Carg19270 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19270
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Katanin p60 ATPase-containing subunit A-like 2
Location	Cucurbita_argyrosperma_scaffold_137 : 90672 .. 95263 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGCGAGGACGATGCTGCTGCTGCTGCAACTCGTTGGACGTTCCAGGCATTGCTTACCTTTCTCTTTTAACTAATTTGTTTTGCTGCTTAGGAGGAAAAAGACAGAAATCAGTGAATAATGTGTTGATCCAGAGGTTGTAGGAGCTGTATTTTGCTTAATTTTTAATTCAGCCTCAGGTTTAGACTGGCCTTGTGTCTTGGTTGAGGAAATCTTAAATTTAGAAAAAGGAAGTCAAAGCTGTTCTACCTTCCCTAGTTTCCTCATCGGTTTTAATTTAACTTTTGATCATTTCTAATCGGTTTGTGTCAGGCATGTGGTGCAACCGCTGCTGTGTATTGTTCTTTCTTCTTCTCTTTTGGCTGGAGTAGAATCTGAATTTTGGCGAACTGTGTATAATTTTGGTAAACTAAACGTTCTTCTGCTTGTAGGATTTCAAGAGGTTCTATGATTCCACATTTGGGAGAAAGAAGGAGTCTAAGTCCCGGAATGGTGAGGCCTCTGATGCGGCTTTGAAAAACGAGAGTACATTGGGCACAGCGGCAAATGGAACTGCGCATGGGCCTGAATTGGCCATATACGAGCAGTTCCGGTTGCAGGTAATGCATTTGATTTTTCAGTTGTGACAATAGTTGACTGATCTGGGATGCATGGGTTGGTAAAGTGCTGATGATTCCATCAAATTCTCCTCGTCAATTGTTTTGCAGCAGAGTGGCTCAAGTTCGGCACCTGGTGCTGTGCCCAACCGTAATACGGTGACTATGTGAGTTGTCTCTATCAATTTCTTTAGCAGTTATATTTTTCTTTTCACTGTGGAAAACACATTAGCTTACTTGTGTCGAGGATTGTTGGAGTCCCACATGGCTAATTAAGGGGAAGATCATGAGTATATAAGGGACACTATCTCTATTGGTACGAGGCATTTTGGAAGAATCAAAAGCAAAAACGCTAGAGTTTAAGCTCAAAGTGGACAATATCATATAATTGTGGAGGTTTGTTGTTCCTGTTAGTGGTATCAGAGCCATACCCTTATCTTAACTTAGCTATGTCAATAGAATCCTTAAGTGTCGAACAAAGAAGTTGTGAGCCTCCAAGGTGTAGTCATCAACACAAATAAACTTTGTGAATTAGCTTGAGTAGATGTTCATTCACCAAAATTATACCAGAATTGCATATTTGAATTGAAATGAGTTTTTGTCTTAAGGATTAGTTATTTCCTGTGATTTTGTAGCTTACCTAATCATCATCATTATTATTTTTTACCTTGTCAGACAGAAGCCTTTGCTTCCTCCATTGGAATCTACAGAAATGCGCAACTTAGCTGAAAGCATTGCTAGGTAACTGACAAAGTGCTATACATCAATTGAGATTATCTTTAATGATTGAAAACATATGGATTTCTTAGCAAATACATTATCATTATATCAACAATTTTTTCAGGCCTCCTTACTGTCCTACACTGCTTTATTCAGGGATATAATACGTGGAAATCCAGATATTAAGTGGGAAAGCATCAAGGGTTTAGAACATGCCAAATGCTTACTTAAGGAAGCAGTGGTCATGCCAATTAAATACCCCAAGTGAGTTTTTTCTCAATACTATGGACTATTTGATCATAGTTTAGCATCGACTCTTTCACTTGAGGTCGAAGGTTCAAATTCTCATCCTTATTGTTGAAAAGAAAAACATTTGTTGAACTAAGAAAATAATTATATATAATATAAGTGCTAGTTAAAAATTAAATTTAATCAGATGAAGTTCATGTATTAAAAATAATGAGGTTAAATTAATGTCTACTACCACTTAAGTAAAGTTTTTTGAACGATCATTTTGTCTGGCAAACCATTTATATTTCTTTTCAAGATTTATCCTATGACCGTCATGATAGATTTAGCTAACTGTTGTTGGGATAGTATGACATTGGGATTTCCTATTTACTGCTCTACTGATGGTTGATATAAATTTCTTGGCTGTAACGTTGAACCAAAAAATATATGCCTTGTACGGAATTTACGAATGCAATTTTGCATTACAACCTTTTGGTACTTTTTTTTTTTTTTTTTTTTTTTTGCCTGTATTGCATTTCTACTAAAATCGTCTCGTGAGCCATTCTTAAACTCACATATCTCCTTGATAGATATTTTCGGGGTCTTCTATCTCCATGGAAAGGCATCCTCCTCTTTGGCCCTCCTGGAACGGGAAAGGTATGTAGGTTTTAGTTGAAATATTTTGTTTTAAAAGCTAAGTCTAATATTCGGCTGTAGTCATTGTTAGTACAATTGAGATGATACTTCAGTAAAAATCTGTTCCTTTATAAATTCCCATAAACACAAATAAACTATCCATAAAGTTATTGCTTTGCGGAAATCCATGTTTCTGCGAATCGTTATCTAATACAAGCTTTGTGAATTAGCTTGTAAAATCATTTTTCTGGCATTCTGCAATGGAAGCTTAAACAGCCTTCCTTGTAATTCCTCGAGAAATTTTGGATATTTCTTGGAAATTGAGAGAAAGTGTATTCCAGTGTTCGTCACTTTTTCAGTTTTTTTTTTTTTTTATTATGGTCACCTTATCAATTTTTTTGGAGTTTTCGTATATTGCTAATTGAGCTGTAATGAAGGTCTTATGGTCTATTTTTTTCCTTATTTAGATAACCTTTCATGTTAATTATTCAGACCATGCTTGCAAAAGCTGTTGCAACTGAGTGCAAGACAACATTTTTCAATATTTCAGCATCATCTGTGGTGAGCAAGTGGCGAGGTATGAGTACATACATGAATATGTTTTATTCTTTCTCAGTTTGTATAGTCAACATTTGAACTTGTAATAAAAAATTTGAAACACGTGATCTGTCTCTTTTTGAATCAAATAAACATAATATTCTTTTACGTGTTTAAACTATCCACATTCTGTACTTAAAAGTTTTCGGAAATAAAGATTAGCCATTGTCGTGGCCATAACTTTTTTTTAAATGGTAAAACCGAAGTCTCATTAATGGTCCAGCATCATTCTCTTTTAGGAGCGGTGTCATTTAATTTCATTGCTCTGCTATTAATTTCTTAAATTGAACTGATGATCTTCTTTCTTAATCACTTGCTTTGTTTCTTAAATTTCTCTGCTTCAATTTCTTTAATAGGTGATTCGGAGAAATCCATCAAGGTCTTATTTGAGCTTGCTAGGCATCATGCACCATCTACTATATTTCTAGATGAAATTGATGCAATTATTAGTCATCGTGGTGAAGGACGCAGTGAACATGAAGCTAGTAGGCGTCTGAAAACAGAGTTGCTCATCCAGGTCCTATCTTTGTTCAATAGAATAATATCATGAGCAGTTATTCTGTGTAGCATCTCCCATCGTTATACCTCTTTCAAAGAGGGTTCACATGCTTATATTTGAACCCTTCACGTGTTTCAGTTCTCGCCCAAGAACGATAACTTAGCTGTTTGTTATTTATTAAAATTATATTACTTAAATGATCACAAGTTAACTCTGTAGCTTCGATTTGTTATGGCATTGCTAAGCCAACCGTCTTGGAATTCTTTTGCATCTTTTATCATCGTTGCCCAATGCATACCAAGATTCCAGCCATCTTATTGAAGAAATCACGCTAGTCTTTTCTATCTAATTGTTGCCCATACAAATATTGATTGTTCGATTGGATTGCAGATGGATGGGTTAATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTTCCCTGGGAACTGGATGCAGCCATGCTTCGTCGTTTAGAAAAGAGAGTATCCTCTTATCATTGCAGTCTTTGTTTTGATAGAATAATTAGAACAGTGGTCAATAGCTTATAGTGTCTTTACGATGATAGAACTGATTACCAACCGCTTCTTGAGTCACAGCCCCAAAAAAGTCGTTAATTCTGCTCACTGCCATCTATATCACAATTCCTCAAAATTTAAGTCATTTTTATGGCTACTCGTAAGAGAAGAGTTTTACATCACAAATTTTTGCTTTTGGAACTTAAGTCTTGAGTTTTTTCCCCCGAACGAAACAATGAGATTATCTATGTTCTTTCCAAACTCAAAAATTGCATATATGCTTCATTGTGAAAAGAACCATAATCATATTGCCTCTTTTTATGCATGCTTCGACATTCCATAACTTGGTAAAAGGAGCTTGAATCTAGGGGAAAAAATCAGCAACTTGAATAAAGGGATTTTTGATTCAGAAACTGCTACAATATTCTAATTTAAGACTTATTTTGGCTTAGAACTTCCATCTGCATGATAGCTTGATGAGTATCAACCGCATTTGAATGATTATATCCCCAAGTGATTCTCCTTTGACCATTGTATAAAAGATACTTGTGCCTCTGCAGAACCAGAAGCTAGAAAAGCTATGTTTGAAGAACTTCTTCCTCAATCTGGAGTTGAGGAACTTCCTTATGATATATTGATGGAAAGAACAGAAGGCTATTCAGTATCTGATATTCGATTAGTGTGCAAAGAGGCTGCTATGCAGCCACTACGCCCCCTTAATGGCTCAACTTGAGGAACAGCAAAAAGAATTGCCCGAAGAACAACAGGGAGTCGTGCCTGAAGAA

