Carg19326 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19326
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	reticuline oxidase-like protein
Location	Cucurbita_argyrosperma_scaffold_137 : 416799 .. 418489 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTACTCTTACAGCCAGTTTCCAGTAAAGTGAAGAAGGGGACTCGAACAGTCAGAGCCTCAGTCGTGGCCTTGTTCCTCGGGAAATCGGAAGAAGTCGTTTCCTTGTTGGGAAAAGAATTCCCCGAATTGGGGTTGCTGAAAGAGAACTGTATCGAACTTAGTTGGATCGACTCTGTTCTCTGGTGGGGTAATTTCGATAACGGAACTTCACCCAAAGCTCTACTCGACCGCAATCTCGATTCATCAGGGTTTCTCAGAAGGAAATCGGATTACGTTCAGACACCCATTTCCAGAGATGGGTTGGATTGGTTGTACAAGAAGATGATCGAAATCGGCAAAACAGGGCTTGTTTTCAACCCCTATGGCGGAAAGATGAGCGAAATTCCATCTACAGCGACCCCATTTCCTCACCGAGCAGGGAATCTGTACAAGATCCAGTACTCAGTGAACTGGAACGAACCAGGGCCGGAGGCAGACCAGGAGTTTGTGAAGCAAATAAGAAGGCTGTACAGTTACATGACCCCCTTTGTGTCGAAGAATCCAAGACAATCCTTCCTGAACTACAGAGATTTGGACATTGGCACCAACAACAACGACAAGAACAGCTTCGAGGATGGGAAGGTTTATGGATTGAAGTACTTCGGGGAGAATTTCGATAGGCTGGTGAAGGTGAAGACGGCTGTGGATCCAGAGAATTTCTTCTGGAATGAACAGAGTATTCCAACTCTTTCAAGTAAGCAATGAGATGGTCCTAGGATTTGGTGTCGGTTATCTACATTATTATTTTACTTGCATTGCATTGTAATGTGATGCGAGAACCACAGGGTTATTAGAATTGAAAAAGCTGATTGTTTCGGTTTTTCTGATGGAAACCAAGATTTATAGATATATGCATTTACAGTTCGTACCATATTTCTCATTACGTTTGTATGAAGATGAGTTAATGAAAGTAATAAAACTAGTGGAAATCAGAGTCGCCATTGGAGTCGAGTCTTGGTGCATAAAAACTTGACTTTTCTGTCCTCCTCTGTCTCCCCCGGGGCGGTGGTTGGCTGAAAAGATTGAAAATTTGGCAATCAATTAAGGCATCATATCGTGTGTTGTTGCTGCTCATGTGTGCAAGGCTGCGTTCTGCTGCAAGTGTTTAAAGGGGAATTGGTAAAGTTATTATTAAATGGAATAGGTGACAATAAACAAACCCAAAAGTTGGCTTTTTTTTTTTCAAGGGAGGGTCCCAATAATGAATTGAAAGAAGCAGCAGCTTTAGCGAACACGTATAGCCAAAGAAAAGCCAACAAGGCAAAAAAGATGCTACTATTGTTCAATTCACTCTCATTTGCGCCACAACCTCCGGCCTTCACTAAGAATCAGAAGCGGCGGCTGTGATTTCGAGGGCAGTTTAATCTCCGATGCGTTGCGCGGATTGTTGCTGTGACTGTGTTTGTAAACAAGCTACCAAATGTTCATGGTAGTATGGCTTAAAAGACATAGTAACATAATTAGTTTGCCTATCTCTATCTCCATCTTCAAAATGAAGTTAGATCCACGTTTTCCTTGTTCTTTCTCACTGAATCTGAGCCATTTTGCTAACTGCAGAGCTCCAGTCTTCTGGTTTGAGTTGGTGTAGAAGAAGTTGGAGGCCGACCATGGTGGCCATCATCATGGTTACACCACAGCTTTTGTAA

mRNA sequence

ATGAGGCTACTCTTACAGCCAGTTTCCAGTAAAGTGAAGAAGGGGACTCGAACAGTCAGAGCCTCAGTCGTGGCCTTGTTCCTCGGGAAATCGGAAGAAGTCGTTTCCTTGTTGGGAAAAGAATTCCCCGAATTGGGGTTGCTGAAAGAGAACTGTATCGAACTTAGTTGGATCGACTCTGTTCTCTGGTGGGAGCTCCAGTCTTCTGGTTTGAGTTGGTGTAGAAGAAGTTGGAGGCCGACCATGGTGGCCATCATCATGGTTACACCACAGCTTTTGTAA

