Carg19236 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19236
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_099 : 384322 .. 385057 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTGAGATTCCATCTCTTTTTCTTGTGTTCTTGGATTATGGGTCATTTTTTTCCTTTCTGAATCGAGTTTTTTTGTTGTTGTTCTTGAGGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGGTAACTCTCAAAACAGGGGACCCTTTTCTTCTTCCACTCTGTTTCGATGGCTAATTTGACGCTATTTTTGAAGTAGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAACACAAACCACACACAATTTTCAACTTGGTCTGTCTTTAGGCCATGTTTTGTAAAAGGGTTAGCCCTTTTCGAGCTTTTTC

mRNA sequence

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAACACAAACCACACACAATTTTCAACTTGGTCTGTCTTTAGGCCATGTTTTGTAAAAGGGTTAGCCCTTTTCGAGCTTTTTC

Coding sequence (CDS)

ATGGGCAAGCCCAAGAGAATTTGCTTGCTTCTATTAAGGCTTCTTGCTTTGGGCTCGACTCTTTCAGCTGCCATTGTTATGGCCGCAAGTCATGAAGAAGCCAGGTTTTTTAGCCTGTCTTTTGAAGCCAAATACACTCATACACCAGCCTTCAAGTACTTTGTGATTGCAAATGCTATTGCGAGTGTTTATGGGTTTTTCGTGCTGTTTCTTCCGGCGGAGAGCTTGCTCTGGCGATTAGTGCTCTGTTTCGATGCGATATTGACGATGCTGCTGACTTCGAGCATCGCGGCGGCGTTGGCGGTGGCGCAAATAGGAAAGAATGGGAATTCATACGCCGGATGGCTTCCAATATGCGACCAAGTGGCAAGTTATTGTAGGCAAGTCAGTGGAGCTCTGGCTTTAGGCCTCCTTGGACTCCTTGTTTACCTCTTGCTTCTTCTCTATTCTCTTCACTCTCTTTTGGACCCTCTTCTTTTGAAAAAGACTTAA

Protein sequence

MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVASYCRQVSGALALGLLGLLVYLLLLLYSLHSLLDPLLLKKT

Homology

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BLAST of Carg19236 vs. NCBI nr
Match: XP_023554623.1 (LOW QUALITY PROTEIN: CASP-like protein 1C1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 3.4e-68
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 30  MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 89

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 90  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 149

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT
Sbjct: 150 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 192

[Close]

BLAST of Carg19236 vs. NCBI nr
Match: XP_022969278.1 (CASP-like protein 1C1 [Cucurbita maxima])

HSP 1 Score: 265.8 bits (678), Expect = 9.8e-68
Identity = 145/163 (88.96%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFD ILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDVILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QVASYCRQVSGALALGL                 LDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Carg19236 vs. NCBI nr
Match: XP_022952801.1 (CASP-like protein 1C1 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 144/163 (88.34%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGKPKRICLLLLRLLALGSTLSAA+VMAAS EEARFFSLSFEAKYTHTPAFKYFVIANAI
Sbjct: 1   MGKPKRICLLLLRLLALGSTLSAAVVMAASREEARFFSLSFEAKYTHTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QVASYCRQVSGALALGL                 LDPLLLKKT
Sbjct: 121 QVASYCRQVSGALALGLLGLLVYFLLLLYSLHSLLDPLLLKKT 163

[Close]

BLAST of Carg19236 vs. NCBI nr
Match: XP_008455324.1 (PREDICTED: CASP-like protein 1C1 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 146/162 (90.12%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSS+AAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSVAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKK 163
           QVA+YC QV+GAL +GLXXXXXXXXXXXXXXXXXLDPLLLKK
Sbjct: 121 QVANYCSQVTGALVMGLXXXXXXXXXXXXXXXXXLDPLLLKK 162

[Close]

