Carg18975 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18975
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Proteasome subunit alpha type
Location	Cucurbita_argyrosperma_scaffold_086 : 562604 .. 567032 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAGTCACTTTTGCCGGGTGCTGCTTGCCTGAGGGGTTTTCTTGGCGAGAAAGTTTTTTCGCGGCTCCGCTGCTATATTCTTCGAGCTCTCAATATCCATTTCCCCCCACAGATCCTGAACCCGTTGAAGCCCTAATTCATCTGAATCAGAAGCCATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCTTATTTCAAGTCGGTATGTATGCAATTCCTCTTCGATCTCGTTTTTGTTTCGATCGAACCAGTTGAACTATATGCTAGGGCTTGACCTTTTCAATTAATGTTCAAGAATCATTGCTTTTGAAGTGATTTAGCTTGACTGTATAAGTTTGAATGGTGAAAACTCTCGTTAAAGAAAGAAATATCTCCCTTCTGAAGTGTGAAGGTGTTTTTGTTGGAAGTATGGATGAGTGTGGTGTGGTAACGGTAGGGGCTCTGCTTTAATTAAATGTTTCGAGTGTTCATTTCACTTGCGATTACTGTCGAGTGAATGTGTCTAAGTATCCATCGGACGGAATTTAGGGGAAATGCGGAATCTATTTTCGTATTTGCTGCGGGTTAACGAAGGTCTTCTTTTTTTTTTTTTTTCCTCTTATAAGTAATTTAGTGTATTGCCTTTGATCTTTGCGAGTGTTAGCCTTTTCTTGAGTGCGGTGTATTTATTGAATATTTGGAAACCTTAGGCTGGAATCGCTAGGATTAACATTTAACACGTCTAGGATGCTGGCTTTGCTTTTAGTGACTCCTTGTATTAGAAAAGATTGCACAAGGAATTGTTTCCAATCAGTGAATTGTTATCATATCCCAGACGTCAACATTTTGAACGAAGTTATGCTTATCAAGTTTTTTTCCATTTGGTTTTGAGTTTTAGCTTGTCAGCAATTTTATATCTTCATGAATTCTTCATTTTGAAATCATCAACTAGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTTCCGGTGAGTATTATTGGTTTGGCCATGCCATTTCCTCAGACTCTCCTGAGCTGAAAATTTCGTTTCACTTATAGTAATGCCCATTGTTTTTGCAGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGGTTTCTTTTATGTCTTTTTGCCACTTATTGTTCAATAAAGAATCATGATTCAAGACAGATTTCTTGTCTTATGCTTGTATCAACCTCAGAATCAACTGGTGGCGATGATGAAAGTGTACACATTGTGAGATGGCAGCTTATGATAAGTTGGTTCAAGAGGAATTCCTCGACTATATTCCCATATTAGTCTTTTTAGGTGTATGATACACGTGTGTTTACTCTTGCTAGTGCTAATGATGTCTATCACAGTGATAATTTTTTTCTACACTACTTTGTACTGTTTTTAGTTCAAAGTACCACATGCAGTTGCTTCATTGTAAAAATCTACTTTGCTCAAATTTGGACGATAGAATTCCTCATCCAATTTTTCTGTACCACTCAGCTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGTATTCTGATCATTTCTGTCGACAATATTTTCCTTGCCTTTTGAGTTATCAATTGCATAGGAAGTGCCGGTGATTTGTTTGTCTTCAGTTCTGTGGCAATATTTAACTATGTTACGGTATTTCTTTTGCGTTTAGACAAGGCTTTTAAGCACAGACACTTTTGTTGATGTTGCTTTCCAAGTTAGATACATGGACATCAATCATTGAGTTTTGGTATATCACAGCAGGCACTAGACTAATGATATTGGAATTAACTGTTTTGCAGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGGTTGGTTTCTGGTTTATTTCGTATTTTAGATCCACATAGTGCTTGCTTGAACCTATTATACTATTTGTCATTAGCTTTTGAACTGGTCATTATCCGTCCTTTAAATTATTTTTCTCTTCCTTCTGAGTTTTCTTTAGTGGCAATGGTTTTGGGCATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGTAAGTAACCTTCTAGAAGAACAATTATTGGGACAGGAATTTAATGCCAATTTGCAGCATGTACCTATGTTCTAAATTTTATATTTTCCTTGAGGTGGATGCCACATTGGCAAAGATTTCCATTCAAATTCCTTTCCAGATGATGTTGCTAAAAAAAAAAAAAAAAGAACTCTTAGAATTAAAGCTTTATAGATTTAGCTCATATTTAAATACATACAATCTGATTGGTGTGATTTCTTAAGCTACCAGAGTGTGGGTTGTGGAATATAAGGAAACAGCTAGTTATTATATTGTCTTGCTTGTAGTTTGAAATTGTATTTATTTATATAAAAGTAGTATGGATATGTATTTTTTTATAAAAAAATTATAATAATTATAATAATTTGCTTTCAAATGTAAAATTTGTTGATCATCATCATTATAGTGATGCGTAGAGAACCTTTGCTATTTAGAGTGCACTGCACTTGAGCTGCTACACAATCTACCCGATTCGATAGTGGATGAAGGCATGGGTTGACTTTTGAAAAATGACTAATTCTTTCTTAAGATCTGAACAAAGGATTGTTTTAATTTCTCATTTGCTTTTATATTACCAACTATACTTGTTTGTTATGTGCTCCCTTGCTGTAGTTTCTTTTACCTTTTAAACTTGACATTAATATTTGGTTAACCATGCGAGTAAGAATTCACAACTATGTGATTTAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGGTAGATCTCATTTAATTTCAAATGTTTAGACCTTGTACCAGTCACATAGTTTCATCTTCTCTTTCTTGTTTTAATAGTTGGGTGGCATCAATATATCTATGCATACTTCCCAAAAGAAATTTTTACTCTTAATGTTTTAGTTATTCAGAATTGTTAGACGAACACGACTCTCCACAATAGTACGATATTGTCCACTTTGAGCATAAGCTCTTATGGTTTTGCTTTGGGCTTCCCCAAAAGACCTCATACTAATGGAGAGAGTATTCTTTGTTTATAAATCCATGACCATTCCCTAAATTAGCCGACATGGGACTTTCATCATCCAACAAAAATAACCCATATTTTCCCCCCAACTGTTTTGCTTAGAAAGAGAACTGAGGACTTAATTCGAAATATTCTCTGAAATTACTTTGGACCTAATATTCGTCGTTATTTTCATTTCATGTTCCAAAGCGTGGTTTTGATAGTGGCGGCAACATAGAAATGGAAATCTGATATCATTTTGACCATCTTTTTATGTGATAATCTTGTTTCTAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATTGAGGTACTTAAATTTCATCGTTTCTTCTCCAACAATTATGCTTGAGATTCTATCAAATAGAATGTTTAATCCAAGTTCTGATTTGACGCGCTAGCTTCCACTGTGTTGTTGACCATTAGTTATGTTATTGTCTGCAAAGGGTCACTGCATTCCACTGTATATATGTTACTCAAGTAAACTGCACCATAATTATGAACATAACACGTATGTATTTACAACGTTTACAGGTGGGAGTGGTTCGGTCGGAGAATCCCATCTTCAGAGTATTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGATTGACGCAAACCTCTCCGGACAAGCATATTGAGAACGTCTAACGACTTCGTTTCAGATGTCGGTTATCGCTGAGTTGCGTGCTTTATATATGCAGGTCCTTGAGGTAGTAGTAGTTGTACTTGCTTCTGAATTGCTGTAGACGGTGACATTCCCATTTTACTTAAACACTACATCAAAAACAAGTCATCTTTAGAATTTGTATCTCAGAGAAACTCGTCATGTTACATTATTTAACTCCCAATTCCCGTGTCTAATAACATGATGGTAAGTAGATTATGAACCCTCTTTCTCTATTTCTCGTGATGCTAGAGATAAAAACTCGTAAAGCTTACGGTATTACATGGTTGTTTGTATGATGTCCCACATTGGCTAGGAAGGAGAGAACAAAACACCATTTATAAGAGTGTGGAAACTTTCTCCTAGCAGACGGATTTTAAAGCTTGCTCAGAAGGAAAAGTCT

