Carg19343 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19343
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	26S proteasome non-ATPase regulatory subunit 3 like
Location	Cucurbita_argyrosperma_scaffold_096 : 11107 .. 14151 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGCTTACGAGACAACCTGAAGAAACCCTTGTGCCATCTCCCGTCGCTTTATACAGCAAAATCTCCGGCTTTCTCTGAATTCGAGGTTTAATTTGTTTCAGCTATTGATCTTGTTTCTTTCTTCTGTTTCTCCATTCGAAATCTTGTCGATTCAGTCGTGTAGTTTTGTGGATTTCATACAGAATTTGCGAAGATGACGCAAGACGCTGAGATGAAGGAGCTTCCTCCTCCCATTTCTTCTTCTGCTGCTCCAACTTCTCCTTCAACGTTACAACGTATTAGAGCTTTATCTGCATTTTTTCATGTTTTGTTGAATTCTTGGTGGCCTTGATTTTGAAATTTGTTAACGATTTCTTTCGATCAGATTTGAAAGAGATTGTGTCGCTTCTTGAAACCGGTGCGTACGCACGGGAAGTCCGGCGAATCGTTCGAGCTATTCGTCTGACTATGGCGTTGAGGCAGAAATTGAAGGCGTCTGTTCTTTCTCCATTTCTGAATTTTGCTCTCCCGCCAGGATCCGATGTGCACACAAGGTTATCATCATTTATTCCGAAGGTAATTCGAAATTTAATGGAAACATTGTTGTTTGTGTGCATGATGCAATTCCCTGTTCTAAAGATCGTGAAACGCTGTAATAAGCTTTGTTTAACAATTGGTTAGGAGGATGACTACGAAATGGATATTGACTCGGAAACAAAGGCATTAACTCAGGCACCTGTAAAACATCCCTTACCTGAGATAGAGATTTTCTGCTATTTGCTTTTGCTAGTATTTCTGATTGATCAGAAGAAATATGGCGAGGTGATGTATTCCTCTTATCCATCAGGGGTTTTCCTATTTTGCCTGAACTGTGGTCTTGACTCCTGAAAACTTGTTGGATATTTTCAGGCTAAGGCTTGTGCTTCAGCTAGCATTGCCCGATTGAAGAACTTGAATAGAAGAACGGTTGATGTGCTATCATCTAGGCTTTACTTTTATTACTCGCTTAGCTACGAACTCACTGGTGATCTTGCTGAAATAAGAGGGTAGGTTTATAACTTAAGATTTTATTAGAGTTATGTTAGTTAATTTCATACATTTCTATGATTCTGGTGGTTTGATTCCAGAGTAGAGTGTATTGATACTCATTTCATAACATGGAAAACTTTGATTGACAGTAACCTCCTGGCCCTGCATCGCATTGCAACGTTACGCCATGATGAATTGGGTCAGGTAATTTTCTTCATTTTTCTATCAGTCCATACCATATTATGGTGCCTTATATAGTGGTAACAATGTGATTTAGGAAACCCTCCTCAACCTACTACTTCGAAATTACCTCCATTACAATCTTTACGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAACCAGCAGGCAAGTTTTAGGACGATTGTCTTTTTCTTTCAATTATTATTATTATTATTATTATTTTATCTTTTGCTAAAACAAGTATCTGTGGATTTAAGAAAGTTATGCTGCAATATTATGCAGCATTCTTCAGTATAAATGCTTGTAACATAAGTTACTTCGCTCGTTAAATAGTTCTAGCGATGAGATTTGAAGTTGTCGATTTTTACATGCCTACATGCTTTTGAATTTCAATGATGATTGCAGTTTGTAATGTCTAGGCATAAGAAGAATTCAGGCATTTTTTTTAATTTAATAATTTTTAGTGATGTTTTGTATGTATAAATTTCCTAGAATTTAATATTTTTGTCAAGTATCTTATGAATTTTGGTTTCAAGCACAGTTCTGTAGGTACCTATTTTACCTAGGCAAGATCAGGACCATTCAGCTGGAATATACAGATGCGAAGGAGTCTCTTCTACAAGCTGCCCGAAAAGCACCTATCGCAGCGCTTGGTTTTCGAGTACAATGCAACAAATGGGCAATCATTGTTCGCTTATTGTTAGGAGAAATCCCTGAGAGGACTGTTTTTATGCAGAAAGGCATGGAGACAGCTCTGAGGCCATACTTTGAACTTACAAATGTAAGTTTAAGTTCAAGAAATATTCGACCATTTTATGTCTTCGGAAATGGTTAGGTTGGTGATTGCGCAGTAGCCCCAAACCTCCCACCGCTCCCTCCTCCATCGTTCCTCTCTTCCTCTCTTTTCTCTGTGAAGAAAAAATAAAAATACTTGAATTGGCCTCTTCATATGAATTATAGTGAACTCCCTTGTTATTTGTCAATAGTCTATTCTGCTCTTTTATTAGCAATGCTTTTTTCTTTCAGGCTGTGAGAATTGGCGACTTGGAGCTTTTCAGAACTGTTGCTGATAAGTTCTCTAGTTCTTTCAGCTCAGATCGAACCAACAATTTAATCGTGAGGCTGCGACATAATGTAATCAGAACTGGGCTGCGCAACATTAGCATATCATATTCGCGCATTTCTCTGGCTGATATTGCTAAAAAGCTGAGACTGGACTCTGAAAATCCCATTGCTGATGCCGAGAGTATCGTCTCTAAGGCAATCCGAGATGGAGCAATTGATGCCACGGTTGATCACGCGAAGGGATGGATGGTATCCAAGGAGACTGGAGACATCTACTCTACCAATGAGCCTCAAATTGCCTTCAACTCAAGGATTGCATTCTGCCTGAATATGCACAATGAGGCAGTTCGTGCTCTCAGGTTCCCACCAAACTCCCACAAAGAAAAGGAAAGTGCTGAGAAAAGGAGAGAAAGACAGCAGCAGGAGCAAGAACTTGCTAAGCATATAGCCGAAGAAGACGATGACGACTTTTAACTGATTCAGTGCGAGACTCAGCTCAATTCGAGACGTGGGAGCCAATCAGATGTACAACTTCATCCAGGTATGCTGGTCAGAAAGTTTTTGATGCATTGATTCAATCATCTTTTTCCCTTTTTTTTACCATGAATCTATCGTGTTCGTAACGCCACACCGGTTGTTTCATTCATAGAACATACTTGAGATGCCCATCTTATTTGGTGAAACTCTTCTAAATTGTAACATGAGCTTTTGGATTTTGTTCATGCCATTTTGTAGTTGATATTATGG