BLAST of Carg19236 vs. NCBI nr
Match: XP_004137023.1 (PREDICTED: CASP-like protein 1C1 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 144/162 (88.89%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 2   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 61

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSSIAAALAVAQIGK+GNSYAGWLPICD
Sbjct: 62  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKDGNSYAGWLPICD 121

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKK 163
           QVA+YC QV+GAL +GL XXXXXXXXXXXXXXX LDPLLLKK
Sbjct: 122 QVANYCSQVTGALVMGLLXXXXXXXXXXXXXXXLLDPLLLKK 163

[Close]

BLAST of Carg19236 vs. TAIR10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-39
Identity = 88/159 (55.35%), Postives = 108/159 (67.92%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           KRI  L+LRL A G+ L+A IVM  S E A F ++S EAKYT   AFKYFVIANA+ SVY
Sbjct: 6   KRIGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPK 125

Query: 125 YCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           +C Q++GAL  G                  +DP LL+K+
Sbjct: 126 FCDQITGALIAGFVALVLYVLLLLYSLHAVVDPFLLQKS 164

[Close]

BLAST of Carg19236 vs. TAIR10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 144.8 bits (364), Expect = 4.6e-35
Identity = 81/159 (50.94%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           +R+  L+LR  A  + L A I M  S E + FF +S  AKY+   AFKYFVIANAI +VY
Sbjct: 6   QRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AA+AVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPR 125

Query: 125 YCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           +C Q++GAL  GL                 +DP LL+K+
Sbjct: 126 FCDQITGALIAGLVALVLYVFLLIFSIHHVVDPFLLRKS 164

[Close]

BLAST of Carg19236 vs. TAIR10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 2   GKPKRICLLLLRLLALGSTLSAAIVMAASHEEARF---------FSLSFEAKYTHTPAFK 61
           GK  +I LL LRLLA  +TLSAAIVM  + E   F            +F AK+ HTPAF 
Sbjct: 13  GKSCKI-LLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFV 72

Query: 62  YFVIANAIASVYGFFVLFL-----PAESLLWRL--VLCFDAILTMLLTSSIAAALAVAQI 121
           +FV+ANA+ S +   ++ L       E   +RL  V   D +   L++++  AA  +A++
Sbjct: 73  FFVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEV 132

Query: 122 GKNGNSYAGWLPICDQVASYCRQVSGAL 134
           GKNGN +A W  ICD+ A+YC   +GAL
Sbjct: 133 GKNGNKHARWDKICDRFATYCDHGAGAL 159

[Close]

BLAST of Carg19236 vs. TAIR10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 5   KRICLL--LLRLLALGSTLSAAIVMAASHEEARFFS--LSFEAKYTHTPAFKYFVIANAI 64
           +RI +L  +LR++A  +T+ +AI+M  +HE   FF+  + F+A+Y   PA  +FV+ANA+
Sbjct: 23  RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAV 82

Query: 65  ASVYGFFVLFLPAESLLWR-------LVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYA 124
            S Y    L L    ++ R       L++  D  +  LLTS  ++A A+  +  NGN+  
Sbjct: 83  VSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query: 125 GWLPICDQVASYCRQVSGAL 134
            W  IC Q  S+C ++SG+L
Sbjct: 143 NWFAICQQFNSFCERISGSL 162

[Close]

BLAST of Carg19236 vs. TAIR10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-14
Identity = 54/134 (40.30%), Postives = 74/134 (55.22%), Query Frame = 0


Query: 11  LLRLLALGSTLSAAIVMAASHEEARFFS--LSFEAKYTHTPAFKYFVIANAIASVYGFFV 70
           LLRL A+  T+ AA VM  + E   FF+  L F+A Y   PAF+YFVI  A+A V  + V
Sbjct: 51  LLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVI--AVAVVASYLV 110

Query: 71  LFLP--------AESLLWRLVLCF-DAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPIC 130
           L LP          ++  RL+L   D ++  L TS+ AAA ++  +  NGN    WLPIC
Sbjct: 111 LSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPIC 170

