Carg19200 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAGGAAATAGAGGAGAGGGAACATGTTTATTGCATAGCAGAAGTAGTGAATTGGTGGCCAAAAGAAGAAGTGTCAAGAACTTGGCCACCAGCAGCTGGTTTGCAGAGGAGTTGATGTCTTATTTTCTTTTGTACTCATTTGTGTTCTTAATTTCTGTCGTTAATTGTTTTGCTAAAGATATCTTAGAGTTTAAGAGTTGCATAACTGATGAGCGAGGGGATACTCTTGTATCCGCAGGATCCAGATTCGAACTTGGATTTTTTACGCCGTATGGCAGCTCTGATGGCAGAAGATACTTGGGAATATGGTATTACAAATCAAATCCAAGTACGGTTGTTTGGGTTGCCAATCGAGACAGGCCACTTGCTGGTTCAGATGGTGTCTTTAAGATTGAGGATGATGGCAACCTCAAAGTATATAATGGAAATCAGAATCTTTATTGGTCAACAAACATTGGAAGTTCTGTACTCGATCACAGGACCCTGAAGCTAATGGATAATGGAAATCTGGTTTTGAGCTATGTAGATCAGGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGGTAATGGATGATAACTTAGTGCTGACTTCATGGAAGAGCTATGATAATCCGGCTCAAGGGAACTTCACTTTTCAGCTAGATCAAGATGGAAGTCAATATGTCATTTGGAAGAGATCAGTTAAATACTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATAGTGATACAAGGTTAGTATTGAACAGCTCAGGTCAGCTTCTATATCTAAACTGGGATGATCACAAAGTCTGGTCTCAGATTTGGGTAGAGCCGAGAGATAGATGCAGTGTGTATAATGCGTGTGGCGATTTTGCTAGCTGTAATAGTGAGGGTGGTATGGCTTGCAAATGCCTGCCTGGTTTTGAGCCCACCTCTCTAGAGAGTTGGAATATTGGAGATTATTCTGGTGGATGCATCAGGAAATCACCAATATGCAGTGTCGACAATGAAAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCAGACTTCCAGTTTAATGCAAAGGATGTCTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCGGTGTCAGGCTTACTCATATTTTGAAGCTAATATCACTAGGCAGGGTGGGATTGATAATTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAATTTGATAATGGCCGTGACCTCAACGTTCGAGTAGCAGTTCAAGATCTAGGTATGTTTGTGTATGTGTCTTTCAAAATGATGAATTTTCAGTTGTGTTTTTAAAGTTCTGTGAGTTTGCACTTCTGCAGAGTTGACTGTCAGAAATTGTGGAACATGTGGCACAAACCTCATTCCTTATCCGCTTAGCACAGGACCTGAATGTGGTGACCCAATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTTAACTTTGAAGCAGCAGGTGGAACGTACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTATCATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAGCCCTTCAGCTGAACCAGTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCAGAGATTTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCGGTTGGGAGCCTCCATTAGAGCCAACTTGTTCTTCAACTACAGACTGCAAAGACTGGCCTTACTCAACTTGCAACACGAGTAAAGATGGAAATAAAAGATGCCTTTGCATTACAAACTTCCATTGGAATGGCTGGAGCTTGAATTGCACCACAGGTAAGAATCATTGCATATAATGTTTCTAGTTATGTTCATTCGTAATGGCATTGATGCTGGGAACCATTAGCTACATAAAATTTTCTTATACCAAGAGTCCCTTATTGATGTTTCCATAGATCACAACAAAGAAAAGGATGGAAGAGGCAAAACGAGCTTCTATGTGATTATTGTTGCAACAACCATATGTATAGTCCTTCTGATTATTCTCTCATGTACTGGGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAA ATGGATGAAGGAAATAGAGGAGAGGGAACATGTTTATTGCATAGCAGAAGTAGTGAATTGGTGGCCAAAAGAAGAAGTGTCAAGAACTTGGCCACCAGCAGCTGGTTTGCAGAGGAGTTGATGTCTTATTTTCTTTTGTACTCATTTGTGTTCTTAATTTCTGTCTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATAGTGATACAAGGTTAGATGTCTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCGGTGTCAGGCTTACTCATATTTTGAAGCTAATATCACTAGGCAGGGTGGGATTGATAATTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAATTTGATAATGGCCGTGACCTCAACGTTCGAGTAGCAGTTCAAGATCTAGAAGCGCGGAAATTTATCATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAGCCCTTCAGCTGAACCAGTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCAGAGATTTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCGGTTGGGAGCCTCCATTAGAGCCAACTTGTTCTTCAACTACAGACTGCAAAGACTGGCCTTACTCAACTTGCAACACGAGTAAAGATGGAAATAAAAGATGCCTTTGCATTACAAACTTCCATTGGAATGGCTGGAGCTTGAATTGCACCACAGAGTCCCTTATTGATGTTTCCATAGATCACAACAAAGAAAAGGATGGAAGAGGCAAAACGAGCTTCTATGTGATTATTGTTGCAACAACCATATGTATAGTCCTTCTGATTATTCTCTCATGTACTGGGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAA ATGGATGAAGGAAATAGAGGAGAGGGAACATGTTTATTGCATAGCAGAAGTAGTGAATTGGTGGCCAAAAGAAGAAGTGTCAAGAACTTGGCCACCAGCAGCTGGTTTGCAGAGGAGTTGATGTCTTATTTTCTTTTGTACTCATTTGTGTTCTTAATTTCTGTCTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATAGTGATACAAGGTTAGATGTCTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCGGTGTCAGGCTTACTCATATTTTGAAGCTAATATCACTAGGCAGGGTGGGATTGATAATTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAATTTGATAATGGCCGTGACCTCAACGTTCGAGTAGCAGTTCAAGATCTAGAAGCGCGGAAATTTATCATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAGCCCTTCAGCTGAACCAGTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCAGAGATTTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCGGTTGGGAGCCTCCATTAGAGCCAACTTGTTCTTCAACTACAGACTGCAAAGACTGGCCTTACTCAACTTGCAACACGAGTAAAGATGGAAATAAAAGATGCCTTTGCATTACAAACTTCCATTGGAATGGCTGGAGCTTGAATTGCACCACAGAGTCCCTTATTGATGTTTCCATAGATCACAACAAAGAAAAGGATGGAAGAGGCAAAACGAGCTTCTATGTGATTATTGTTGCAACAACCATATGTATAGTCCTTCTGATTATTCTCTCATGTACTGGGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAA MDEGNRGEGTCLLHSRSSELVAKRRSVKNLATSSWFAEELMSYFLLYSFVFLISVFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYSDTRLDVFDCKLECLNNCRCQAYSYFEANITRQGGIDNSACWIWSGDLNNLQDEFDNGRDLNVRVAVQDLEARKFIIQTKEAGDCGDKNWINKALQLNQSSPFHVTSWCNFKETNPEIFSLKTSNEVEIGWEPPLEPTCSSTTDCKDWPYSTCNTSKDGNKRCLCITNFHWNGWSLNCTTESLIDVSIDHNKEKDGRGKTSFYVIIVATTICIVLLIILSCTGFYIYFSKTGLIERQ
BLAST of Carg19200 vs. NCBI nr
Match: XP_022952204.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X3 [Cucurbita moschata]) HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137 Identity = 318/690 (46.09%), Postives = 318/690 (46.09%), Query Frame = 0
BLAST of Carg19200 vs. NCBI nr
Match: XP_022952202.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X1 [Cucurbita moschata]) HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137 Identity = 318/690 (46.09%), Postives = 318/690 (46.09%), Query Frame = 0
BLAST of Carg19200 vs. NCBI nr
Match: XP_022968939.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Cucurbita maxima]) HSP 1 Score: 488.0 bits (1255), Expect = 2.5e-134 Identity = 312/690 (45.22%), Postives = 313/690 (45.36%), Query Frame = 0
BLAST of Carg19200 vs. NCBI nr
Match: XP_022968937.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X1 [Cucurbita maxima]) HSP 1 Score: 488.0 bits (1255), Expect = 2.5e-134 Identity = 312/690 (45.22%), Postives = 313/690 (45.36%), Query Frame = 0
BLAST of Carg19200 vs. NCBI nr
Match: XP_023554357.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133 Identity = 311/690 (45.07%), Postives = 312/690 (45.22%), Query Frame = 0
BLAST of Carg19200 vs. TAIR10
Match: AT4G03230.1 (S-locus lectin protein kinase family protein) HSP 1 Score: 152.1 bits (383), Expect = 5.8e-37 Identity = 83/232 (35.78%), Postives = 117/232 (50.43%), Query Frame = 0
BLAST of Carg19200 vs. TAIR10
Match: AT4G27290.1 (S-locus lectin protein kinase family protein) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09 Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Carg19200 vs. TAIR10