mRNA sequence

TCTTGCTTACGAGACAACCTGAAGAAACCCTTGTGCCATCTCCCGTCGCTTTATACAGCAAAATCTCCGGCTTTCTCTGAATTCGAGTTTTGTGGATTTCATACAGAATTTGCGAAGATGACGCAAGACGCTGAGATGAAGGAGCTTCCTCCTCCCATTTCTTCTTCTGCTGCTCCAACTTCTCCTTCAACGTTACAACATTTGAAAGAGATTGTGTCGCTTCTTGAAACCGGTGCGTACGCACGGGAAGTCCGGCGAATCGTTCGAGCTATTCGTCTGACTATGGCGTTGAGGCAGAAATTGAAGGCGTCTGTTCTTTCTCCATTTCTGAATTTTGCTCTCCCGCCAGGATCCGATGTGCACACAAGGTTATCATCATTTATTCCGAAGGAGGATGACTACGAAATGGATATTGACTCGGAAACAAAGGCATTAACTCAGGCACCTGTAAAACATCCCTTACCTGAGATAGAGATTTTCTGCTATTTGCTTTTGCTAGTATTTCTGATTGATCAGAAGAAATATGGCGAGGCTAAGGCTTGTGCTTCAGCTAGCATTGCCCGATTGAAGAACTTGAATAGAAGAACGGTTGATGTGCTATCATCTAGGCTTTACTTTTATTACTCGCTTAGCTACGAACTCACTGGTGATCTTGCTGAAATAAGAGGTAACCTCCTGGCCCTGCATCGCATTGCAACGTTACGCCATGATGAATTGGGTCAGGAAACCCTCCTCAACCTACTACTTCGAAATTACCTCCATTACAATCTTTACGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAACCAGCAGTTCTGTAGGTACCTATTTTACCTAGGCAAGATCAGGACCATTCAGCTGGAATATACAGATGCGAAGGAGTCTCTTCTACAAGCTGCCCGAAAAGCACCTATCGCAGCGCTTGGTTTTCGAGTACAATGCAACAAATGGGCAATCATTGTTCGCTTATTGTTAGGAGAAATCCCTGAGAGGACTGTTTTTATGCAGAAAGGCATGGAGACAGCTCTGAGGCCATACTTTGAACTTACAAATGCTGTGAGAATTGGCGACTTGGAGCTTTTCAGAACTGTTGCTGATAAGTTCTCTAGTTCTTTCAGCTCAGATCGAACCAACAATTTAATCGTGAGGCTGCGACATAATGTAATCAGAACTGGGCTGCGCAACATTAGCATATCATATTCGCGCATTTCTCTGGCTGATATTGCTAAAAAGCTGAGACTGGACTCTGAAAATCCCATTGCTGATGCCGAGAGTATCGTCTCTAAGGCAATCCGAGATGGAGCAATTGATGCCACGGTTGATCACGCGAAGGGATGGATGGTATCCAAGGAGACTGGAGACATCTACTCTACCAATGAGCCTCAAATTGCCTTCAACTCAAGGATTGCATTCTGCCTGAATATGCACAATGAGGCAGTTCGTGCTCTCAGGTTCCCACCAAACTCCCACAAAGAAAAGGAAAGTGCTGAGAAAAGGAGAGAAAGACAGCAGCAGGAGCAAGAACTTGCTAAGCATATAGCCGAAGAAGACGATGACGACTTTTAACTGATTCAGTGCGAGACTCAGCTCAATTCGAGACGTGGGAGCCAATCAGATGTACAACTTCATCCAGGTATGCTGGTCAGAAAGTTTTTGATGCATTGATTCAATCATCTTTTTCCCTTTTTTTTACCATGAATCTATCGTGTTCGTAACGCCACACCGGTTGTTTCATTCATAGAACATACTTGAGATGCCCATCTTATTTGGTGAAACTCTTCTAAATTGTAACATGAGCTTTTGGATTTTGTTCATGCCATTTTGTAGTTGATATTATGG

Coding sequence (CDS)