Query: 131 DQVASYCRQVSGAL 134
            Q   +C+ VS A+
Sbjct: 171 QQFGDFCQNVSTAV 182

[Close]

BLAST of Carg19236 vs. Swiss-Prot
Match: sp|B9N2D0|CSPLK_POPTR (CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 100/161 (62.11%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M KPKR+  LLLRL+A+G+TL+A I+MA SHE+  FF++S+EAKYT TPAFKYFVIANAI
Sbjct: 1   MMKPKRLLSLLLRLIAVGATLAAVIIMATSHEKGTFFAVSYEAKYTDTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGF VLF P  S LWRLVL  D + TMLL SSI+AALAVAQ+GKNGNS AGWLP+C 
Sbjct: 61  VTVYGFLVLFHPPGSPLWRLVLALDLVFTMLLISSISAALAVAQVGKNGNSRAGWLPVCG 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLK 162
           QV  YC QV+GAL  GL                 L+PLL K
Sbjct: 121 QVTKYCNQVTGALVAGLIALITYIILLLHSIYTFLNPLLEK 161

[Close]

BLAST of Carg19236 vs. Swiss-Prot
Match: sp|B9N5U6|CSPL4_POPTR (CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 8.0e-45
Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M KPKR+  LLLRL+A G+TL+A I+MA SHE+  FF+LS+EAKY+ TPAFKYFVIANAI
Sbjct: 1   MVKPKRLLSLLLRLIAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VYGF  LF+P+ES LWRLVL  D + TMLL SSI+AALAVAQ+GK GNS AGWLP+C 
Sbjct: 61  VTVYGFLALFIPSESPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCG 120

Query: 121 QVASYCRQVSGALALG 137
           QV  YC QV+GAL  G
Sbjct: 121 QVTKYCNQVTGALVAG 136

[Close]

BLAST of Carg19236 vs. Swiss-Prot
Match: sp|B9RW00|CSPL6_RICCO (CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-44
Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M K KR+  LLLRL+A G+ L AAIVMA SHE   FF++S+EAKY+ TPAFKYFVI NAI
Sbjct: 1   MAKAKRVFTLLLRLIAFGTALVAAIVMATSHESGSFFTVSYEAKYSDTPAFKYFVIVNAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            +VY F  LFLP+ESLLWRLV+  D + TML+TSSI+AA+AVAQ+GK GNS+AGWLPIC 
Sbjct: 61  VTVYSFLALFLPSESLLWRLVIVTDVVFTMLVTSSISAAVAVAQVGKKGNSHAGWLPICG 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QV  +C QV+GALA                    L+PLLL+KT
Sbjct: 121 QVPKFCDQVTGALAAAFISLITYAILLLYSIHTVLNPLLLQKT 163

[Close]

BLAST of Carg19236 vs. Swiss-Prot
Match: sp|A7PJ32|CSPL2_VITVI (CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.8e-43
Identity = 89/131 (67.94%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 6   RICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVYG 65
           RIC L+LRLLA G+TLSAAIVMA SHE   + SLS EAKY+HTPAFKYFVIANAI S Y 
Sbjct: 7   RICFLVLRLLAFGATLSAAIVMATSHERTTYLSLSIEAKYSHTPAFKYFVIANAIGSAYS 66

Query: 66  FFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVASY 125
             +LFLP+   LW LV+  D ++TM LTSSI+AAL++A +GK GNSYAGWLPICDQV +Y
Sbjct: 67  LLLLFLPSHGSLWPLVIASDVVITMFLTSSISAALSIAYVGKKGNSYAGWLPICDQVPNY 126

Query: 126 CRQVSGALALG 137
           C  V+GALA G
Sbjct: 127 CNHVTGALAAG 137

[Close]