Match: AT1G65800.1 (receptor kinase 2) HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of Carg19200 vs. TAIR10
Match: AT4G21380.1 (receptor kinase 3) HSP 1 Score: 48.9 bits (115), Expect = 6.9e-06 Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Carg19200 vs. TAIR10
Match: AT4G27300.1 (S-locus lectin protein kinase family protein) HSP 1 Score: 48.9 bits (115), Expect = 6.9e-06 Identity = 25/85 (29.41%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of Carg19200 vs. Swiss-Prot
Match: sp|Q9ZR08|Y4230_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3) HSP 1 Score: 72.0 bits (175), Expect = 1.4e-11 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Carg19200 vs. Swiss-Prot
Match: sp|O81832|Y4729_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08 Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Carg19200 vs. Swiss-Prot
Match: sp|P07761|SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea OX=3712 GN=SLSG PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 6.6e-06 Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of Carg19200 vs. Swiss-Prot
Match: sp|P22553|SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra OX=3714 GN=SLSG PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Carg19200 vs. Swiss-Prot
Match: sp|P17840|SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea OX=3712 GN=SLSG PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05 Identity = 26/82 (31.71%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Carg19200 vs. TrEMBL
Match: tr|A0A1S3C207|A0A1S3C207_CUCME (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Cucumis melo OX=3656 GN=LOC103495558 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 2.4e-114 Identity = 237/439 (53.99%), Postives = 247/439 (56.26%), Query Frame = 0
HSP 2 Score: 78.2 bits (191), Expect = 3.9e-11 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of Carg19200 vs. TrEMBL
Match: tr|A0A0A0K287|A0A0A0K287_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045520 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.3e-112 Identity = 235/439 (53.53%), Postives = 246/439 (56.04%), Query Frame = 0
HSP 2 Score: 78.2 bits (191), Expect = 3.9e-11 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of Carg19200 vs. TrEMBL
Match: tr|A0A251Q479|A0A251Q479_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G226000 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.6e-57 Identity = 122/288 (42.36%), Postives = 161/288 (55.90%), Query Frame = 0
HSP 2 Score: 57.8 bits (138), Expect = 5.4e-05 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Carg19200 vs. TrEMBL
Match: tr|A0A2P4H021|A0A2P4H021_QUESU (G-type lectin s-receptor-like serine/threonine-protein kinase OS=Quercus suber OX=58331 GN=CFP56_05846 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 2.2e-54 Identity = 121/290 (41.72%), Postives = 157/290 (54.14%), Query Frame = 0
BLAST of Carg19200 vs. TrEMBL
Match: tr|A0A2I4ERD1|A0A2I4ERD1_9ROSI (G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Juglans regia OX=51240 GN=LOC108991976 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51 Identity = 142/407 (34.89%), Postives = 174/407 (42.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |