Carg18893 (gene) Silver-seed gourd

Overview
NameCarg18893
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGPI-anchored adhesin-like protein
LocationCucurbita_argyrosperma_scaffold_162 : 306283 .. 307349 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAGGACGAAAGAATACCAAACTCCTCTGAGAGATCAAGCTGCGAATCGTAGATCAAAGAAGCCTCTGAAGGTACAGTTTCTTTTGTCTGTTCTTCTCATCTTTCTCATTCTCTAGCTTAATCTCTCGTTCGTTCTGCTGCAATTAAGATCACCAAGAGTTTGACTGCCACATTTTCATCATTTTGCGACGATAAAATCCAGCCAATTTCGAAGGAAGACTTTTCTCCGATTTCCGTTGTCTCAAACATCAGTCAAATTCCTGATATCGACAGTGTAAGTTCCGATTCATTTGTGATTTTTGGACGATCTGTTCGATTTAACTTTTCATTTTTGCTGTGTCTCCGTGCTGTATCTGCGTTATTTTTTATTTCTTTTATTAGTTGATCTCAATTTGGGGCCCATTCATACTGAGAAGAAGATTTGTTATCTATTATTTGCTCAAGTCATATTCGTTTTTTTTCTCCGCCTATAATCTACTGCGACTAGAGTGTTCACTTTGAAATTTAATGTATGGTCAAGCAACGAAACAAAGTATATTTGATTTATGGCACTGGAATATGATTGATTTCAAATTTTTCTGGTTTTCTAAGTTAGTTTTCTCTATTTCAGAGTTTCTTGCAAGATGTCAATCCAGCTCTTTCAGTTTCCTGCGAGAGCTCGCTTTTCCCCGAACTTTCTCCATCTTCAGTTGTTACTTTTGACAATAAGCAGCTTGACAAGGTTCCAGTTAATTTTGGTGGATCTAATAATTTAGATGAAGCAAGCGCGGGTTCAGTGGAGGCGGAGATTGCCGTGAATTACTTAAGGCGTGCTCTTAGTCAAGTCTTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTGATAGATGCATCCGTGAGGATCATTGTGGACGAATTTCTCGCCATACCTCAAGAGAGAGACCTGATTACTCGGCTTATTTCTTCCAAAAGTCATGTTCTGTCTCTAGGTTTATTCCTATGGATCATCGTCTTGGTATTTGCTTTCTTTTCTGGTTCGGGAGTCGAGAACTGTTTCATTGGTCCACTGCCAACTTAA

mRNA sequence

ATGGAGAAAAGGACGAAAGAATACCAAACTCCTCTGAGAGATCAAGCTGCGAATCGTAGATCAAAGAAGCCTCTGAAGATCACCAAGAGTTTGACTGCCACATTTTCATCATTTTGCGACGATAAAATCCAGCCAATTTCGAAGGAAGACTTTTCTCCGATTTCCGTTGTCTCAAACATCAGTCAAATTCCTGATATCGACAGTAGTTTCTTGCAAGATGTCAATCCAGCTCTTTCAGTTTCCTGCGAGAGCTCGCTTTTCCCCGAACTTTCTCCATCTTCAGTTGTTACTTTTGACAATAAGCAGCTTGACAAGGTTCCAGTTAATTTTGGTGGATCTAATAATTTAGATGAAGCAAGCGCGGGTTCAGTGGAGGCGGAGATTGCCGTGAATTACTTAAGGCGTGCTCTTAGTCAAGTCTTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTGATAGATGCATCCGTGAGGATCATTGTGGACGAATTTCTCGCCATACCTCAAGAGAGAGACCTGATTACTCGGCTTATTTCTTCCAAAAGTCATGTTCTGTCTCTAGGTTTATTCCTATGGATCATCGTCTTGGTATTTGCTTTCTTTTCTGGTTCGGGAGTCGAGAACTGTTTCATTGGTCCACTGCCAACTTAA

Coding sequence (CDS)