TCTTGCTTACGAGACAACCTGAAGAAACCCTTGTGCCATCTCCCGTCGCTTTATACAGCAAAATCTCCGGCTTTCTCTGAATTCGAGTTTTGTGGATTTCATACAGAATTTGCGAAGATGACGCAAGACGCTGAGATGAAGGAGCTTCCTCCTCCCATTTCTTCTTCTGCTGCTCCAACTTCTCCTTCAACGTTACAACATTTGAAAGAGATTGTGTCGCTTCTTGAAACCGGTGCGTACGCACGGGAAGTCCGGCGAATCGTTCGAGCTATTCGTCTGACTATGGCGTTGAGGCAGAAATTGAAGGCGTCTGTTCTTTCTCCATTTCTGAATTTTGCTCTCCCGCCAGGATCCGATGTGCACACAAGGTTATCATCATTTATTCCGAAGGAGGATGACTACGAAATGGATATTGACTCGGAAACAAAGGCATTAACTCAGGCACCTGTAAAACATCCCTTACCTGAGATAGAGATTTTCTGCTATTTGCTTTTGCTAGTATTTCTGATTGATCAGAAGAAATATGGCGAGGCTAAGGCTTGTGCTTCAGCTAGCATTGCCCGATTGAAGAACTTGAATAGAAGAACGGTTGATGTGCTATCATCTAGGCTTTACTTTTATTACTCGCTTAGCTACGAACTCACTGGTGATCTTGCTGAAATAAGAGGTAACCTCCTGGCCCTGCATCGCATTGCAACGTTACGCCATGATGAATTGGGTCAGGAAACCCTCCTCAACCTACTACTTCGAAATTACCTCCATTACAATCTTTACGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAACCAGCAGTTCTGTAGGTACCTATTTTACCTAGGCAAGATCAGGACCATTCAGCTGGAATATACAGATGCGAAGGAGTCTCTTCTACAAGCTGCCCGAAAAGCACCTATCGCAGCGCTTGGTTTTCGAGTACAATGCAACAAATGGGCAATCATTGTTCGCTTATTGTTAGGAGAAATCCCTGAGAGGACTGTTTTTATGCAGAAAGGCATGGAGACAGCTCTGAGGCCATACTTTGAACTTACAAATGCTGTGAGAATTGGCGACTTGGAGCTTTTCAGAACTGTTGCTGATAAGTTCTCTAGTTCTTTCAGCTCAGATCGAACCAACAATTTAATCGTGAGGCTGCGACATAATGTAATCAGAACTGGGCTGCGCAACATTAGCATATCATATTCGCGCATTTCTCTGGCTGATATTGCTAAAAAGCTGAGACTGGACTCTGAAAATCCCATTGCTGATGCCGAGAGTATCGTCTCTAAGGCAATCCGAGATGGAGCAATTGATGCCACGGTTGATCACGCGAAGGGATGGATGGTATCCAAGGAGACTGGAGACATCTACTCTACCAATGAGCCTCAAATTGCCTTCAACTCAAGGATTGCATTCTGCCTGAATATGCACAATGAGGCAGTTCGTGCTCTCAGGTTCCCACCAAACTCCCACAAAGAAAAGGAAAGTGCTGAGAAAAGGAGAGAAAGACAGCAGCAGGAGCAAGAACTTGCTAAGCATATAGCCGAAGAAGACGATGACGACTTTTAA

Protein sequence

SCLRDNLKKPLCHLPSLYTAKSPAFSEFEFCGFHTEFAKMTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQKLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEIFCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF

Homology

[Close]

BLAST of Carg19343 vs. NCBI nr
Match: XP_022953127.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita moschata] >XP_022953128.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita moschata])

HSP 1 Score: 887.9 bits (2293), Expect = 1.7e-254
Identity = 458/459 (99.78%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ
Sbjct: 1   MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI
Sbjct: 61  KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA
Sbjct: 121 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSS+FSSDRTNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSTFSSDRTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET
Sbjct: 361 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 459

[Close]

BLAST of Carg19343 vs. NCBI nr
Match: XP_023554693.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. pepo] >XP_023554694.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 885.6 bits (2287), Expect = 8.5e-254
Identity = 456/459 (99.35%), Postives = 458/459 (99.78%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIV LLETGAYAREVRRIVRAIRLTMALRQ
Sbjct: 1   MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVPLLETGAYAREVRRIVRAIRLTMALRQ 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMD+DSETKALTQAPVKHPLPEIEI
Sbjct: 61  KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDVDSETKALTQAPVKHPLPEIEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA
Sbjct: 121 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSS+FSSDRTNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSTFSSDRTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET
Sbjct: 361 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 459

[Close]

BLAST of Carg19343 vs. NCBI nr
Match: XP_022969475.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima] >XP_022969476.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima] >XP_022969477.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima])

HSP 1 Score: 879.8 bits (2272), Expect = 4.7e-252
Identity = 454/459 (98.91%), Postives = 458/459 (99.78%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQDAEMKELPPPISSSAA TSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ
Sbjct: 1   MTQDAEMKELPPPISSSAALTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMD+DSETKALTQAPVKHPLPEIEI
Sbjct: 61  KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDVDSETKALTQAPVKHPLPEIEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA
Sbjct: 121 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYL+YNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLYYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET
Sbjct: 361 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 459

[Close]

BLAST of Carg19343 vs. NCBI nr
Match: XP_022136128.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Momordica charantia] >XP_022136129.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Momordica charantia] >XP_022136130.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Momordica charantia])

HSP 1 Score: 830.9 bits (2145), Expect = 2.5e-237
Identity = 430/460 (93.48%), Postives = 444/460 (96.52%), Query Frame = 0


Query: 40  MTQDAEMKELPPPI-SSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR 99
           MTQDAEMKELP PI SSSAA TSPS LQHLKEIVSL+ETGAYAREVRRIVRAIRLTMALR
Sbjct: 1   MTQDAEMKELPAPISSSSAASTSPSALQHLKEIVSLIETGAYAREVRRIVRAIRLTMALR 60

Query: 100 QKLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIE 159
           +KLKASVLS FLN AL PGSDVHTRLSSF+PKEDDYEMD+DS     TQAP KHPLPEIE
Sbjct: 61  RKLKASVLSSFLNSALQPGSDVHTRLSSFLPKEDDYEMDVDS----ATQAPAKHPLPEIE 120

