Carg19252 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACTCTCAGCCGCAGGATTCATCGTCATCATACAAATTCCGGCCACCGGGTTTTTCTCTCTCTGTCTCTCTCTTTGATTGTTTGTTGTTGTTCCGGCCATGGACCGCCGTGTTCGTACGAACCCATTTGTCTCAGAGCAAGAAGATCCAGAAGCCACGTCGGACGACGGCCTACCGGAGTCACCCTCCGACGATAATGATTCAAAACCCGCCGCCGGCCCCCCTCCCAAAAAGAGGTCAGTTTGAATTTTTATTTTTATTTTTAATAATCATAATTTTGAGTTGTAATTTGATTGTTTGTGCTGTTTGGGGGTTTTGTTGTATACAGTAGAAGGGGAGTTCAGAAGAGAGTAGTGTCCGTACCGATCGGCGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGTACACCAATAGATTATACAAACTCGAGGGGCATTTTCGGTAATTCTGGGGTTTTTTTTGGATGATTAATATCTATTTATTTCATTAATTAAGTTCTAGTCGTAGATGGAATTGCATTTATTTTGGTGCATTTCGATATTAATTTGAGCTCATTTAATTGAGTAGTTGAAAAAATGGTTGAGATTTCAATTCTAGACTTTGTTGGCCGCCGCCGCCGCCGGCTGCCGGCCGGCTACTATGGGATCTGGATAGAGATTGGCGCATTTTAGCTTAAAGGCGGCTTTTGCTATTAAGCGCTTGATTTTTTTTATTTGTCTAGTTGGGAATTGGGATCATACTCATTATCCAATCGCTCTCACAGTAGCGTGTAAAACACGCTCACTTTCTTCACTTTTTTTTTTTTTTTTCTTTTTCTTTTACCTAATTATTGCCCTAATTACGCCGAATTCAATCTGGCGTGTATTAAAAATATTTTTTTTATAAAATAGTCTTCAAATTTTAATTATTGCTCTATTTATTTTCTTATTTACCTAATTATTGCACGGTTTTTAATTATTTCTGAAATTGAATATTTTAAACGGTCTTTGAATTTTAATTAATTTTCTACAAACGGAAATTACGACATTTTCCAAGGTGCCTTTCACATCGAAGGCATACTGAAATTTCTTTGGATAAAATATTACTTAATTGCTTTTTTTAGGAAAAAAAAACATATTATTGTTTTTGGTCGGCATATATAAATCAAATTGTCAAATTGTTTGAGTCAAAAAAAGAAAAAAAAGTCAAAATTTCATATTTATTCCCGTTTTAATATAAATTTAAATAAGTTAATTTTTTTTAATGAAAGTTTAAATTTTTTTTTAATTTTATATTTCTTAGCTTCGTTATTGGCCATTGATTTTTTATTTTATTTTTGGAATATTTATATTAATCTCACGTTTTTTTTTTAATTATTGTTTATATATATTTTTTATTATAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCCAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTCCCGGCCACCAAATCTCACCACCACCACCACAATTCCTCGCCGTCCTCCGCCGCGATCGCCGCTGCGCCCGACTCCTCATCCCCGGGAAGCACGACGACGTCCTCGTCAACTTCCTCCGGCGACCATACGAACACCGATCCCTCATTGTCGGCAGCGGCGAAATTCGAGGAGGCGGCTGCGGTTTTCGCGAGTCAGCCAGAACTAGAACTCGGCGGCGACTCGCTGATGATAAAACCATGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCATACGATAGAATCCTGGAGGGCCCAATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAAATGACGAGGACGAATCGTTATTTGCTGACCTTGGGGAGTTACCTGAAGGCTCTATGGTTTTTGGGCGACGGCGAGCGGTCCAACCGGACGGACCGAACCGGACACGTGGCAGAGTATTAGACTGCTAG TACTCTCAGCCGCAGGATTCATCGTCATCATACAAATTCCGGCCACCGGGTTTTTCTCTCTCTGTCTCTCTCTTTGATTGTTTGTTGTTGTTCCGGCCATGGACCGCCGTGTTCGTACGAACCCATTTGTCTCAGAGCAAGAAGATCCAGAAGCCACGTCGGACGACGGCCTACCGGAGTCACCCTCCGACGATAATGATTCAAAACCCGCCGCCGGCCCCCCTCCCAAAAAGAGTAGAAGGGGAGTTCAGAAGAGAGTAGTGTCCGTACCGATCGGCGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCCAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTCCCGGCCACCAAATCTCACCACCACCACCACAATTCCTCGCCGTCCTCCGCCGCGATCGCCGCTGCGCCCGACTCCTCATCCCCGGGAAGCACGACGACGTCCTCGTCAACTTCCTCCGGCGACCATACGAACACCGATCCCTCATTGTCGGCAGCGGCGAAATTCGAGGAGGCGGCTGCGGTTTTCGCGAGTCAGCCAGAACTAGAACTCGGCGGCGACTCGCTGATGATAAAACCATGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCATACGATAGAATCCTGGAGGGCCCAATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAAATGACGAGGACGAATCGTTATTTGCTGACCTTGGGGAGTTACCTGAAGGCTCTATGGTTTTTGGGCGACGGCGAGCGGTCCAACCGGACGGACCGAACCGGACACGTGGCAGAGTATTAGACTGCTAG