mRNA sequence

CGAAGTCACTTTTGCCGGGTGCTGCTTGCCTGAGGGGTTTTCTTGGCGAGAAAGTTTTTTCGCGGCTCCGCTGCTATATTCTTCGAGCTCTCAATATCCATTTCCCCCCACAGATCCTGAACCCGTTGAAGCCCTAATTCATCTGAATCAGAAGCCATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCTTATTTCAAGTCGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTTCCGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGCTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGCTTTTGAACTGGTCATTATCCGTCCTTTAAATTATTTTTCTCTTCCTTCTGAGTTTTCTTTAGTGGCAATGGTTTTGGGCATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATTGAGGTGGGAGTGGTTCGGTCGGAGAATCCCATCTTCAGAGTATTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGATTGACGCAAACCTCTCCGGACAAGCATATTGAGAACGTCTAACGACTTCGTTTCAGATGTCGGTTATCGCTGAGTTGCGTGCTTTATATATGCAGGTCCTTGAGGTAGTAGTAGTTGTACTTGCTTCTGAATTGCTGTAGACGGTGACATTCCCATTTTACTTAAACACTACATCAAAAACAAGTCATCTTTAGAATTTGTATCTCAGAGAAACTCGTCATGTTACATTATTTAACTCCCAATTCCCGTGTCTAATAACATGATGGTAAGTAGATTATGAACCCTCTTTCTCTATTTCTCGTGATGCTAGAGATAAAAACTCGTAAAGCTTACGGTATTACATGGTTGTTTGTATGATGTCCCACATTGGCTAGGAAGGAGAGAACAAAACACCATTTATAAGAGTGTGGAAACTTTCTCCTAGCAGACGGATTTTAAAGCTTGCTCAGAAGGAAAAGTCT

Coding sequence (CDS)

ATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCTTATTTCAAGTCGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTTCCGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGCTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGCTTTTGAACTGGTCATTATCCGTCCTTTAAATTATTTTTCTCTTCCTTCTGAGTTTTCTTTAGTGGCAATGGTTTTGGGCATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATTGAGGTGGGAGTGGTTCGGTCGGAGAATCCCATCTTCAGAGTATTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGA

Protein sequence

MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRSENPIFRVLSTEEVDEHLTAISERD

Homology

[Close]

BLAST of Carg18975 vs. NCBI nr
Match: XP_022953432.1 (proteasome subunit alpha type-6 [Cucurbita moschata] >XP_022992374.1 proteasome subunit alpha type-6 [Cucurbita maxima])

HSP 1 Score: 475.7 bits (1223), Expect = 1.0e-130
Identity = 246/267 (92.13%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDEFGPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEFGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRSENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 VRSENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. NCBI nr
Match: XP_023549157.1 (proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.4 bits (1217), Expect = 5.1e-130
Identity = 245/267 (91.76%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDEFGPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEFGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 VRVENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. NCBI nr
Match: XP_023000291.1 (proteasome subunit alpha type-6-like [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 6.7e-130
Identity = 243/267 (91.01%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRSENPIF+VLSTEE+DEHLTAISERD
Sbjct: 241 VRSENPIFKVLSTEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. NCBI nr
Match: XP_022151687.1 (proteasome subunit alpha type-6-like [Momordica charantia])

