Carg19356 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCGTGGCGGTTCATGGCCAAAGGATGAGCTTTGGAGGTCGCATTATCAAATTGGGAGCAGATTTTTGCGAAGTTCGAGGTATGCACTTGACTTTTCTTCTCTCGTCTGCTAACTATAATATCCAATCCCATCGTTTCTTCATCTTCTTCTTCTTCATCAGGTATCCTCTCTACTGTACGAAGCAACGCCTTTCGTTTTGCTGCTCTGTAATGGCGTTACCGGTCGTAGATACAGAGTACCTTAAGGAGATCGATAAGGCTCGCCGTCACCTCCGCTCTCTCATTGCCAACCGGAACTGTGCACCGATCATGCTTCGTCTGGCGTATGCTCTCTCAACATTCACCTTGATTGTCTATTTTCAAGTATTGGAATAATCGTTGTATGTATCGGATTGTTATTTCTCTCATTTCATTTCTCTTGCGAGTTCGGTTGTGTAAATGAAGGAGACGGACGGTTCCTTTAGGATTCTGTGGTTGAGTTGCTTGTTGTTATTCCTTCTGTGCTGGTTCTTGCTGGACTTGCATGGTCAAAATAGGAGTTCGCCAGTTTTGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTGAATGAAGTTTTGCTTTCTCTCTGATTTTCTTGGAGTGATTTCTGACGAAGGATTCGATGTTTCTAACACTGTGCCGTCTTTTGAAGTTGGCACGACGCTGGCACGTACGATGTGAGTACGAAAACTGGAGGGCCTAATGGTTCGATTAGGAACGCGGAGGAGTATTCTCACGGGTCTAACAATGGACTGAAAAAAGCTATTGATTTTTGTGGTATGCCAGTGGTTTCTTCTTTGCGTTGAGGTTCATGTAAACTGAAAGTCAATCAATTAAGCTATCTGAGTATGGTTCGAAGTATCTTTGTTGTTGTAGTTTCGAAATTATATTGGAGCCATATCGTGGTTTTTTATTTACCGAGAATGTCCACTAAATATTGCAAATTAACATATTTGACTTACACTTGTTTTTCTTCTTTAATAACAGAGGAAGTGAAGTATAAACATCCGAAGATTACTTATGCAGACCTGTACCAGGTAACTGAAATACTTATGCAGACCTGTACCAGGTAACTGAAACTGTCACGGTAGTATAGATATGCCTGCAGTTTTGTAATTTTACCAATTCTGATTCATCCTATTTTAGGTGGAATGGATTCTGCATGTAAGGAACTGTATGTGTTTTAAATTTTAGCGTGAGAAGTACGTTAGAAATATGTTGTGATTGACCAATGATATATTAATCGAAATTAGATGAAAAGCTCCACAATGGTTAAGCACTTCTACTGTCGTTAAGCGTTTCAACTTCACTCTTTGTTAATCTTAGCGTGAGAAATATTTTGTCATTGAAATTTTATTAGCATAGCAGATTCATACTGTGATTTCTGATCCCTTTGTAGTGGATAAGATTCATGCCTCTTTCAAATTCACATGCTATACATGTCTAAGTTTGTATTTTAACAAACAAGTTTACATTTGCTTCTTCATAACTCCTAGATAAAAGCTTAATGAAAAAGTGAAAATTGTAATAAGAAGACTTTATAAACCAGTGACAGTCGAGAAATTTTTTAAAACTGTATGTCCTGTAATGTAATTAGTATTGTTGAATCTTTTTGGCAAAAATAAACTATTATGATTTAAGTTGCATTTGGAGTTGGTGAGCAATTGGCTTCAATCGCTGTTTACATGAACTTCCCACCTCCAATAAAATAAGGGAAAAGAAAACATCATCTGGGCCCCAAATGTTGGATGTGAATTCTTAATATATTTGTTCCAATTGCCTCTGTGAGCGAAAGGTGACACCCATGGGTACTGAAGTACCCAGTGGTGAGTGTAAATGTTAGGCAAAGGCAGATGCAAAAATTTCAGGAAATCATCTTTCCAAATCTTAGTATCAATAATTGTTTCTTTCTTACACATTCACCAAGGCAGACTCAGAGATGGTCGTGTATTATTATGCATCTACTATGGAGGTTATCAAGCGTACTCAATTCATCAATGCTATTAAGCTTTTTACAATCCCCTAAGATCTGATAGTGTTTAAAATATACTCAATTCAGCTAGCTGGTGTTGTTGCTGTCGAGGTCACTGGAGGCCCGACTATTGACTTTGTTCCTGGTAGAAAGGTAGAGTAATTTATTTGTTTACTTTATGAATGTAGCATCTGATGGTTTTATCATCTGTTCCAGTAACATCTGAATCCTTGGTTCTCAGGATTCGAACATTTGTCCCAGGGAAGGCCGACTTCCTGATGCTAAAAAAGGTATAATAATTGTGTTATTTTGTCTGTAGCTTCCTGCAGTCCTGCAAATTGAACGATATCTGAATGCCTTTTCTGCATCTAGCTATGTACTGTGAATGCAAAAATATTAGGGTTGAGTTTCTAGCTAACTGGTTTAATATAATCATTATATTTTACAATCATTTGTCAAAGAGGAGAAAATGAAGATCTGTATTTTTTTATAGTGTTTTTTTAGTTGCACAATTTGCTGTCAAATTGTGGCTCTTGTGTTTAAGATGAAAGTAAAGCTGTTAGAGGTTCGATATGTAATCATAAGTGTCAGTGCCACAACCTTGAATGTGATTTAATCATGTTGACAATGCTATCACAGTTTATGCTTTTCGACATGATAATTCGTATTTGAACTGTGCTTTTTTAATAAAATAACTTGTCGTATTTATTTGTATTTTACTGGAAGTTGCTTCTTAATTTCTCCTGGGGTTTAATGATAATGATACATTCAGATTCTACAAACTTTTGTGCATTCTTGCTGTGATGCTCAAGTTTTGGTAGGAAATTGTCACTTATCGGACTTGATATTTTAAACGATAGCCATTTTCTAATTTTGGTGATAGGTGCACCGCATCTGCGTGACATCTTTTATAGGATGGGTCTGTCTGACAAAGATATTGTTGCATTGTCTGGGGGTCACACTTTGGTAATTTCTTCACACATTTTTATTCTTGCATGTCTTTATTATCGTTTAACTAATTGAATCATATGTTGTGAATTCTGATGTTATAGGGAAGAGCACATCCGGAGAGATCTGGTTTTGATGGACCTTGGACAGAGGATCCTCTGAAGTTTGATAACTCATACTTTGTGTAGGACTTCAGCTACATCTTAGGCTAATCCTTGTATCATCTTATTAGGCCATATAAGGTGTTATTTCTGATTGTTGCCAATTTGATGTTAATAGGGAACTGTTGAAAGGTGAATCAGAGGGACTATTAAAACTTCCCACGGACAAGGCTTTACTTGAAGATCCTGAATTCCGCCAATATGTGGAATTGTATGCAAAAGTAAGGTCTTATTTTATGCATTATGGACTAGCGGGAAATTTTACTATTTTGCTATCCTAAGAGGAAACTAAAAGATTTTTTTATGCCTAATCCGATCTCTAAATAAATAGTCCGCTTGGTCTGGACTATAGATGTAACAGCCCAAGCCCACCGTTTCTTTTGGGTTTCCGCTCAAAGTTTTTTAAAACGCGTCTGCTAGGGAGAGGTTCCCACACCCTTATAAAGAATGATTTGTTTTCCTCCTCAATCGATGGAAGATCTCACAATAATATTTGTTAAAAGGACAATTTTTGCAGTCTCTAACCATTCACAATTACCATTGATAGAACTTCAGAATTGGCCAATGTGTATAGTACTTCTCAGCTACCAGATGTATGAACCATTTCTTATTCTATTTTCGTCAATTTCTACAGGATGAAGATGTATTCTTCCAAGATTATGCTGAATCACACAAGAAACTTTCAGAGCTAGGGTTCACTCCAGGTTCTGCTAAACCAATTGTGAAGGACAGCACAGTATTGGCTCAGGGTGCCGTTGGAGCCGCGGTTGCAGCTGCTGTGGTAATTCTGAGCTACTTATACGAAATTCGCAAAAAATCGAAGTAA CGCGTGGCGGTTCATGGCCAAAGGATGAGCTTTGGAGGTCGCATTATCAAATTGGGAGCAGATTTTTGCGAAGTTCGAGGTATGCACTTGACTTTTCTTCTCTCGTCTGCTAACTATAATATCCAATCCCATCGTTTCTTCATCTTCTTCTTCTTCATCAGGTATCCTCTCTACTGTACGAAGCAACGCCTTTCGTTTTGCTGCTCTGTAATGGCGTTACCGGTCGTAGATACAGAGTACCTTAAGGAGATCGATAAGGCTCGCCGTCACCTCCGCTCTCTCATTGCCAACCGGAACTGTGCACCGATCATGCTTCGTCTGGCTTGGCACGACGCTGGCACGTACGATGTGAGTACGAAAACTGGAGGGCCTAATGGTTCGATTAGGAACGCGGAGGAGTATTCTCACGGGTCTAACAATGGACTGAAAAAAGCTATTGATTTTTGTGAGGAAGTGAAGTATAAACATCCGAAGATTACTTATGCAGACCTGTACCAGCTAGCTGGTGTTGTTGCTGTCGAGGTCACTGGAGGCCCGACTATTGACTTTGTTCCTGGTAGAAAGGATTCGAACATTTGTCCCAGGGAAGGCCGACTTCCTGATGCTAAAAAAGGTGCACCGCATCTGCGTGACATCTTTTATAGGATGGGTCTGTCTGACAAAGATATTGTTGCATTGTCTGGGGGTCACACTTTGGGAAGAGCACATCCGGAGAGATCTGGTTTTGATGGACCTTGGACAGAGGATCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTGTTGAAAGGTGAATCAGAGGGACTATTAAAACTTCCCACGGACAAGGCTTTACTTGAAGATCCTGAATTCCGCCAATATGTGGAATTGTATGCAAAAGATGAAGATGTATTCTTCCAAGATTATGCTGAATCACACAAGAAACTTTCAGAGCTAGGGTTCACTCCAGGTTCTGCTAAACCAATTGTGAAGGACAGCACAGTATTGGCTCAGGGTGCCGTTGGAGCCGCGGTTGCAGCTGCTGTGGTAATTCTGAGCTACTTATACGAAATTCGCAAAAAATCGAAGTAA CGCGTGGCGGTTCATGGCCAAAGGATGAGCTTTGGAGGTCGCATTATCAAATTGGGAGCAGATTTTTGCGAAGTTCGAGGTATGCACTTGACTTTTCTTCTCTCGTCTGCTAACTATAATATCCAATCCCATCGTTTCTTCATCTTCTTCTTCTTCATCAGGTATCCTCTCTACTGTACGAAGCAACGCCTTTCGTTTTGCTGCTCTGTAATGGCGTTACCGGTCGTAGATACAGAGTACCTTAAGGAGATCGATAAGGCTCGCCGTCACCTCCGCTCTCTCATTGCCAACCGGAACTGTGCACCGATCATGCTTCGTCTGGCTTGGCACGACGCTGGCACGTACGATGTGAGTACGAAAACTGGAGGGCCTAATGGTTCGATTAGGAACGCGGAGGAGTATTCTCACGGGTCTAACAATGGACTGAAAAAAGCTATTGATTTTTGTGAGGAAGTGAAGTATAAACATCCGAAGATTACTTATGCAGACCTGTACCAGCTAGCTGGTGTTGTTGCTGTCGAGGTCACTGGAGGCCCGACTATTGACTTTGTTCCTGGTAGAAAGGATTCGAACATTTGTCCCAGGGAAGGCCGACTTCCTGATGCTAAAAAAGGTGCACCGCATCTGCGTGACATCTTTTATAGGATGGGTCTGTCTGACAAAGATATTGTTGCATTGTCTGGGGGTCACACTTTGGGAAGAGCACATCCGGAGAGATCTGGTTTTGATGGACCTTGGACAGAGGATCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTGTTGAAAGGTGAATCAGAGGGACTATTAAAACTTCCCACGGACAAGGCTTTACTTGAAGATCCTGAATTCCGCCAATATGTGGAATTGTATGCAAAAGATGAAGATGTATTCTTCCAAGATTATGCTGAATCACACAAGAAACTTTCAGAGCTAGGGTTCACTCCAGGTTCTGCTAAACCAATTGTGAAGGACAGCACAGTATTGGCTCAGGGTGCCGTTGGAGCCGCGGTTGCAGCTGCTGTGGTAATTCTGAGCTACTTATACGAAATTCGCAAAAAATCGAAGTAA RVAVHGQRMSFGGRIIKLGADFCEVRGMHLTFLLSSANYNIQSHRFFIFFFFIRYPLYCTKQRLSFCCSVMALPVVDTEYLKEIDKARRHLRSLIANRNCAPIMLRLAWHDAGTYDVSTKTGGPNGSIRNAEEYSHGSNNGLKKAIDFCEEVKYKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNICPREGRLPDAKKGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTEDPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRQYVELYAKDEDVFFQDYAESHKKLSELGFTPGSAKPIVKDSTVLAQGAVGAAVAAAVVILSYLYEIRKKSK
BLAST of Carg19356 vs. NCBI nr
Match: AXF54207.1 (POD8 [Cucurbita pepo]) HSP 1 Score: 659.1 bits (1699), Expect = 8.7e-186 Identity = 325/328 (99.09%), Postives = 326/328 (99.39%), Query Frame = 0
BLAST of Carg19356 vs. NCBI nr
Match: XP_022952468.1 (L-ascorbate peroxidase 3-like [Cucurbita moschata] >XP_023554246.1 L-ascorbate peroxidase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 580.9 bits (1496), Expect = 3.0e-162 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Carg19356 vs. NCBI nr