mRNA sequence

ATGGCCGGCGAGGACGATGCTGCTGCTGCTGCAACTCGTTGGACGTTCTATGATTCCACATTTGGGAGAAAGAAGGAGTCTAAGTCCCGGAATGGTGAGGCCTCTGATGCGGCTTTGAAAAACGAGAGTACATTGGGCACAGCGGCAAATGGAACTGCGCATGGGCCTGAATTGGCCATATACGAGCAGTTCCGGTTGCAGCAGAGTGGCTCAAGTTCGGCACCTGGTGCTGTGCCCAACCGTAATACGAAGCCTTTGCTTCCTCCATTGGAATCTACAGAAATGCGCAACTTAGCTGAAAGCATTGCTAGGGATATAATACGTGGAAATCCAGATATTAAGTGGGAAAGCATCAAGGGTTTAGAACATGCCAAATGCTTACTTAAGGAAGCAGTGGTCATGCCAATTAAATACCCCAAATATTTTCGGGGTCTTCTATCTCCATGGAAAGGCATCCTCCTCTTTGGCCCTCCTGGAACGGGAAAGACCATGCTTGCAAAAGCTGTTGCAACTGAGTGCAAGACAACATTTTTCAATATTTCAGCATCATCTGTGGTGAGCAAGTGGCGAGGTGATTCGGAGAAATCCATCAAGGTCTTATTTGAGCTTGCTAGGCATCATGCACCATCTACTATATTTCTAGATGAAATTGATGCAATTATTAGTCATCGTGGTGAAGGACGCAGTGAACATGAAGCTAGTAGGCGTCTGAAAACAGAGTTGCTCATCCAGATGGATGGGTTAATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTTCCCTGGGAACTGGATGCAGCCATGCTTCGTCGTTTAGAAAAGAGAGTATCCTCTTATCATTGCAAACCAGAAGCTAGAAAAGCTATGTTTGAAGAACTTCTTCCTCAATCTGGAGTTGAGGAACTTCCTTATGATATATTGATGGAAAGAACAGAAGGCTATTCATGTGCAAAGAGGCTGCTATGCAGCCACTACGCCCCCTTAATGGCTCAACTTGAGGAACAGCAAAAAGAATTGCCCGAAGAACAACAGGGAGTCGTGCCTGAAGAA

Coding sequence (CDS)