Coding sequence (CDS)

ATGAGGCTACTCTTACAGCCAGTTTCCAGTAAAGTGAAGAAGGGGACTCGAACAGTCAGAGCCTCAGTCGTGGCCTTGTTCCTCGGGAAATCGGAAGAAGTCGTTTCCTTGTTGGGAAAAGAATTCCCCGAATTGGGGTTGCTGAAAGAGAACTGTATCGAACTTAGTTGGATCGACTCTGTTCTCTGGTGGGAGCTCCAGTCTTCTGGTTTGAGTTGGTGTAGAAGAAGTTGGAGGCCGACCATGGTGGCCATCATCATGGTTACACCACAGCTTTTGTAA

Protein sequence

MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLSWCRRSWRPTMVAIIMVTPQLL

Homology

[Close]

BLAST of Carg19326 vs. NCBI nr
Match: XP_022925694.1 (berberine bridge enzyme-like 21 [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-26
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDS
Sbjct: 322 MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLQKENCIELSWIDS 381

Query: 61  VLWWELQSSGLS 73
           VLWW    +G S
Sbjct: 382 VLWWGNFDNGTS 393

[Close]

BLAST of Carg19326 vs. NCBI nr
Match: XP_022977485.1 (berberine bridge enzyme-like 21 [Cucurbita maxima])

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-26
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDS
Sbjct: 322 MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLQKENCIELSWIDS 381

Query: 61  VLWWELQSSGLS 73
           VLWW    +G S
Sbjct: 382 VLWWGNFDNGTS 393

[Close]

BLAST of Carg19326 vs. NCBI nr
Match: XP_023544589.1 (berberine bridge enzyme-like 21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25
Identity = 64/72 (88.89%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLL KEFPELGL KENCIELSWIDS
Sbjct: 302 MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLAKEFPELGLQKENCIELSWIDS 361

Query: 61  VLWWELQSSGLS 73
           VLWW    +G S
Sbjct: 362 VLWWGNFDNGTS 373

[Close]

BLAST of Carg19326 vs. NCBI nr
Match: XP_008439529.2 (PREDICTED: reticuline oxidase-like protein [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 7.2e-23
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSK+KKGTRT+RA+V+ALFLGKSEE+VSLL KEFPELGL KENC E+SWIDS
Sbjct: 283 MRLLLQPVSSKIKKGTRTIRATVIALFLGKSEELVSLLKKEFPELGLQKENCTEMSWIDS 342

Query: 61  VLWW 65
           VLWW
Sbjct: 343 VLWW 346

[Close]

BLAST of Carg19326 vs. NCBI nr
Match: XP_004134553.1 (PREDICTED: reticuline oxidase-like protein [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSK+KKGTRT+RASVVALFLGKSEE+VSLL KE PELGL KENC E+SWIDS
Sbjct: 283 MRLLLQPVSSKIKKGTRTIRASVVALFLGKSEELVSLLKKELPELGLQKENCTEMSWIDS 342

Query: 61  VLWW 65
           VLWW
Sbjct: 343 VLWW 346

[Close]

BLAST of Carg19326 vs. TAIR10
Match: AT4G20830.1 (FAD-binding Berberine family protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-18
Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MR+L+QPV+   +K  +TVRASVVALFLG+++EVV+LL KEFPELGL KENC E++W  S
Sbjct: 294 MRMLIQPVT---RKKVKTVRASVVALFLGRADEVVALLSKEFPELGLKKENCSEMTWFQS 353

Query: 61  VLWWE 66
            LWW+
Sbjct: 354 ALWWD 355

[Close]

BLAST of Carg19326 vs. TAIR10
Match: AT4G20840.1 (FAD-binding Berberine family protein)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-18
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           +R+L+QPV+   +K  +TVRA+VVALFLG++EEVV+LLGKEFPEL L KENC E++W  S
Sbjct: 293 LRMLIQPVT---RKKVKTVRATVVALFLGRAEEVVALLGKEFPELSLKKENCSEMTWFQS 352

