGGLLSGESVFLLTLGIGLLLLLGLWAYSQV-QRLTKKTKKV-SKVEVGTRSTEAS 240

Query: 241 MDEWLQGTAFTRSSS-KSKKK 258
           +DEWL+GT   ++SS K+K K
Sbjct: 241 LDEWLEGTTLAKTSSGKTKNK 256

[Close]
BLAST of Carg19366 vs. Swiss-Prot
Match: sp|Q54R45|SSRA_DICDI (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16
Identity = 60/200 (30.00%), Postives = 98/200 (49.00%), Query Frame = 0 

Query: 60  PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQN 119
           P   V    +FP N  +   AG   E+L G  N+ + +LN+  I AS+++  D  + IQN
Sbjct: 35  PTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQN 94

Query: 120 LTGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEV 179
            T   F    V     A+  Y F  S++L+P  F L+ ++ Y+     +   FFN TI +
Sbjct: 95  YTRGDF-GIAVEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINI 154

Query: 180 VEASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMD 239
            E      M++ FL+ LG+  +  +G  ++G++ +   +K  R  SKV      ++T  +
Sbjct: 155 TEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPK---QKKVRTVSKVNKNAVRVETEDE 214

Query: 240 --EWLQGTAFTRSSSKSKKK 258
             EWL GT+   S  KS +K
Sbjct: 215 TAEWLSGTSAASSKVKSVQK 230

[Close]
BLAST of Carg19366 vs. Swiss-Prot
Match: sp|P43307|SSRA_HUMAN (Translocon-associated protein subunit alpha OS=Homo sapiens OX=9606 GN=SSR1 PE=1 SV=3)

HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12
Identity = 59/200 (29.50%), Postives = 95/200 (47.50%), Query Frame = 0 

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           +P  DT  +F K      PA    + L G  N G     V ++ AS  Y  D++  IQN 
Sbjct: 80  SPSADTTILFVKGED--FPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNF 139

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFY-EIDQTAYQSVFFNGTIEV 180
           T     N  VPP  QA++ Y F  ++ +    F LV  + Y +++   +Q   FN T+ V
Sbjct: 140 TALPL-NTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTV 199

Query: 181 VEASGLISMETVFLVTL--GIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTS 240
           +E    +  ET+F+     G+ LLV++GL  H  ++   S+K KR   KVE+GT + +  
Sbjct: 200 IEREDGLDGETIFMYMFLAGLGLLVIVGL--HQLLE---SRKRKRPIQKVEMGTSSQNDV 259

Query: 241 MDEWLQGTAFTRSSSKSKKK 258
              W+      + +  S ++
Sbjct: 260 DMSWIPQETLNQINKASPRR 271

[Close]
BLAST of Carg19366 vs. TrEMBL
Match: tr|A0A1S3BIP9|A0A1S3BIP9_CUCME (translocon-associated protein subunit alpha-like OS=Cucumis melo OX=3656 GN=LOC103490305 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.9e-124
Identity = 232/259 (89.58%), Postives = 250/259 (96.53%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           M TFRVFFLALLLLASPFL+AATCQ+DSD E+SEAVEE SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MNTFRVFFLALLLLASPFLKAATCQADSDVEASEAVEEVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKNDGESSLN+IAIKAS+HYTFDHR+LIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNDGESSLNIIAIKASIHYTFDHRLLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATVPPS QASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVPPSAQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKTIDTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTIDTSMDE 240