BLAST of Carg19236 vs. Swiss-Prot
Match: sp|D7M2M8|CSPLF_ARALL (CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_327471 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.6e-39
Identity = 89/159 (55.97%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 5   KRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAIASVY 64
           KRI  L+LRL A G+ L+A IVM  S E A FF++S EAKYT   AFKYFVIANA+ SVY
Sbjct: 6   KRIGGLVLRLAAFGAALAALIVMITSRERASFFAVSLEAKYTDMAAFKYFVIANAVVSVY 65

Query: 65  GFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICDQVAS 124
            F VLFLP ESLLW+ V+  D ++TMLLTSS++AALAVAQ+GK GN+ AGWLPIC QV  
Sbjct: 66  SFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPK 125

Query: 125 YCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           +C Q++GAL  G                  +DP LL+K+
Sbjct: 126 FCDQITGALIAGFVALVLYVLLLLYSLHSVVDPFLLQKS 164

[Close]

BLAST of Carg19236 vs. TrEMBL
Match: tr|A0A1S3C0T2|A0A1S3C0T2_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.7e-61
Identity = 146/162 (90.12%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSS+AAALAVAQIGKNGNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSVAAALAVAQIGKNGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKK 163
           QVA+YC QV+GAL +GLXXXXXXXXXXXXXXXXXLDPLLLKK
Sbjct: 121 QVANYCSQVTGALVMGLXXXXXXXXXXXXXXXXXLDPLLLKK 162

[Close]

BLAST of Carg19236 vs. TrEMBL
Match: tr|A0A0A0K3S1|A0A0A0K3S1_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 7.7e-61
Identity = 144/162 (88.89%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           MGK KRICLLLLRLLALGST+SAAIVMA SHEEARFF+LSFEAKYTHTP+FKYFVIAN++
Sbjct: 1   MGKTKRICLLLLRLLALGSTVSAAIVMATSHEEARFFTLSFEAKYTHTPSFKYFVIANSV 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLPAESLLWRLVLCFD I+TMLLTSSIAAALAVAQIGK+GNSYAGWLPICD
Sbjct: 61  ASVYGFLVLFLPAESLLWRLVLCFDVIMTMLLTSSIAAALAVAQIGKDGNSYAGWLPICD 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKK 163
           QVA+YC QV+GAL +GL XXXXXXXXXXXXXXX LDPLLLKK
Sbjct: 121 QVANYCSQVTGALVMGLLXXXXXXXXXXXXXXXLLDPLLLKK 162

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BLAST of Carg19236 vs. TrEMBL
Match: tr|A0A199UCP8|A0A199UCP8_MANES (CASP-like protein OS=Manihot esculenta OX=3983 GN=MANES_S000500 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 105/163 (64.42%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M K KRIC LLLRL+A G+TL+AAIVMA SHE + FF++SFEAKY+ TPAFKYFVIANAI
Sbjct: 1   MAKIKRICTLLLRLIAFGTTLAAAIVMATSHETSSFFAVSFEAKYSDTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLP++SLLWRLV+  D ++TMLLTSS++AALA+ Q+GK GNS AGWLPIC 
Sbjct: 61  ASVYGFLVLFLPSDSLLWRLVVAMDVVVTMLLTSSVSAALAIGQVGKKGNSNAGWLPICG 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QV  YC QV+GALA G                  L+PLL++KT
Sbjct: 121 QVPKYCNQVTGALAAGFVAVITYAVLLLYAIHAVLNPLLVQKT 163

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BLAST of Carg19236 vs. TrEMBL
Match: tr|W9SF46|W9SF46_9ROSA (CASP-like protein OS=Morus notabilis OX=981085 GN=L484_009820 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.1e-46
Identity = 104/163 (63.80%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M K +R+ LLL+RLLA  +TLSAA+VMA SHE+A  F++SFEAKY+ TPAFKYFVIANAI
Sbjct: 1   MAKTQRLALLLVRLLAFAATLSAAVVMATSHEKASLFTISFEAKYSQTPAFKYFVIANAI 60