Query: 160 IFCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDL 219
           IFCYL++L+FLIDQKKY EAKACA+ASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDL
Sbjct: 121 IFCYLIVLIFLIDQKKYDEAKACATASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDL 180

Query: 220 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 279
           AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ
Sbjct: 181 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 240

Query: 280 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 339
           FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 300

Query: 340 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRT 399
           TVFMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRT
Sbjct: 301 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRT 360

Query: 400 GLRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKE 459
            LRNISISYSRISLAD+AKKLRLDSENP+ADAESIVSKAIRDGAIDATVDHA GWMVSKE
Sbjct: 361 ALRNISISYSRISLADVAKKLRLDSENPVADAESIVSKAIRDGAIDATVDHANGWMVSKE 420

Query: 460 TGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           TGDIYSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 TGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 456

[Close]

BLAST of Carg19343 vs. NCBI nr
Match: XP_008447941.1 (PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo] >XP_008447942.1 PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo] >XP_016900506.1 PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo])

HSP 1 Score: 824.7 bits (2129), Expect = 1.8e-235
Identity = 430/458 (93.89%), Postives = 438/458 (95.63%), Query Frame = 0


Query: 41  TQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQK 100
           TQDAEMKELP PISS     SPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR+K
Sbjct: 3   TQDAEMKELPAPISS-----SPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRRK 62

Query: 101 LKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEIF 160
           LKAS LS FLNFALPPGSDVHTRLSSFIPKE+DYEMD+DS     TQ P KHPLPEIEIF
Sbjct: 63  LKASDLSSFLNFALPPGSDVHTRLSSFIPKEEDYEMDVDS----ATQPPAKHPLPEIEIF 122

Query: 161 CYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLAE 220
           CYL+LL+FLIDQKKYGEAKACASASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDLAE
Sbjct: 123 CYLILLIFLIDQKKYGEAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAE 182

Query: 221 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 280
           IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC
Sbjct: 183 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 242

Query: 281 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV 340
           RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAAL FRVQCNKWAIIVRLLLGEIPERTV
Sbjct: 243 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTV 302

Query: 341 FMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTGL 400
           FMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRTGL
Sbjct: 303 FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 362

Query: 401 RNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKETG 460
           RNISISYSRISLADIAKKLRLDSENPIADAESIVSKA RDGAIDATVDH   WMVSKETG
Sbjct: 363 RNISISYSRISLADIAKKLRLDSENPIADAESIVSKATRDGAIDATVDHGNKWMVSKETG 422

Query: 461 DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 423 DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 451

[Close]

BLAST of Carg19343 vs. TAIR10
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 727.6 bits (1877), Expect = 5.4e-210
Identity = 367/459 (79.96%), Postives = 413/459 (89.98%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQD EMK+   P S S   +S ST+Q+LKEI +L++TG+Y +EVRRI RA+RLT+ LRQ
Sbjct: 1   MTQDVEMKDNNTP-SQSIISSSTSTMQNLKEIAALIDTGSYTKEVRRIARAVRLTIGLRQ 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KL  SVLS FL+FAL PGS+ H+RLSSF+PK D+++M++D+ + A   AP KH   E+EI
Sbjct: 61  KLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           +CY ++L+FLIDQKKY EAKAC+SASIARLKN+NRRT+DV++SRLYFYYSLSYE TGDLA
Sbjct: 121 YCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRG LLALH  ATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFR+QCNKWAI+VRLLLGEIPER+
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILVRLLLGEIPERS 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           +F QKGME ALRPYFELTNAVRIGDLELFRTV +KF  +F+ DRT+NLIVRLRHNVIRTG
Sbjct: 301 IFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISL D+AKKLRL+SENP+ADAESIV+KAIRDGAIDAT+DH  G MVSKET
Sbjct: 361 LRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+HK
Sbjct: 421 GDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHK 458

[Close]

BLAST of Carg19343 vs. TAIR10
Match: AT1G75990.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 704.9 bits (1818), Expect = 3.7e-203
Identity = 356/460 (77.39%), Postives = 410/460 (89.13%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISS-SAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR 99
           MTQD EMK+   P  S  +APT  STLQ+LKEI +L++TG+Y +EVRRI RA+RLT+ LR
Sbjct: 1   MTQDVEMKDNQTPTQSVVSAPT--STLQNLKEIAALIDTGSYTKEVRRIARAVRLTVGLR 60

Query: 100 QKLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIE 159
           +KL  SV+S FL+FAL PGS+ HTRLSSF+PK D+++M++D+   + +QAP KH   E+E
Sbjct: 61  RKLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDT-ASSNSQAPPKHLPAELE 120

Query: 160 IFCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDL 219
           I+CY ++L+FLIDQKKY EAK C++ASIARLK++NRRTVDV++S+LYFYYSLSYELT DL
Sbjct: 121 IYCYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDL 180

Query: 220 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 279
           AEIR  LLALH  ATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ
Sbjct: 181 AEIRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 240

Query: 280 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 339
           FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP+A+LGFR+QCNKWAIIVRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLGFRIQCNKWAIIVRLLLGEIPER 300

Query: 340 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRT 399
           ++F QKGME  LRPYFELTNAVRIGDLELF  + +KF+ +F+ DRT+NLIVRLRHNVIRT
Sbjct: 301 SIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRT 360

Query: 400 GLRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKE 459
           GLRNISISYSRISL D+A+KLRL+S NP+ADAESIV+KAIRDGAIDAT+DH  G MVSKE
Sbjct: 361 GLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKE 420

Query: 460 TGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H+
Sbjct: 421 TGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHR 457

[Close]

