Carg18829 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18829
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WD repeat-containing protein 43
Location	Cucurbita_argyrosperma_scaffold_123 : 441711 .. 443707 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCTGGAAAACTTAGTCAAGGTCCTGTTCTGTCCATGAAGCATCCTCCGTTTGTTTCTGAATGCAGAAATATTAACAATGGGGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCAGGTGTAGCTTATTTATGGAAATTAAAGTTCCTATCAGAAGACAAGGTTAATCCGACTAAAGTCACTGTTAAAGTTAACAACGTCGAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGTATTTCTGTCCTCTCTTCCACAATACAAGGTTTAGGAGACAATGAAGTGTCAGTCCTTGTCACTCATGGCTCCATGGACCTACCGCAGCATACTGTCCTTAATATCGGTTATCCTGCAAAGGAAGACGCAAATATCGCACTTGAGAAAGAAGGTTTGACAAACTTATCATTTTGCCATTCTTTTCCTTATTTCCCCTGTGCCCCATTCTCTTACAGGTAAGTACAATGTGTATACTCTGTCACAGGTCCCCACGAGATCAAACAAGCAGTTACTTCGCCTAAAAGTAAGAAAAGCAAAAAGAAGAGAGCTGCATCTGATCTCGACAGTCAGAAAGCTGGAGATGTCAGTGATGTCGGTAAGGATTGTGTTTGAGCCATTGCCTGTGGTTCTCGAATTTCCTTTGATGGTCTACAACTCTCCAACTCTACCTTCCAAAATATGTCTGGAGCAAATAGCCTAATACTATTTTCTATCTCCACCGTTAACTTGATATCTGGTGATTGTAGGCAACGAAGATATGTCTAACGTTCTATTTAATGATGATTTAAACGAGCCAACCATGGGAGATAAACTTGCGAGTTTGAATTTAGAGGAACAGAACGAAGACGAGAACCATGAACAAGATGAACCTTCCGTCCCTGCTATCCCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACGTGCAGACGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTAATCAATTTATAACCAATCCTATCTGTTTTCGTTATCTACTAACCTTCTTTATGCTGAAACATCATATATCATCTGTTATCAGGTCATCTCAAAATCAATAGCACAACTAAATTCTTCAGATGTTCTCAAGCTTTTGCACGCTCTCATATCCATTATCCAGTCAAGGTATTCTTACCTATTTCAAGATTGTTTGATGCTCATAAATGTGTTCTTGGAATAAAAGATACCATATCAAAGTTTCATGGCTTATCTACAGAGGGGCAATTCTTGTATGCGCCATCCCTTGGCTGAGAGGTTTACTTCTTCAACATGCCAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTGAATTCTCTATATCAGGTTAGCAATGGTTTGGCTCGACACTTCCCAAATATGCAGTTCCCTCACATCCATTAATCATATGTTCTCTAGTAGATAAACACAAAATTTCCATGTATGTGCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCTGCTCTTCTGCTATCAAGTAGCTTAGACTTCCTTTACACAGGGGTAAGTGCATTCTTTTCCTTCCCACGTAACGTGGCTGAACTTGAGTTTCACCATAACCTTCTTCTTCAAGCTCTATGAGGTGAATACTCGTGTCTTCTTTCTCACAGGTCCTTGATGAGGAGGCGGAAGAAAATGATGCCATTGTACCGATTATTTACGAGGAGGACGATAGCGATGATAAGGAATCGTCGGGAGATGAAATGGAAACCGATGAAGAGGGTGGAGGAGTTGAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAAGTGGATGATGATATGAGTGAATGATGATTATGAAGCCTACAAAATCCTTTGGGATTTCATTTTTTGACCTTTGTTTATCCAAAATGAGCTTCTTCTGTAATTTTGACAAGAGTTATCCTCCTAATGAATCAGAACTATATAAACCCATTGCCCAAGTTGCAAACTTCTGTGGTTTCATTCTTTCACC

mRNA sequence

ATGAGTGCTGGAAAACTTAGTCAAGGTCCTGTTCTGTCCATGAAGCATCCTCCGTTTGTTTCTGAATGCAGAAATATTAACAATGGGGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCAGGTGTAGCTTATTTATGGAAATTAAAGTTCCTATCAGAAGACAAGGTTAATCCGACTAAAGTCACTGTTAAAGTTAACAACGTCGAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGTATTTCTGTCCTCTCTTCCACAATACAAGGTTTAGGAGACAATGAAGTGTCAGTCCTTGTCACTCATGGCTCCATGGACCTACCGCAGCATACTGTCCTTAATATCGGTTATCCTGCAAAGGAAGACGCAAATATCGCACTTGAGAAAGAAGGTCCCCACGAGATCAAACAAGCAGTTACTTCGCCTAAAAGTAAGAAAAGCAAAAAGAAGAGAGCTGCATCTGATCTCGACAGTCAGAAAGCTGGAGATGTCAGTGATGTCGGCAACGAAGATATGTCTAACGTTCTATTTAATGATGATTTAAACGAGCCAACCATGGGAGATAAACTTGCGAGTTTGAATTTAGAGGAACAGAACGAAGACGAGAACCATGAACAAGATGAACCTTCCGTCCCTGCTATCCCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACGTGCAGACGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTCATCTCAAAATCAATAGCACAACTAAATTCTTCAGATGTTCTCAAGCTTTTGCACGCTCTCATATCCATTATCCAGTCAAGAGGGGCAATTCTTGTATGCGCCATCCCTTGGCTGAGAGGTTTACTTCTTCAACATGCCAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCTGCTCTTCTGCTATCAAGTAGCTTAGACTTCCTTTACACAGGGGTCCTTGATGAGGAGGCGGAAGAAAATGATGCCATTGTACCGATTATTTACGAGGAGGACGATAGCGATGATAAGGAATCGTCGGGAGATGAAATGGAAACCGATGAAGAGGGTGGAGGAGTTGAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAAGTGGATGATGATATGAGTGAATGATGATTATGAAGCCTACAAAATCCTTTGGGATTTCATTTTTTGACCTTTGTTTATCCAAAATGAGCTTCTTCTGTAATTTTGACAAGAGTTATCCTCCTAATGAATCAGAACTATATAAACCCATTGCCCAAGTTGCAAACTTCTGTGGTTTCATTCTTTCACC

Coding sequence (CDS)

ATGAGTGCTGGAAAACTTAGTCAAGGTCCTGTTCTGTCCATGAAGCATCCTCCGTTTGTTTCTGAATGCAGAAATATTAACAATGGGGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCAGGTGTAGCTTATTTATGGAAATTAAAGTTCCTATCAGAAGACAAGGTTAATCCGACTAAAGTCACTGTTAAAGTTAACAACGTCGAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGTATTTCTGTCCTCTCTTCCACAATACAAGGTTTAGGAGACAATGAAGTGTCAGTCCTTGTCACTCATGGCTCCATGGACCTACCGCAGCATACTGTCCTTAATATCGGTTATCCTGCAAAGGAAGACGCAAATATCGCACTTGAGAAAGAAGGTCCCCACGAGATCAAACAAGCAGTTACTTCGCCTAAAAGTAAGAAAAGCAAAAAGAAGAGAGCTGCATCTGATCTCGACAGTCAGAAAGCTGGAGATGTCAGTGATGTCGGCAACGAAGATATGTCTAACGTTCTATTTAATGATGATTTAAACGAGCCAACCATGGGAGATAAACTTGCGAGTTTGAATTTAGAGGAACAGAACGAAGACGAGAACCATGAACAAGATGAACCTTCCGTCCCTGCTATCCCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACGTGCAGACGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTCATCTCAAAATCAATAGCACAACTAAATTCTTCAGATGTTCTCAAGCTTTTGCACGCTCTCATATCCATTATCCAGTCAAGAGGGGCAATTCTTGTATGCGCCATCCCTTGGCTGAGAGGTTTACTTCTTCAACATGCCAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCTGCTCTTCTGCTATCAAGTAGCTTAGACTTCCTTTACACAGGGGTCCTTGATGAGGAGGCGGAAGAAAATGATGCCATTGTACCGATTATTTACGAGGAGGACGATAGCGATGATAAGGAATCGTCGGGAGATGAAATGGAAACCGATGAAGAGGGTGGAGGAGTTGAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAAGTGGATGATGATATGAGTGAATGA

Protein sequence

MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE

Homology

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BLAST of Carg18829 vs. NCBI nr
Match: XP_022964606.1 (WD repeat-containing protein 43 isoform X1 [Cucurbita moschata])

HSP 1 Score: 669.5 bits (1726), Expect = 7.3e-189
Identity = 399/400 (99.75%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           MSAGKLS+GPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT
Sbjct: 216 MSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY
Sbjct: 276 KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 335

Query: 121 PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 180
           PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF
Sbjct: 336 PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 395

Query: 181 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 240
           NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL
Sbjct: 396 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 455

Query: 241 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 300
           LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI
Sbjct: 456 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 515

Query: 301 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 360
           MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX
Sbjct: 516 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 575

Query: 361 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 401
           XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE
Sbjct: 576 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 615

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BLAST of Carg18829 vs. NCBI nr
Match: XP_023513462.1 (WD repeat-containing protein 43 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.7 bits (1672), Expect = 1.3e-182
Identity = 379/400 (94.75%), Postives = 388/400 (97.00%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           +SAGKLS+GPVLSMKHPPFVSECRNI+NGEDSIVVLSVSVSGVAYLWKLKFLSE KV+PT
Sbjct: 216 LSAGKLSRGPVLSMKHPPFVSECRNISNGEDSIVVLSVSVSGVAYLWKLKFLSEGKVSPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KVTVKVNNVESAEE+HGSAKKNRISV+SSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY
Sbjct: 276 KVTVKVNNVESAEESHGSAKKNRISVISSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 335

Query: 121 PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 180
           PAKED NIALEKEGPHEI+QAVTSPKSKKSKKKRAASDLDSQ AGDVSDVGNED SNVLF
Sbjct: 336 PAKEDVNIALEKEGPHEIEQAVTSPKSKKSKKKRAASDLDSQTAGDVSDVGNEDTSNVLF 395

Query: 181 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 240
           NDDLNEPTMGDKLASLNLE+QNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL
Sbjct: 396 NDDLNEPTMGDKLASLNLEDQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 455

Query: 241 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 300
           LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI
Sbjct: 456 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 515

Query: 301 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 360
           MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+EAE        XXXXX
Sbjct: 516 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDKEAEENDAIVPIXXXXX 575

Query: 361 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 401
           XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE
Sbjct: 576 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 615

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BLAST of Carg18829 vs. NCBI nr
Match: XP_022964607.1 (WD repeat-containing protein 43 isoform X2 [Cucurbita moschata])

HSP 1 Score: 640.6 bits (1651), Expect = 3.6e-180
Identity = 389/400 (97.25%), Postives = 390/400 (97.50%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           MSAGKLS+GPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT
Sbjct: 216 MSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL    
Sbjct: 276 KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL---- 335

Query: 121 PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 180
                 NIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF
Sbjct: 336 ------NIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 395

Query: 181 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 240
           NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL
Sbjct: 396 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 455

Query: 241 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 300
           LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI
Sbjct: 456 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 515

Query: 301 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 360
           MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX
Sbjct: 516 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 575

Query: 361 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 401
           XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE
Sbjct: 576 XXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDDDMSE 605

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BLAST of Carg18829 vs. NCBI nr
Match: XP_023000348.1 (WD repeat-containing protein 43 [Cucurbita maxima])

HSP 1 Score: 620.5 bits (1599), Expect = 3.9e-174
Identity = 372/401 (92.77%), Postives = 378/401 (94.26%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           MSAGKLS+GPVLSMKHPPF+SECRN+NNGEDSIVVLSVSVSGVAYLWKLKFLSEDKV+PT
Sbjct: 216 MSAGKLSRGPVLSMKHPPFISECRNMNNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVSPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL    
Sbjct: 276 KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL---- 335

Query: 121 PAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLF 180
                 NIALEKEGPHEI+QAVTSPKSKKSKKKRAASDLDSQ AGDVSDVGNED SNVLF
Sbjct: 336 ------NIALEKEGPHEIEQAVTSPKSKKSKKKRAASDLDSQTAGDVSDVGNEDTSNVLF 395

Query: 181 NDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 240
           NDDLNEPTMGDKLA+LNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL
Sbjct: 396 NDDLNEPTMGDKLANLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALL 455

Query: 241 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 300
           LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI
Sbjct: 456 LECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRI 515

Query: 301 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEXXXXXXXXXXXXX 360
           MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD EAE        XXXXX
Sbjct: 516 MSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDGEAEENDAIVPIXXXXX 575

Query: 361 XXXXXXXXXXXXXXXXXXXXVEV-EAFDDLSAGEVDDDMSE 401
           XXXXXXXXXXXXXXXXXXXX EV EAFDDLSAGEVDDDMSE
Sbjct: 576 XXXXXXXXXXXXXXXXXXXXXEVEEAFDDLSAGEVDDDMSE 606

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BLAST of Carg18829 vs. NCBI nr
Match: XP_022150139.1 (WD repeat-containing protein 43 [Momordica charantia])

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 328/408 (80.39%), Postives = 355/408 (87.01%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           MSA KLS+GPVLSMKHPPFVSEC+NI+N EDSIVVLSVSVSGVAY+W+LK LSED+V+P 
Sbjct: 218 MSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPN 277

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KVTVK N+ +SAEENHGSAKKNRISV++S I G GDNEVSVLVTHGSMD PQ ++ NIGY
Sbjct: 278 KVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGY 337

Query: 121 PAKEDANIALEK-----------EGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSD 180
             KED N A EK           +GPHEI+QAVT+PKSKKSKKKRAASD+DS  AGDVS 
Sbjct: 338 SVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSG 397

Query: 181 VGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLK 240
           VGN D S+VLFNDD+NEPTMG+KLASLNL +Q+EDE+HEQ EPSVPAIPPSADSVQVLLK
Sbjct: 398 VGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQXEPSVPAIPPSADSVQVLLK 457

Query: 241 QALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWL 300
           QAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LISIIQSRGAILVCA+PWL
Sbjct: 458 QALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWL 517

Query: 301 RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEA-EX 360
           RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEE  + 
Sbjct: 518 RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDN 577

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVEAFDDLSAGEVDD 397
                    XXXXXXXXXXXXXXXXXXXXXXX    AF DLSAGEVDD
Sbjct: 578 DAIVPIIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGDLSAGEVDD 625

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BLAST of Carg18829 vs. TAIR10
Match: AT1G15420.1 (Small-subunit processome, Utp12 (InterPro:IPR007148))

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-46
Identity = 102/178 (57.30%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 172 NEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPA--IPPSADSVQVLLK 231
           +ED   VL +D LNEPT+GDKL SL+L    +  + E +  S P    PP+A SV VLL+
Sbjct: 51  DEDRDGVLVDDTLNEPTIGDKLESLDLLNGEKVNSEESNRDSAPGDDKPPTAASVNVLLR 110

Query: 232 QALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWL 291
           QAL ADDR+LLL+CLY +D++VI+ S+A+LNS++VLKLL+AL+ I+QSRGAIL C IPW+
Sbjct: 111 QALHADDRSLLLDCLYNRDEQVIANSVAKLNSAEVLKLLNALLPILQSRGAILACTIPWI 170