HSP 1 Score: 472.2 bits (1214), Expect = 1.1e-129
Identity = 243/267 (91.01%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQ+YTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQIYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRSENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 VRSENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. NCBI nr
Match: XP_023515312.1 (proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 1.9e-129
Identity = 242/267 (90.64%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRSENPIF+VLSTEE++EHLTAISERD
Sbjct: 241 VRSENPIFKVLSTEEIEEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TAIR10
Match: AT2G05840.1 (20S proteasome subunit PAA2)

HSP 1 Score: 432.6 bits (1111), Expect = 1.8e-121
Identity = 217/267 (81.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQ+SV+HLF +TKYLGLLATG+TAD+RSLVQQARNEAAEFRF+YGYEMP D+LAKWIAD
Sbjct: 61  LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGID+E GP LYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDEERGPLLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           F+GHKATSAG+KEQEA+NFLEKKMK +PAFTY+ETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 FYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR+++P+FR L TEE+DEHLTAISERD
Sbjct: 241 VRADDPLFRSLRTEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TAIR10
Match: AT5G35590.1 (proteasome alpha subunit A1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.1e-121
Identity = 216/267 (80.90%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQ+SVTHLF ITKY+GL+ATGITADARSLVQQARN+AAEFRF YGYEMPVD+LAKWIAD
Sbjct: 61  LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMV+G+D+E GP LYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVMGVDEENGPLLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           F+GHKATSAG+KEQEA+NFLEKKMK +P+FT++ETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 FYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR+ENP FR L+TEE++EHLTAISERD
Sbjct: 241 VRAENPEFRALTTEEIEEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TAIR10
Match: AT1G16470.1 (proteasome subunit PAB1)

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-33
Identity = 83/255 (32.55%), Postives = 139/255 (54.51%), Query Frame = 0


Query: 9   YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTH 68
           Y   +T FSP G+L Q+E+A  AV S G TS+G+K  + V + T+KK+P  L+D+ SV  
Sbjct: 6   YSFSLTTFSPSGKLVQIEHALTAVGS-GQTSLGIKASNGVVIATEKKLPSILVDEASVQK 65

Query: 69  LFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 128
           +  +T  +G++ +G+  D R LV+++R +A ++   Y   +PV  L +  A   Q +TQ 
Sbjct: 66  IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 125

Query: 129 AYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGHFFGHKATS 188
             +RP GV+                      +V G DD+ GP+LY+ DP+G +F  KA++
Sbjct: 126 GGVRPFGVSL---------------------LVAGYDDK-GPQLYQVDPSGSYFSWKASA 185

Query: 189 AGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRSENPIF 248
            G     A  FLEK+   D     ++ + TAI  L+   + +  +  IE+G + ++  +F
Sbjct: 186 MGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADK-VF 234

Query: 249 RVLSTEEVDEHLTAI 264
           RVL+  E+D++L  +
Sbjct: 246 RVLTPAEIDDYLAEV 234

[Close]

BLAST of Carg18975 vs. TAIR10
Match: AT1G79210.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 5.4e-33
Identity = 83/255 (32.55%), Postives = 138/255 (54.12%), Query Frame = 0


Query: 9   YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTH 68
           Y   +T FSP G+L Q+E+A  AV S G TS+G+K  + V + T+KK+P  L+D+ SV  
Sbjct: 6   YSFSLTTFSPSGKLVQIEHALTAVGS-GQTSLGIKASNGVVIATEKKLPSILVDEASVQK 65

Query: 69  LFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 128
           +  +T  +G + +G+  D R LV+++R +A ++   Y   +PV  L +  A   Q +TQ 
Sbjct: 66  IQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 125

Query: 129 AYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGHFFGHKATS 188
             +RP GV+                      +V G DD+ GP+LY+ DP+G +F  KA++
Sbjct: 126 GGVRPFGVSL---------------------LVAGYDDK-GPQLYQVDPSGSYFSWKASA 185

Query: 189 AGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRSENPIF 248
            G     A  FLEK+   D     ++ + TAI  L+   + +  +  IE+G + ++  +F
Sbjct: 186 MGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDK-VF 234