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
            SVYG  VLFLP+ESLLWRLV+ FD + TMLL SSI+AALA+A +GK GN+YAGWLPIC 
Sbjct: 61  VSVYGILVLFLPSESLLWRLVVAFDLVFTMLLNSSISAALAIAYVGKKGNTYAGWLPICG 120

Query: 121 QVASYCRQVSGALALGLXXXXXXXXXXXXXXXXXLDPLLLKKT 164
           QV  YC QV GAL  G                  LDPLLLKKT
Sbjct: 121 QVPRYCGQVKGALIAGFIALIIYMALLLHAIHTVLDPLLLKKT 163

[Close]

BLAST of Carg19236 vs. TrEMBL
Match: tr|A0A2I4FJI4|A0A2I4FJI4_9ROSI (CASP-like protein OS=Juglans regia OX=51240 GN=LOC108999364 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.9e-45
Identity = 99/136 (72.79%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MGKPKRICLLLLRLLALGSTLSAAIVMAASHEEARFFSLSFEAKYTHTPAFKYFVIANAI 60
           M K + +CLLL+RLLALG+TLSAAIVMA SHE+A FF+LSFEAKY +TPAFKYFVIA A+
Sbjct: 8   MAKTEWLCLLLVRLLALGATLSAAIVMATSHEKASFFALSFEAKYDNTPAFKYFVIAEAV 67

Query: 61  ASVYGFFVLFLPAESLLWRLVLCFDAILTMLLTSSIAAALAVAQIGKNGNSYAGWLPICD 120
           ASVYGF VLFLP++  LWRLV+  D + TMLLTSSI+AALA+AQ+GK GNS AGWLPICD
Sbjct: 68  ASVYGFLVLFLPSKGPLWRLVIALDVVFTMLLTSSISAALAIAQVGKKGNSSAGWLPICD 127

Query: 121 QVASYCRQVSGALALG 137
           QV  YC QV GAL  G
Sbjct: 128 QVHKYCDQVKGALIAG 143

The following BLAST results are available for this feature:

BLAST of Carg19236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554623.1	3.4e-68	100.00	LOW QUALITY PROTEIN: CASP-like protein 1C1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969278.1	9.8e-68	88.96	CASP-like protein 1C1 [Cucurbita maxima]	[more]
XP_022952801.1	3.7e-67	88.34	CASP-like protein 1C1 [Cucurbita moschata]	[more]
XP_008455324.1	4.0e-61	90.12	PREDICTED: CASP-like protein 1C1 [Cucumis melo]	[more]
XP_004137023.1	1.2e-60	88.89	PREDICTED: CASP-like protein 1C1 [Cucumis sativus]	[more]

BLAST of Carg19236 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03540.1	1.8e-39	55.35	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	4.6e-35	50.94	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.4e-15	40.54	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	2.0e-14	35.00	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	7.6e-14	40.30	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg19236 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9N2D0\|CSPLK_POPTR	1.6e-45	62.11	CASP-like protein 1C2 OS=Populus trichocarpa OX=3694 GN=POPTR_0019s13170g PE=2 S...	[more]
sp\|B9N5U6\|CSPL4_POPTR	8.0e-45	68.38	CASP-like protein 1C3 OS=Populus trichocarpa OX=3694 GN=POPTR_0013s13520g PE=3 S...	[more]
sp\|B9RW00\|CSPL6_RICCO	1.8e-44	59.51	CASP-like protein 1C1 OS=Ricinus communis OX=3988 GN=RCOM_1174750 PE=2 SV=1	[more]
sp\|A7PJ32\|CSPL2_VITVI	9.8e-43	67.94	CASP-like protein 1C2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03760 PE=2 SV=1	[more]
sp\|D7M2M8\|CSPLF_ARALL	8.6e-39	55.97	CASP-like protein 1C1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Carg19236 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0T2\|A0A1S3C0T2_CUCME	2.7e-61	90.12	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103495515 PE=3 SV=1	[more]
tr\|A0A0A0K3S1\|A0A0A0K3S1_CUCSA	7.7e-61	88.89	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047980 PE=3 SV=1	[more]
tr\|A0A199UCP8\|A0A199UCP8_MANES	1.3e-47	64.42	CASP-like protein OS=Manihot esculenta OX=3983 GN=MANES_S000500 PE=3 SV=1	[more]
tr\|W9SF46\|W9SF46_9ROSA	3.1e-46	63.80	CASP-like protein OS=Morus notabilis OX=981085 GN=L484_009820 PE=3 SV=1	[more]
tr\|A0A2I4FJI4\|A0A2I4FJI4_9ROSI	5.9e-45	72.79	CASP-like protein OS=Juglans regia OX=51240 GN=LOC108999364 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom
IPR006459	CASP/CASPL