ATGGCCGGCGAGGACGATGCTGCTGCTGCTGCAACTCGTTGGACGTTCTATGATTCCACATTTGGGAGAAAGAAGGAGTCTAAGTCCCGGAATGGTGAGGCCTCTGATGCGGCTTTGAAAAACGAGAGTACATTGGGCACAGCGGCAAATGGAACTGCGCATGGGCCTGAATTGGCCATATACGAGCAGTTCCGGTTGCAGCAGAGTGGCTCAAGTTCGGCACCTGGTGCTGTGCCCAACCGTAATACGAAGCCTTTGCTTCCTCCATTGGAATCTACAGAAATGCGCAACTTAGCTGAAAGCATTGCTAGGGATATAATACGTGGAAATCCAGATATTAAGTGGGAAAGCATCAAGGGTTTAGAACATGCCAAATGCTTACTTAAGGAAGCAGTGGTCATGCCAATTAAATACCCCAAATATTTTCGGGGTCTTCTATCTCCATGGAAAGGCATCCTCCTCTTTGGCCCTCCTGGAACGGGAAAGACCATGCTTGCAAAAGCTGTTGCAACTGAGTGCAAGACAACATTTTTCAATATTTCAGCATCATCTGTGGTGAGCAAGTGGCGAGGTGATTCGGAGAAATCCATCAAGGTCTTATTTGAGCTTGCTAGGCATCATGCACCATCTACTATATTTCTAGATGAAATTGATGCAATTATTAGTCATCGTGGTGAAGGACGCAGTGAACATGAAGCTAGTAGGCGTCTGAAAACAGAGTTGCTCATCCAGATGGATGGGTTAATGCAGACAGATGAACTAGTCTTCGTTTTGGCGGCGACGAATCTTCCCTGGGAACTGGATGCAGCCATGCTTCGTCGTTTAGAAAAGAGAGTATCCTCTTATCATTGCAAACCAGAAGCTAGAAAAGCTATGTTTGAAGAACTTCTTCCTCAATCTGGAGTTGAGGAACTTCCTTATGATATATTGATGGAAAGAACAGAAGGCTATTCATGTGCAAAGAGGCTGCTATGCAGCCACTACGCCCCCTTAATGGCTCAACTTGAGGAACAGCAAAAAGAATTGCCCGAAGAACAACAGGGAGTCGTGCCTGAAGAA

Protein sequence

MAGEDDAAAAATRWTFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAHGPELAIYEQFRLQQSGSSSAPGAVPNRNTKPLLPPLESTEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLPQSGVEELPYDILMERTEGYSCAKRLLCSHYAPLMAQLEEQQKELPEEQQGVVPEE

Homology

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BLAST of Carg19270 vs. NCBI nr
Match: XP_022925899.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucurbita moschata] >XP_023544938.1 katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617.8 bits (1592), Expect = 2.2e-173
Identity = 328/359 (91.36%), Postives = 332/359 (92.48%), Query Frame = 0


Query: 1   MAGEDDAAAAATRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MAGEDDAAAAATRWT      FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH
Sbjct: 1   MAGEDDAAAAATRWTFQDFKRFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRLQQSGSSSAPGAVPNRNT    KPLLPPLESTEMRNLAESIARDIIRGN
Sbjct: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNTVTIQKPLLPPLESTEMRNLAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEARK
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARK 300

Query: 301 AMFEELLPQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELP 344
           AMFEELLPQSGVEELPYDILMERTEGYS +  RL+C   A      LMAQLEEQQKELP
Sbjct: 301 AMFEELLPQSGVEELPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELP 359

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BLAST of Carg19270 vs. NCBI nr
Match: XP_022978398.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 617.1 bits (1590), Expect = 3.8e-173
Identity = 332/369 (89.97%), Postives = 337/369 (91.33%), Query Frame = 0


Query: 1   MAGEDDAAAAATRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MAGEDD AAAATRWT      FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH
Sbjct: 1   MAGEDD-AAAATRWTFQDFKRFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRN----TKPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRLQQSGSSSAPGAVPNRN     KPLLPPLES EMRNLAESIARDIIRGN
Sbjct: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNMVTVQKPLLPPLESAEMRNLAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWESIKGLE AKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWESIKGLEQAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEARK
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARK 300

Query: 301 AMFEELLPQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELPE 354
           AMFEEL+PQSGVEELPYDILMERTEGYS +  RL+C   A      LMAQLEEQQKELPE
Sbjct: 301 AMFEELIPQSGVEELPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPE 360

[Close]

BLAST of Carg19270 vs. NCBI nr
Match: XP_022925900.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita moschata] >XP_023544939.1 katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 611.3 bits (1575), Expect = 2.1e-171
Identity = 327/359 (91.09%), Postives = 331/359 (92.20%), Query Frame = 0


Query: 1   MAGEDDAAAAATRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MAGEDDAAAAATRWT      FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH
Sbjct: 1   MAGEDDAAAAATRWTFQDFKRFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRL QSGSSSAPGAVPNRNT    KPLLPPLESTEMRNLAESIARDIIRGN
Sbjct: 61  GPELAIYEQFRL-QSGSSSAPGAVPNRNTVTIQKPLLPPLESTEMRNLAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEARK
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARK 300

Query: 301 AMFEELLPQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELP 344
           AMFEELLPQSGVEELPYDILMERTEGYS +  RL+C   A      LMAQLEEQQKELP
Sbjct: 301 AMFEELLPQSGVEELPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELP 358

[Close]

BLAST of Carg19270 vs. NCBI nr
Match: XP_022978400.1 (katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 610.5 bits (1573), Expect = 3.5e-171
Identity = 331/369 (89.70%), Postives = 336/369 (91.06%), Query Frame = 0


Query: 1   MAGEDDAAAAATRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MAGEDD AAAATRWT      FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH
Sbjct: 1   MAGEDD-AAAATRWTFQDFKRFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRN----TKPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRL QSGSSSAPGAVPNRN     KPLLPPLES EMRNLAESIARDIIRGN
Sbjct: 61  GPELAIYEQFRL-QSGSSSAPGAVPNRNMVTVQKPLLPPLESAEMRNLAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWESIKGLE AKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWESIKGLEQAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEARK
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARK 300