BLAST of Carg19343 vs. Swiss-Prot
Match: sp|P93768|PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum OX=4097 GN=21D7 PE=2 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 1.5e-222
Identity = 396/459 (86.27%), Postives = 425/459 (92.59%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQD EMKE   P S+S + T+PS   HLKEI SL+ETGAYAREVRRI RA+RLTMALR+
Sbjct: 1   MTQDVEMKEQAAPPSNSLSSTAPSIFHHLKEIASLIETGAYAREVRRISRAVRLTMALRK 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKAS LS FLN+ L PGS+VH+RLSSF+PKED+ +M++D+ T    QAP+K+PLPE+EI
Sbjct: 61  KLKASSLSAFLNYVLVPGSEVHSRLSSFLPKEDEQDMEVDTATSG-AQAPIKNPLPELEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           +CYLL+L+FLIDQKKY EAKAC+SASIARLK +NRRTVDVL+SRLYFYYSL YELTGDLA
Sbjct: 121 YCYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRG LLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGYLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
            RYLFYLGKIRTIQLEYTDAKESLLQAARKAP AALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 SRYLFYLGKIRTIQLEYTDAKESLLQAARKAPQAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGME ALRPYFELTNAVRIGDLELFR VA+KFSS+FSSD TNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMEKALRPYFELTNAVRIGDLELFRKVAEKFSSTFSSDGTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISL D+AKKLRLDS NP+ADAESIVSKAIRDGAIDAT+DHA GWMVSKET
Sbjct: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 458

[Close]

BLAST of Carg19343 vs. Swiss-Prot
Match: sp|Q06364|PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039 GN=21D7 PE=1 SV=2)

HSP 1 Score: 766.9 bits (1979), Expect = 1.4e-220
Identity = 387/460 (84.13%), Postives = 428/460 (93.04%), Query Frame = 0


Query: 40  MTQDAEMKELPPPI-SSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR 99
           MTQD EMKE+P P  S+S    +PSTLQHLKEI SL+E+GAYAREVRRI+RA+RLT+ALR
Sbjct: 1   MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 100 QKLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIE 159
           +KL ASV++ FLNF+L PGS+VH RL+S++PKED+++M++D+   A T    KH LPE+E
Sbjct: 61  KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTL-AKHSLPELE 120

Query: 160 IFCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDL 219
           I+CYLL+L+FLIDQKKY EAKAC+SASIAR+KNLNRRTV+VL+SRLYFYYSLSYELTGDL
Sbjct: 121 IYCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDL 180

Query: 220 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 279
           AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ
Sbjct: 181 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 240

Query: 280 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 339
           FCRYLFYLGKIRTIQLEYTDAKES LQAARKAP+AALGFRVQCNKWA+IVRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESXLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPER 300

Query: 340 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRT 399
           TVFMQKGME ALRPYF LTNAVRIGDLELFR VADKF+S+F++DRT+NLIVRLRHNVIRT
Sbjct: 301 TVFMQKGMEKALRPYFXLTNAVRIGDLELFRXVADKFASTFTADRTHNLIVRLRHNVIRT 360

Query: 400 GLRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKE 459
           GLRNISISYSRISL D+A+KLRLDS NP+ADAESIVSKAIRDGAIDAT+DHA GWMVSKE
Sbjct: 361 GLRNISISYSRISLVDVARKLRLDSPNPVADAESIVSKAIRDGAIDATIDHANGWMVSKE 420

Query: 460 TGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFP NSHK
Sbjct: 421 TGDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSHK 459

[Close]

BLAST of Carg19343 vs. Swiss-Prot
Match: sp|Q9LNU4|PSD3A_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN3A PE=1 SV=3)

HSP 1 Score: 727.6 bits (1877), Expect = 9.7e-209
Identity = 367/459 (79.96%), Postives = 413/459 (89.98%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQD EMK+   P S S   +S ST+Q+LKEI +L++TG+Y +EVRRI RA+RLT+ LRQ
Sbjct: 1   MTQDVEMKDNNTP-SQSIISSSTSTMQNLKEIAALIDTGSYTKEVRRIARAVRLTIGLRQ 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KL  SVLS FL+FAL PGS+ H+RLSSF+PK D+++M++D+ + A   AP KH   E+EI
Sbjct: 61  KLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           +CY ++L+FLIDQKKY EAKAC+SASIARLKN+NRRT+DV++SRLYFYYSLSYE TGDLA
Sbjct: 121 YCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRG LLALH  ATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFR+QCNKWAI+VRLLLGEIPER+
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILVRLLLGEIPERS 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           +F QKGME ALRPYFELTNAVRIGDLELFRTV +KF  +F+ DRT+NLIVRLRHNVIRTG
Sbjct: 301 IFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISL D+AKKLRL+SENP+ADAESIV+KAIRDGAIDAT+DH  G MVSKET
Sbjct: 361 LRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+HK
Sbjct: 421 GDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHK 458

[Close]

BLAST of Carg19343 vs. Swiss-Prot
Match: sp|Q9LQR8|PSD3B_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN3B PE=1 SV=2)

HSP 1 Score: 704.9 bits (1818), Expect = 6.7e-202
Identity = 356/460 (77.39%), Postives = 410/460 (89.13%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISS-SAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR 99
           MTQD EMK+   P  S  +APT  STLQ+LKEI +L++TG+Y +EVRRI RA+RLT+ LR
Sbjct: 1   MTQDVEMKDNQTPTQSVVSAPT--STLQNLKEIAALIDTGSYTKEVRRIARAVRLTVGLR 60

Query: 100 QKLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIE 159
           +KL  SV+S FL+FAL PGS+ HTRLSSF+PK D+++M++D+   + +QAP KH   E+E
Sbjct: 61  RKLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDT-ASSNSQAPPKHLPAELE 120