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19236-RA	Carg19236-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 10..153 e-value: 1.0E-43 score: 146.8
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..141 e-value: 1.0E-36 score: 125.9
None	No IPR available	PANTHER	PTHR11615:SF159	CASP-LIKE PROTEIN 1C1-RELATED	coord: 1..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 1..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19236	Cla002274	Watermelon (97103) v1	carwmB0878
Carg19236	Csa7G047980	Cucumber (Chinese Long) v2	carcuB0891
Carg19236	MELO3C018737	Melon (DHL92) v3.5.1	carmeB0865
Carg19236	ClCG07G002920	Watermelon (Charleston Gray)	carwcgB0855
Carg19236	CSPI07G04620	Wild cucumber (PI 183967)	carcpiB0911
Carg19236	Cucsa.147670	Cucumber (Gy14) v1	carcgyB0997
Carg19236	CmaCh19G009860	Cucurbita maxima (Rimu)	carcmaB1214
Carg19236	CmoCh19G010220	Cucurbita moschata (Rifu)	carcmoB1183
Carg19236	Lsi11G015520	Bottle gourd (USVL1VR-Ls)	carlsiB795
Carg19236	Cp4.1LG15g08080	Cucurbita pepo (Zucchini)	carcpeB1220
Carg19236	CsGy7G004210	Cucumber (Gy14) v2	carcgybB0864
Carg19236	MELO3C018737.2	Melon (DHL92) v3.6.1	carmedB0874
Carg19236	CsaV3_7G004420	Cucumber (Chinese Long) v3	carcucB0915
Carg19236	Cla97C07G131260	Watermelon (97103) v2	carwmbB0918
Carg19236	Bhi05G001618	Wax gourd	carwgoB1021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19236	Wax gourd	carwgoB1025
Carg19236	Silver-seed gourd	carcarB178
Carg19236	Silver-seed gourd	carcarB590
Carg19236	Cucurbita maxima (Rimu)	carcmaB1211
Carg19236	Cucurbita maxima (Rimu)	carcmaB1213
Carg19236	Cucurbita moschata (Rifu)	carcmoB1179
Carg19236	Cucurbita moschata (Rifu)	carcmoB1181
Carg19236	Cucurbita moschata (Rifu)	carcmoB1182
Carg19236	Cucurbita pepo (Zucchini)	carcpeB1218
Carg19236	Cucurbita pepo (Zucchini)	carcpeB1222
Carg19236	Cucurbita pepo (Zucchini)	carcpeB1223
Carg19236	Bottle gourd (USVL1VR-Ls)	carlsiB794
Carg19236	Watermelon (Charleston Gray)	carwcgB0850
Carg19236	Watermelon (97103) v1	carwmB0882
Carg19236	Watermelon (97103) v2	carwmbB0912
Carg19236	Watermelon (97103) v2	carwmbB0913