Match: XP_022969503.1 (L-ascorbate peroxidase 3-like [Cucurbita maxima]) HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161 Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 0
BLAST of Carg19356 vs. NCBI nr
Match: XP_008447964.1 (PREDICTED: L-ascorbate peroxidase 3, peroxisomal [Cucumis melo]) HSP 1 Score: 550.1 bits (1416), Expect = 5.7e-153 Identity = 270/286 (94.41%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Carg19356 vs. NCBI nr
Match: XP_004144841.2 (PREDICTED: L-ascorbate peroxidase 3, peroxisomal [Cucumis sativus]) HSP 1 Score: 548.1 bits (1411), Expect = 2.2e-152 Identity = 269/286 (94.06%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Carg19356 vs. TAIR10
Match: AT4G35000.1 (ascorbate peroxidase 3) HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-136 Identity = 236/287 (82.23%), Postives = 254/287 (88.50%), Query Frame = 0
BLAST of Carg19356 vs. TAIR10
Match: AT4G35970.1 (ascorbate peroxidase 5) HSP 1 Score: 378.6 bits (971), Expect = 4.1e-105 Identity = 189/281 (67.26%), Postives = 222/281 (79.00%), Query Frame = 0
BLAST of Carg19356 vs. TAIR10
Match: AT3G09640.1 (ascorbate peroxidase 2) HSP 1 Score: 325.5 bits (833), Expect = 4.1e-89 Identity = 156/241 (64.73%), Postives = 184/241 (76.35%), Query Frame = 0
BLAST of Carg19356 vs. TAIR10
Match: AT1G07890.3 (ascorbate peroxidase 1) HSP 1 Score: 314.7 bits (805), Expect = 7.3e-86 Identity = 152/242 (62.81%), Postives = 184/242 (76.03%), Query Frame = 0
BLAST of Carg19356 vs. TAIR10
Match: AT4G08390.1 (stromal ascorbate peroxidase) HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63 Identity = 126/256 (49.22%), Postives = 164/256 (64.06%), Query Frame = 0
BLAST of Carg19356 vs. Swiss-Prot
Match: sp|Q42564|APX3_ARATH (L-ascorbate peroxidase 3 OS=Arabidopsis thaliana OX=3702 GN=APX3 PE=1 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 2.1e-135 Identity = 236/287 (82.23%), Postives = 254/287 (88.50%), Query Frame = 0
BLAST of Carg19356 vs. Swiss-Prot
Match: sp|Q6ZJJ1|APX4_ORYSJ (Probable L-ascorbate peroxidase 4, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=APX4 PE=2 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 3.8e-132 Identity = 230/291 (79.04%), Postives = 258/291 (88.66%), Query Frame = 0