ATGGACCGCCGTGTTCGTACGAACCCATTTGTCTCAGAGCAAGAAGATCCAGAAGCCACGTCGGACGACGGCCTACCGGAGTCACCCTCCGACGATAATGATTCAAAACCCGCCGCCGGCCCCCCTCCCAAAAAGAGTAGAAGGGGAGTTCAGAAGAGAGTAGTGTCCGTACCGATCGGCGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCCAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTCCCGGCCACCAAATCTCACCACCACCACCACAATTCCTCGCCGTCCTCCGCCGCGATCGCCGCTGCGCCCGACTCCTCATCCCCGGGAAGCACGACGACGTCCTCGTCAACTTCCTCCGGCGACCATACGAACACCGATCCCTCATTGTCGGCAGCGGCGAAATTCGAGGAGGCGGCTGCGGTTTTCGCGAGTCAGCCAGAACTAGAACTCGGCGGCGACTCGCTGATGATAAAACCATGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCATACGATAGAATCCTGGAGGGCCCAATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAAATGACGAGGACGAATCGTTATTTGCTGACCTTGGGGAGTTACCTGAAGGCTCTATGGTTTTTGGGCGACGGCGAGCGGTCCAACCGGACGGACCGAACCGGACACGTGGCAGAGTATTAGACTGCTAG MDRRVRTNPFVSEQEDPEATSDDGLPESPSDDNDSKPAAGPPPKKSRRGVQKRVVSVPIGDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPATKSHHHHHNSSPSSAAIAAAPDSSSPGSTTTSSSTSSGDHTNTDPSLSAAAKFEEAAAVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPICGGGDIFDDADVMVLSTRGNDEDESLFADLGELPEGSMVFGRRRAVQPDGPNRTRGRVLDC
BLAST of Carg19252 vs. NCBI nr
Match: XP_022952059.1 (probable WRKY transcription factor 69 isoform X1 [Cucurbita moschata]) HSP 1 Score: 460.3 bits (1183), Expect = 4.9e-126 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Carg19252 vs. NCBI nr
Match: XP_022969193.1 (probable WRKY transcription factor 69 isoform X1 [Cucurbita maxima]) HSP 1 Score: 451.1 bits (1159), Expect = 3.0e-123 Identity = 282/295 (95.59%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Carg19252 vs. NCBI nr
Match: XP_022952060.1 (probable WRKY transcription factor 69 isoform X2 [Cucurbita moschata]) HSP 1 Score: 447.2 bits (1149), Expect = 4.3e-122 Identity = 291/295 (98.64%), Postives = 291/295 (98.64%), Query Frame = 0
BLAST of Carg19252 vs. NCBI nr
Match: AQX45437.1 (WRKY transcription factor 1-like protein [Luffa aegyptiaca]) HSP 1 Score: 441.0 bits (1133), Expect = 3.1e-120 Identity = 272/299 (90.97%), Postives = 277/299 (92.64%), Query Frame = 0
BLAST of Carg19252 vs. NCBI nr
Match: XP_022969194.1 (probable WRKY transcription factor 69 isoform X2 [Cucurbita maxima]) HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-119 Identity = 278/295 (94.24%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Carg19252 vs. TAIR10
Match: AT3G58710.1 (WRKY DNA-binding protein 69) HSP 1 Score: 186.4 bits (472), Expect = 2.5e-47 Identity = 155/270 (57.41%), Postives = 175/270 (64.81%), Query Frame = 0
BLAST of Carg19252 vs. TAIR10
Match: AT1G29280.1 (WRKY DNA-binding protein 65) HSP 1 Score: 148.3 bits (373), Expect = 7.5e-36 Identity = 144/273 (52.75%), Postives = 167/273 (61.17%), Query Frame = 0
BLAST of Carg19252 vs. TAIR10
Match: AT2G34830.1 (WRKY DNA-binding protein 35) HSP 1 Score: 128.3 bits (321), Expect = 8.1e-30 Identity = 61/92 (66.30%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Carg19252 vs. TAIR10