Query: 160 IFCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDL 219
           I+CY ++L+FLIDQKKY EAK C++ASIARLK++NRRTVDV++S+LYFYYSLSYELT DL
Sbjct: 121 IYCYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDL 180

Query: 220 AEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 279
           AEIR  LLALH  ATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ
Sbjct: 181 AEIRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 240

Query: 280 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 339
           FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP+A+LGFR+QCNKWAIIVRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLGFRIQCNKWAIIVRLLLGEIPER 300

Query: 340 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRT 399
           ++F QKGME  LRPYFELTNAVRIGDLELF  + +KF+ +F+ DRT+NLIVRLRHNVIRT
Sbjct: 301 SIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRT 360

Query: 400 GLRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKE 459
           GLRNISISYSRISL D+A+KLRL+S NP+ADAESIV+KAIRDGAIDAT+DH  G MVSKE
Sbjct: 361 GLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKE 420

Query: 460 TGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H+
Sbjct: 421 TGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHR 457

[Close]

BLAST of Carg19343 vs. Swiss-Prot
Match: sp|Q2KJ46|PSMD3_BOVIN (26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus OX=9913 GN=PSMD3 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.5e-100
Identity = 205/437 (46.91%), Postives = 291/437 (66.59%), Query Frame = 0


Query: 64  TLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQKLKASVLSPFLNFALPPGSDVHTR 123
           TL+ +KE V  LE     +E R ++RA+R+  +  ++L   VL   ++      +     
Sbjct: 71  TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 130

Query: 124 LSSFIPKEDDYEMDID--SETKALTQAPVKHPLPEIEIFCYLLLLVFLIDQKKYGEAKAC 183
           L  F+ +  D E D+     T     AP+   LPE+E +  LL+++FL++ K+Y EA+  
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASAPL---LPEVEAYLQLLMVIFLMNSKRYKEAQKI 190

Query: 184 ASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQ 243
           +   + ++   NRR +D+++++ Y+Y++  YE    L  +R  L A  R ATLRHD  GQ
Sbjct: 191 SDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDTDGQ 250

Query: 244 ETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKE 303
            TLLNLLLRNYLHY+LYDQAEKL SK+   E  +N ++ RYL+Y G+I+ IQLEY++A+ 
Sbjct: 251 ATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARR 310

Query: 304 SLLQAARKAP-IAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAV 363
           ++  A RKAP   A+GF+   +K  I+V LLLGEIP+R  F Q  ++ +L PYF LT AV
Sbjct: 311 TMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAV 370

Query: 364 RIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLR 423
           R G+L  F  V D+F   F +D T  LI+RLRHNVI+TG+R IS+SYSRISLADIA+KL+
Sbjct: 371 RTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQ 430

Query: 424 LDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKETGDIYSTNEPQIAFNSRIAFCL 483
           LDS     DAE IV+KAIRDG I+A+++H KG++ SKE  DIYST EPQ+AF+ RI+FCL
Sbjct: 431 LDSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCL 490

Query: 484 NMHNEAVRALRFPPNSH 498
           ++HN +V+A+RFPP S+
Sbjct: 491 DIHNMSVKAMRFPPKSY 501

[Close]

BLAST of Carg19343 vs. TrEMBL
Match: tr|A0A1S3BJ75|A0A1S3BJ75_CUCME (probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 GN=LOC103490276 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 1.2e-235
Identity = 430/458 (93.89%), Postives = 438/458 (95.63%), Query Frame = 0


Query: 41  TQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQK 100
           TQDAEMKELP PISS     SPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALR+K
Sbjct: 3   TQDAEMKELPAPISS-----SPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRRK 62

Query: 101 LKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEIF 160
           LKAS LS FLNFALPPGSDVHTRLSSFIPKE+DYEMD+DS     TQ P KHPLPEIEIF
Sbjct: 63  LKASDLSSFLNFALPPGSDVHTRLSSFIPKEEDYEMDVDS----ATQPPAKHPLPEIEIF 122

Query: 161 CYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLAE 220
           CYL+LL+FLIDQKKYGEAKACASASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDLAE
Sbjct: 123 CYLILLIFLIDQKKYGEAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAE 182

Query: 221 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 280
           IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC
Sbjct: 183 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 242

Query: 281 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV 340
           RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAAL FRVQCNKWAIIVRLLLGEIPERTV
Sbjct: 243 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTV 302

Query: 341 FMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTGL 400
           FMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRTGL
Sbjct: 303 FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 362

Query: 401 RNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKETG 460
           RNISISYSRISLADIAKKLRLDSENPIADAESIVSKA RDGAIDATVDH   WMVSKETG
Sbjct: 363 RNISISYSRISLADIAKKLRLDSENPIADAESIVSKATRDGAIDATVDHGNKWMVSKETG 422

Query: 461 DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 423 DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 451

[Close]

BLAST of Carg19343 vs. TrEMBL
Match: tr|A0A1S4E2Q6|A0A1S4E2Q6_CUCME (probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 GN=LOC103499019 PE=4 SV=1)

HSP 1 Score: 813.5 bits (2100), Expect = 2.7e-232
Identity = 418/459 (91.07%), Postives = 438/459 (95.42%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQDAEMKELP P+SSS++  SPS LQ+LKEIVSL+ETGAYAREVRRIVRAIRLTMALR+
Sbjct: 1   MTQDAEMKELPAPLSSSSSSASPSALQNLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVLS FLN  LP GS+VHTRLSSF+PKEDD EMD+D+     TQAP KHPLPEIEI
Sbjct: 61  KLKASVLSQFLNLVLPTGSEVHTRLSSFLPKEDDCEMDVDT----ATQAPAKHPLPEIEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           + YL++L+FLID KKY +AKACASASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDLA
Sbjct: 121 YSYLIVLIFLIDHKKYDDAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISL D+AKKLRLDS NP+ADAESIVSKAIRDGAIDATVDHA GWMVSKET
Sbjct: 361 LRNISISYSRISLVDVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg19343 vs. TrEMBL
Match: tr|A0A0A0K1C2|A0A0A0K1C2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014490 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 5.1e-231
Identity = 424/458 (92.58%), Postives = 434/458 (94.76%), Query Frame = 0