Query: 301 AMFEELLPQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELPE 354
           AMFEEL+PQSGVEELPYDILMERTEGYS +  RL+C   A      LMAQLEEQQKELPE
Sbjct: 301 AMFEELIPQSGVEELPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQKELPE 360

[Close]

BLAST of Carg19270 vs. NCBI nr
Match: XP_008439631.1 (PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucumis melo])

HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161
Identity = 315/370 (85.14%), Postives = 328/370 (88.65%), Query Frame = 0


Query: 1   MAGEDDAAAAATRW------TFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MA EDD  +A TRW      TFYDSTFGRKKESKSRNGE SD+ALKNE++LGTAANGTAH
Sbjct: 1   MAAEDD--SAPTRWTFQDFKTFYDSTFGRKKESKSRNGETSDSALKNETSLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRL QS SSSAPGAV NRNT    KPLLPPLES EMRN+AESIARDIIRGN
Sbjct: 61  GPELAIYEQFRL-QSNSSSAPGAVANRNTVTIQKPLLPPLESAEMRNIAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWE+IKGLEHAK LLKEAVVMPIKYP YFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWETIKGLEHAKRLLKEAVVMPIKYPNYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEAR+
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 300

Query: 301 AMFEELL-PQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELP 354
           AMFEELL PQ G E+LPYDILMERTEGYS +  RL+C   A      LMAQLEEQQ ELP
Sbjct: 301 AMFEELLPPQPGDEDLPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQNELP 360

[Close]

BLAST of Carg19270 vs. TAIR10
Match: AT2G34560.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 391.7 bits (1005), Expect = 4.7e-109
Identity = 221/349 (63.32%), Postives = 260/349 (74.50%), Query Frame = 0


Query: 12  TRW------TFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAHGPELAIYEQFR 71
           TRW      TFYD+ FGRKK  +       D + K++   G ++NG              
Sbjct: 9   TRWSFLEFKTFYDAKFGRKKLPE------EDVSNKDQPEDG-SSNGXXXXXXXXXXXXXX 68

Query: 72  LQQSGSSSAPGAVPNRNTKPLLPPLESTEMRNLAESIARDIIRGNPDIKWESIKGLEHAK 131
              + + +    +  +  K + PP ES E R LAES++RDIIRGNP+IKWESIKGLE+AK
Sbjct: 69  XXXNTALANGNVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWESIKGLENAK 128

Query: 132 CLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSV 191
            LLKEAVVMPIKYP YF GLL+PWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASSV
Sbjct: 129 KLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSV 188

Query: 192 VSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHR-GEGRSEHEASRRLKTELLIQ 251
           VSKWRGDSEK I+VLF+LARHHAPSTIFLDEIDAIIS R GEGRSEHEASRRLKTELLIQ
Sbjct: 189 VSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQ 248

Query: 252 MDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLP-QSGVE 311
           MDGL +T+ELVFVLAATNLPWELDAAMLRRLEKR+      PEAR+ MFE L+P Q G E
Sbjct: 249 MDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDE 308

Query: 312 ELPYDILMERTEGYSCAK-RLLCSHYA--PL---MAQLEEQQKELPEEQ 347
            LP+D+L+E++EGYS +  R+LC   A  PL   +A LE+++  +PE++
Sbjct: 309 PLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDREDVVPEDE 350

[Close]

BLAST of Carg19270 vs. TAIR10
Match: AT1G80350.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 239.6 bits (610), Expect = 3.0e-63
Identity = 117/230 (50.87%), Postives = 167/230 (72.61%), Query Frame = 0


Query: 97  NLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFG 156
           +LA  + RD++   P ++W+ + GL  AK LL+EAVV+P+  P+YF+G+  PWKG+L+FG
Sbjct: 220 DLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFG 279

Query: 157 PPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDE 216
           PPGTGKT+LAKAVATEC TTFFN+S++++ SKWRG+SE+ ++ LF+LAR +APSTIF+DE
Sbjct: 280 PPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDE 339

Query: 217 IDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQT-------DELVFVLAATNLPWELDA 276
           ID++ + RG G  EHE+SRR+K+ELL+Q+DG+  T        ++V VLAATN PW++D 
Sbjct: 340 IDSLCNSRG-GSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDE 399

Query: 277 AMLRRLEKRVSSYHCKPEARKAMFE-ELLPQSGVEELPYDILMERTEGYS 319
           A+ RRLEKR+       E+RKA+    L       ++  + +  RTEGYS
Sbjct: 400 ALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYS 448

[Close]

BLAST of Carg19270 vs. TAIR10
Match: AT2G27600.1 (AAA-type ATPase family protein)

HSP 1 Score: 226.1 bits (575), Expect = 3.4e-59
Identity = 116/237 (48.95%), Postives = 162/237 (68.35%), Query Frame = 0


Query: 91  ESTEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWK 150
           E  E   L   +   I+R  P+IKW  + GLE AK  L+EAV++P+K+P++F G   PW+
Sbjct: 107 EDPEQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWR 166

Query: 151 GILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPS 210
             LL+GPPGTGK+ LAKAVATE  +TFF++S+S +VSKW G+SEK +  LFE+AR  APS
Sbjct: 167 AFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPS 226

Query: 211 TIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAA 270
            IF+DEID++   RGEG +E EASRR+KTELL+QM G+   DE V VLAATN P+ LD A
Sbjct: 227 IIFVDEIDSLCGTRGEG-NESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQA 286

Query: 271 MLRRLEKRVSSYHCKPEARKAMFEELLPQS--GVEELPYDILMERTEGYSCAKRLLC 326
           + RR +KR+     + +AR+ MF+  L  +   + E  ++ L ++TEG+S +   +C
Sbjct: 287 IRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVC 342

[Close]

BLAST of Carg19270 vs. TAIR10
Match: AT3G27120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-51
Identity = 106/224 (47.32%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 98  LAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGP 157
           L E ++ +I+  +P+++W+ I GLEHAK  + E V+ P+  P  F+G  SP KG+LLFGP
Sbjct: 181 LIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGP 240

Query: 158 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEI 217
           PGTGKTM+ KA+A E K TFF ISASS+ SKW G+ EK ++ LF +A    P+ IF+DEI
Sbjct: 241 PGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEI 300