Query: 61  VLWWE 66
            LWW+
Sbjct: 353 ALWWD 354

[Close]

BLAST of Carg19326 vs. TAIR10
Match: AT1G01980.1 (FAD-binding Berberine family protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.4e-17
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRL+LQPV+   +  T+TVRASVVALFLGK  +++SLL KEFPELGL  ENC E++WI S
Sbjct: 292 MRLMLQPVT---RNTTQTVRASVVALFLGKQSDLMSLLTKEFPELGLKPENCTEMTWIQS 351

Query: 61  VLWW 65
           V+WW
Sbjct: 352 VMWW 352

[Close]

BLAST of Carg19326 vs. TAIR10
Match: AT1G11770.1 (FAD-binding Berberine family protein)

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-17
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPV+   +   +TVRASVVALFLG    V+S+L KEFPELGL KENC E++WI S
Sbjct: 287 MRLLLQPVT---RNKMQTVRASVVALFLGDQNTVMSMLTKEFPELGLKKENCTEMTWIQS 346

Query: 61  VLWW 65
           V+WW
Sbjct: 347 VMWW 347

[Close]

BLAST of Carg19326 vs. TAIR10
Match: AT1G30740.1 (FAD-binding Berberine family protein)

HSP 1 Score: 67.0 bits (162), Expect = 6.9e-12
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MR+LL   SS  +  T TV   + AL+LGK+++VV  + +EFPELGL KE+C E++WI S
Sbjct: 286 MRVLL---SSPTQNKTSTVNTKLRALYLGKADDVVLKMAEEFPELGLKKEDCKEMTWIQS 345

Query: 61  VLWW 65
           +LWW
Sbjct: 346 LLWW 346

[Close]

BLAST of Carg19326 vs. Swiss-Prot
Match: sp|Q9SVG4|RETOL_ARATH (Berberine bridge enzyme-like 19 OS=Arabidopsis thaliana OX=3702 GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-17
Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MR+L+QPV+   +K  +TVRASVVALFLG+++EVV+LL KEFPELGL KENC E++W  S
Sbjct: 294 MRMLIQPVT---RKKVKTVRASVVALFLGRADEVVALLSKEFPELGLKKENCSEMTWFQS 353

Query: 61  VLWWE 66
            LWW+
Sbjct: 354 ALWWD 355

[Close]

BLAST of Carg19326 vs. Swiss-Prot
Match: sp|Q9SVG3|BBE21_ARATH (Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.3e-17
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           +R+L+QPV+   +K  +TVRA+VVALFLG++EEVV+LLGKEFPEL L KENC E++W  S
Sbjct: 293 LRMLIQPVT---RKKVKTVRATVVALFLGRAEEVVALLGKEFPELSLKKENCSEMTWFQS 352

Query: 61  VLWWE 66
            LWW+
Sbjct: 353 ALWWD 354

[Close]

BLAST of Carg19326 vs. Swiss-Prot
Match: sp|Q9LPC3|BBE1_ARATH (Berberine bridge enzyme-like 1 OS=Arabidopsis thaliana OX=3702 GN=SEC1A PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-16
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRL+LQPV+   +  T+TVRASVVALFLGK  +++SLL KEFPELGL  ENC E++WI S
Sbjct: 292 MRLMLQPVT---RNTTQTVRASVVALFLGKQSDLMSLLTKEFPELGLKPENCTEMTWIQS 351

Query: 61  VLWW 65
           V+WW
Sbjct: 352 VMWW 352

[Close]

BLAST of Carg19326 vs. Swiss-Prot
Match: sp|Q9SA99|BBE2_ARATH (Berberine bridge enzyme-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11770 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPV+   +   +TVRASVVALFLG    V+S+L KEFPELGL KENC E++WI S
Sbjct: 287 MRLLLQPVT---RNKMQTVRASVVALFLGDQNTVMSMLTKEFPELGLKKENCTEMTWIQS 346

Query: 61  VLWW 65
           V+WW
Sbjct: 347 VMWW 347

[Close]