Query: 249 RVLSTEEVDEHLTAI 264
           RVL+  E+D++L  +
Sbjct: 246 RVLTPAEIDDYLAEV 234

[Close]

BLAST of Carg18975 vs. TAIR10
Match: AT3G51260.1 (20S proteasome alpha subunit PAD1)

HSP 1 Score: 135.2 bits (339), Expect = 6.0e-32
Identity = 87/249 (34.94%), Postives = 124/249 (49.80%), Query Frame = 0


Query: 9   YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTH 68
           YDR IT+FSP+G LFQVEYA +AV+  G  ++GV+G D+V +  +KK   KL D  S   
Sbjct: 4   YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 63

Query: 69  LFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 128
           + S+  ++ L   G+ ADAR L+ +AR E    R      + V+ + ++IA   Q YTQ 
Sbjct: 64  IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 123

Query: 129 AYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGHFFGHKATS 188
             +RP G++  +V   P                        P LY+ DP+G F   KA +
Sbjct: 124 GGVRPFGLSTLIVGFDPYTRI--------------------PALYQTDPSGTFSAWKANA 183

Query: 189 AGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRSENPIF 248
            G        FLEK  K       +ETV+ AI AL  V++   K   IEV V+  E  + 
Sbjct: 184 TGRNSNSIREFLEKNYKESAG---QETVKLAIRALLEVVESGGK--NIEVAVMTREEGVL 226

Query: 249 RVLSTEEVD 258
           + L  EE+D
Sbjct: 244 KQLEEEEID 226

[Close]

BLAST of Carg18975 vs. Swiss-Prot
Match: sp|Q9XG77|PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum OX=4097 GN=PAA1 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 6.3e-124
Identity = 225/267 (84.27%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSV+HLF ITKYLGLLATG+TADAR+LVQQARNEAAEFRF+YGYEMPVDVL+KWIAD
Sbjct: 61  LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAM+LGID+E GP+L+KCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMILGIDEEKGPQLFKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAG KEQEAINFLEKKMKNDPAF+YEETVQTAISALQSVLQEDFKA+EIEVGV
Sbjct: 181 FFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           V+ E+PIFRVL+TEE+DEHLTAISERD
Sbjct: 241 VKKEDPIFRVLTTEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. Swiss-Prot
Match: sp|O48551|PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max OX=3847 GN=PAA1 PE=2 SV=2)

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-123
Identity = 224/267 (83.90%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDS+CVVT KKVPDKL
Sbjct: 1   MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LD TSVTHLF ITKYLGLLATG+TADAR+LVQQARNEAAEFRF YGYEMPVDVLAKWIAD
Sbjct: 61  LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GP+LYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPQLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           +FGHKATSAGLK+QEAINFLEKKMKNDP+FTYEETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 YFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR +NP FRVL+T+E+DEHLTAISERD
Sbjct: 241 VRKDNPEFRVLTTDEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. Swiss-Prot
Match: sp|O81147|PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.3e-120
Identity = 217/267 (81.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQ+SV+HLF +TKYLGLLATG+TAD+RSLVQQARNEAAEFRF+YGYEMP D+LAKWIAD
Sbjct: 61  LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGID+E GP LYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDEERGPLLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           F+GHKATSAG+KEQEA+NFLEKKMK +PAFTY+ETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 FYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR+++P+FR L TEE+DEHLTAISERD
Sbjct: 241 VRADDPLFRSLRTEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. Swiss-Prot
Match: sp|O81146|PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=2)