Query: 218 DAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEK 277
           D+++S R +   EHE+SRRLKT+ LI+M+G     E + ++ ATN P ELD A  RRL K
Sbjct: 301 DSLLSQR-KSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTK 360

Query: 278 RVSSYHCKPEARKAMFEELLPQSGVEELPYD---ILMERTEGYS 319
           R+       EAR  + + LL + G+  L  D   I+   TEGYS
Sbjct: 361 RLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYS 403

[Close]

BLAST of Carg19270 vs. TAIR10
Match: AT2G45500.1 (AAA-type ATPase family protein)

HSP 1 Score: 199.1 bits (505), Expect = 4.4e-51
Identity = 112/225 (49.78%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 98  LAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGP 157
           L E I   I+  +P +KW+ + GL  AK  L E V++P K    F GL  P +G+LLFGP
Sbjct: 202 LVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGP 261

Query: 158 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEI 217
           PG GKTMLAKAVA+E + TFFN+SASS+ SKW G++EK +K LF++A    PS IF+DEI
Sbjct: 262 PGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEI 321

Query: 218 DAIISHRGEGRSEHEASRRLKTELLIQMDGLMQT-DELVFVLAATNLPWELDAAMLRRLE 277
           D+I+S R    SE+EASRRLK+E LIQ DG+    D+LV ++ ATN P ELD A+LRRL 
Sbjct: 322 DSIMSTR--STSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLRRLV 381

Query: 278 KRVSSYHCKPEARKAMFEELL---PQSGVEELPYDILMERTEGYS 319
           KR+         RK +F+  L   P S + +   D +++ TEGYS
Sbjct: 382 KRIYVPLPDSNVRKLLFKTKLKCQPHS-LSDGDIDKIVKETEGYS 423

[Close]

BLAST of Carg19270 vs. Swiss-Prot
Match: sp|A0JMA9|KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=katnal2 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.7e-80
Identity = 174/331 (52.57%), Postives = 225/331 (67.98%), Query Frame = 0


Query: 24  KKESKSRNG-----EASDAALKNESTLGTAANGTAHGPELAIYEQFRLQQS-GSSSAPGA 83
           ++ SK  NG     EAS+  L   +   T+  G        I  +  +Q +   +S   A
Sbjct: 150 RENSKQENGGNSPREASEIGLNVSAISKTSGEGGQTRRRQVIDFRSMIQDTIKGASQEIA 209

Query: 84  VPNRNTKP-----LLPPL-----ESTEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCL 143
           + + N  P     L+ P+      ++EMR LA  I+RDI   NP+++W+ I GL+ AK L
Sbjct: 210 LNSLNCNPDPSERLIKPVGAFIGGNSEMRELAAVISRDIYLQNPNVRWDDIIGLDAAKRL 269

Query: 144 LKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVS 203
           +KEAVV PI+YP+ F G+LSPWKG+LL+GPPGTGKT+LAKAVATEC TTFFNISAS++VS
Sbjct: 270 VKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVS 329

Query: 204 KWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEG-RSEHEASRRLKTELLIQMD 263
           KWRGDSEK ++VLFELAR+HAPSTIFLDE+++++S RG G   EHE SRR+KTELL+QMD
Sbjct: 330 KWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMD 389

Query: 264 GLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLP----QSGV 323
           GL ++D+LVFVLAA+NLPWELD AMLRRLEKR+       EAR+AM +  LP     SGV
Sbjct: 390 GLARSDDLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGV 449

Query: 324 E---ELPYDILMERTEGYSCAK-RLLCSHYA 330
           E   +L Y  L   T+GYS +  RL+C   A
Sbjct: 450 ELRTDLDYSTLGAETDGYSGSDIRLVCKEAA 480

[Close]

BLAST of Carg19270 vs. Swiss-Prot
Match: sp|Q8IYT4|KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL2 PE=1 SV=3)

HSP 1 Score: 296.2 bits (757), Expect = 4.8e-79
Identity = 164/287 (57.14%), Postives = 203/287 (70.73%), Query Frame = 0


Query: 86  LLPPLE-----STEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPK 145
           LL PL      ++EMR LA  ++RDI   NP+IKW  I GL+ AK L+KEAVV PI+YP+
Sbjct: 219 LLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQ 278

Query: 146 YFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVL 205
            F G+LSPWKG+LL+GPPGTGKT+LAKAVATECKTTFFNISAS++VSKWRGDSEK ++VL
Sbjct: 279 LFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVL 338

Query: 206 FELARHHAPSTIFLDEIDAIISHRGEGR-SEHEASRRLKTELLIQMDGLMQTDELVFVLA 265
           FELAR+HAPSTIFLDE+++++S RG     EHE S R+KTELL+QMDGL ++++LVFVLA
Sbjct: 339 FELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLA 398

Query: 266 ATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLPQSGVE-------ELPYDILME 325
           A+NLPWELD AMLRRLEKR+       EAR+AM    LP            EL Y +L +
Sbjct: 399 ASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQ 458

Query: 326 RTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKE---LPEEQQGVV 351
            TEGYS +  +L+C   A      +   LE  Q E   LP  Q  +V
Sbjct: 459 ETEGYSGSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLDIV 505

[Close]

BLAST of Carg19270 vs. Swiss-Prot
Match: sp|Q9D3R6|KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katnal2 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-78
Identity = 159/275 (57.82%), Postives = 199/275 (72.36%), Query Frame = 0


Query: 86  LLPPLE-----STEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPK 145
           LL PL      ++EMR LA  ++RDI   NP+IKW  I GL+ AK L+KEAVV PI+YP+
Sbjct: 220 LLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQ 279

Query: 146 YFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVL 205
            F G+LSPWKG+LL+GPPGTGKT+LAKAVATECKTTFFNISAS++VSKWRGDSEK ++VL
Sbjct: 280 LFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVL 339

Query: 206 FELARHHAPSTIFLDEIDAIISHRG-EGRSEHEASRRLKTELLIQMDGLMQTDELVFVLA 265
           FELAR+HAPSTIFLDE+++++S RG     EHE S R+KTELL+QMDGL ++++LVFVLA
Sbjct: 340 FELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLA 399

