Carg19349 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19349
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase BOI
Location	Cucurbita_argyrosperma_scaffold_096 : 43483 .. 44497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCACGCTCAGTTCTACCCTGAAAACCTTGCCTTTCCCTTCGCCGGAAACTCCACGGATGCCGTCTCTCCGTTTTGCTTCCAGAAACCGCCGACTGAGTTCTTCTCTGGTGGTGGTGGTGGCGGTAATGGTGGTGGTGGTGACGGTGGCTCTGTTTTTAGCTTTGCGAAGAATCCCAACAGAACGGCCGTTGCAGCGGCGGGGTTTTCTCAATGTGTGAGTGCCCATGTTGAGAAACAGAGACAAGAGATCGATTATTACATCAGAGTTCAGGTTCGAATCAAACCCATTACAGAATTTATGAGAATGCTCTGTTTTTTTTCTATCACGATTTTGATTTGCCTCTGGTTTTTTTTTTTTTTTTTTTTGTTTTTAGAATGAGAGCTTAAGAATGGCGTTGAGAGAACAAGGAAAGCAACAAATTACATCATTAATGAAGAAAATCGAAATGAAAGCAGCAATTTTATTAAGGCAAAAAGAAGAAGAAATTGCTAAAGCTGCTAAGAAAACAATGGAACTTGAAATTTTCCTGAGAAAATTAGAAACAGAGAATCAACTATGGCAGAAAATCGCTCAAGAAAACGAAGCAATGGCCATGTCTCTCAACAACACATTAGATCAAATGAGAGAAAAAGCTTCTAATTCCATGGAAGACGCAGAATCCTGCTGCGACATGAACTCCGCCGCCGCCGTGGAGGAAGAAATCCGACCAGGGTGCTCTGTTTTGGAACAGGGAAGAATGAAGAACAGGATGATTTGCAGAGAGTGTAATCATCGGAATTCGACAGTGATTCTGTTGCCTTGTCGGCATCTGTGTTGCTGTAAGGATTGTGAAACGGTCGTGGATTCATGTCCCGTTTGCAGAACGGGGAAGAAAGCGAGCATAGAGGCGATGATTTTCTGAGAAAAACCCAGAAATTTTCTTTCCCGGGAAAAGGCGAGAAAATCAGATAGGAAAATGTCAATAGAAGAAGGCACTGTTCTTCAACGTTTCTTCTTTTTTTTTTTT

mRNA sequence

ATGGCGGTTCACGCTCAGTTCTACCCTGAAAACCTTGCCTTTCCCTTCGCCGGAAACTCCACGGATGCCGTCTCTCCGTTTTGCTTCCAGAAACCGCCGACTGAGTTCTTCTCTGGTGGTGGTGGTGGCGGTAATGGTGGTGGTGGTGACGGTGGCTCTGTTTTTAGCTTTGCGAAGAATCCCAACAGAACGGCCGTTGCAGCGGCGGGGTTTTCTCAATGTGTGAGTGCCCATGTTGAGAAACAGAGACAAGAGATCGATTATTACATCAGAGTTCAGAATGAGAGCTTAAGAATGGCGTTGAGAGAACAAGGAAAGCAACAAATTACATCATTAATGAAGAAAATCGAAATGAAAGCAGCAATTTTATTAAGGCAAAAAGAAGAAGAAATTGCTAAAGCTGCTAAGAAAACAATGGAACTTGAAATTTTCCTGAGAAAATTAGAAACAGAGAATCAACTATGGCAGAAAATCGCTCAAGAAAACGAAGCAATGGCCATGTCTCTCAACAACACATTAGATCAAATGAGAGAAAAAGCTTCTAATTCCATGGAAGACGCAGAATCCTGCTGCGACATGAACTCCGCCGCCGCCGTGGAGGAAGAAATCCGACCAGGGTGCTCTGTTTTGGAACAGGGAAGAATGAAGAACAGGATGATTTGCAGAGAGTGTAATCATCGGAATTCGACAGTGATTCTGTTGCCTTGTCGGCATCTGTGTTGCTGTAAGGATTGTGAAACGGTCGTGGATTCATGTCCCGTTTGCAGAACGGGGAAGAAAGCGAGCATAGAGGCGATGATTTTCTGAGAAAAACCCAGAAATTTTCTTTCCCGGGAAAAGGCGAGAAAATCAGATAGGAAAATGTCAATAGAAGAAGGCACTGTTCTTCAACGTTTCTTCTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCGGTTCACGCTCAGTTCTACCCTGAAAACCTTGCCTTTCCCTTCGCCGGAAACTCCACGGATGCCGTCTCTCCGTTTTGCTTCCAGAAACCGCCGACTGAGTTCTTCTCTGGTGGTGGTGGTGGCGGTAATGGTGGTGGTGGTGACGGTGGCTCTGTTTTTAGCTTTGCGAAGAATCCCAACAGAACGGCCGTTGCAGCGGCGGGGTTTTCTCAATGTGTGAGTGCCCATGTTGAGAAACAGAGACAAGAGATCGATTATTACATCAGAGTTCAGAATGAGAGCTTAAGAATGGCGTTGAGAGAACAAGGAAAGCAACAAATTACATCATTAATGAAGAAAATCGAAATGAAAGCAGCAATTTTATTAAGGCAAAAAGAAGAAGAAATTGCTAAAGCTGCTAAGAAAACAATGGAACTTGAAATTTTCCTGAGAAAATTAGAAACAGAGAATCAACTATGGCAGAAAATCGCTCAAGAAAACGAAGCAATGGCCATGTCTCTCAACAACACATTAGATCAAATGAGAGAAAAAGCTTCTAATTCCATGGAAGACGCAGAATCCTGCTGCGACATGAACTCCGCCGCCGCCGTGGAGGAAGAAATCCGACCAGGGTGCTCTGTTTTGGAACAGGGAAGAATGAAGAACAGGATGATTTGCAGAGAGTGTAATCATCGGAATTCGACAGTGATTCTGTTGCCTTGTCGGCATCTGTGTTGCTGTAAGGATTGTGAAACGGTCGTGGATTCATGTCCCGTTTGCAGAACGGGGAAGAAAGCGAGCATAGAGGCGATGATTTTCTGA