ATGGAGAAAAGGACGAAAGAATACCAAACTCCTCTGAGAGATCAAGCTGCGAATCGTAGATCAAAGAAGCCTCTGAAGATCACCAAGAGTTTGACTGCCACATTTTCATCATTTTGCGACGATAAAATCCAGCCAATTTCGAAGGAAGACTTTTCTCCGATTTCCGTTGTCTCAAACATCAGTCAAATTCCTGATATCGACAGTAGTTTCTTGCAAGATGTCAATCCAGCTCTTTCAGTTTCCTGCGAGAGCTCGCTTTTCCCCGAACTTTCTCCATCTTCAGTTGTTACTTTTGACAATAAGCAGCTTGACAAGGTTCCAGTTAATTTTGGTGGATCTAATAATTTAGATGAAGCAAGCGCGGGTTCAGTGGAGGCGGAGATTGCCGTGAATTACTTAAGGCGTGCTCTTAGTCAAGTCTTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTGATAGATGCATCCGTGAGGATCATTGTGGACGAATTTCTCGCCATACCTCAAGAGAGAGACCTGATTACTCGGCTTATTTCTTCCAAAAGTCATGTTCTGTCTCTAGGTTTATTCCTATGGATCATCGTCTTGGTATTTGCTTTCTTTTCTGGTTCGGGAGTCGAGAACTGTTTCATTGGTCCACTGCCAACTTAA

Protein sequence

MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEASAGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT
Homology
[Close]
BLAST of Carg18893 vs. NCBI nr
Match: XP_022930352.1 (uncharacterized protein LOC111436822 [Cucurbita moschata])

HSP 1 Score: 405.2 bits (1040), Expect = 1.4e-109
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPI KEDFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           SKSHVLSLGLFLWIIVLV AFFSGSGVENCFIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]
BLAST of Carg18893 vs. NCBI nr
Match: XP_022999957.1 (uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999958.1 uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999959.1 uncharacterized protein LOC111494286 [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-107
Identity = 212/217 (97.70%), Postives = 213/217 (98.16%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPI KEDFSPISVVSNI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFG SNNLDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGESNNLDEAS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGSVEAEIAVNYLRRAL QVLQSTDVDHQSKKLIDASVRIIVD+FLAIPQERDLITRLIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           SKSHVLSLGLFLWIIVLV AFFSGSGVENCFIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]
BLAST of Carg18893 vs. NCBI nr
Match: XP_023514806.1 (uncharacterized protein LOC111779010 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 3.2e-106
Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPI KEDFSPISVV NI
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVPNI 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           +QIPDID+SFLQDVNPALSVSCESSLFPEL PSSVVTFDNKQLDKVPVNFGGSNNLDEAS
Sbjct: 61  NQIPDIDTSFLQDVNPALSVSCESSLFPELFPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGSVEAEIAVNYLRRAL QVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           SKSHVLSLGLFLWIIVLV AFFSG GVENCFIGPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGLGVENCFIGPLPT 217

[Close]
BLAST of Carg18893 vs. NCBI nr
Match: XP_022959315.1 (uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78
Identity = 162/217 (74.65%), Postives = 184/217 (84.79%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           ME+R K+ QTP RDQAANRRS+KPLKI K LTATFSS  DDKIQ  SK+DFS ISVVS++
Sbjct: 1   MERRMKDSQTPQRDQAANRRSRKPLKIAKCLTATFSSLSDDKIQRSSKQDFSSISVVSDV 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           +QIPDID SFL DVNPALS  C SSL P+LSPSSVVTFDN QLDKVPVNF GSN+LDE  
Sbjct: 61  NQIPDIDRSFLHDVNPALSACCGSSLIPDLSPSSVVTFDNGQLDKVPVNFSGSNDLDETG 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGSV AEIAV+ L RAL+QVLQSTDVDHQ+KKLIDAS+RIIVD+FLAIPQ+RD I ++IS
Sbjct: 121 AGSVGAEIAVSSLSRALTQVLQSTDVDHQAKKLIDASIRIIVDDFLAIPQDRDHIFQIIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           +K+ VLS+ LFLWIIVL  AFF  S V++ FIGPLPT
Sbjct: 181 AKNQVLSISLFLWIIVLALAFFFNSEVKSSFIGPLPT 217

[Close]
BLAST of Carg18893 vs. NCBI nr
Match: XP_022138735.1 (uncharacterized protein LOC111009828 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 7.7e-76
Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPIS EDFSPI  VS+I
Sbjct: 1   MEKRMKEYQTPQRDPAANRRSRKPQKIAKSLAATFSSLSDDKVQPISMEDFSPIYEVSDI 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           +Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N+Q DK+PVNF GSN+L + S
Sbjct: 61  NQVPDMDRSFLQVVNPALSASFESSFFPDLSPSSVVTAENEQTDKIPVNFAGSNDLVKGS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           A SVEAEIAV++LRRALSQVLQSTDVDHQSKKL+DAS+RIIV++F+AIPQE+D I +LIS
Sbjct: 121 ACSVEAEIAVDFLRRALSQVLQSTDVDHQSKKLLDASMRIIVEDFVAIPQEQDHIAQLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           +KS VLSL  FLWII+L  AFF GSG ++ F GP PT
Sbjct: 181 AKSLVLSLCFFLWIIILALAFFFGSGAKSSFSGPPPT 217

[Close]
BLAST of Carg18893 vs. TrEMBL
Match: tr|A0A1S4E1Y8|A0A1S4E1Y8_CUCME (uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.3e-75
Identity = 154/217 (70.97%), Postives = 185/217 (85.25%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKR K++QTP R+Q  NRRS+KP KI K LTA+FSS  +DKI  ISKE+ SPISVVS++
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           +QI DIDSSFLQ VNP  S  C++SLFP+LSPSSVV+FDN+ LDKV V+F GSN+++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGS+EAEIAVN LRRAL+QVL STDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
            K++VLS+ +FLWI+VL  AFF GSGV++ F GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]
BLAST of Carg18893 vs. TrEMBL
Match: tr|A0A0A0KI59|A0A0A0KI59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327950 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 147/217 (67.74%), Postives = 177/217 (81.57%), Query Frame = 0 

Query: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPISKEDFSPISVVSNI 60
           MEKR K++QTP R+Q  NR S+KP KI K  +AT  S  +DKI  ISKE+ SPIS VS++
Sbjct: 1   MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDL 60

Query: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120
           +QI DI SSFLQ VNP  S  C++SLFP+LS SSVV+FDN+ LDKV  +F GSN+++EAS
Sbjct: 61  NQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDNELLDKVSADFSGSNDINEAS 120

Query: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180
           AGSVEAEIAVN++RRAL+QVLQSTDVDHQSKKLIDAS+RII D+FLAIPQ+RD I +LIS
Sbjct: 121 AGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLIS 180

Query: 181 SKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           +K HVL + +FLWIIVL  AFF GSGVE+ F GPLPT
Sbjct: 181 AKYHVLCVCVFLWIIVLAKAFFVGSGVESSFTGPLPT 217

[Close]
BLAST of Carg18893 vs. TrEMBL
Match: tr|A0A2N9E5Q7|A0A2N9E5Q7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2149 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.9e-29
Identity = 94/219 (42.92%), Postives = 131/219 (59.82%), Query Frame = 0 

Query: 6   KEYQTPLRDQAANRR-----SKKPLKIT-KSLTATFSSFCDDKIQPISKEDFSPISVVSN 65
           KE+QTP   + ANRR     SKK  KIT KSL A F+S  D+  +     + S IS +S+
Sbjct: 2   KEHQTP---ELANRRSKDSSSKKLQKITKKSLNAVFTSVSDESSK--DSVELSSISEISD 61

Query: 66  ISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEA 125
            +   +I  SF  +++P  S S ES L  +L+PSS VT +N + +K+             
Sbjct: 62  SNHTGEIAQSFSMEMSPDFSASSESLLPSDLTPSSTVTTENNEPEKL------------- 121