Query: 266 ATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLPQSGVE-------ELPYDILME 325
           A+NLPWELD AMLRRLEKR+       EAR+AM    LP            +L Y +L +
Sbjct: 400 ASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVLSQ 459

Query: 326 RTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKE 342
            TEGYS +  +L+C   A      + + LE  Q E
Sbjct: 460 ETEGYSGSDIKLVCREAAMRPVRKIFSVLENNQSE 494

[Close]

BLAST of Carg19270 vs. Swiss-Prot
Match: sp|O75449|KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens OX=9606 GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-63
Identity = 146/294 (49.66%), Postives = 196/294 (66.67%), Query Frame = 0


Query: 72  SSAPGAVPNRNTKPLLPPLESTEM-RNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKE 131
           + +P AV    T+P     +ST   ++L E++ RDII  NP+++W+ I  L  AK LLKE
Sbjct: 168 NKSPAAV----TEPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKE 227

Query: 132 AVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 191
           AVV+P+  P++F+G+  PWKG+L+ GPPGTGKT+LAKAVATECKTTFFN+S+S++ SK+R
Sbjct: 228 AVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYR 287

Query: 192 GDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQ 251
           G+SEK +++LFE+AR ++P+TIF+DEID+I S RG    EHEASRR+K ELL+QMDG+  
Sbjct: 288 GESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGG 347

Query: 252 TDE------LVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLPQSGVE- 311
           T E      +V VLAATN PW++D A+ RRLEKR+  Y   P A+    EELL  S  E 
Sbjct: 348 TSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRI--YIPLPSAKGR--EELLRISLREL 407

Query: 312 ELPYDI----LMERTEGYSCAKRLLCSHYAPLMAQLEEQQKELPEEQQGVVPEE 354
           EL  D+    + E  EGYS A        A LMA     +   PEE + +  EE
Sbjct: 408 ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEE 452

[Close]

BLAST of Carg19270 vs. Swiss-Prot
Match: sp|O61577|KTNA1_STRPU (Katanin p60 ATPase-containing subunit A1 OS=Strongylocentrotus purpuratus OX=7668 GN=KATNA1 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-63
Identity = 130/265 (49.06%), Postives = 184/265 (69.43%), Query Frame = 0


Query: 96  RNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLF 155
           ++L E++ RDI++ NP++ W  I GL  AK LL+EAVV+P+  P YF+G+  PWKG+L+ 
Sbjct: 214 KDLVENLERDIVQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFKGIRRPWKGVLMV 273

Query: 156 GPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLD 215
           GPPGTGKTMLAKAVATEC TTFFN+S++S+ SK+ G+SEK +++LFE+AR +APSTIF+D
Sbjct: 274 GPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFID 333

Query: 216 EIDAIISHRGEGRSEHEASRRLKTELLIQMDGLM------QTDELVFVLAATNLPWELDA 275
           EID+I S RG G SEHEASRR+K+ELLIQMDG+       ++ ++V VLAATN PW++D 
Sbjct: 334 EIDSICSKRGTG-SEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDE 393

Query: 276 AMLRRLEKRVSSYHCKPEARKAMFEELLPQSGV-EELPYDILMERTEGYSCAKRLLCSHY 335
           A+ RRLEKR+     + + R+ +    L +  + +++    + E+ +GYS A        
Sbjct: 394 ALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRD 453

Query: 336 APLMAQLEEQQKELPEEQQGVVPEE 354
           A +MA     Q   PEE + +  EE
Sbjct: 454 ASMMAMRRRIQGLRPEEIRHIPKEE 477

[Close]

BLAST of Carg19270 vs. TrEMBL
Match: tr|A0A1S3AZW4|A0A1S3AZW4_CUCME (katanin p60 ATPase-containing subunit A-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484365 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 7.5e-162
Identity = 315/370 (85.14%), Postives = 328/370 (88.65%), Query Frame = 0


Query: 1   MAGEDDAAAAATRW------TFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MA EDD  +A TRW      TFYDSTFGRKKESKSRNGE SD+ALKNE++LGTAANGTAH
Sbjct: 1   MAAEDD--SAPTRWTFQDFKTFYDSTFGRKKESKSRNGETSDSALKNETSLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRL QS SSSAPGAV NRNT    KPLLPPLES EMRN+AESIARDIIRGN
Sbjct: 61  GPELAIYEQFRL-QSNSSSAPGAVANRNTVTIQKPLLPPLESAEMRNIAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWE+IKGLEHAK LLKEAVVMPIKYP YFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWETIKGLEHAKRLLKEAVVMPIKYPNYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEAR+
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 300

Query: 301 AMFEELL-PQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELP 354
           AMFEELL PQ G E+LPYDILMERTEGYS +  RL+C   A      LMAQLEEQQ ELP
Sbjct: 301 AMFEELLPPQPGDEDLPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQNELP 360

[Close]

BLAST of Carg19270 vs. TrEMBL
Match: tr|A0A1S3AZU5|A0A1S3AZU5_CUCME (katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484365 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 2.4e-160
Identity = 315/383 (82.25%), Postives = 328/383 (85.64%), Query Frame = 0


Query: 1   MAGEDDAAAAATRW-------------------TFYDSTFGRKKESKSRNGEASDAALKN 60
           MA EDD  +A TRW                   TFYDSTFGRKKESKSRNGE SD+ALKN
Sbjct: 1   MAAEDD--SAPTRWTFQALLTFLFNCFCFLDFKTFYDSTFGRKKESKSRNGETSDSALKN 60

Query: 61  ESTLGTAANGTAHGPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRN 120
           E++LGTAANGTAHGPELAIYEQFRL QS SSSAPGAV NRNT    KPLLPPLES EMRN
Sbjct: 61  ETSLGTAANGTAHGPELAIYEQFRL-QSNSSSAPGAVANRNTVTIQKPLLPPLESAEMRN 120

Query: 121 LAESIARDIIRGNPDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGP 180
           +AESIARDIIRGNPDIKWE+IKGLEHAK LLKEAVVMPIKYP YFRGLLSPWKGILLFGP
Sbjct: 121 IAESIARDIIRGNPDIKWETIKGLEHAKRLLKEAVVMPIKYPNYFRGLLSPWKGILLFGP 180