Protein sequence

MAVHAQFYPENLAFPFAGNSTDAVSPFCFQKPPTEFFSGGGGGGNGGGGDGGSVFSFAKNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF

Homology

[Close]

BLAST of Carg19349 vs. NCBI nr
Match: XP_022952451.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita moschata])

HSP 1 Score: 467.6 bits (1202), Expect = 2.8e-128
Identity = 245/268 (91.42%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNSTDAVSPFCFQKPXXXXXXXXXXXXXXXXXXXXXVFSFAKN 60
           MAVHAQFYPENLAFPFAGNSTDAVSP CFQKP                     VFSFAKN
Sbjct: 1   MAVHAQFYPENLAFPFAGNSTDAVSPLCFQKP-------PTEFFSGGGGDGGSVFSFAKN 60

Query: 61  PNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKA 120
           PNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM+A
Sbjct: 61  PNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMEA 120

Query: 121 AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKA 180
           AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKA
Sbjct: 121 AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKA 180

Query: 181 SNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLC 240
           SNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLC
Sbjct: 181 SNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLC 240

Query: 241 CCKDCETVVDSCPVCRTGKKASIEAMIF 269
           CCKDCETVVDSCPVCRTGKKASIEAMIF
Sbjct: 241 CCKDCETVVDSCPVCRTGKKASIEAMIF 261

[Close]

BLAST of Carg19349 vs. NCBI nr
Match: XP_022969504.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 265/270 (98.15%), Postives = 267/270 (98.89%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNSTDAVSPFCFQKP--XXXXXXXXXXXXXXXXXXXXXVFSFA 60
           MAVHAQFYPENLAFPFAGNSTDAVS FCFQKP  XXXXXXXXXXXXXXXXXXXXXVFSFA
Sbjct: 1   MAVHAQFYPENLAFPFAGNSTDAVSQFCFQKPPTXXXXXXXXXXXXXXXXXXXXXVFSFA 60

Query: 61  KNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM 120
           KNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM
Sbjct: 61  KNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM 120

Query: 121 KAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMRE 180
           KAAILLRQKEEEIAKA+KKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMRE
Sbjct: 121 KAAILLRQKEEEIAKASKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMRE 180

Query: 181 KASNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRH 240
           KASNSM+DAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRH
Sbjct: 181 KASNSMDDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRH 240

Query: 241 LCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
           LCCCKDCETVVDSCPVCRTGKKASIEAMIF
Sbjct: 241 LCCCKDCETVVDSCPVCRTGKKASIEAMIF 270

[Close]

BLAST of Carg19349 vs. NCBI nr
Match: XP_011658597.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Cucumis sativus] >KGN43254.1 hypothetical protein Csa_7G012920 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 7.2e-100
Identity = 204/278 (73.38%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNS-TDAVSPFCFQKP--XXXXXXXXXXXXXXXXXXXXXVFSF 60
           MAVHAQFYPENL FPFA NS TD+ S F FQKP                       V +F
Sbjct: 1   MAVHAQFYPENLVFPFAANSPTDSHSQFSFQKPPLISQPEFFSVSSGGGDGADVASVLNF 60

Query: 61  AKNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIE 120
            KNP+RTA A AGFSQCVSAHVEKQRQEID+YIR+QNESLR+ALREQGKQQI +LMKKIE
Sbjct: 61  TKNPHRTAAATAGFSQCVSAHVEKQRQEIDHYIRLQNESLRIALREQGKQQIVALMKKIE 120

Query: 121 MKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMR 180
           +K AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQ+IAQENEAMAMSLNNTLDQMR
Sbjct: 121 LKTAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQRIAQENEAMAMSLNNTLDQMR 180

Query: 181 EKASNSMEDAESCCDMNSAAAVEEEI------RPGCSVLEQGRMKN-RMICRECNHRNST 240
           EK +NS +DAESCCDMNSA   +E+I         CSV EQG+MKN +MICR CN RNS+
Sbjct: 181 EKVTNSFDDAESCCDMNSA---DEQIPARNRGTECCSVSEQGQMKNKKMICRSCNFRNSS 240