HSP 1 Score: 431.8 bits (1109), Expect = 5.6e-120
Identity = 216/267 (80.90%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQ+SVTHLF ITKY+GL+ATGITADARSLVQQARN+AAEFRF YGYEMPVD+LAKWIAD
Sbjct: 61  LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMV+G+D+E GP LYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVMGVDEENGPLLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           F+GHKATSAG+KEQEA+NFLEKKMK +P+FT++ETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 FYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR+ENP FR L+TEE++EHLTAISERD
Sbjct: 241 VRAENPEFRALTTEEIEEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. Swiss-Prot
Match: sp|Q9LSU3|PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica OX=39947 GN=PAA1 PE=2 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 2.9e-116
Identity = 212/267 (79.40%), Postives = 232/267 (86.89%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVKSAG+TSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LD TSVTHLF ITKY+GLLATG+TADARSLV QARNEAAEFRF++GYEMPVDVLAKWIAD
Sbjct: 61  LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           K+QVYTQHAYMRPLGV                     VAMVLG D+E   +L+KCDPAGH
Sbjct: 121 KAQVYTQHAYMRPLGV---------------------VAMVLGYDEEKNAQLFKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMK+DP F+YEETVQ AISALQSVLQEDFKA EIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR ++ +FR L+TEE+D+HLTAISERD
Sbjct: 241 VRKDDRVFRALTTEEIDQHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TrEMBL
Match: tr|A0A1S3CGN3|A0A1S3CGN3_CUCME (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103500682 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.9e-129
Identity = 242/267 (90.64%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAA+FRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAADFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRSENPIFRVL+TEEVDEHLTAISERD
Sbjct: 241 VRSENPIFRVLTTEEVDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TrEMBL
Match: tr|A0A2P4I7S8|A0A2P4I7S8_QUESU (Proteasome subunit alpha type OS=Quercus suber OX=58331 GN=CFP56_18851 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.7e-127
Identity = 235/267 (88.01%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLF ITKYLGLLATG+TADAR+LVQQARNEAAEFRFRYGYEMPVDVL+KWIAD
Sbjct: 61  LDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLSKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR++NP+FRVLSTEE+DEHLTAISERD
Sbjct: 241 VRTDNPVFRVLSTEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TrEMBL
Match: tr|A0A0A0KAT0|A0A0A0KAT0_CUCSA (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_7G448880 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 5.9e-127
Identity = 237/267 (88.76%), Postives = 244/267 (91.39%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKG+DSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGRDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRF+YGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFQYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRL+KCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLFKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTY+ETVQTAISALQSVLQEDFKA EIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYDETVQTAISALQSVLQEDFKATEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VRS+NPIFRVL+TEEVDEHLTAISERD
Sbjct: 241 VRSDNPIFRVLTTEEVDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TrEMBL
Match: tr|A0A2I4FTS6|A0A2I4FTS6_9ROSI (Proteasome subunit alpha type OS=Juglans regia OX=51240 GN=LOC109001970 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.0e-126
Identity = 235/267 (88.01%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSV+HLF ITKYLGLLATG+TADAR+LVQQARNEAAEFRFRYGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDEFGPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEFGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR +NP+FRVLS EE+DEHLTAISERD
Sbjct: 241 VRQDNPVFRVLSMEEIDEHLTAISERD 246

[Close]

BLAST of Carg18975 vs. TrEMBL
Match: tr|A0A2I4G5M0|A0A2I4G5M0_9ROSI (Proteasome subunit alpha type OS=Juglans regia OX=51240 GN=LOC109004953 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.0e-126
Identity = 233/267 (87.27%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK++GITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITADARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 120
           LDQTSVTHLF ITKYLGLLATG+TAD R+LVQQARNEAAEFRF+YGYEMPVDVLAKWIAD
Sbjct: 61  LDQTSVTHLFPITKYLGLLATGMTADVRTLVQQARNEAAEFRFKYGYEMPVDVLAKWIAD 120

Query: 121 KSQVYTQHAYMRPLGVAFELVIIRPLNYFSLPSEFSLVAMVLGIDDEFGPRLYKCDPAGH 180
           KSQVYTQHAYMRPLGV                     VAMVLGIDDE+GPRLYKCDPAGH
Sbjct: 121 KSQVYTQHAYMRPLGV---------------------VAMVLGIDDEYGPRLYKCDPAGH 180

Query: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240
           FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV
Sbjct: 181 FFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGV 240