Query: 181 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEI 240
           PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEI
Sbjct: 181 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEI 240

Query: 241 DAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEK 300
           DAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEK
Sbjct: 241 DAIISHRGEGRSEHEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEK 300

Query: 301 RVSSYHCKPEARKAMFEELL-PQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----P 354
           R+     +PEAR+AMFEELL PQ G E+LPYDILMERTEGYS +  RL+C   A      
Sbjct: 301 RILVPLPEPEARRAMFEELLPPQPGDEDLPYDILMERTEGYSGSDIRLVCKEAAMQPLRR 360

[Close]

BLAST of Carg19270 vs. TrEMBL
Match: tr|A0A1S3AYT2|A0A1S3AYT2_CUCME (katanin p60 ATPase-containing subunit A-like 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484365 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.2e-159
Identity = 306/350 (87.43%), Postives = 318/350 (90.86%), Query Frame = 0


Query: 15  TFYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAHGPELAIYEQFRLQQSGSSSA 74
           TFYDSTFGRKKESKSRNGE SD+ALKNE++LGTAANGTAHGPELAIYEQFRL QS SSSA
Sbjct: 11  TFYDSTFGRKKESKSRNGETSDSALKNETSLGTAANGTAHGPELAIYEQFRL-QSNSSSA 70

Query: 75  PGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGNPDIKWESIKGLEHAKCLLKE 134
           PGAV NRNT    KPLLPPLES EMRN+AESIARDIIRGNPDIKWE+IKGLEHAK LLKE
Sbjct: 71  PGAVANRNTVTIQKPLLPPLESAEMRNIAESIARDIIRGNPDIKWETIKGLEHAKRLLKE 130

Query: 135 AVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 194
           AVVMPIKYP YFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR
Sbjct: 131 AVVMPIKYPNYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 190

Query: 195 GDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQ 254
           GDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQ
Sbjct: 191 GDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLKTELLIQMDGLMQ 250

Query: 255 TDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELL-PQSGVEELPYDI 314
           TDELVFVLAATNLPWELDAAMLRRLEKR+     +PEAR+AMFEELL PQ G E+LPYDI
Sbjct: 251 TDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPPQPGDEDLPYDI 310

Query: 315 LMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELPEEQQGVVPEE 354
           LMERTEGYS +  RL+C   A      LMAQLEEQQ ELPE+QQGVVPEE
Sbjct: 311 LMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQNELPEDQQGVVPEE 359

[Close]

BLAST of Carg19270 vs. TrEMBL
Match: tr|A0A0A0KKN3|A0A0A0KKN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523400 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 1.6e-159
Identity = 311/370 (84.05%), Postives = 327/370 (88.38%), Query Frame = 0


Query: 1   MAGEDDAAAAATRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAH 60
           MA +D   +A+TRWT      FYDSTFGRKKESKSR GE S++ALKNE++LGTAANGTAH
Sbjct: 1   MAAQD--YSASTRWTFQDFKRFYDSTFGRKKESKSREGETSNSALKNETSLGTAANGTAH 60

Query: 61  GPELAIYEQFRLQQSGSSSAPGAVPNRNT----KPLLPPLESTEMRNLAESIARDIIRGN 120
           GPELAIYEQFRL QS SSSAPGAV NRNT    KPLLPPLES EMRN+AESIARDIIRGN
Sbjct: 61  GPELAIYEQFRL-QSNSSSAPGAVANRNTVTIQKPLLPPLESAEMRNIAESIARDIIRGN 120

Query: 121 PDIKWESIKGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180
           PDIKWE+IKGLEHAK LLKEAVVMPIKYP YFRGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 121 PDIKWETIKGLEHAKHLLKEAVVMPIKYPSYFRGLLSPWKGILLFGPPGTGKTMLAKAVA 180

Query: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240
           TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE
Sbjct: 181 TECKTTFFNISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSE 240

Query: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARK 300
           HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKR+     +PEAR+
Sbjct: 241 HEASRRLKTELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 300

Query: 301 AMFEELL-PQSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELP 354
           AMFEELL PQ G E+LPYDILMERTEGYS +  RL+C   A      LMAQLEEQQ ELP
Sbjct: 301 AMFEELLPPQPGDEDLPYDILMERTEGYSGSDIRLVCKEAAMQPLRRLMAQLEEQQNELP 360

[Close]

BLAST of Carg19270 vs. TrEMBL
Match: tr|A0A1Q3CGR4|A0A1Q3CGR4_CEPFO (AAA domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22909 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.9e-125
Identity = 245/355 (69.01%), Postives = 285/355 (80.28%), Query Frame = 0


Query: 12  TRWT------FYDSTFGRKKESKSRNGEASDAALKNESTLGTAANGTAHG---PELAIYE 71
           TRWT      FYD  FGRKK ++S+NG++++  + N ST   ++NG  +     ++AIYE
Sbjct: 8   TRWTFQDFKMFYDDKFGRKKVAESQNGQSAENGVSNGSTSNVSSNGNGNAKNMSDMAIYE 67

Query: 72  QFRLQQSGSSSAPGAVPNRN----TKPLLPPLESTEMRNLAESIARDIIRGNPDIKWESI 131
           Q+R+Q +    + G + N       K LLPP ES +MR L ES++RDIIRG+PD+KWES+
Sbjct: 68  QYRIQGTRPMQSNGILSNGTLETPQKSLLPPFESADMRALGESLSRDIIRGSPDVKWESV 127

Query: 132 KGLEHAKCLLKEAVVMPIKYPKYFRGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 191
           KGLE+AK LLKEAVVMPIKYPKYF GLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF
Sbjct: 128 KGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 187

Query: 192 NISASSVVSKWRGDSEKSIKVLFELARHHAPSTIFLDEIDAIISHRGEGRSEHEASRRLK 251
           NISASSVVSKWRGDSEK +KVLFELARHHAPSTIF+DEIDAIISHRGEGRSEHEASRRLK
Sbjct: 188 NISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFIDEIDAIISHRGEGRSEHEASRRLK 247

Query: 252 TELLIQMDGLMQTDELVFVLAATNLPWELDAAMLRRLEKRVSSYHCKPEARKAMFEELLP 311
           TELLIQMDGLM+TDELVFVLAATNLPWELDAAMLRRLEKR+     +PEAR+AMFEELLP
Sbjct: 248 TELLIQMDGLMRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLP 307

