Carg19016 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19016
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AP2-like ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_115 : 215875 .. 219605 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCTCTCCGCCGTCTGTTGCGATGAGTATCTCTCCCTCTGCTTCTTCTTGCTCTTCGTCTTCCTCTTCCTGCGTCGGTTCAGATTCCGCCATTAATATTAAGAAGAAGAAGAAGAATCTCTCCGCTCCTCTCCGGCCGCACTCGGAGAAAGCCAGAATCAAGCGGCGACGGAGGAATCAGGACGAATCGAAACGCGAGATTCATAATAACAACAGCACTGGAATCAACAACAACAACAACAACAACGCATCTTCCGCTCGCCGGAGTTCCATTTACAGAGGAGTCACGAGGTATTTTCCTTCTCATTTTTTCATTTTTTTTTTCAATTTGATTTGTGTTTTCGATTTGCATGTTGAATTGAGATTGAGAAATCGCTGTTTCGAATCGAAATCTCAGGCATCGATGGACCGGCCGGTTCGAAGCTCATCTTTGGGACAAGAGTTCATGGAATAGCATTCAGAACAAAAAAGGAAGGCAAGGTAAAAAAAGAAAAATTACAAATTAATTAATTAATTAAAGTAGAGATCTAAAAAATTATTTGTTTATTCGGTTAATTTTAATTTTAATTTTAATTTTTTATATAATTATATATAATGAAGCCCTGATTTTGTTTTGCTGACTGTGTATTGGGACCTCCCCTGTCATCGCCAACGTTCATAATCGCTGCTCAGTTTATTTGGGTAAGCTCTCTCTATTTTTAAAATTACATATATTTCTGGACACGTGTTGGGATAATAGCGGTGTCTTATTCTTCGGAGTTAAAAATTTAGGGACGTTTAGAGCACTAATTCGAAATCGAAAGTCTTAGAATCTTTAAACAGGAATAAAAAATGCCGAACTATTTTAAAATCTGTGTTTAGAGTACCGAATTCACAGAATTTCGAGAGAAATTATGAGTTTAGAGTTAAAAATTAACAAACGAGCTTATAGTTAAAAATTTAGGGACGTTTAGACACTAGTTCGGAATTGGAATCTTGGAATTGTTAGATAGGAATATTAGTTTAGAGGGAGTTCGGTACTTAAATTCGACAAACGAGCTTAGAGACGTTTAGGGCACTAGTTCGAAATTGAAAATCATGAATAAAAGTTACCGTACTATTTTAAAATCTGTATTTAGAGTACCGAGTTAGCTGAATTTTGAATGAAACTATTAGTTTAGAGGGAGTTCGGTACTTAAATCGGACCAACGAGCTTAGATTTAAAAACTTAGGGACATTTAGGGGACTAATTTGGATCGAAAATCTTAAAATTTTAAAATAGGAATAAAAAATACGGAACTATTCTAAAATCTGTGTTTGAAGTACAAAATTAGCTGTATTCCGAGAGAAACTATGGGATTGAGGGATTTCGTACCTAAACTCGACTACCGAGCTTAGATTTAGAACCCGATTTCACTCGAATCTTCAAACAACTAGTTGATTATTTATTTATTTTTTTTTATTTTTTTTTATTTTTTTTTTGCAGGAGCTTATGATAACGAGGAAGCTGCAGCACGAACTTATGACCTTGCTGCCCTCAAATACTGGGGACCGGAAACCACTCTCAATTTCCCGGTACTTCTAATCTTCAAGGCTAAAACTGACATTTCACGTTTTATTTTCTGTTTTTTTCCTCAATTTATCTCATTAAATTTCCCAATTTCGTAATTTATTTCTCGAAGCATATTGTAAAAAAAATTTAAAAAAAAAATGGACGGAATATAATAAGGACCGCAATTTAAAGAGGTCAATTTAAAAATGTGGGATTTTCCTTTTTTAGTTATTTAAACATGTGAATTAAATATTAAATGTGGGGGCAAAAAAATGCAGGCAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTAACGAAGGAAGAATATTTGGCGTCGTTGCGGCGGCGGAGCAGCGGATTTTCTAGAGGCGTTTCTAAGTACCGCGGCGTGGCCCGACACCACTACAATGGCCGGTGGGAGGCTCGGATTGGCCGCGTTTTTGGAAGCAAATATCTTTACTTGGGAACTTACAGTACGTTTTCTCTCTCCCCCTCTTTCTCTCTCTACTTTTTCAAACTCCACGTGGCATGCCCACGTGGATTTTAGTCTTAGCTGACGCCTACTTATAACTACGTGGACTAGCCTGTCAGCTAACGTGGCACCGTCCTTCTTACTTTTCTTTTTGAAAATTGAATTTCTCCTAATAATTGGTTAACAAATATTTAAAATTATTAGGGTTTTTTGTTAATTGGTTAGCTACTGGACAGAGAAAAATGAGGTCGGTAATTTAAAAAATATATATATATTAATTAAATACTATTTTTATTTTTTTTAAGTAATATATCTCAGTGGATTCTAATTTTTTAATCCTTTTTCAATTATTAAAAGCAATTTTAAGCCACGAGTGGTCCACGTGGGTAAATAATTTGGGGGCTCGGAGGGGTTGTACGGCACGTGATCCTACTCTGCTGGCCCTATTAAAAAAATCGAATAAAACAGACCTTTTCGTCCACAGCTTTCCAAAAGTAACGGAAAAGCAGTATGTGTCACGTGCCATTTTTTTAAATTAATATTTTAAAAATTAATTTATTTTTTGGGTTTTTTATTAGTTTTTTTTTTTTAAATAAAAAACCAAAAATCACGGGAAATTCTTATGGACCAGTTGTTCTGTATTCCTGCTTTCAATATTTTGACTTTTTTTTTAATTATTTTTTAATCTATTTTCTTTATAAAATATATATATATGCATGTATATATATAATATATTCATACATACATCTATATATATATATATACACATACATACATACATATACATACATATATACATACATATATATATATATATATATATATATATATGTATGTATGTATGTATATATATATTTCTTTTTCACTTCCATGAATAAACTGTTATTTACTGAGAAATGAAGAGAATATGATCTGTTTTTCTGATACGTTTGTAATTAATTAATTAATTTAGATTAAAAAAAAGTATAATGGTCACGTGATTTCTTATCAAAATCCTCCCAAACCAAACCGCATTTAAACTTCTTTAATCCCATTTAATGAAGTAATTAAATTAATCTTCTTACTTAAGCTTAGTTTAATCTGATTTTATTATTATGATTAGACACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCAATTGAATACAGAGGACCCAATGCGGTTACCAACTTTGACATTAGCAATTACATTGGGAGGAGATTAGAGACCAAATCATCAGTTTTTGAAGCAGCTGAGCAACCAAAAGAAGAGCCCAATGACTCCCCTGTTTCTTCTGAGGGAGAAGTTGTGTATCAGCCCGAAGAACAGCAAACGACATCGTGGCCGAGCCTTCAATTCTCGACGATGCTTCCATCGATCGAGAATAGCCCGTCAATGGGTGTCATGGGAGACGATCAGGATCTCAATTGGTCTTTCTTAGACACTGGATTCGTCGAGGTCCCTGACCTCCCGCTTGAGAAAACGAGTGAATTAGCTGATCTCTACTTCGATGAGATTGGGTTCGAGGACGACATTGGTTTGATGTTCGAAACGAGCATTGAGGGTGGTGATAGTAAAGAAGATCTTAATGTTGGGAAGATGGAGACGAACAATGCTCCTTCGCCATCGTCTTCGTCGATAATAACCAACTCGGTTTCGTGCGAAAAAGATGAGATTGTTGGGTTTTGTTGA