Match: AT1G30650.1 (WRKY DNA-binding protein 14) HSP 1 Score: 125.9 bits (315), Expect = 4.0e-29 Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Carg19252 vs. TAIR10
Match: AT4G23550.1 (WRKY family transcription factor) HSP 1 Score: 108.2 bits (269), Expect = 8.6e-24 Identity = 54/93 (58.06%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Carg19252 vs. Swiss-Prot
Match: sp|Q93WV5|WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana OX=3702 GN=WRKY69 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45 Identity = 154/270 (57.04%), Postives = 174/270 (64.44%), Query Frame = 0
BLAST of Carg19252 vs. Swiss-Prot
Match: sp|Q9LP56|WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana OX=3702 GN=WRKY65 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34 Identity = 144/273 (52.75%), Postives = 167/273 (61.17%), Query Frame = 0
BLAST of Carg19252 vs. Swiss-Prot
Match: sp|O64747|WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana OX=3702 GN=WRKY35 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28 Identity = 61/92 (66.30%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Carg19252 vs. Swiss-Prot
Match: sp|Q9SA80|WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=WRKY14 PE=2 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 7.2e-28 Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Carg19252 vs. Swiss-Prot
Match: sp|O04609|WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=WRKY22 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-22 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Carg19252 vs. TrEMBL
Match: tr|A0A1S6YJF1|A0A1S6YJF1_LUFAE (WRKY transcription factor 1-like protein OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-120 Identity = 272/299 (90.97%), Postives = 277/299 (92.64%), Query Frame = 0
BLAST of Carg19252 vs. TrEMBL
Match: tr|A0A1S3C0Q3|A0A1S3C0Q3_CUCME (probable WRKY transcription factor 69 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495493 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 1.5e-115 Identity = 264/297 (88.89%), Postives = 270/297 (90.91%), Query Frame = 0
BLAST of Carg19252 vs. TrEMBL
Match: tr|A0A1S3C0K9|A0A1S3C0K9_CUCME (probable WRKY transcription factor 69 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495493 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 8.3e-114 Identity = 263/297 (88.55%), Postives = 269/297 (90.57%), Query Frame = 0
BLAST of Carg19252 vs. TrEMBL
Match: tr|E7CEY2|E7CEY2_CUCSA (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY47 PE=2 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 8.6e-111 Identity = 258/298 (86.58%), Postives = 265/298 (88.93%), Query Frame = 0
BLAST of Carg19252 vs. TrEMBL
Match: tr|A0A251PYL6|A0A251PYL6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G113300 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.5e-58 Identity = 141/285 (49.47%), Postives = 166/285 (58.25%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|