Query: 241 VRSENPIFRVLSTEEVDEHLTAISERD 268
           VR ENP+FRVLS EE+DEHLTAISERD
Sbjct: 241 VRQENPVFRVLSMEEIDEHLTAISERD 246

The following BLAST results are available for this feature:

BLAST of Carg18975 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953432.1	1.0e-130	92.13	proteasome subunit alpha type-6 [Cucurbita moschata] >XP_022992374.1 proteasome ...	[more]
XP_023549157.1	5.1e-130	91.76	proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo]	[more]
XP_023000291.1	6.7e-130	91.01	proteasome subunit alpha type-6-like [Cucurbita maxima]	[more]
XP_022151687.1	1.1e-129	91.01	proteasome subunit alpha type-6-like [Momordica charantia]	[more]
XP_023515312.1	1.9e-129	90.64	proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18975 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G05840.1	1.8e-121	81.27	20S proteasome subunit PAA2	[more]
AT5G35590.1	3.1e-121	80.90	proteasome alpha subunit A1	[more]
AT1G16470.1	3.2e-33	32.55	proteasome subunit PAB1	[more]
AT1G79210.1	5.4e-33	32.55	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G51260.1	6.0e-32	34.94	20S proteasome alpha subunit PAD1	[more]

BLAST of Carg18975 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XG77\|PSA6_TOBAC	6.3e-124	84.27	Proteasome subunit alpha type-6 OS=Nicotiana tabacum OX=4097 GN=PAA1 PE=2 SV=1	[more]
sp\|O48551\|PSA6_SOYBN	1.1e-123	83.90	Proteasome subunit alpha type-6 OS=Glycine max OX=3847 GN=PAA1 PE=2 SV=2	[more]
sp\|O81147\|PSA6B_ARATH	3.3e-120	81.27	Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 S...	[more]
sp\|O81146\|PSA6A_ARATH	5.6e-120	80.90	Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 S...	[more]
sp\|Q9LSU3\|PSA6_ORYSJ	2.9e-116	79.40	Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica OX=39947 GN=PAA1...	[more]

BLAST of Carg18975 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CGN3\|A0A1S3CGN3_CUCME	2.9e-129	90.64	Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103500682 PE=3 SV=1	[more]
tr\|A0A2P4I7S8\|A0A2P4I7S8_QUESU	2.7e-127	88.01	Proteasome subunit alpha type OS=Quercus suber OX=58331 GN=CFP56_18851 PE=3 SV=1	[more]
tr\|A0A0A0KAT0\|A0A0A0KAT0_CUCSA	5.9e-127	88.76	Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_7G448880 PE=3 SV...	[more]
tr\|A0A2I4FTS6\|A0A2I4FTS6_9ROSI	1.0e-126	88.01	Proteasome subunit alpha type OS=Juglans regia OX=51240 GN=LOC109001970 PE=3 SV=...	[more]
tr\|A0A2I4G5M0\|A0A2I4G5M0_9ROSI	5.0e-126	87.27	Proteasome subunit alpha type OS=Juglans regia OX=51240 GN=LOC109004953 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005839	proteasome core complex
GO:0019773	proteasome core complex, alpha-subunit complex

Vocabulary: **Biological Process**
Term	Definition
GO:0051603	proteolysis involved in cellular protein catabolic process
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004298	threonine-type endopeptidase activity
GO:0004175	endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023332	Proteasome_alpha-type
IPR034642	Proteasome_subunit_alpha6
IPR001353	Proteasome_sua/b
IPR029055	Ntn_hydrolases_N
IPR000426	Proteasome_asu_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0004175	endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18975-RA	Carg18975-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000426	Proteasome alpha-subunit, N-terminal domain	SMART	SM00948	Proteasome_A_N_2	coord: 9..31 e-value: 1.1E-11 score: 54.8
IPR000426	Proteasome alpha-subunit, N-terminal domain	PFAM	PF10584	Proteasome_A_N	coord: 9..31 e-value: 1.1E-15 score: 56.8
IPR000426	Proteasome alpha-subunit, N-terminal domain	PROSITE	PS00388	PROTEASOME_ALPHA_1	coord: 9..31
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	G3DSA:3.60.20.10		coord: 1..267 e-value: 8.5E-88 score: 295.8
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 8..266
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 155..241 e-value: 5.4E-17 score: 61.8 coord: 35..139 e-value: 2.7E-30 score: 105.2
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 7..267
IPR034642	Proteasome subunit alpha6	PANTHER	PTHR11599:SF11	PROTEASOME SUBUNIT ALPHA TYPE-6	coord: 7..267
IPR034642	Proteasome subunit alpha6	CDD	cd03754	proteasome_alpha_type_6	coord: 8..241 e-value: 1.52665E-144 score: 406.235
IPR023332	Proteasome alpha-type subunit	PROSITE	PS51475	PROTEASOME_ALPHA_2	coord: 24..260 score: 78.152