BLAST of Carg19326 vs. Swiss-Prot
Match: sp|Q9SA89|BBE12_ARATH (Berberine bridge enzyme-like 12 OS=Arabidopsis thaliana OX=3702 GN=At1g30740 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MR+LL   SS  +  T TV   + AL+LGK+++VV  + +EFPELGL KE+C E++WI S
Sbjct: 286 MRVLL---SSPTQNKTSTVNTKLRALYLGKADDVVLKMAEEFPELGLKKEDCKEMTWIQS 345

Query: 61  VLWW 65
           +LWW
Sbjct: 346 LLWW 346

[Close]

BLAST of Carg19326 vs. TrEMBL
Match: tr|A0A1S3AYZ9|A0A1S3AYZ9_CUCME (reticuline oxidase-like protein OS=Cucumis melo OX=3656 GN=LOC103484297 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-23
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSK+KKGTRT+RA+V+ALFLGKSEE+VSLL KEFPELGL KENC E+SWIDS
Sbjct: 283 MRLLLQPVSSKIKKGTRTIRATVIALFLGKSEELVSLLKKEFPELGLQKENCTEMSWIDS 342

Query: 61  VLWW 65
           VLWW
Sbjct: 343 VLWW 346

[Close]

BLAST of Carg19326 vs. TrEMBL
Match: tr|A0A0A0KM88|A0A0A0KM88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525670 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-23
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSK+KKGTRT+RASVVALFLGKSEE+VSLL KE PELGL KENC E+SWIDS
Sbjct: 283 MRLLLQPVSSKIKKGTRTIRASVVALFLGKSEELVSLLKKELPELGLQKENCTEMSWIDS 342

Query: 61  VLWW 65
           VLWW
Sbjct: 343 VLWW 346

[Close]

BLAST of Carg19326 vs. TrEMBL
Match: tr|A0A0R0G721|A0A0R0G721_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775893 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.9e-21
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSKV KGTRTVRASVVALFLG + EVVS+L KEFP LGL KENC E+SWIDS
Sbjct: 293 MRLLLQPVSSKVVKGTRTVRASVVALFLGGANEVVSILAKEFPLLGLKKENCTEVSWIDS 352

Query: 61  VLWWELQSS 70
           VLWW   +S
Sbjct: 353 VLWWNDDNS 361

[Close]

BLAST of Carg19326 vs. TrEMBL
Match: tr|I1K2X4|I1K2X4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100781731 PE=3 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.8e-20
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MRLLLQPVSSKV KG RT+RA+V+ALFLG ++EVV+L+GKEFP LGL KENC ELSWIDS
Sbjct: 300 MRLLLQPVSSKVVKGQRTIRATVMALFLGGADEVVTLMGKEFPALGLSKENCTELSWIDS 359

Query: 61  VLWW 65
           VLWW
Sbjct: 360 VLWW 363

[Close]

BLAST of Carg19326 vs. TrEMBL
Match: tr|M5WHH5|M5WHH5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa006568mg PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.4e-20
Identity = 48/64 (75.00%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDS 60
           MR+LLQPV+SKVKKG +TVR S++A FLG ++++VSLLGKEFPELGL KENC+E+SWIDS
Sbjct: 157 MRMLLQPVTSKVKKGEKTVRISILAEFLGNADQLVSLLGKEFPELGLKKENCMEMSWIDS 216

Query: 61  VLWW 65
           VLWW
Sbjct: 217 VLWW 220

The following BLAST results are available for this feature:

BLAST of Carg19326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925694.1	4.1e-26	90.28	berberine bridge enzyme-like 21 [Cucurbita moschata]	[more]
XP_022977485.1	4.1e-26	90.28	berberine bridge enzyme-like 21 [Cucurbita maxima]	[more]
XP_023544589.1	2.0e-25	88.89	berberine bridge enzyme-like 21 [Cucurbita pepo subsp. pepo]	[more]
XP_008439529.2	7.2e-23	85.94	PREDICTED: reticuline oxidase-like protein [Cucumis melo]	[more]
XP_004134553.1	1.2e-22	87.50	PREDICTED: reticuline oxidase-like protein [Cucumis sativus]	[more]

BLAST of Carg19326 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20830.1	1.3e-18	64.62	FAD-binding Berberine family protein	[more]
AT4G20840.1	2.9e-18	63.08	FAD-binding Berberine family protein	[more]
AT1G01980.1	1.4e-17	65.63	FAD-binding Berberine family protein	[more]
AT1G11770.1	7.2e-17	65.63	FAD-binding Berberine family protein	[more]
AT1G30740.1	6.9e-12	51.56	FAD-binding Berberine family protein	[more]