Query: 241 VILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
           +I LPCRHLCCCKDCETV+DSCPVC+TGKKASIEA+IF
Sbjct: 241 MIFLPCRHLCCCKDCETVLDSCPVCQTGKKASIEALIF 275

[Close]

BLAST of Carg19349 vs. NCBI nr
Match: XP_008447956.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 8.3e-88
Identity = 183/276 (66.30%), Postives = 202/276 (73.19%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNS-TDAVSPFCFQK-PXXXXXXXXXXXXXXXXXXXXXVFSFA 60
           MAVHAQFYPENL FPF GNS  D++S FCFQK P                     V +F 
Sbjct: 1   MAVHAQFYPENLVFPFPGNSPPDSLSQFCFQKPPLISPTEFFSVSSVGDGGDVGSVLNFT 60

Query: 61  KNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM 120
           KNP+RTA A AGFSQCVSAHVEKQRQEID+YIR+QNESLR+ALREQGKQQI +LMKKIE+
Sbjct: 61  KNPHRTAAATAGFSQCVSAHVEKQRQEIDHYIRLQNESLRIALREQGKQQIVALMKKIEL 120

Query: 121 KAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMRE 180
           K AI                     FLRKLETENQLWQ+IAQENEAMAMSLNNTLDQMRE
Sbjct: 121 KTAIXXXXXXXXXXXXXXXXXXXXXFLRKLETENQLWQRIAQENEAMAMSLNNTLDQMRE 180

Query: 181 KASNSMEDAESCCDMNSAAAVEE-----EIRPGCSVLEQGRMKN-RMICRECNHRNSTVI 240
           + SNS +DAESCCDMNSA A E+          CSV EQG+MKN +MICR CN RNS++I
Sbjct: 181 RVSNSFDDAESCCDMNSATADEQIPARNRGTECCSVSEQGKMKNKKMICRSCNCRNSSMI 240

Query: 241 LLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
            LPCRHLCCCKDCETV+DSCPVC TGKKASIEA+IF
Sbjct: 241 FLPCRHLCCCKDCETVLDSCPVCNTGKKASIEALIF 276

[Close]

BLAST of Carg19349 vs. NCBI nr
Match: XP_023529767.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 8.5e-85
Identity = 178/271 (65.68%), Postives = 200/271 (73.80%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNSTDAVSPFCFQKPXXXXXXXXXXXXXXXXXXXXXVFSFAKN 60
           MAVHAQ Y EN  FPFAG  TD V  FCFQKP                     VFSF+KN
Sbjct: 1   MAVHAQLYSENHGFPFAGGLTDVVGQFCFQKP--TQMTPTELFNGDGGDGGGSVFSFSKN 60

Query: 61  PNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKA 120
           P+R    AA FSQC+SAHVEKQRQEID+ IR+QNE LR ALREQGKQQI++LMKKIE K 
Sbjct: 61  PHRMGGGAAAFSQCMSAHVEKQRQEIDHCIRLQNERLRTALREQGKQQISTLMKKIEAKT 120

Query: 121 AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREK- 180
            +LLRQKEEEI KA+KKTMELEIFLRKLETENQ+W++IA+ENEAMAMSL N LDQMRE  
Sbjct: 121 EVLLRQKEEEIVKASKKTMELEIFLRKLETENQIWKRIAEENEAMAMSLTNKLDQMRENI 180

Query: 181 ASNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNR---MICRECNHRNSTVILLPC 240
           A+NS +DAESCC  +            CSV E G  +++   MICR CN RNSTVILLPC
Sbjct: 181 ATNSSDDAESCCADDDETPARNR---ACSVSEHGTKQSKTMMMICRGCNFRNSTVILLPC 240

Query: 241 RHLCCCKDCETVVDSCPVCRTGKKASIEAMI 268
           RHLCCCK CE+V+DSCPVCRTGKKASIEA+I
Sbjct: 241 RHLCCCKHCESVLDSCPVCRTGKKASIEALI 266

[Close]

BLAST of Carg19349 vs. TAIR10
Match: AT4G35070.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-21
Identity = 69/199 (34.67%), Postives = 95/199 (47.74%), Query Frame = 0


Query: 75  VSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIAKA 134
           ++A +EKQ+QEID +I++QNE LR  L+E                               
Sbjct: 74  LAAQMEKQKQEIDQFIKIQNERLRYVLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 133

Query: 135 AKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCCDMN 194
                           ENQ WQ++A+ENEA+  +LN TL+Q+RE+A+       +C D  
Sbjct: 134 XXXXXXXXXXXXXXXXENQTWQRMARENEAIVQTLNTTLEQVRERAA-------TCYDAG 193

Query: 195 SAAAVEEEIRPG----CSVLEQGRMKNRMICRECNHRNST-VILLPCRHLCCCKDCETVV 254
            A   +E    G     + L   +MK    C  C     T V+ LPCRHLCCC DCE  +
Sbjct: 194 EAEVEDEGSFCGGEGDGNSLPAKKMKMSSCCCNCGSNGVTRVLFLPCRHLCCCMDCEEGL 253

Query: 255 DSCPVCRTGKKASIEAMIF 269
             CP+C T KK+ IEA+IF
Sbjct: 254 LLCPICNTPKKSRIEALIF 265

[Close]