Query: 241 WLQGTAFTRS-SSKSKKKN 259
           WLQGTA+T+S S+K KKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]
BLAST of Carg19366 vs. TrEMBL
Match: tr|A0A0A0K182|A0A0A0K182_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009720 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 8.6e-123
Identity = 230/259 (88.80%), Postives = 250/259 (96.53%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           M +FR+FFLALLLLASPFL+AATCQSDSD ESSEAVE+ SDLG+VG+EDSQDFGEVNFGP
Sbjct: 1   MNSFRLFFLALLLLASPFLKAATCQSDSDVESSEAVEDVSDLGIVGDEDSQDFGEVNFGP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLN+IAIKAS+HYTFDHRMLIQNL
Sbjct: 61  APGVDTVCVFPKNSARIVPAGEETQLLAGVKNNGESSLNIIAIKASIHYTFDHRMLIQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           TGQVFHNATV PSTQASYPYIFAVSK+LQPGNFDLVGTIFYEIDQ AYQS+F+NGTIEVV
Sbjct: 121 TGQVFHNATVTPSTQASYPYIFAVSKYLQPGNFDLVGTIFYEIDQNAYQSIFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EASG+ISME+VFLV+LGIALLVLL LWIHGQIQQKLSKKPKR ASKVEVGTKT+DTSMDE
Sbjct: 181 EASGIISMESVFLVSLGIALLVLLVLWIHGQIQQKLSKKPKRAASKVEVGTKTVDTSMDE 240

Query: 241 WLQGTAFTRS-SSKSKKKN 259
           WLQGTA+T+S S+K KKKN
Sbjct: 241 WLQGTAYTKSGSNKLKKKN 259

[Close]
BLAST of Carg19366 vs. TrEMBL
Match: tr|A0A067JXN5|A0A067JXN5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19588 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 3.9e-99
Identity = 194/258 (75.19%), Postives = 221/258 (85.66%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           MK   VFF ALLLLASP LQ A CQSDSD E ++A EE SDLG+VG ED+QDFG+  F P
Sbjct: 1   MKNLSVFFFALLLLASPLLQVARCQSDSDVEVTDAAEEVSDLGIVG-EDAQDFGDGTFSP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGV+TVCVFPKNSAR+VPAGEE ELL G+KNDGESS+N+IA+KASVH  FDHR+L+QNL
Sbjct: 61  APGVETVCVFPKNSARVVPAGEEAELLVGIKNDGESSINIIAVKASVHLPFDHRLLVQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           T Q F+NATVPPSTQA++PY+FAVSK+LQPGNFDLVG+I YEIDQ  YQS F+NGTIEVV
Sbjct: 121 TAQAFNNATVPPSTQATFPYVFAVSKYLQPGNFDLVGSIIYEIDQQGYQSTFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           E+ G +S+E+VFLVTLGIALLVL GLWIHGQ+ Q LSKK KR A KVEVGT T D SMDE
Sbjct: 181 ESGGFLSIESVFLVTLGIALLVLFGLWIHGQV-QNLSKKTKR-APKVEVGTGTRDASMDE 240

Query: 241 WLQGTAFTRS-SSKSKKK 258
           WLQGTA+T+S SSKSKKK
Sbjct: 241 WLQGTAYTQSLSSKSKKK 255

[Close]
BLAST of Carg19366 vs. TrEMBL
Match: tr|A0A2I4EWV8|A0A2I4EWV8_9ROSI (translocon-associated protein subunit alpha-like OS=Juglans regia OX=51240 GN=LOC108993420 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 9.6e-98
Identity = 193/258 (74.81%), Postives = 223/258 (86.43%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           +K  RVFFLALLLLASPF+Q A CQSDS+ ES+EAVEE  DLG+VG ED QDFG+ NF P
Sbjct: 3   LKNVRVFFLALLLLASPFVQVARCQSDSEVESTEAVEEVGDLGIVG-EDVQDFGDENFSP 62

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGV T+CVFPKNSAR+VPAGEETELL G+KNDGES++NVIAIKAS+H  FDH++L+QNL
Sbjct: 63  APGVSTICVFPKNSARVVPAGEETELLVGMKNDGESTVNVIAIKASIHLPFDHQLLVQNL 122

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           T Q F+NA+VP S Q+++PYIFAVSKFLQPG FDLVGTI YEIDQ  YQ+ F+NGTIEVV
Sbjct: 123 TAQAFNNASVPASAQSTFPYIFAVSKFLQPGTFDLVGTIVYEIDQNPYQNTFYNGTIEVV 182