mRNA sequence

GCAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCTCTCCGCCGTCTGTTGCGATGAGTATCTCTCCCTCTGCTTCTTCTTGCTCTTCGTCTTCCTCTTCCTGCGTCGGTTCAGATTCCGCCATTAATATTAAGAAGAAGAAGAAGAATCTCTCCGCTCCTCTCCGGCCGCACTCGGAGAAAGCCAGAATCAAGCGGCGACGGAGGAATCAGGACGAATCGAAACGCGAGATTCATAATAACAACAGCACTGGAATCAACAACAACAACAACAACAACGCATCTTCCGCTCGCCGGAGTTCCATTTACAGAGGAGTCACGAGGCATCGATGGACCGGCCGGTTCGAAGCTCATCTTTGGGACAAGAGTTCATGGAATAGCATTCAGAACAAAAAAGGAAGGCAAGGAGCTTATGATAACGAGGAAGCTGCAGCACGAACTTATGACCTTGCTGCCCTCAAATACTGGGGACCGGAAACCACTCTCAATTTCCCGGCAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTAACGAAGGAAGAATATTTGGCGTCGTTGCGGCGGCGGAGCAGCGGATTTTCTAGAGGCGTTTCTAAGTACCGCGGCGTGGCCCGACACCACTACAATGGCCGGTGGGAGGCTCGGATTGGCCGCGTTTTTGGAAGCAAATATCTTTACTTGGGAACTTACAACACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCAATTGAATACAGAGGACCCAATGCGGTTACCAACTTTGACATTAGCAATTACATTGGGAGGAGATTAGAGACCAAATCATCAGTTTTTGAAGCAGCTGAGCAACCAAAAGAAGAGCCCAATGACTCCCCTGTTTCTTCTGAGGGAGAAGTTGTGTATCAGCCCGAAGAACAGCAAACGACATCGTGGCCGAGCCTTCAATTCTCGACGATGCTTCCATCGATCGAGAATAGCCCGTCAATGGGTGTCATGGGAGACGATCAGGATCTCAATTGGTCTTTCTTAGACACTGGATTCGTCGAGGTCCCTGACCTCCCGCTTGAGAAAACGAGTGAATTAGCTGATCTCTACTTCGATGAGATTGGGTTCGAGGACGACATTGGTTTGATGTTCGAAACGAGCATTGAGGGTGGTGATAGTAAAGAAGATCTTAATGTTGGGAAGATGGAGACGAACAATGCTCCTTCGCCATCGTCTTCGTCGATAATAACCAACTCGGTTTCGTGCGAAAAAGATGAGATTGTTGGGTTTTGTTGA

Coding sequence (CDS)

ATGAGTATCTCTCCCTCTGCTTCTTCTTGCTCTTCGTCTTCCTCTTCCTGCGTCGGTTCAGATTCCGCCATTAATATTAAGAAGAAGAAGAAGAATCTCTCCGCTCCTCTCCGGCCGCACTCGGAGAAAGCCAGAATCAAGCGGCGACGGAGGAATCAGGACGAATCGAAACGCGAGATTCATAATAACAACAGCACTGGAATCAACAACAACAACAACAACAACGCATCTTCCGCTCGCCGGAGTTCCATTTACAGAGGAGTCACGAGGCATCGATGGACCGGCCGGTTCGAAGCTCATCTTTGGGACAAGAGTTCATGGAATAGCATTCAGAACAAAAAAGGAAGGCAAGGAGCTTATGATAACGAGGAAGCTGCAGCACGAACTTATGACCTTGCTGCCCTCAAATACTGGGGACCGGAAACCACTCTCAATTTCCCGGCAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTAACGAAGGAAGAATATTTGGCGTCGTTGCGGCGGCGGAGCAGCGGATTTTCTAGAGGCGTTTCTAAGTACCGCGGCGTGGCCCGACACCACTACAATGGCCGGTGGGAGGCTCGGATTGGCCGCGTTTTTGGAAGCAAATATCTTTACTTGGGAACTTACAACACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCAATTGAATACAGAGGACCCAATGCGGTTACCAACTTTGACATTAGCAATTACATTGGGAGGAGATTAGAGACCAAATCATCAGTTTTTGAAGCAGCTGAGCAACCAAAAGAAGAGCCCAATGACTCCCCTGTTTCTTCTGAGGGAGAAGTTGTGTATCAGCCCGAAGAACAGCAAACGACATCGTGGCCGAGCCTTCAATTCTCGACGATGCTTCCATCGATCGAGAATAGCCCGTCAATGGGTGTCATGGGAGACGATCAGGATCTCAATTGGTCTTTCTTAGACACTGGATTCGTCGAGGTCCCTGACCTCCCGCTTGAGAAAACGAGTGAATTAGCTGATCTCTACTTCGATGAGATTGGGTTCGAGGACGACATTGGTTTGATGTTCGAAACGAGCATTGAGGGTGGTGATAGTAAAGAAGATCTTAATGTTGGGAAGATGGAGACGAACAATGCTCCTTCGCCATCGTCTTCGTCGATAATAACCAACTCGGTTTCGTGCGAAAAAGATGAGATTGTTGGGTTTTGTTGA

Protein sequence

MSISPSASSCSSSSSSCVGSDSAINIKKKKKNLSAPLRPHSEKARIKRRRRNQDESKREIHNNNSTGINNNNNNNASSARRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQGAYDNEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAEQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIEGGDSKEDLNVGKMETNNAPSPSSSSIITNSVSCEKDEIVGFC

Homology

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BLAST of Carg19016 vs. NCBI nr
Match: XP_022968175.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita maxima])

HSP 1 Score: 640.2 bits (1650), Expect = 4.8e-180
Identity = 396/408 (97.06%), Postives = 398/408 (97.55%), Query Frame = 0


Query: 1   MSISPSASXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRPHSEKAXXXXXXXXXXXXXXXX 60
           MSISPSASXXXXXXXXXXXXXXXXXXXXXXX LSAPLRPHS+KA   XXXXXXXXXXXXX
Sbjct: 1   MSISPSASXXXXXXXXXXXXXXXXXXXXXXXNLSAPLRPHSDKA-RIXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ--- 120
           XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQVYL 120

Query: 121 GAYDNEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGF 180
           GAYDNEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGF
Sbjct: 121 GAYDNEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGF 180

Query: 181 SRGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAV 240
           SRGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAV
Sbjct: 181 SRGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAV 240

Query: 241 TNFDISNYIGRRLETKSSVFEAAEQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFST 300
           TNFDISNYIGRRLETKSSVFEAAEQPKEEPNDSPVSSEGEVVYQPEEQQT SWPSLQFST
Sbjct: 241 TNFDISNYIGRRLETKSSVFEAAEQPKEEPNDSPVSSEGEVVYQPEEQQTKSWPSLQFST 300

Query: 301 MLPSIENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLM 360
           MLPSIENSPSMGVMGDD DL+WSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLM
Sbjct: 301 MLPSIENSPSMGVMGDDHDLHWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLM 360

Query: 361 FETSIEGGDSKEDLNVGKMETNNAPSPSSSSIITNSVSCEKDEIVGFC 406
           FETSIEGGDSKEDLNVGKME NNAPSPSSSSIITNSVSCEKDEIVGFC
Sbjct: 361 FETSIEGGDSKEDLNVGKMEMNNAPSPSSSSIITNSVSCEKDEIVGFC 407

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BLAST of Carg19016 vs. NCBI nr
Match: XP_022945519.1 (LOW QUALITY PROTEIN: ethylene-responsive transcription factor WRI1-like [Cucurbita moschata])

HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177
Identity = 397/407 (97.54%), Postives = 397/407 (97.54%), Query Frame = 0


Query: 1   MSISPSASXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRPHSEKAXXXXXXXXXXXXXXXX 60
           MSISPSASXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRPHSEKA XXXXXXXXXXXXXXX
Sbjct: 1   MSISPSASXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRPHSEKA-XXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQG-- 120
           XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQVYL 120

Query: 121 AYDNEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFS 180
             D EEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFS
Sbjct: 121 GRDXEEAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFS 180

Query: 181 RGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVT 240
           RGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVT
Sbjct: 181 RGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVT 240

Query: 241 NFDISNYIGRRLETKSSVFEAAEQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTM 300
           NFDISNYIGRRLETKSSVFEAAE PKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTM
Sbjct: 241 NFDISNYIGRRLETKSSVFEAAELPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTM 300

Query: 301 LPSIENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMF 360
           LP IENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMF
Sbjct: 301 LPLIENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMF 360

Query: 361 ETSIEGGDSKEDLNVGKMETNNAPSPSSSSIITNSVSCEKDEIVGFC 406
           ETSIEGGDSKEDLNVGKME NNAPSPSSSSIITNSVSCEKDEIVGFC
Sbjct: 361 ETSIEGGDSKEDLNVGKMEMNNAPSPSSSSIITNSVSCEKDEIVGFC 406

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BLAST of Carg19016 vs. NCBI nr
Match: XP_023541145.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.0 bits (1595), Expect = 1.1e-173
Identity = 315/325 (96.92%), Postives = 315/325 (96.92%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ   G  DNEEAAARTYDLAALKYWGP
Sbjct: 82  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQVYLGNXDNEEAAARTYDLAALKYWGP 141

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI
Sbjct: 142 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 201

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA
Sbjct: 202 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 261

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWS 323
           E PKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWS
Sbjct: 262 ELPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWS 321

Query: 324 FLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIEGGDSKEDLNVGKMETNN 383
           FLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE  D KEDLNVGKME NN
Sbjct: 322 FLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE--DGKEDLNVGKMEMNN 381

Query: 384 APSPSSSSIITNSVSCEKDEIVGFC 406
           APSPSSSSIITNSVSCEKDEIVGFC
Sbjct: 382 APSPSSSSIITNSVSCEKDEIVGFC 404

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BLAST of Carg19016 vs. NCBI nr
Match: XP_022150644.1 (ethylene-responsive transcription factor WRI1 [Momordica charantia])

HSP 1 Score: 435.3 bits (1118), Expect = 2.3e-118
Identity = 244/333 (73.27%), Postives = 258/333 (77.48%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ   GAYDNEEAAARTYDLAALKYWGP
Sbjct: 81  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQVYLGAYDNEEAAARTYDLAALKYWGP 140

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
            TTLNFP ESY NE+EEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHH+NGRWEARI
Sbjct: 141 GTTLNFPVESYRNEIEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARI 200

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYIG RLE KSSVF AA
Sbjct: 201 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGVNAVTNFDISNYIG-RLENKSSVFPAA 260

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWS 323
           EQP  +PN SP                            PS+ENSP+   M +D DL+WS
Sbjct: 261 EQPL-QPNCSPAXXXXXXXXXXXXXXXXXMAFSGSPLQFPSMENSPT--TMEEDHDLHWS 320

Query: 324 FLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSI------EGGDSKEDLNVG 383
           FLDTGFV+VPDLPLEK+ EL DL+FDEIGFEDDIGL+FE S+      EGG+  ED  VG
Sbjct: 321 FLDTGFVQVPDLPLEKSGELPDLFFDEIGFEDDIGLIFEASLEDERCGEGGEKLED--VG 380

Query: 384 KMETN----------NAPSPSSSSIITNSVSCE 398
           KME            +  SPSSSS IT SVSCE
Sbjct: 381 KMEMMKSDHEERGLFSTTSPSSSS-ITTSVSCE 406

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BLAST of Carg19016 vs. NCBI nr
Match: XP_008446712.1 (PREDICTED: ethylene-responsive transcription factor WRI1 [Cucumis melo])

HSP 1 Score: 416.0 bits (1068), Expect = 1.5e-112
Identity = 226/297 (76.09%), Postives = 239/297 (80.47%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKG-RQGAYDNEEAAARTYDLAALKYWGPET 143
           IYRGVTRHRWTGRFEAHLWDKSSWN+IQNKK    GAYDNEEAAARTYDLAALKYWGP T
Sbjct: 78  IYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKEVYLGAYDNEEAAARTYDLAALKYWGPGT 137

Query: 144 TLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGR 203
           TLNFP ESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHH+NGRWEARIGR
Sbjct: 138 TLNFPVESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGR 197

Query: 204 VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAEQ 263
           VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYIG RLE KSS+ E A Q
Sbjct: 198 VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIG-RLENKSSLLEEATQ 257

Query: 264 PKEEPNDSPVSSEGEVVYQPEEQQTTSW----------PSLQFSTMLPSIENSPSMGVMG 323
             ++PN SPVS                           P LQF     SIE++P+M VM 
Sbjct: 258 QTDDPNYSPVSXXXXXXXXXXXXXXXXXXXXXXXXXXPPDLQF-----SIESNPAMVVMD 317

Query: 324 -----DDQDLNWSFLDTG-FVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE 364
                DD DL+WSFLDTG FV+VPDLPLEK+SELADLYFDEIGFEDDIG+MFE S+E
Sbjct: 318 EPPTQDDHDLHWSFLDTGLFVQVPDLPLEKSSELADLYFDEIGFEDDIGMMFEASLE 368

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BLAST of Carg19016 vs. TAIR10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 310.1 bits (793), Expect = 2.1e-84
Identity = 183/323 (56.66%), Postives = 211/323 (65.33%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKG+Q   GAYD+EEAAA TYDLAALKYWGP
Sbjct: 65  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGP 124

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           +T LNFPAE+YT E+EEM++VTKEEYLASLRR+SSGFSRGVSKYRGVARHH+NGRWEARI
Sbjct: 125 DTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARI 184

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFG+KYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYI R    K  VF   
Sbjct: 185 GRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRL--KKKGVFPF- 244

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTS------------------------------- 323
                 P +     EG +V   +E +T                                 
Sbjct: 245 ------PVNQANHQEGILVEAKQEVETREAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 324 ------WPSLQFSTMLPSIENSPSMGV--MGDDQDLNWSF--LDTG---FVEVPDLPLEK 360
                             I++S  M +   GD+ +L W+F  +DTG   F+   +L  E 
Sbjct: 305 XXXXXXXXXXXXXXXXXXIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANEN 364

[Close]

BLAST of Carg19016 vs. TAIR10
Match: AT1G79700.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-71
Identity = 144/253 (56.92%), Postives = 173/253 (68.38%), Query Frame = 0


Query: 85  YRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGPE 144
           YRGVTRHRWTGR+EAHLWDK+SWN  Q KKGRQ   GAYD EEAAAR YDLAALKYWG +
Sbjct: 53  YRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRD 112

Query: 145 TTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIG 204
           T LNFP  SY  +++EM   +KEEY+ SLRR+SSGFSRGVSKYRGVARHH+NGRWEARIG
Sbjct: 113 TLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIG 172

Query: 205 RVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYI--GRRLETKSSVFEA 264
           RVFG+KYLYLGTY TQEEAA AYD+AAIEYRG NAVTNFD+S Y+      +   S  + 
Sbjct: 173 RVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKP 232

Query: 265 AEQPKEEP--NDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDL 324
              P  EP  +D   S + E V +P            F   + +       G +  ++D+
Sbjct: 233 IRSPSREPESSDDNKSPKSEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDV 292

Query: 325 NW----SFLDTGF 327
            +    S+++ GF
Sbjct: 293 IFDCFNSYINPGF 305

[Close]

BLAST of Carg19016 vs. TAIR10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein)

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-70
Identity = 130/188 (69.15%), Postives = 152/188 (80.85%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           ++RGVTRHRWTGR+EAHLWDK+SWN  Q KKGRQ   GAYD E+AAAR YDLAALKYWG 
Sbjct: 58  VHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGR 117

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           +T LNFP  +Y  +++EM   +KEEY+ SLRR+SSGFSRGVSKYRGVA+HH+NGRWEARI
Sbjct: 118 DTILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARI 177

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFG+KYLYLGTY TQEEAA AYD+AAIEYRG NAVTNFDIS Y+  +L    +  + A
Sbjct: 178 GRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYL--KLPVPENPIDTA 237

Query: 264 EQPKEEPN 269
               E P+
Sbjct: 238 NNLLESPH 243

[Close]

BLAST of Carg19016 vs. TAIR10
Match: AT5G57390.1 (AINTEGUMENTA-like 5)

HSP 1 Score: 241.5 bits (615), Expect = 9.0e-64
Identity = 125/220 (56.82%), Postives = 160/220 (72.73%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGR+EAHLWD S     Q++KGRQ   G YD E+ AAR YDLAALKYWGP
Sbjct: 203 IYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGP 262

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
            TT NFP  +Y +E+EEM+ +T++E++ASLRR+SSGFSRG S YRGV RHH +GRW+ARI
Sbjct: 263 TTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARI 322

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRV G+K LYLGT++TQEEAA AYD+AAI++RG NAVTNFDIS Y  + +    ++    
Sbjct: 323 GRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSI-ASCNLPVGG 382

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLP 301
             PK  P+ +  +++  V   P +  + + PSL F+   P
Sbjct: 383 LMPK--PSPATAAADKTVDLSPSDSPSLTTPSLTFNVATP 419

[Close]

BLAST of Carg19016 vs. TAIR10
Match: AT1G51190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-62
Identity = 112/165 (67.88%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGR+EAHLWD S     Q++KGRQ   G YD EE AAR YDLAALKYWGP
Sbjct: 190 IYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGP 249

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
            TT NFP  +Y  E+EEM+ +T++E++AS+RR+SSGFSRG S YRGV RHH +GRW+ARI
Sbjct: 250 STTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARI 309

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNY 246
           GRV G+K LYLGT++T+EEAA AYD+AAI++RG NAVTNF+I+ Y
Sbjct: 310 GRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 354

[Close]

BLAST of Carg19016 vs. Swiss-Prot
Match: sp|Q6X5Y6|WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.7e-83
Identity = 183/323 (56.66%), Postives = 211/323 (65.33%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKG+Q   GAYD+EEAAA TYDLAALKYWGP
Sbjct: 65  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGP 124

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           +T LNFPAE+YT E+EEM++VTKEEYLASLRR+SSGFSRGVSKYRGVARHH+NGRWEARI
Sbjct: 125 DTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARI 184

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFG+KYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYI R    K  VF   
Sbjct: 185 GRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRL--KKKGVFPF- 244

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTS------------------------------- 323
                 P +     EG +V   +E +T                                 
Sbjct: 245 ------PVNQANHQEGILVEAKQEVETREAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 324 ------WPSLQFSTMLPSIENSPSMGV--MGDDQDLNWSF--LDTG---FVEVPDLPLEK 360
                             I++S  M +   GD+ +L W+F  +DTG   F+   +L  E 
Sbjct: 305 XXXXXXXXXXXXXXXXXXIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANEN 364

[Close]

BLAST of Carg19016 vs. Swiss-Prot
Match: sp|Q94AN4|AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.0e-69
Identity = 130/188 (69.15%), Postives = 152/188 (80.85%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           ++RGVTRHRWTGR+EAHLWDK+SWN  Q KKGRQ   GAYD E+AAAR YDLAALKYWG 
Sbjct: 58  VHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGR 117

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           +T LNFP  +Y  +++EM   +KEEY+ SLRR+SSGFSRGVSKYRGVA+HH+NGRWEARI
Sbjct: 118 DTILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARI 177

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFG+KYLYLGTY TQEEAA AYD+AAIEYRG NAVTNFDIS Y+  +L    +  + A
Sbjct: 178 GRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYL--KLPVPENPIDTA 237

Query: 264 EQPKEEPN 269
               E P+
Sbjct: 238 NNLLESPH 243

[Close]

BLAST of Carg19016 vs. Swiss-Prot
Match: sp|Q84Z02|CRL5_ORYSJ (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-62
Identity = 114/161 (70.81%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 85  YRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQGAYDNEEAAARTYDLAALKYWGPETTL 144
           YRGVTRHRWTGR+EAHLWD S     Q +KGRQG YD EE AAR YDLAALKYWGP T +
Sbjct: 289 YRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHI 348

Query: 145 NFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGRVF 204
           NFP E Y  E+EEM+ +T++EY+A LRR+SSGFSRG S YRGV RHH +GRW+ARIGRV 
Sbjct: 349 NFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVS 408

Query: 205 GSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNY 246
           G+K LYLGT++TQEEAA AYD+AAI++RG NAVTNFDI+ Y
Sbjct: 409 GNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRY 449

[Close]

BLAST of Carg19016 vs. Swiss-Prot
Match: sp|Q6PQQ3|AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 1.6e-62
Identity = 125/220 (56.82%), Postives = 160/220 (72.73%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGR+EAHLWD S     Q++KGRQ   G YD E+ AAR YDLAALKYWGP
Sbjct: 203 IYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGP 262

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
            TT NFP  +Y +E+EEM+ +T++E++ASLRR+SSGFSRG S YRGV RHH +GRW+ARI
Sbjct: 263 TTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARI 322

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRV G+K LYLGT++TQEEAA AYD+AAI++RG NAVTNFDIS Y  + +    ++    
Sbjct: 323 GRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSI-ASCNLPVGG 382

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLP 301
             PK  P+ +  +++  V   P +  + + PSL F+   P
Sbjct: 383 LMPK--PSPATAAADKTVDLSPSDSPSLTTPSLTFNVATP 419

[Close]

BLAST of Carg19016 vs. Swiss-Prot
Match: sp|A0JPZ8|AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.6e-62
Identity = 135/253 (53.36%), Postives = 163/253 (64.43%), Query Frame = 0


Query: 85  YRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGPE 144
           YRGVTRHRWTGR+EAHLWDK+SWN  Q KKGRQ   GAYD EEAAAR YDLAALKYWG +
Sbjct: 53  YRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRD 112

Query: 145 TTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIG 204
           T LNFP  SY  +++EM   +KEEY+ SLRR+SSGFSRGVSKYRGVARHH+NGRWEARIG
Sbjct: 113 TLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIG 172

Query: 205 RVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYI--GRRLETKSSVFEA 264
           RVF           TQEEAA AYD+AAIEYRG NAVTNFD+S Y+      +   S  + 
Sbjct: 173 RVFA----------TQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKP 232

Query: 265 AEQPKEEP--NDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDL 324
              P  EP  +D   S + E V +P            F   + +       G +  ++D+
Sbjct: 233 IRSPSREPESSDDNKSPKSEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDV 292

Query: 325 NW----SFLDTGF 327
            +    S+++ GF
Sbjct: 293 IFDCFNSYINPGF 295

[Close]

BLAST of Carg19016 vs. TrEMBL
Match: tr|A0A1S3BGJ3|A0A1S3BGJ3_CUCME (ethylene-responsive transcription factor WRI1 OS=Cucumis melo OX=3656 GN=LOC103489352 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.7e-113
Identity = 226/297 (76.09%), Postives = 239/297 (80.47%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKG-RQGAYDNEEAAARTYDLAALKYWGPET 143
           IYRGVTRHRWTGRFEAHLWDKSSWN+IQNKK    GAYDNEEAAARTYDLAALKYWGP T
Sbjct: 78  IYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKEVYLGAYDNEEAAARTYDLAALKYWGPGT 137

Query: 144 TLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGR 203
           TLNFP ESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHH+NGRWEARIGR
Sbjct: 138 TLNFPVESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGR 197

Query: 204 VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAEQ 263
           VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYIG RLE KSS+ E A Q
Sbjct: 198 VFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIG-RLENKSSLLEEATQ 257

Query: 264 PKEEPNDSPVSSEGEVVYQPEEQQTTSW----------PSLQFSTMLPSIENSPSMGVMG 323
             ++PN SPVS                           P LQF     SIE++P+M VM 
Sbjct: 258 QTDDPNYSPVSXXXXXXXXXXXXXXXXXXXXXXXXXXPPDLQF-----SIESNPAMVVMD 317

Query: 324 -----DDQDLNWSFLDTG-FVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE 364
                DD DL+WSFLDTG FV+VPDLPLEK+SELADLYFDEIGFEDDIG+MFE S+E
Sbjct: 318 EPPTQDDHDLHWSFLDTGLFVQVPDLPLEKSSELADLYFDEIGFEDDIGMMFEASLE 368

[Close]

BLAST of Carg19016 vs. TrEMBL
Match: tr|A0A0A0KWK1|A0A0A0KWK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612310 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.8e-106
Identity = 231/355 (65.07%), Postives = 243/355 (68.45%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKSSWN+IQNKKGRQ   GAYDNEEAAARTYDLAALKYWGP
Sbjct: 84  IYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKGRQVYLGAYDNEEAAARTYDLAALKYWGP 143

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
            TTLNFP ESYTNEME MRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHH+NGRWEARI
Sbjct: 144 GTTLNFPVESYTNEMEAMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARI 203

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAA 263
           GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRG NAVTNFDISNYIG RLE KSS+ +  
Sbjct: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIG-RLENKSSLLQXX 263

Query: 264 EQPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLP------SIENSPSMGVMG-- 323
                                                         SIEN+P+M +M   
Sbjct: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHFSIENNPAMVIMDEP 323

Query: 324 ---DDQDLNWSFLDTG-FVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIEGG--- 383
              DD DL+WSFLDTG FV+VPDLPLEK+SELADLYFDEIGFEDDIG+MFE S+E     
Sbjct: 324 PTQDDHDLHWSFLDTGLFVQVPDLPLEKSSELADLYFDEIGFEDDIGMMFEASLENNXXX 383

Query: 384 --------------DSKEDLNVGKMETN---------NAPSPSSSSIITNSVSCE 398
                                   ME N            SPSSSS IT SVSCE
Sbjct: 384 XXXXXXXXXXXXXXXXXXXXXXXXMEVNCSEKIRLFSTTTSPSSSS-ITTSVSCE 436

[Close]