BLAST of Carg19349 vs. TAIR10
Match: AT3G12920.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 73  QCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIA 132
           Q +S++V++   +ID  I    E +RM + E+ K Q   +++ +E      LR K++EI 
Sbjct: 128 QDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEIN 187

Query: 133 KAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMR--------EKASNSM 192
              K  + LE  ++ L  ENQ+W+ +AQ NEA   +L + L Q+         E+     
Sbjct: 188 HIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVA 247

Query: 193 EDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRM---ICRECNHRNSTVILLPCRHLCC 252
           +DA+SCC  N     EEE        +  +   R+   +CR C    ++V+LLPCRH+C 
Sbjct: 248 DDAQSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCL 307

Query: 253 CKDCETVVDSCPVCRTGKKASI 264
           C  C + +++CP+C++ K AS+
Sbjct: 308 CSVCGSSLNTCPICKSPKTASL 329

[Close]

BLAST of Carg19349 vs. TAIR10
Match: AT1G45976.1 (S-ribonuclease binding protein 1)

HSP 1 Score: 95.5 bits (236), Expect = 5.3e-20
Identity = 60/193 (31.09%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 75  VSAHVEKQRQEIDYYIRVQNESLRMALRE---QGKQQITSLMKKIEMKAAILLRQKEEEI 134
           +   +++Q  +ID ++++Q + LR A+ +   +G+Q+  SLM   E K    LR+K+EE+
Sbjct: 139 IDRELQRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLM---EEKVVQKLREKDEEL 198

Query: 135 AKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCC 194
            +  +K  ELE+ + +L  E + WQ+ A+ NE M  +LN  LD+ + +  +S+E      
Sbjct: 199 ERINRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAALNYNLDRAQGRPRDSIEGCGDSE 258

Query: 195 DMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDCETVVDS 254
             ++A+                  K  M+CR C  R   ++LLPC H+C CK+CE  + S
Sbjct: 259 VDDTASCFNGRDN------SNNNTKTMMMCRFCGVREMCMLLLPCNHMCLCKECERKLSS 318

Query: 255 CPVCRTGKKASIE 265
           CP+C++ K   +E
Sbjct: 319 CPLCQSSKFLGME 322

[Close]

BLAST of Carg19349 vs. TAIR10
Match: AT1G32740.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-19
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 76  SAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIAKAA 135
           +AH+ +Q +E+D ++  Q E LR  L E+ K    +L+  +E      LR+KE EI +A 
Sbjct: 118 AAHINRQSEELDEFLHAQAEELRRTLAEKRKMHYKALLGAVEESLVRKLREKEVEIERAT 177

Query: 136 KKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCCDMNS 195
           ++  EL     +L  E Q+WQ+ A+ +E  A SL + L Q   +       A  C     
Sbjct: 178 RRHNELVARDSQLRAEVQVWQERAKAHEDAAASLQSQLQQAVNQC------AGGCVSAQD 237

Query: 196 AAAVEE--------EIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDCET 255
           + A EE         +    SV        R  C+ C  R +TV++LPCRHL  C  C+ 
Sbjct: 238 SRAAEEGLLCTTISGVDDAESVYVDPERVKRPNCKACREREATVVVLPCRHLSICPGCDR 297

Query: 256 VVDSCPVCRTGKKASIEAM 267
              +CP+C T + +S+EA+
Sbjct: 298 TALACPLCLTLRNSSVEAI 310

[Close]

BLAST of Carg19349 vs. TAIR10
Match: AT1G79110.1 (zinc ion binding)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-16
Identity = 61/208 (29.33%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 75  VSAHVEKQRQEIDYYIRV---QNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEI 134
           +S+H+ +Q+ EID ++ +   Q E ++  + E+ K+Q  ++M+ IE      LR KEEE 
Sbjct: 145 ISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEER 204

Query: 135 AKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCC 194
            +  K    LE  ++ L  ENQ+W+ +AQ NEA A  L   L+ +  +  +    A    
Sbjct: 205 ERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEK 264

Query: 195 DMN----------------SAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLP 254
           +MN                                          CR C    S V+LLP
Sbjct: 265 NMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCGEEESCVLLLP 324

Query: 255 CRHLCCCKDCETVVDSCPVCRTGKKASI 264
           CRHLC C  C + V +CP+C + K AS+
Sbjct: 325 CRHLCLCGVCGSSVHTCPICTSPKNASV 352

[Close]

BLAST of Carg19349 vs. Swiss-Prot
Match: sp|Q9LDD1|BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 73  QCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIA 132
           Q +S++V++   +ID  I    E +RM + E+ K Q   +++ +E      LR K++EI 
Sbjct: 128 QDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEIN 187

Query: 133 KAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMR--------EKASNSM 192
              K  + LE  ++ L  ENQ+W+ +AQ NEA   +L + L Q+         E+     
Sbjct: 188 HIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVA 247

Query: 193 EDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRM---ICRECNHRNSTVILLPCRHLCC 252
           +DA+SCC  N     EEE        +  +   R+   +CR C    ++V+LLPCRH+C 
Sbjct: 248 DDAQSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCL 307

Query: 253 CKDCETVVDSCPVCRTGKKASI 264
           C  C + +++CP+C++ K AS+
Sbjct: 308 CSVCGSSLNTCPICKSPKTASL 329

[Close]

BLAST of Carg19349 vs. Swiss-Prot
Match: sp|Q9FHE4|BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.3e-15
Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 0


Query: 77  AHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIAKAAK 136
           + +++Q  EID ++  Q E+LR+ L  + + Q   L   ++      L+ K+EEI +  K
Sbjct: 104 SQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGK 163

Query: 137 KTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQM----------REKASNSMED 196
               L+  ++ L  ENQ+W+ +AQ NEA A +L + L+Q+          R       +D
Sbjct: 164 LNWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFRRPLVEEADD 223

Query: 197 AESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDC- 256
           AES C       V   +  G              C+ C    ++V++LPCRHLC C  C 
Sbjct: 224 AESSCGSCDGGDVTAVVNGG--------------CKRCGELTASVLVLPCRHLCLCTVCG 283

Query: 257 -ETVVDSCPVCRTGKKASI 264
              ++ +CPVC     AS+
Sbjct: 284 SSALLRTCPVCDMVMTASV 288

[Close]

BLAST of Carg19349 vs. Swiss-Prot
Match: sp|F4IDI6|BRG2_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.3e-15
Identity = 61/208 (29.33%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 75  VSAHVEKQRQEIDYYIRV---QNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEI 134
           +S+H+ +Q+ EID ++ +   Q E ++  + E+ K+Q  ++M+ IE      LR KEEE 
Sbjct: 145 ISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEER 204

Query: 135 AKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREKASNSMEDAESCC 194
            +  K    LE  ++ L  ENQ+W+ +AQ NEA A  L   L+ +  +  +    A    
Sbjct: 205 ERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEK 264

Query: 195 DMN----------------SAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLP 254
           +MN                                          CR C    S V+LLP
Sbjct: 265 NMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCGEEESCVLLLP 324

Query: 255 CRHLCCCKDCETVVDSCPVCRTGKKASI 264
           CRHLC C  C + V +CP+C + K AS+
Sbjct: 325 CRHLCLCGVCGSSVHTCPICTSPKNASV 352

[Close]

BLAST of Carg19349 vs. Swiss-Prot
Match: sp|O81851|BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-14
Identity = 63/200 (31.50%), Postives = 100/200 (50.00%), Query Frame = 0


Query: 73  QCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIA 132
           + VS    +Q+ EID ++  Q E LR+ +  + + Q   L   ++   A  L++K++EI 
Sbjct: 110 ELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIV 169

Query: 133 KAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMREK------ASNSME- 192
           +       L+  ++ L  ENQ+W+ IAQ NEA A +L   LDQ+  +      AS  +E 
Sbjct: 170 RIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVED 229

Query: 193 DAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDC 252
           DAES C         E +    + +  G       C+ C  R ++V++LPCRHLC C  C
Sbjct: 230 DAESSCGSCCGDGGGEAV----TAVGGG-------CKRCGEREASVLVLPCRHLCLCTVC 289

Query: 253 --ETVVDSCPVCRTGKKASI 264
               ++ +CPVC     AS+
Sbjct: 290 GGSALLRTCPVCDMVMNASV 298

[Close]

BLAST of Carg19349 vs. Swiss-Prot
Match: sp|P98170|XIAP_HUMAN (E3 ubiquitin-protein ligase XIAP OS=Homo sapiens OX=9606 GN=XIAP PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.0e-06
Identity = 25/76 (32.89%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 182 NSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICRECNHRNSTVILLPCRHLCC 241
           +SM+D  S   +    + EE++R         R++   +C+ C  RN  ++ +PC HL  
Sbjct: 420 DSMQDESSQTSLQKEISTEEQLR---------RLQEEKLCKICMDRNIAIVFVPCGHLVT 479

Query: 242 CKDCETVVDSCPVCRT 258
           CK C   VD CP+C T
Sbjct: 480 CKQCAEAVDKCPMCYT 486

[Close]

BLAST of Carg19349 vs. TrEMBL
Match: tr|A0A0A0K2J7|A0A0A0K2J7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012920 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 4.8e-100
Identity = 204/278 (73.38%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNS-TDAVSPFCFQKP--XXXXXXXXXXXXXXXXXXXXXVFSF 60
           MAVHAQFYPENL FPFA NS TD+ S F FQKP                       V +F
Sbjct: 1   MAVHAQFYPENLVFPFAANSPTDSHSQFSFQKPPLISQPEFFSVSSGGGDGADVASVLNF 60

Query: 61  AKNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIE 120
            KNP+RTA A AGFSQCVSAHVEKQRQEID+YIR+QNESLR+ALREQGKQQI +LMKKIE
Sbjct: 61  TKNPHRTAAATAGFSQCVSAHVEKQRQEIDHYIRLQNESLRIALREQGKQQIVALMKKIE 120

Query: 121 MKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMR 180
           +K AILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQ+IAQENEAMAMSLNNTLDQMR
Sbjct: 121 LKTAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQRIAQENEAMAMSLNNTLDQMR 180