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           EA  L+S+E+VFLVTLGIALLVLLG+W+ GQI + LSKK KR A KVEVGTKT D SMDE
Sbjct: 183 EAGNLLSIESVFLVTLGIALLVLLGVWVRGQI-KNLSKKTKR-APKVEVGTKTTDASMDE 242

Query: 241 WLQGTAFTRS-SSKSKKK 258
           WLQGTA+T+S SSKSKKK
Sbjct: 243 WLQGTAYTQSLSSKSKKK 257

[Close]
BLAST of Carg19366 vs. TrEMBL
Match: tr|A0A2C9UZR3|A0A2C9UZR3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G090100 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.8e-97
Identity = 194/258 (75.19%), Postives = 220/258 (85.27%), Query Frame = 0 

Query: 1   MKTFRVFFLALLLLASPFLQAATCQSDSDGESSEAVEEASDLGVVGEEDSQDFGEVNFGP 60
           M   RVFF A LL+ASP LQ + CQSDS+ E  EA EE SDLG+VG ED+Q FG+ ++ P
Sbjct: 1   MNNIRVFFFAFLLVASPLLQVSHCQSDSEEEVMEAAEEVSDLGIVG-EDTQYFGDGSYSP 60

Query: 61  APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNVIAIKASVHYTFDHRMLIQNL 120
           APGVDTVCVFPKNSAR+VPAGEE ELL G+KNDGESS+NVIAIKASVH  FDHRML+QNL
Sbjct: 61  APGVDTVCVFPKNSARLVPAGEEAELLVGLKNDGESSINVIAIKASVHLPFDHRMLVQNL 120

Query: 121 TGQVFHNATVPPSTQASYPYIFAVSKFLQPGNFDLVGTIFYEIDQTAYQSVFFNGTIEVV 180
           T Q F+NATVP STQA++PY+FAVSK+LQPGNFDLVGTIFYEIDQ  YQS F+NGTIEVV
Sbjct: 121 TAQPFNNATVPASTQATFPYVFAVSKYLQPGNFDLVGTIFYEIDQHPYQSTFYNGTIEVV 180

Query: 181 EASGLISMETVFLVTLGIALLVLLGLWIHGQIQQKLSKKPKRVASKVEVGTKTIDTSMDE 240
           E+ G +S+E+VFLVTLG+ALLVLLGLWIHGQI Q LSKK KR A KVE+GT T D SMDE
Sbjct: 181 ESGGFLSVESVFLVTLGVALLVLLGLWIHGQI-QNLSKKTKR-APKVEIGTGTRDASMDE 240

Query: 241 WLQGTAFTRS-SSKSKKK 258
           WLQGTA+T+S SSKSKKK
Sbjct: 241 WLQGTAYTQSISSKSKKK 255

The following BLAST results are available for this feature:
BLAST of Carg19366 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553718.13.9e-13598.45translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo][more]
XP_022969509.16.6e-13599.22translocon-associated protein subunit alpha-like [Cucurbita maxima][more]
XP_022952473.11.1e-13499.22translocon-associated protein subunit alpha-like [Cucurbita moschata][more]
XP_008447984.19.0e-12489.58PREDICTED: translocon-associated protein subunit alpha-like [Cucumis melo][more]
XP_004144834.11.3e-12288.80PREDICTED: translocon-associated protein subunit alpha-like [Cucumis sativus] >K... [more]
BLAST of Carg19366 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G21160.11.6e-7458.24Translocon-associated protein (TRAP), alpha subunit[more]
AT2G16595.16.7e-6554.51Translocon-associated protein (TRAP), alpha subunit[more]
BLAST of Carg19366 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P45434|SSRA_ARATH2.9e-7358.24Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A... [more]
sp|Q54R45|SSRA_DICDI1.9e-1630.00Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689... [more]
sp|P43307|SSRA_HUMAN2.2e-1229.50Translocon-associated protein subunit alpha OS=Homo sapiens OX=9606 GN=SSR1 PE=1... [more]
BLAST of Carg19366 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BIP9|A0A1S3BIP9_CUCME5.9e-12489.58translocon-associated protein subunit alpha-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0K182|A0A0A0K182_CUCSA8.6e-12388.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009720 PE=4 SV=1[more]
tr|A0A067JXN5|A0A067JXN5_JATCU3.9e-9975.19Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19588 PE=4 SV=1[more]
tr|A0A2I4EWV8|A0A2I4EWV8_9ROSI9.6e-9874.81translocon-associated protein subunit alpha-like OS=Juglans regia OX=51240 GN=LO... [more]
tr|A0A2C9UZR3|A0A2C9UZR3_MANES2.8e-9775.19Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G090100 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
Vocabulary: INTERPRO
TermDefinition
IPR005595TRAP_alpha
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19366-RACarg19366-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005595Translocon-associated protein (TRAP), alpha subunitPFAMPF03896TRAP_alphacoord: 27..244
e-value: 8.7E-29
score: 100.5
NoneNo IPR availablePANTHERPTHR12924TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNITcoord: 5..257