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18975	Cla015537	Watermelon (97103) v1	carwmB0763
Carg18975	Cla012532	Watermelon (97103) v1	carwmB0764
Carg18975	Csa7G448880	Cucumber (Chinese Long) v2	carcuB0787
Carg18975	MELO3C024343	Melon (DHL92) v3.5.1	carmeB0762
Carg18975	ClCG07G014530	Watermelon (Charleston Gray)	carwcgB0743
Carg18975	ClCG09G001080	Watermelon (Charleston Gray)	carwcgB0741
Carg18975	CSPI07G22420	Wild cucumber (PI 183967)	carcpiB0805
Carg18975	Cucsa.360140	Cucumber (Gy14) v1	carcgyB0869
Carg18975	CmaCh08G008060	Cucurbita maxima (Rimu)	carcmaB1064
Carg18975	CmaCh14G011970	Cucurbita maxima (Rimu)	carcmaB1062
Carg18975	CmaCh17G006790	Cucurbita maxima (Rimu)	carcmaB1063
Carg18975	CmoCh14G012210	Cucurbita moschata (Rifu)	carcmoB1036
Carg18975	CmoCh08G007770	Cucurbita moschata (Rifu)	carcmoB1039
Carg18975	CmoCh17G006580	Cucurbita moschata (Rifu)	carcmoB1037
Carg18975	Lsi02G028890	Bottle gourd (USVL1VR-Ls)	carlsiB704
Carg18975	Lsi07G006640	Bottle gourd (USVL1VR-Ls)	carlsiB705
Carg18975	Cp4.1LG17g04120	Cucurbita pepo (Zucchini)	carcpeB1076
Carg18975	Cp4.1LG12g09260	Cucurbita pepo (Zucchini)	carcpeB1075
Carg18975	Cp4.1LG03g15040	Cucurbita pepo (Zucchini)	carcpeB1077
Carg18975	CsGy7G020700	Cucumber (Gy14) v2	carcgybB0764
Carg18975	MELO3C024343.2	Melon (DHL92) v3.6.1	carmedB0776
Carg18975	CsaV3_7G034340	Cucumber (Chinese Long) v3	carcucB0808
Carg18975	Cla97C07G141390	Watermelon (97103) v2	carwmbB0801
Carg18975	Cla97C09G163120	Watermelon (97103) v2	carwmbB0802
Carg18975	Bhi09G000255	Wax gourd	carwgoB0901

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18975	Carg13929	Silver-seed gourd	carcarB540

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18975	Cucumber (Gy14) v2	carcgybB0762
Carg18975	Cucumber (Gy14) v1	carcgyB0868
Carg18975	Cucurbita moschata (Rifu)	carcmoB1038
Carg18975	Wild cucumber (PI 183967)	carcpiB0803
Carg18975	Cucumber (Chinese Long) v2	carcuB0785
Carg18975	Cucumber (Chinese Long) v3	carcucB0806
Carg18975	Melon (DHL92) v3.5.1	carmeB0763
Carg18975	Melon (DHL92) v3.6.1	carmedB0777
Carg18975	Wax gourd	carwgoB0900