Query: 312 -QSGVEELPYDILMERTEGYSCAK-RLLCSHYA-----PLMAQLEEQQKELPEEQ 347
            Q   EELPYDIL++RTEGYS +  RLLC   A      LM  LE++Q+ +PE++
Sbjct: 308 SQPDEEELPYDILVDRTEGYSGSDIRLLCKETAMQPLRRLMVHLEDKQEVVPEDE 362

The following BLAST results are available for this feature:

BLAST of Carg19270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925899.1	2.2e-173	91.36	katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucurbita moschata] >...	[more]
XP_022978398.1	3.8e-173	89.97	katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Cucurbita maxima]	[more]
XP_022925900.1	2.1e-171	91.09	katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita moschata] >...	[more]
XP_022978400.1	3.5e-171	89.70	katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita maxima]	[more]
XP_008439631.1	1.1e-161	85.14	PREDICTED: katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucumis me...	[more]

BLAST of Carg19270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34560.2	4.7e-109	63.32	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G80350.1	3.0e-63	50.87	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G27600.1	3.4e-59	48.95	AAA-type ATPase family protein	[more]
AT3G27120.1	1.2e-51	47.32	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G45500.1	4.4e-51	49.78	AAA-type ATPase family protein	[more]

BLAST of Carg19270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A0JMA9\|KATL2_XENTR	5.7e-80	52.57	Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis OX=8364 GN=...	[more]
sp\|Q8IYT4\|KATL2_HUMAN	4.8e-79	57.14	Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens OX=9606 GN=KATNAL...	[more]
sp\|Q9D3R6\|KATL2_MOUSE	1.4e-78	57.82	Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus OX=10090 GN=Katna...	[more]
sp\|O75449\|KTNA1_HUMAN	1.7e-63	49.66	Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens OX=9606 GN=KATNA1 PE=1 ...	[more]
sp\|O61577\|KTNA1_STRPU	2.2e-63	49.06	Katanin p60 ATPase-containing subunit A1 OS=Strongylocentrotus purpuratus OX=766...	[more]

BLAST of Carg19270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZW4\|A0A1S3AZW4_CUCME	7.5e-162	85.14	katanin p60 ATPase-containing subunit A-like 2 isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S3AZU5\|A0A1S3AZU5_CUCME	2.4e-160	82.25	katanin p60 ATPase-containing subunit A-like 2 isoform X1 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S3AYT2\|A0A1S3AYT2_CUCME	1.2e-159	87.43	katanin p60 ATPase-containing subunit A-like 2 isoform X3 OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0KKN3\|A0A0A0KKN3_CUCSA	1.6e-159	84.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523400 PE=4 SV=1	[more]
tr\|A0A1Q3CGR4\|A0A1Q3CGR4_CEPFO	1.9e-125	69.01	AAA domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2290...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003959	ATPase_AAA_core
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19270-RA	Carg19270-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 148..285 e-value: 6.2E-16 score: 68.9
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 152..279 e-value: 3.6E-38 score: 130.9
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 284..329 e-value: 2.5E-84 score: 284.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 110..283 e-value: 2.5E-84 score: 284.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..89
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 15..329
None	No IPR available	PANTHER	PTHR23074:SF92	SUBFAMILY NOT NAMED	coord: 15..329
None	No IPR available	CDD	cd00009	AAA	coord: 146..279 e-value: 5.50501E-24 score: 94.9055
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 111..344

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19270	Cla009775	Watermelon (97103) v1	carwmB0292
Carg19270	Csa6G523400	Cucumber (Chinese Long) v2	carcuB0326
Carg19270	MELO3C007131	Melon (DHL92) v3.5.1	carmeB0301
Carg19270	ClCG01G024640	Watermelon (Charleston Gray)	carwcgB0292
Carg19270	CSPI06G36300	Wild cucumber (PI 183967)	carcpiB0332
Carg19270	Cucsa.047750	Cucumber (Gy14) v1	carcgyB0350
Carg19270	CmaCh03G014000	Cucurbita maxima (Rimu)	carcmaB0413
Carg19270	CmoCh03G013930	Cucurbita moschata (Rifu)	carcmoB0408
Carg19270	Lsi01G001440	Bottle gourd (USVL1VR-Ls)	carlsiB273
Carg19270	Cp4.1LG10g05960	Cucurbita pepo (Zucchini)	carcpeB0413
Carg19270	CsGy6G035660	Cucumber (Gy14) v2	carcgybB0312
Carg19270	MELO3C007131.2	Melon (DHL92) v3.6.1	carmedB0312
Carg19270	Cla97C01G024590	Watermelon (97103) v2	carwmbB0307
Carg19270	Bhi03G000077	Wax gourd	carwgoB0385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19270	Silver-seed gourd	carcarB327
Carg19270	Silver-seed gourd	carcarB328
Carg19270	Cucurbita maxima (Rimu)	carcmaB0415
Carg19270	Cucurbita maxima (Rimu)	carcmaB0411
Carg19270	Cucurbita maxima (Rimu)	carcmaB0412
Carg19270	Cucurbita moschata (Rifu)	carcmoB0406
Carg19270	Cucurbita moschata (Rifu)	carcmoB0407
Carg19270	Cucurbita moschata (Rifu)	carcmoB0410
Carg19270	Cucurbita pepo (Zucchini)	carcpeB0412
Carg19270	Cucurbita pepo (Zucchini)	carcpeB0415
Carg19270	Cucurbita pepo (Zucchini)	carcpeB0416
Carg19270	Cucumber (Chinese Long) v3	carcucB0332
Carg19270	Bottle gourd (USVL1VR-Ls)	carlsiB274
Carg19270	Melon (DHL92) v3.5.1	carmeB0300
Carg19270	Melon (DHL92) v3.6.1	carmedB0311
Carg19270	Watermelon (Charleston Gray)	carwcgB0293
Carg19270	Watermelon (97103) v1	carwmB0291
Carg19270	Watermelon (97103) v2	carwmbB0309
Carg19270	Wax gourd	carwgoB0386