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19366Cla001677Watermelon (97103) v1carwmB0306
Carg19366Csa2G263930Cucumber (Chinese Long) v2carcuB0341
Carg19366Csa7G009720Cucumber (Chinese Long) v2carcuB0342
Carg19366MELO3C020784Melon (DHL92) v3.5.1carmeB0319
Carg19366MELO3C013377Melon (DHL92) v3.5.1carmeB0321
Carg19366ClCG02G011530Watermelon (Charleston Gray)carwcgB0309
Carg19366CSPI07G00770Wild cucumber (PI 183967)carcpiB0348
Carg19366CSPI02G13160Wild cucumber (PI 183967)carcpiB0347
Carg19366Cucsa.381830Cucumber (Gy14) v1carcgyB0373
Carg19366CmaCh19G007240Cucurbita maxima (Rimu)carcmaB0440
Carg19366CmaCh11G013950Cucurbita maxima (Rimu)carcmaB0439
Carg19366CmaCh02G003270Cucurbita maxima (Rimu)carcmaB0442
Carg19366CmaCh20G007690Cucurbita maxima (Rimu)carcmaB0441
Carg19366CmoCh11G017250Cucurbita moschata (Rifu)carcmoB0432
Carg19366CmoCh20G007680Cucurbita moschata (Rifu)carcmoB0435
Carg19366CmoCh02G003220Cucurbita moschata (Rifu)carcmoB0436
Carg19366CmoCh19G007330Cucurbita moschata (Rifu)carcmoB0433
Carg19366Lsi11G011810Bottle gourd (USVL1VR-Ls)carlsiB290
Carg19366Lsi10G004640Bottle gourd (USVL1VR-Ls)carlsiB289
Carg19366Cp4.1LG04g05020Cucurbita pepo (Zucchini)carcpeB0439
Carg19366Cp4.1LG16g03000Cucurbita pepo (Zucchini)carcpeB0437
Carg19366Cp4.1LG15g05750Cucurbita pepo (Zucchini)carcpeB0436
Carg19366Cp4.1LG05g13080Cucurbita pepo (Zucchini)carcpeB0440
Carg19366CsGy2G013110Cucumber (Gy14) v2carcgybB0325
Carg19366CsGy7G000620Cucumber (Gy14) v2carcgybB0326
Carg19366MELO3C020784.2Melon (DHL92) v3.6.1carmedB0328
Carg19366MELO3C013377.2Melon (DHL92) v3.6.1carmedB0330
Carg19366CsaV3_7G000800Cucumber (Chinese Long) v3carcucB0347
Carg19366CsaV3_2G015720Cucumber (Chinese Long) v3carcucB0346
Carg19366Cla97C02G037210Watermelon (97103) v2carwmbB0325
Carg19366Bhi05G001497Wax gourdcarwgoB0397
Carg19366Bhi10G001503Wax gourdcarwgoB0400
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19366Carg05693Silver-seed gourdcarcarB343
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19366Silver-seed gourdcarcarB342
Carg19366Cucurbita maxima (Rimu)carcmaB0443
Carg19366Watermelon (Charleston Gray)carwcgB0308
Carg19366Watermelon (97103) v1carwmB0305
Carg19366Watermelon (97103) v2carwmbB0324