Query: 41  TQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQK 100
           TQDAEMKELP PISS     SPSTLQ+LKEIVSLLETGAYAREVRRIVRAIRLTMALR+K
Sbjct: 3   TQDAEMKELPAPISS-----SPSTLQNLKEIVSLLETGAYAREVRRIVRAIRLTMALRRK 62

Query: 101 LKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEIF 160
           LKASVLS FLNFALPPGSDVHTRLSSFIPKE+D EMD+D      TQ P KH LPEIEIF
Sbjct: 63  LKASVLSSFLNFALPPGSDVHTRLSSFIPKEEDCEMDVD----LATQTPSKHLLPEIEIF 122

Query: 161 CYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLAE 220
           CYL+LL+FLIDQKKYGEAKACASASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDLAE
Sbjct: 123 CYLILLIFLIDQKKYGEAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAE 182

Query: 221 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 280
           IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC
Sbjct: 183 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 242

Query: 281 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV 340
           RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAAL FRVQCNKWAIIVRLLLGEIPERTV
Sbjct: 243 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTV 302

Query: 341 FMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTGL 400
           FMQKGMETALRPYFELTNAVRIGDLELFRTVA+KFSS+FSSDRTNNLIVRLRHNVIRTGL
Sbjct: 303 FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 362

Query: 401 RNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKETG 460
           RNISISYSRISLAD+AKKLRLDSEN IADAESIVSKA RDGAIDATVDH   WMVSKETG
Sbjct: 363 RNISISYSRISLADVAKKLRLDSENLIADAESIVSKATRDGAIDATVDHGNRWMVSKETG 422

Query: 461 DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           DIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 423 DIYSTNEPQFAFNSRIAFCLNMHNEAVRALRFPPNSHK 451

[Close]

BLAST of Carg19343 vs. TrEMBL
Match: tr|A0A0A0KCX2|A0A0A0KCX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077440 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 1.2e-227
Identity = 411/459 (89.54%), Postives = 433/459 (94.34%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQDAEMKELP P+SSS++  SPST+Q+LKEIVSL+ETGAYAREVRRIVRAIRLTMALR+
Sbjct: 1   MTQDAEMKELPAPLSSSSSSVSPSTIQNLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVLS FLN  LP GS+VHTRLSSF+PKEDD EMD+D+     TQAP KH LPEIEI
Sbjct: 61  KLKASVLSQFLNLVLPTGSEVHTRLSSFLPKEDDCEMDVDT----ATQAPAKHHLPEIEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           FCYL++L+FLID KKYG+AKACASASIARLKNLNRRTVDVL+SRLYFYYSLSYELTGDLA
Sbjct: 121 FCYLIVLIFLIDHKKYGDAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFE HSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEGHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAK SLLQAA KAPIAALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKGSLLQAAGKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQK ME ALRPYFELTNAVRIGDLELF+ VA++FSS+FSSDRTNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKHMEKALRPYFELTNAVRIGDLELFKIVAERFSSTFSSDRTNNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISLAD+A+KLRLDS NPIADAESIVSKAIRDGAIDATVDHA GWMVSKET
Sbjct: 361 LRNISISYSRISLADVAQKLRLDSANPIADAESIVSKAIRDGAIDATVDHANGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQ AFNSRIAFCLN HNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQAAFNSRIAFCLNTHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg19343 vs. TrEMBL
Match: tr|A0A2R6RHQ2|A0A2R6RHQ2_ACTCH (26S proteasome non-ATPase regulatory subunit 3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07144 PE=4 SV=1)

HSP 1 Score: 795.8 bits (2054), Expect = 5.9e-227
Identity = 404/459 (88.02%), Postives = 436/459 (94.99%), Query Frame = 0


Query: 40  MTQDAEMKELPPPISSSAAPTSPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRQ 99
           MTQD EMKELP P S+S     PSTLQHLKEI SL+ETGAYAREVRRIVRAIRLT+ LR+
Sbjct: 1   MTQDVEMKELPAP-SNSVTSAGPSTLQHLKEIASLIETGAYAREVRRIVRAIRLTITLRR 60

Query: 100 KLKASVLSPFLNFALPPGSDVHTRLSSFIPKEDDYEMDIDSETKALTQAPVKHPLPEIEI 159
           KLKASVL  FLNFAL PGS+VH+RLSS++PKED+++M++D+ T A TQAPVKH LPE+EI
Sbjct: 61  KLKASVLCAFLNFALVPGSEVHSRLSSYLPKEDEHDMEVDTATSA-TQAPVKHSLPELEI 120

Query: 160 FCYLLLLVFLIDQKKYGEAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELTGDLA 219
           +CYLL+L+FLIDQK+Y EAKAC+SASIARLKNLNRRT+DVL+++LYFYYSLSYELTGDLA
Sbjct: 121 YCYLLVLIFLIDQKRYNEAKACSSASIARLKNLNRRTIDVLAAKLYFYYSLSYELTGDLA 180

Query: 220 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 279
           EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 280 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 339
           CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWA+IVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAVIVRLLLGEIPERT 300

Query: 340 VFMQKGMETALRPYFELTNAVRIGDLELFRTVADKFSSSFSSDRTNNLIVRLRHNVIRTG 399
           VFMQKGME ALRPYFELTNAVR+GDLELF+TV +KFSS+FSSDRT NLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMEKALRPYFELTNAVRVGDLELFKTVTEKFSSTFSSDRTQNLIVRLRHNVIRTG 360

Query: 400 LRNISISYSRISLADIAKKLRLDSENPIADAESIVSKAIRDGAIDATVDHAKGWMVSKET 459
           LRNISISYSRISLAD+AKKLRLDS N +ADAESIVSKAIRDGAIDAT+DHAKGWMVSKET
Sbjct: 361 LRNISISYSRISLADVAKKLRLDSANSVADAESIVSKAIRDGAIDATLDHAKGWMVSKET 420

Query: 460 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 499
           GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 457

The following BLAST results are available for this feature:

BLAST of Carg19343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953127.1	1.7e-254	99.78	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita moschata] >XP...	[more]
XP_023554693.1	8.5e-254	99.35	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. p...	[more]
XP_022969475.1	4.7e-252	98.91	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima] >XP_0...	[more]
XP_022136128.1	2.5e-237	93.48	probable 26S proteasome non-ATPase regulatory subunit 3 [Momordica charantia] >X...	[more]
XP_008447941.1	1.8e-235	93.89	PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo...	[more]

BLAST of Carg19343 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20200.1	5.4e-210	79.96	PAM domain (PCI/PINT associated module) protein	[more]
AT1G75990.1	3.7e-203	77.39	PAM domain (PCI/PINT associated module) protein	[more]

BLAST of Carg19343 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93768\|PSMD3_TOBAC	1.5e-222	86.27	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum OX=...	[more]
sp\|Q06364\|PSMD3_DAUCA	1.4e-220	84.13	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039...	[more]
sp\|Q9LNU4\|PSD3A_ARATH	9.7e-209	79.96	26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana...	[more]
sp\|Q9LQR8\|PSD3B_ARATH	6.7e-202	77.39	26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana...	[more]
sp\|Q2KJ46\|PSMD3_BOVIN	1.5e-100	46.91	26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus OX=9913 GN=PSMD3 PE...	[more]

BLAST of Carg19343 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJ75\|A0A1S3BJ75_CUCME	1.2e-235	93.89	probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S4E2Q6\|A0A1S4E2Q6_CUCME	2.7e-232	91.07	probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0K1C2\|A0A0A0K1C2_CUCSA	5.1e-231	92.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014490 PE=4 SV=1	[more]
tr\|A0A0A0KCX2\|A0A0A0KCX2_CUCSA	1.2e-227	89.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077440 PE=4 SV=1	[more]
tr\|A0A2R6RHQ2\|A0A2R6RHQ2_ACTCH	5.9e-227	88.02	26S proteasome non-ATPase regulatory subunit 3 like OS=Actinidia chinensis var. ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000502	proteasome complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0030234	enzyme regulator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042176	regulation of protein catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR013586	26S_Psome_reg_C
IPR000717	PCI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042176	regulation of protein catabolic process
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0030234	enzyme regulator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19343-RA	Carg19343-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 495..522
None	No IPR available	SMART	SM00753	PINT	coord: 386..479 e-value: 4.5E-24 score: 96.0
None	No IPR available	GENE3D	G3DSA:1.25.40.570		coord: 271..401 e-value: 9.4E-31 score: 108.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 492..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 492..521
None	No IPR available	PANTHER	PTHR10758:SF7	SUBFAMILY NOT NAMED	coord: 40..528
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 40..528
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 386..479 e-value: 4.5E-24 score: 96.0
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 352..457 e-value: 1.5E-22 score: 79.9
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 280..461 score: 26.167
IPR013586	26S proteasome regulatory subunit, C-terminal	PFAM	PF08375	Rpn3_C	coord: 461..527 e-value: 2.4E-27 score: 95.0
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 388..462

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19343	Cla015816	Watermelon (97103) v1	carwmB0305
Carg19343	Csa7G014490	Cucumber (Chinese Long) v2	carcuB0342
Carg19343	MELO3C013344	Melon (DHL92) v3.5.1	carmeB0321
Carg19343	ClCG02G003980	Watermelon (Charleston Gray)	carwcgB0308
Carg19343	CSPI07G01080	Wild cucumber (PI 183967)	carcpiB0348
Carg19343	Cucsa.370430	Cucumber (Gy14) v1	carcgyB0371
Carg19343	CmaCh11G013680	Cucurbita maxima (Rimu)	carcmaB0439
Carg19343	CmoCh19G007570	Cucurbita moschata (Rifu)	carcmoB0433
Carg19343	CmoCh11G017500	Cucurbita moschata (Rifu)	carcmoB0432
Carg19343	Cp4.1LG15g05990	Cucurbita pepo (Zucchini)	carcpeB0436
Carg19343	Cp4.1LG04g04770	Cucurbita pepo (Zucchini)	carcpeB0439
Carg19343	CsGy7G000900	Cucumber (Gy14) v2	carcgybB0326
Carg19343	MELO3C013344.2	Melon (DHL92) v3.6.1	carmedB0330
Carg19343	CsaV3_7G001120	Cucumber (Chinese Long) v3	carcucB0347
Carg19343	Cla97C02G030820	Watermelon (97103) v2	carwmbB0324
Carg19343	Bhi05G001463	Wax gourd	carwgoB0397

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19343	Carg05716	Silver-seed gourd	carcarB343

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19343	Wild cucumber (PI 183967)	carcpiB0347
Carg19343	Cucumber (Chinese Long) v2	carcuB0341
Carg19343	Bottle gourd (USVL1VR-Ls)	carlsiB290
Carg19343	Cucurbita maxima (Rimu)	carcmaB0440