Query: 126 SAGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLA-IPQERDLITRL 185
              S+E EI V++L+R+ SQ+L S +VD QSKKL+DA +RIIVDEF A  P++ D I  L
Sbjct: 122 ---SLEVEIVVDFLKRSRSQILNSVEVDSQSKKLLDALLRIIVDEFYAHQPEKTDRIAEL 181

Query: 186 ISSKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           IS K+ ++ L   +WIIV+   FF  S V+N F+GPLPT
Sbjct: 182 ISMKTKIVLLSFLVWIIVMAMTFFFSSRVQNSFVGPLPT 199

[Close]
BLAST of Carg18893 vs. TrEMBL
Match: tr|A0A2I4F1V0|A0A2I4F1V0_9ROSI (uncharacterized protein LOC108994758 OS=Juglans regia OX=51240 GN=LOC108994758 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27
Identity = 93/228 (40.79%), Postives = 128/228 (56.14%), Query Frame = 0 

Query: 2   EKRTKEYQTPLRDQA-----ANRRSKK------PLKITKSLTATFSSFCDDKIQ-PISKE 61
           +   KE  TP ++QA      +RRSK+      P  + KSL A F+S  +D  Q P+   
Sbjct: 23  QSEMKEVPTPRKEQARPSEHLDRRSKESSSKKLPKTVKKSLNAAFTSLSEDVTQSPMESL 82

Query: 62  DFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVN 121
           D   IS ++    I   + SFL  VNPALS S ES     L+PSS VT D ++   +   
Sbjct: 83  DLFSISEIAGSDHIG--EESFLMAVNPALSASSESLGTSALTPSSTVTVDMEESGHLHET 142

Query: 122 FGGSNNLDEASAGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIP 181
           F     L  +   SVEAEIAV++L+R+ SQVL+S DVD QSK+++DA + I++DEF    
Sbjct: 143 F----ELGGSKISSVEAEIAVDFLKRSRSQVLKSADVDPQSKRIMDALIEIVIDEFHFRQ 202

Query: 182 QERDLITRLISSKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           +E+D    LI  K+ +L L  FLWI+ +   FF GS  +N   GPLPT
Sbjct: 203 EEKDHFAELIIMKTQILLLCFFLWILAVAVVFFFGSANQNTSSGPLPT 244

[Close]
BLAST of Carg18893 vs. TrEMBL
Match: tr|A0A2P4MS46|A0A2P4MS46_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_36014 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26
Identity = 88/218 (40.37%), Postives = 123/218 (56.42%), Query Frame = 0 

Query: 6   KEYQTPLRDQAANRR-----SKKPLKIT-KSLTATFSSFCDDKIQPISKEDFSPISVVSN 65
           KE+Q P   + ANRR      KK  K+T K+L A F+S  D+     SK++ S IS +S 
Sbjct: 2   KEHQKP---ELANRRFKDSSLKKLQKVTKKNLNAVFTSVSDES----SKDELSSISEISE 61

Query: 66  ISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEA 125
                DI  SF   +      S ES L  +L+PSS VT +N +  K+  N    + LD +
Sbjct: 62  SIHAGDITDSFSMAMXXXXXXSSESLLPSDLTPSSTVTAENDEPGKLATNLYRPSELDSS 121

Query: 126 SAGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLI 185
              SVE +I V++L++A S+ L S DVD +SKKL+DA + IIVDEF A P+++D    LI
Sbjct: 122 KNRSVEVKIVVDFLKKARSRALNSVDVDTRSKKLLDALLSIIVDEFYAQPEKKDRFAELI 181

Query: 186 SSKSHVLSLGLFLWIIVLVFAFFSGSGVENCFIGPLPT 218
           + K+ ++ L    WI+ +   FF  S VEN F GP PT
Sbjct: 182 AMKTKIVLLCFVFWILAMAVTFFFSSRVENSFRGPPPT 212