Query: 181 EKASNSMEDAESCCDMNSAAAVEEEI------RPGCSVLEQGRMKN-RMICRECNHRNST 240
           EK +NS +DAESCCDMNSA   +E+I         CSV EQG+MKN +MICR CN RNS+
Sbjct: 181 EKVTNSFDDAESCCDMNSA---DEQIPARNRGTECCSVSEQGQMKNKKMICRSCNFRNSS 240

Query: 241 VILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
           +I LPCRHLCCCKDCETV+DSCPVC+TGKKASIEA+IF
Sbjct: 241 MIFLPCRHLCCCKDCETVLDSCPVCQTGKKASIEALIF 275

[Close]

BLAST of Carg19349 vs. TrEMBL
Match: tr|A0A1S3BIM3|A0A1S3BIM3_CUCME (probable BOI-related E3 ubiquitin-protein ligase 2 OS=Cucumis melo OX=3656 GN=LOC103490285 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 5.5e-88
Identity = 183/276 (66.30%), Postives = 202/276 (73.19%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNS-TDAVSPFCFQK-PXXXXXXXXXXXXXXXXXXXXXVFSFA 60
           MAVHAQFYPENL FPF GNS  D++S FCFQK P                     V +F 
Sbjct: 1   MAVHAQFYPENLVFPFPGNSPPDSLSQFCFQKPPLISPTEFFSVSSVGDGGDVGSVLNFT 60

Query: 61  KNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQITSLMKKIEM 120
           KNP+RTA A AGFSQCVSAHVEKQRQEID+YIR+QNESLR+ALREQGKQQI +LMKKIE+
Sbjct: 61  KNPHRTAAATAGFSQCVSAHVEKQRQEIDHYIRLQNESLRIALREQGKQQIVALMKKIEL 120

Query: 121 KAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSLNNTLDQMRE 180
           K AI                     FLRKLETENQLWQ+IAQENEAMAMSLNNTLDQMRE
Sbjct: 121 KTAIXXXXXXXXXXXXXXXXXXXXXFLRKLETENQLWQRIAQENEAMAMSLNNTLDQMRE 180

Query: 181 KASNSMEDAESCCDMNSAAAVEE-----EIRPGCSVLEQGRMKN-RMICRECNHRNSTVI 240
           + SNS +DAESCCDMNSA A E+          CSV EQG+MKN +MICR CN RNS++I
Sbjct: 181 RVSNSFDDAESCCDMNSATADEQIPARNRGTECCSVSEQGKMKNKKMICRSCNCRNSSMI 240

Query: 241 LLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
            LPCRHLCCCKDCETV+DSCPVC TGKKASIEA+IF
Sbjct: 241 FLPCRHLCCCKDCETVLDSCPVCNTGKKASIEALIF 276

[Close]

BLAST of Carg19349 vs. TrEMBL
Match: tr|W9S847|W9S847_9ROSA (Putative E3 ubiquitin-protein ligase MGRN1 OS=Morus notabilis OX=981085 GN=L484_008380 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54
Identity = 149/284 (52.46%), Postives = 180/284 (63.38%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNSTDAV------------SPFCFQKPXXXXXXXXXXXXXXXX 60
           MA+ AQ Y ENL FP  G+    V            + F F   XXXXXXXXXXXXXX  
Sbjct: 1   MAIQAQLYQENLGFPLCGSQDWTVDIGNNGCGAFNFNQFSFGSXXXXXXXXXXXXXXXFI 60

Query: 61  XXXXXVFSFAKNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQ 120
                +             +  +SQ ++   EKQRQE+D YI++ NESLR+ L+EQ KQ 
Sbjct: 61  QELQNLQQKNDKFLHDNTLSMAYSQRIAEQAEKQRQEVDQYIKLHNESLRLMLQEQRKQL 120

Query: 121 ITSLMKKIEMKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMS 180
           +T+L+KKIE K   LLR K+EEIA AAK+TMELE  LRKLE+ENQ WQ++AQE EAM +S
Sbjct: 121 MTTLIKKIEPKLLALLRDKDEEIALAAKRTMELEDLLRKLESENQAWQRVAQEKEAMVVS 180

Query: 181 LNNTLDQMREKA----SNSMEDAESCCDMNSAAAVEEEIRPGCSVLEQGRMKNRMICREC 240
           LNN+L+Q RE A    SN  EDAESCCD       EEE R        G  ++ M+C+ C
Sbjct: 181 LNNSLEQAREMASFCPSNGAEDAESCCDFGMENRGEEETR--------GGKQSVMVCKAC 240

Query: 241 NHRNSTVILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMIF 269
           N RNS V+LLPCRHLC CK CE  +DSCPVCRT KKASIEA+IF
Sbjct: 241 NSRNSCVLLLPCRHLCSCKACEAFLDSCPVCRTPKKASIEALIF 276

[Close]

BLAST of Carg19349 vs. TrEMBL
Match: tr|A0A1R3JD67|A0A1R3JD67_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17340 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54
Identity = 157/287 (54.70%), Postives = 190/287 (66.20%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGNST-------DAVSPFCF----QKPXXXXXXXXXXXXXXXXX 60
           MA+ AQ Y EN+ FP  G+          A + FCF    QKP  XXXXXXXXXXXXXXX
Sbjct: 1   MAIQAQLYSENIGFPLCGSQDWIDNGCGGAFNQFCFGGLQQKPSLXXXXXXXXXXXXXXX 60

Query: 61  XXXXVFSFAKNPNRTAVAAAGFSQCVSAHVEKQRQEIDYYIRVQNESLRMALREQGKQQI 120
           XXXX                         VEKQR +ID +IR QNE L + L+EQ KQ +
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXL-VEKQRHDIDQFIRSQNERLGLLLQEQRKQLV 120

Query: 121 TSLMKKIEMKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQLWQKIAQENEAMAMSL 180
             L+KKIE KA++LLRQK+EEIAKA  KTMELEI LRKLE E+Q WQ++AQENEAM MSL
Sbjct: 121 AVLVKKIESKASVLLRQKDEEIAKATNKTMELEILLRKLEFESQAWQRVAQENEAMVMSL 180

Query: 181 NNTLDQMREKAS----NSMEDAESCCDMNSAAAVE-EEIRPGCS--VLEQGR--MKNRMI 240
           NNTL+Q+RE+AS    N ++DAESCC++N    +E EE R G +  V EQG+      M+
Sbjct: 181 NNTLEQLREQASCCFNNGVDDAESCCEVNGEEGIETEENRGGFTGHVFEQGQETTVKSMV 240

Query: 241 CRECNHRNSTVILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMI 268
           C+ CN R+S V+ LPCRHLC CKDCE  +DSCP+CRT KKA IEA+I
Sbjct: 241 CKCCNSRSSCVLFLPCRHLCSCKDCEAFLDSCPICRTPKKAIIEAII 286

[Close]

BLAST of Carg19349 vs. TrEMBL
Match: tr|A0A2P5A7I4|A0A2P5A7I4_PARAD (E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360850 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 155/298 (52.01%), Postives = 190/298 (63.76%), Query Frame = 0


Query: 1   MAVHAQFYPENLAFPFAGN----STDA------VSPFCFQKPXXXXXXXXXXXXXXXXXX 60
           MA+ AQ Y ENL FP  G+    +TDA       +  CF       XXXXXXXXXXXXXX
Sbjct: 1   MAIQAQLYQENLGFPLFGSQDWMTTDASGCGLGYNHLCFSAQQKNHXXXXXXXXXXXXXX 60

Query: 61  XXXV------------FSFAKNPNRTAVAAA-----GFSQCVSAHVEKQRQEIDYYIRVQ 120
           XXX             F  +   N TA++AA      FS      VEKQRQEID Y+++Q
Sbjct: 61  XXXXXXXDNIWLDNTSFPSSTTKNDTAISAALPSSMAFSHSAVDQVEKQRQEIDQYVKLQ 120

Query: 121 NESLRMALREQGKQQITSLMKKIEMKAAILLRQKEEEIAKAAKKTMELEIFLRKLETENQ 180
           NE LR+ L+EQ KQQ  +L+KK+E K   LLR K+EEIA+A K+TMELE  LRKLE ENQ
Sbjct: 121 NERLRLMLQEQRKQQFLTLVKKVEPKVLGLLRYKDEEIAQATKRTMELEDMLRKLEAENQ 180

Query: 181 LWQKIAQENEAMAMSLNNTLDQMREKA----SNSMEDAESCCDMNSAAAVEEEIRPGCSV 240
           +WQ++AQENEAM +SLNN+L+Q RE+A    +N  EDAESCCD+      EE    G   
Sbjct: 181 IWQRVAQENEAMVVSLNNSLEQARERALCCVNNGAEDAESCCDVGME---EEGENRGVGQ 240

Query: 241 LEQGRMKNRMICRECNHRNSTVILLPCRHLCCCKDCETVVDSCPVCRTGKKASIEAMI 268
            +    K  M+C+ CN R+S+V+ LPCRHLC CK CE  +DSCPVCRT KKASIEA+I
Sbjct: 241 NDNIGEKTTMVCKGCNSRSSSVLFLPCRHLCSCKACEAFLDSCPVCRTIKKASIEALI 295

The following BLAST results are available for this feature:

BLAST of Carg19349 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952451.1	2.8e-128	91.42	probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita moschata]	[more]
XP_022969504.1	1.4e-127	98.15	probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita maxima]	[more]
XP_011658597.1	7.2e-100	73.38	PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Cucumis sativus] ...	[more]
XP_008447956.1	8.3e-88	66.30	PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Cucumis melo]	[more]
XP_023529767.1	8.5e-85	65.68	probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19349 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35070.1	3.6e-21	34.67	SBP (S-ribonuclease binding protein) family protein	[more]
AT3G12920.1	1.1e-20	31.68	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G45976.1	5.3e-20	31.09	S-ribonuclease binding protein 1	[more]
AT1G32740.1	5.8e-19	31.66	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G79110.1	4.6e-16	29.33	zinc ion binding	[more]

BLAST of Carg19349 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LDD1\|BRG3_ARATH	1.9e-19	31.68	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q9FHE4\|BRG1_ARATH	8.3e-15	29.15	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
sp\|F4IDI6\|BRG2_ARATH	8.3e-15	29.33	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
sp\|O81851\|BOI_ARATH	5.4e-14	31.50	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
sp\|P98170\|XIAP_HUMAN	7.0e-06	32.89	E3 ubiquitin-protein ligase XIAP OS=Homo sapiens OX=9606 GN=XIAP PE=1 SV=2	[more]

BLAST of Carg19349 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2J7\|A0A0A0K2J7_CUCSA	4.8e-100	73.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012920 PE=4 SV=1	[more]
tr\|A0A1S3BIM3\|A0A1S3BIM3_CUCME	5.5e-88	66.30	probable BOI-related E3 ubiquitin-protein ligase 2 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|W9S847\|W9S847_9ROSA	1.0e-54	52.46	Putative E3 ubiquitin-protein ligase MGRN1 OS=Morus notabilis OX=981085 GN=L484_...	[more]
tr\|A0A1R3JD67\|A0A1R3JD67_9ROSI	2.3e-54	54.70	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17340 PE=4 SV=1	[more]
tr\|A0A2P5A7I4\|A0A2P5A7I4_PARAD	1.1e-53	52.01	E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR017066	E3ligase_BOI_like
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19349-RA	Carg19349-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..186
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 219..257 e-value: 2.2E-8 score: 33.8
None	No IPR available	PANTHER	PTHR42647:SF6	SUBFAMILY NOT NAMED	coord: 68..267
None	No IPR available	PANTHER	PTHR42647	FAMILY NOT NAMED	coord: 68..267
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 215..258
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 208..266 e-value: 8.1E-10 score: 40.0
IPR017066	E3 ubiquitin-protein ligase BOI-like	PIRSF	PIRSF036836	SBP1_RNase_bind	coord: 53..268 e-value: 9.5E-54 score: 181.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 221..256 score: 9.258

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19349	Cla015825	Watermelon (97103) v1	carwmB0305
Carg19349	Cla020276	Watermelon (97103) v1	carwmB0306
Carg19349	Csa7G012920	Cucumber (Chinese Long) v2	carcuB0342
Carg19349	Csa2G270790	Cucumber (Chinese Long) v2	carcuB0341
Carg19349	MELO3C013352	Melon (DHL92) v3.5.1	carmeB0321
Carg19349	MELO3C020819	Melon (DHL92) v3.5.1	carmeB0319
Carg19349	ClCG02G011940	Watermelon (Charleston Gray)	carwcgB0309
Carg19349	ClCG02G004080	Watermelon (Charleston Gray)	carwcgB0308
Carg19349	CSPI02G13590	Wild cucumber (PI 183967)	carcpiB0347
Carg19349	CSPI07G01000	Wild cucumber (PI 183967)	carcpiB0348
Carg19349	Cucsa.234240	Cucumber (Gy14) v1	carcgyB0369
Carg19349	Cucsa.370510	Cucumber (Gy14) v1	carcgyB0371
Carg19349	CmaCh05G003220	Cucurbita maxima (Rimu)	carcmaB0443
Carg19349	CmaCh20G007490	Cucurbita maxima (Rimu)	carcmaB0441
Carg19349	CmaCh19G007410	Cucurbita maxima (Rimu)	carcmaB0440
Carg19349	CmaCh11G013790	Cucurbita maxima (Rimu)	carcmaB0439
Carg19349	CmoCh19G007500	Cucurbita moschata (Rifu)	carcmoB0433
Carg19349	CmoCh11G017420	Cucurbita moschata (Rifu)	carcmoB0432
Carg19349	CmoCh20G007440	Cucurbita moschata (Rifu)	carcmoB0435
Carg19349	Lsi10G004970	Bottle gourd (USVL1VR-Ls)	carlsiB289
Carg19349	Lsi11G012020	Bottle gourd (USVL1VR-Ls)	carlsiB290
Carg19349	Cp4.1LG04g04840	Cucurbita pepo (Zucchini)	carcpeB0439
Carg19349	Cp4.1LG16g03160	Cucurbita pepo (Zucchini)	carcpeB0437
Carg19349	Cp4.1LG15g05870	Cucurbita pepo (Zucchini)	carcpeB0436
Carg19349	CsGy2G013470	Cucumber (Gy14) v2	carcgybB0325
Carg19349	CsGy7G000820	Cucumber (Gy14) v2	carcgybB0326
Carg19349	MELO3C013352.2	Melon (DHL92) v3.6.1	carmedB0330
Carg19349	MELO3C020819.2	Melon (DHL92) v3.6.1	carmedB0328
Carg19349	CsaV3_7G001040	Cucumber (Chinese Long) v3	carcucB0347
Carg19349	CsaV3_2G016110	Cucumber (Chinese Long) v3	carcucB0346
Carg19349	Cla97C02G030900	Watermelon (97103) v2	carwmbB0324
Carg19349	Cla97C02G037570	Watermelon (97103) v2	carwmbB0325
Carg19349	Bhi05G001470	Wax gourd	carwgoB0397
Carg19349	Bhi10G001455	Wax gourd	carwgoB0400

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19349	Carg05708	Silver-seed gourd	carcarB343

The following block(s) are covering this gene:

None