BLAST of Carg19326 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVG4\|RETOL_ARATH	2.4e-17	64.62	Berberine bridge enzyme-like 19 OS=Arabidopsis thaliana OX=3702 GN=At4g20830 PE=...	[more]
sp\|Q9SVG3\|BBE21_ARATH	5.3e-17	63.08	Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=...	[more]
sp\|Q9LPC3\|BBE1_ARATH	2.6e-16	65.63	Berberine bridge enzyme-like 1 OS=Arabidopsis thaliana OX=3702 GN=SEC1A PE=2 SV=...	[more]
sp\|Q9SA99\|BBE2_ARATH	1.3e-15	65.63	Berberine bridge enzyme-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11770 PE=2...	[more]
sp\|Q9SA89\|BBE12_ARATH	1.3e-10	51.56	Berberine bridge enzyme-like 12 OS=Arabidopsis thaliana OX=3702 GN=At1g30740 PE=...	[more]

BLAST of Carg19326 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYZ9\|A0A1S3AYZ9_CUCME	4.8e-23	85.94	reticuline oxidase-like protein OS=Cucumis melo OX=3656 GN=LOC103484297 PE=3 SV=...	[more]
tr\|A0A0A0KM88\|A0A0A0KM88_CUCSA	8.1e-23	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525670 PE=3 SV=1	[more]
tr\|A0A0R0G721\|A0A0R0G721_SOYBN	9.9e-21	79.71	Uncharacterized protein OS=Glycine max OX=3847 GN=100775893 PE=3 SV=1	[more]
tr\|I1K2X4\|I1K2X4_SOYBN	3.8e-20	79.69	Uncharacterized protein OS=Glycine max OX=3847 GN=100781731 PE=3 SV=2	[more]
tr\|M5WHH5\|M5WHH5_PRUPE	8.4e-20	75.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa006568mg PE=3 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19326-RA	Carg19326-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.462.20		coord: 1..84 e-value: 1.0E-12 score: 50.2
None	No IPR available	PANTHER	PTHR32448	FAMILY NOT NAMED	coord: 1..68
None	No IPR available	PANTHER	PTHR32448:SF34	F22M8.11 PROTEIN-RELATED	coord: 1..68

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19326	Lsi02G009790	Bottle gourd (USVL1VR-Ls)	carlsiB274
Carg19326	Cla97C01G025400	Watermelon (97103) v2	carwmbB0307
Carg19326	Bhi03G000163	Wax gourd	carwgoB0385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19326	Silver-seed gourd	carcarB326
Carg19326	Silver-seed gourd	carcarB328
Carg19326	Cucumber (Gy14) v2	carcgybB0312
Carg19326	Cucumber (Gy14) v1	carcgyB0350
Carg19326	Cucurbita maxima (Rimu)	carcmaB0415
Carg19326	Cucurbita maxima (Rimu)	carcmaB0411
Carg19326	Cucurbita maxima (Rimu)	carcmaB0413
Carg19326	Cucurbita moschata (Rifu)	carcmoB0408
Carg19326	Cucurbita moschata (Rifu)	carcmoB0410
Carg19326	Cucurbita pepo (Zucchini)	carcpeB0412
Carg19326	Cucurbita pepo (Zucchini)	carcpeB0413
Carg19326	Cucurbita pepo (Zucchini)	carcpeB0415
Carg19326	Cucurbita pepo (Zucchini)	carcpeB0416
Carg19326	Wild cucumber (PI 183967)	carcpiB0332
Carg19326	Cucumber (Chinese Long) v2	carcuB0326
Carg19326	Cucumber (Chinese Long) v3	carcucB0332
Carg19326	Bottle gourd (USVL1VR-Ls)	carlsiB273
Carg19326	Melon (DHL92) v3.5.1	carmeB0301
Carg19326	Melon (DHL92) v3.6.1	carmedB0312
Carg19326	Watermelon (Charleston Gray)	carwcgB0292
Carg19326	Watermelon (Charleston Gray)	carwcgB0293
Carg19326	Watermelon (97103) v1	carwmB0291
Carg19326	Watermelon (97103) v1	carwmB0292