The following BLAST results are available for this feature:
BLAST of Carg18893 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022930352.11.4e-10999.08uncharacterized protein LOC111436822 [Cucurbita moschata][more]
XP_022999957.11.3e-10797.70uncharacterized protein LOC111494286 [Cucurbita maxima] >XP_022999958.1 uncharac... [more]
XP_023514806.13.2e-10696.31uncharacterized protein LOC111779010 [Cucurbita pepo subsp. pepo][more]
XP_022959315.13.7e-7874.65uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata][more]
XP_022138735.17.7e-7672.81uncharacterized protein LOC111009828 [Momordica charantia][more]
BLAST of Carg18893 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg18893 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg18893 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E1Y8|A0A1S4E1Y8_CUCME4.3e-7570.97uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=... [more]
tr|A0A0A0KI59|A0A0A0KI59_CUCSA1.1e-7067.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327950 PE=4 SV=1[more]
tr|A0A2N9E5Q7|A0A2N9E5Q7_FAGSY7.9e-2942.92Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2149 PE=4 SV=1[more]
tr|A0A2I4F1V0|A0A2I4F1V0_9ROSI2.0e-2740.79uncharacterized protein LOC108994758 OS=Juglans regia OX=51240 GN=LOC108994758 P... [more]
tr|A0A2P4MS46|A0A2P4MS46_QUESU4.8e-2640.37Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_36014 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18893-RACarg18893-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18893Cla009237Watermelon (97103) v1carwmB0701
Carg18893Csa6G327950Cucumber (Chinese Long) v2carcuB0726
Carg18893MELO3C021261Melon (DHL92) v3.5.1carmeB0700
Carg18893ClCG06G004510Watermelon (Charleston Gray)carwcgB0681
Carg18893CSPI06G17750Wild cucumber (PI 183967)carcpiB0741
Carg18893CmaCh17G003740Cucurbita maxima (Rimu)carcmaB0985
Carg18893CmaCh08G012830Cucurbita maxima (Rimu)carcmaB0988
Carg18893CmoCh17G003630Cucurbita moschata (Rifu)carcmoB0958
Carg18893CmoCh08G012500Cucurbita moschata (Rifu)carcmoB0960
Carg18893Lsi09G015020Bottle gourd (USVL1VR-Ls)carlsiB641
Carg18893Cp4.1LG17g00270Cucurbita pepo (Zucchini)carcpeB0985
Carg18893Cp4.1LG12g03210Cucurbita pepo (Zucchini)carcpeB0984
Carg18893CsGy6G017350Cucumber (Gy14) v2carcgybB0702
Carg18893MELO3C021261.2Melon (DHL92) v3.6.1carmedB0713
Carg18893CsaV3_6G028540Cucumber (Chinese Long) v3carcucB0744
Carg18893Cla97C06G113930Watermelon (97103) v2carwmbB0735
Carg18893Bhi12G001736Wax gourdcarwgoB0826
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18893Wax gourdcarwgoB0828
Carg18893Silver-seed gourdcarcarB085
Carg18893Silver-seed gourdcarcarB316
Carg18893Cucumber (Gy14) v2carcgybB0700
Carg18893Cucumber (Gy14) v1carcgyB0787
Carg18893Cucumber (Gy14) v1carcgyB0788
Carg18893Cucurbita maxima (Rimu)carcmaB0984
Carg18893Cucurbita maxima (Rimu)carcmaB0987
Carg18893Cucurbita moschata (Rifu)carcmoB0957
Carg18893Cucurbita pepo (Zucchini)carcpeB0986
Carg18893Cucurbita pepo (Zucchini)carcpeB0987
Carg18893Wild cucumber (PI 183967)carcpiB0738
Carg18893Cucumber (Chinese Long) v2carcuB0723
Carg18893Cucumber (Chinese Long) v3carcucB0741
Carg18893Melon (DHL92) v3.5.1carmeB0701
Carg18893Melon (DHL92) v3.6.1carmedB0714
Carg18893Watermelon (Charleston Gray)carwcgB0680
Carg18893Watermelon (97103) v1carwmB0700
Carg18893Watermelon (97103) v2carwmbB0733
Carg18893Watermelon (97103) v2carwmbB0734