BLAST of Carg19016 vs. TrEMBL
Match: tr|A0A2P5CF73|A0A2P5CF73_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF58 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 206/344 (59.88%), Postives = 235/344 (68.31%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQGAYDNEEAAARTYDLAALKYWGPETT 143
           IYRGVTRHRWTGRFEAHLWDKSSWN++QNKKGRQGAYD+EEAAARTYDLAALKYWGP TT
Sbjct: 60  IYRGVTRHRWTGRFEAHLWDKSSWNNVQNKKGRQGAYDSEEAAARTYDLAALKYWGPTTT 119

Query: 144 LNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGRV 203
           LNFP +SYT E EEM K TKEEYLASLRR+SSGFSRGVSKYRGVARHH+NGRWEARIGRV
Sbjct: 120 LNFPIDSYTKEREEMEKATKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRV 179

Query: 204 FGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAEQP 263
           FG+KYLYLGTY TQEEAAAAYDMAAIEYRG NAVTNFDISNYIGR    K    ++   P
Sbjct: 180 FGNKYLYLGTYKTQEEAAAAYDMAAIEYRGANAVTNFDISNYIGR---IKDKNGQSILIP 239

Query: 264 KEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGD---DQDLN-W 323
             E                     +S  +L+   +LP +++S    VM D   D +L+ W
Sbjct: 240 TAETEPXXXXXXXXXXXXXXXXXXSSGENLECHQLLPCLDSSTMAAVMIDSPVDHELSPW 299

Query: 324 SFLDTGFVE--VPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE-------------- 383
           SFLDTGFV   +PDLP+EK  EL DL FD  GFED+I L+F +                 
Sbjct: 300 SFLDTGFVHLPLPDLPMEKPGELLDL-FDNTGFEDNIDLIFGSXXXXXXXXXXXDDFAGV 359

Query: 384 ----------GGDSKEDLNVGKMETNNAPSPS-SSSIITNSVSC 397
                      G+ KED+N G+ +  +  S S SSS+   SVSC
Sbjct: 360 FDKLDNGNGGSGNVKEDVNGGRDQMGSFSSSSPSSSLTATSVSC 399

[Close]

BLAST of Carg19016 vs. TrEMBL
Match: tr|A0A2I4DUE1|A0A2I4DUE1_9ROSI (ethylene-responsive transcription factor WRI1-like OS=Juglans regia OX=51240 GN=LOC108983551 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.1e-95
Identity = 196/288 (68.06%), Postives = 222/288 (77.08%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQ---GAYDNEEAAARTYDLAALKYWGP 143
           IYRGVTRHRWTGRFEAHLWDKS+WN+IQNKKGRQ   GAYDNEEAAA TYDLAALKYWGP
Sbjct: 57  IYRGVTRHRWTGRFEAHLWDKSTWNNIQNKKGRQVYLGAYDNEEAAAHTYDLAALKYWGP 116

Query: 144 ETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARI 203
           ETTLNFP E+YT E+EEM+KV+KEEYLASLRRRSSGFSRGVSKYRGVARHH+NGRWEARI
Sbjct: 117 ETTLNFPIETYTKEVEEMQKVSKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARI 176

Query: 204 GRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGR-RLETKSSVFEA 263
           GRVFG+KYLYLGTYNTQEEAAAAYDMAA+EYRG NAVTNFD+SNYI R R +       +
Sbjct: 177 GRVFGNKYLYLGTYNTQEEAAAAYDMAALEYRGANAVTNFDVSNYIDRLRKKIPGFNLHS 236

Query: 264 AEQPK--EEPNDSPVSSEG-EVVYQPEEQQTTSWPSLQFSTMLP-SIENSPSMGVMGDDQ 323
             QP+  E PN     SE  EV  Q ++ Q  +   L F+ + P S+E S  + +   ++
Sbjct: 237 YTQPEAAELPNCCSTQSEVLEVDQQQQQPQKVAADHLNFNQLPPCSMETSTMVALDPANE 296

Query: 324 DLNWSFLDTGF--VEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETS 362
              WSF DT F  + VPDLPLEK  EL DL FD   FEDDI L+FE +
Sbjct: 297 QDPWSFFDTAFAPLRVPDLPLEKPCELTDL-FDHTVFEDDIDLIFEAA 343

[Close]

BLAST of Carg19016 vs. TrEMBL
Match: tr|A0A2P5E6H4|A0A2P5E6H4_9ROSA (AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF58 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.6e-94
Identity = 204/344 (59.30%), Postives = 234/344 (68.02%), Query Frame = 0


Query: 84  IYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQGAYDNEEAAARTYDLAALKYWGPETT 143
           +YRGVTRHRWTGRFEAHLWDKSSWN++QNKKGRQGAYD+EEAAARTYDLAALKYWGP TT
Sbjct: 60  MYRGVTRHRWTGRFEAHLWDKSSWNNVQNKKGRQGAYDSEEAAARTYDLAALKYWGPTTT 119

Query: 144 LNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGRV 203
           LNFP +SYT E+EEM K TKEEYLASLRR+SSGFSRGVSKYRGVARHH+NGRWEARIGRV
Sbjct: 120 LNFPIDSYTKEIEEMEKATKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRV 179

Query: 204 FGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAEQP 263
           FG+KYLYLGTY TQEEAAAAYDMAAIEYRG NAVTNFDISNYIGR    K    +    P
Sbjct: 180 FGNKYLYLGTYKTQEEAAAAYDMAAIEYRGANAVTNFDISNYIGR---IKDKNGQPILIP 239

Query: 264 KEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGD---DQDLN-W 323
             EP                        +L+   +LP +++S    VM D   D +L+ W
Sbjct: 240 TAEPXXXXXXXXXXXXXXXXXXXXXXXENLECHQLLPCLDSSTMAAVMIDSPVDHELSPW 299

Query: 324 SFLDTGFVE--VPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIE-------------- 383
           SFLDTGFV   VPDLP+EK  EL DL FD  GFE++I L+F +                 
Sbjct: 300 SFLDTGFVHLPVPDLPIEKPGELLDL-FDNTGFEENIDLIFGSXXXXXXXXXXXDDFAGV 359

Query: 384 ----------GGDSKEDLNVGKMETNNAPSPS-SSSIITNSVSC 397
                      G+ +ED+N G+ +  +  S S SSS+   SVSC
Sbjct: 360 FDKLDNGNGGSGNVEEDVNGGRDQMGSFSSSSPSSSLTATSVSC 399

The following BLAST results are available for this feature:

BLAST of Carg19016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968175.1	4.8e-180	97.06	ethylene-responsive transcription factor WRI1-like [Cucurbita maxima]	[more]
XP_022945519.1	1.7e-177	97.54	LOW QUALITY PROTEIN: ethylene-responsive transcription factor WRI1-like [Cucurbi...	[more]
XP_023541145.1	1.1e-173	96.92	ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022150644.1	2.3e-118	73.27	ethylene-responsive transcription factor WRI1 [Momordica charantia]	[more]
XP_008446712.1	1.5e-112	76.09	PREDICTED: ethylene-responsive transcription factor WRI1 [Cucumis melo]	[more]

BLAST of Carg19016 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54320.1	2.1e-84	56.66	Integrase-type DNA-binding superfamily protein	[more]
AT1G79700.2	1.2e-71	56.92	Integrase-type DNA-binding superfamily protein	[more]
AT1G16060.1	1.7e-70	69.15	ARIA-interacting double AP2 domain protein	[more]
AT5G57390.1	9.0e-64	56.82	AINTEGUMENTA-like 5	[more]
AT1G51190.1	6.4e-62	67.88	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg19016 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6X5Y6\|WRI1_ARATH	3.7e-83	56.66	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q94AN4\|AP2L1_ARATH	3.0e-69	69.15	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]
sp\|Q84Z02\|CRL5_ORYSJ	1.2e-62	70.81	AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. ja...	[more]
sp\|Q6PQQ3\|AIL5_ARATH	1.6e-62	56.82	AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana O...	[more]
sp\|A0JPZ8\|AP2L3_ARATH	3.6e-62	53.36	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]

BLAST of Carg19016 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGJ3\|A0A1S3BGJ3_CUCME	9.7e-113	76.09	ethylene-responsive transcription factor WRI1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0KWK1\|A0A0A0KWK1_CUCSA	1.8e-106	65.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612310 PE=4 SV=1	[more]
tr\|A0A2P5CF73\|A0A2P5CF73_PARAD	2.4e-95	59.88	AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF58 PE=4 S...	[more]
tr\|A0A2I4DUE1\|A0A2I4DUE1_9ROSI	9.1e-95	68.06	ethylene-responsive transcription factor WRI1-like OS=Juglans regia OX=51240 GN=...	[more]
tr\|A0A2P5E6H4\|A0A2P5E6H4_9ROSA	1.6e-94	59.30	AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF58 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19016-RA	Carg19016-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 85..96 score: 45.3 coord: 223..243 score: 50.13
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 183..247 e-value: 1.7E-24 score: 97.3 coord: 84..153 e-value: 4.4E-18 score: 76.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 84..139 e-value: 2.0E-8 score: 34.2 coord: 182..233 e-value: 1.2E-11 score: 44.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 84..147 score: 18.334
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 183..241 score: 18.281
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 182..243 e-value: 3.38752E-15 score: 68.8375
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 84..148 e-value: 9.80543E-17 score: 73.0747
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 182..243 e-value: 7.2E-20 score: 72.6 coord: 84..149 e-value: 1.6E-16 score: 61.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..292
None	No IPR available	PANTHER	PTHR32467	FAMILY NOT NAMED	coord: 8..294
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 83..148
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 182..243

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19016	Cla020457	Watermelon (97103) v1	carwmB1050
Carg19016	Csa5G612310	Cucumber (Chinese Long) v2	carcuB1066
Carg19016	MELO3C012314	Melon (DHL92) v3.5.1	carmeB1019
Carg19016	ClCG05G022110	Watermelon (Charleston Gray)	carwcgB1023
Carg19016	CSPI05G25940	Wild cucumber (PI 183967)	carcpiB1088
Carg19016	Cucsa.282940	Cucumber (Gy14) v1	carcgyB1166
Carg19016	CmaCh04G014590	Cucurbita maxima (Rimu)	carcmaB1457
Carg19016	CmaCh18G009710	Cucurbita maxima (Rimu)	carcmaB1456
Carg19016	CmoCh04G015290	Cucurbita moschata (Rifu)	carcmoB1412
Carg19016	CmoCh18G009730	Cucurbita moschata (Rifu)	carcmoB1411
Carg19016	Lsi04G001870	Bottle gourd (USVL1VR-Ls)	carlsiB960
Carg19016	Cp4.1LG09g03430	Cucurbita pepo (Zucchini)	carcpeB1464
Carg19016	Cp4.1LG01g14110	Cucurbita pepo (Zucchini)	carcpeB1466
Carg19016	CsGy5G025410	Cucumber (Gy14) v2	carcgybB1035
Carg19016	MELO3C012314.2	Melon (DHL92) v3.6.1	carmedB1031
Carg19016	CsaV3_5G035030	Cucumber (Chinese Long) v3	carcucB1099
Carg19016	Cla97C05G103850	Watermelon (97103) v2	carwmbB1109
Carg19016	Bhi07G000573	Wax gourd	carwgoB1235

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19016	Carg01883	Silver-seed gourd	carcarB629

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19016	Silver-seed gourd	carcarB616
Carg19016	Cucurbita maxima (Rimu)	carcmaB1455
Carg19016	Cucurbita pepo (Zucchini)	carcpeB1465