BLAST of Carg19356 vs. Swiss-Prot
Match: sp|Q0JEQ2|APX3_ORYSJ (Probable L-ascorbate peroxidase 3, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=APX3 PE=2 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-120 Identity = 214/287 (74.56%), Postives = 243/287 (84.67%), Query Frame = 0
BLAST of Carg19356 vs. Swiss-Prot
Match: sp|Q01MI9|APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica OX=39946 GN=APX3 PE=2 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 3.3e-120 Identity = 213/287 (74.22%), Postives = 243/287 (84.67%), Query Frame = 0
BLAST of Carg19356 vs. Swiss-Prot
Match: sp|Q7XZP5|APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=APX5 PE=1 SV=2) HSP 1 Score: 378.6 bits (971), Expect = 7.4e-104 Identity = 189/281 (67.26%), Postives = 222/281 (79.00%), Query Frame = 0
BLAST of Carg19356 vs. TrEMBL
Match: tr|A0A1S3BJ93|A0A1S3BJ93_CUCME (L-ascorbate peroxidase 3, peroxisomal OS=Cucumis melo OX=3656 GN=LOC103490293 PE=3 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 3.8e-153 Identity = 270/286 (94.41%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Carg19356 vs. TrEMBL
Match: tr|Q948P1|Q948P1_9ROSI (Peroxisomal ascorbate peroxidase OS=Cucurbita hybrid cultivar OX=170850 GN=pAPX PE=2 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 5.1e-150 Identity = 267/286 (93.36%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of Carg19356 vs. TrEMBL
Match: tr|Q39780|Q39780_GOSHI (Ascorbate peroxidase OS=Gossypium hirsutum OX=3635 GN=gAPX PE=2 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 1.3e-145 Identity = 258/288 (89.58%), Postives = 273/288 (94.79%), Query Frame = 0
BLAST of Carg19356 vs. TrEMBL
Match: tr|A0A1U8JSX7|A0A1U8JSX7_GOSHI (L-ascorbate peroxidase 3, peroxisomal OS=Gossypium hirsutum OX=3635 GN=LOC107908653 PE=3 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 1.7e-145 Identity = 258/288 (89.58%), Postives = 272/288 (94.44%), Query Frame = 0
BLAST of Carg19356 vs. TrEMBL
Match: tr|A0A0B0MPD9|A0A0B0MPD9_GOSAR (L-ascorbate peroxidase 3, peroxisomal-like protein OS=Gossypium arboreum OX=29729 GN=F383_00644 PE=3 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 2.9e-145 Identity = 257/288 (89.24%), Postives = 273/288 (94.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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