Query: 292 RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAE 348
           + LLL H+S IMSQESSLLALN++YQLIESR+ST  +A+ +SS LD +   + +EE E
Sbjct: 171 KSLLLTHSSGIMSQESSLLALNTMYQLIESRVSTIHTAVEVSSGLDLIVDDLDEEEDE 228

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BLAST of Carg18829 vs. Swiss-Prot
Match: sp|Q15061|WDR43_HUMAN (WD repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=WDR43 PE=1 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 44/161 (27.33%), Postives = 79/161 (49.07%), Query Frame = 0


Query: 185 NEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECL 244
           NE ++ ++L +++++   + +   Q            +S  VLL Q L ++D  +L + L
Sbjct: 434 NEVSIEERLGAMDIDTHKKGKEDLQ-----------TNSFPVLLTQGLESNDFEMLNKVL 493

Query: 245 YTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRIMSQE 304
            T++  +I K++ ++    ++ LL  L   +Q      V  + WL+ +L  HAS + +  
Sbjct: 494 QTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLP 553

Query: 305 SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE 346
             +  L +LYQL+ESR+ TFQ    L   L  L T V   E
Sbjct: 554 DLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASE 583

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BLAST of Carg18829 vs. Swiss-Prot
Match: sp|Q6ZQL4|WDR43_MOUSE (WD repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Wdr43 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 3.6e-06
Identity = 45/160 (28.12%), Postives = 78/160 (48.75%), Query Frame = 0


Query: 186 EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLY 245
           E T+ ++L +++L+ +   ++ +             +S  VLL Q L ++D  +L + L 
Sbjct: 434 EATIEERLGAMDLDRKGRKDDLQ------------TNSFAVLLTQGLESNDFEILNKVLQ 493

Query: 246 TKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRIMSQES 305
           TK+  +I +++ ++    V+ LL  L   +Q         I WL+ +L  HAS + +   
Sbjct: 494 TKNVNLIKRTVLRIPLRVVIPLLQELTKRLQGHPNSAALMIQWLKCVLTIHASYLSTLPD 553

Query: 306 SLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE 346
            +  L +LYQL+ESR+ TFQ    L   L  L T V   E
Sbjct: 554 LVEQLGTLYQLMESRVKTFQKLSNLHGKLILLVTQVTASE 581

[Close]

BLAST of Carg18829 vs. TrEMBL
Match: tr|A0A1S3CDX9|A0A1S3CDX9_CUCME (WD repeat-containing protein 43 OS=Cucumis melo OX=3656 GN=LOC103499777 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.9e-146
Identity = 285/356 (80.06%), Postives = 316/356 (88.76%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           MSAGK S+GPVLSM HPPFVSECRN++N EDS+VVLSVSVSG AYLWKLK LSED+V PT
Sbjct: 216 MSAGKFSRGPVLSMNHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVIPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KV+VK N+ +SAEENHGSAKKNR+SVL+S I  +GDNEVSVLVTHGS+DLPQH++L+IGY
Sbjct: 276 KVSVKANDNQSAEENHGSAKKNRVSVLASKIHRIGDNEVSVLVTHGSVDLPQHSLLDIGY 335

Query: 121 PAKEDANIALE-----------KEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSD 180
             KEDAN A E           ++GPHEI+Q +T PKSKKSKKKRAASDLDS  AGDVSD
Sbjct: 336 TVKEDANTAHENKTLQQNDGVSEQGPHEIEQVIT-PKSKKSKKKRAASDLDSPTAGDVSD 395

Query: 181 VGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLK 240
           VGN D S+V+FNDDLNEP+MG+KLASLNL +QNED   EQ++PSVP IPPSADSVQVLLK
Sbjct: 396 VGNGDASDVVFNDDLNEPSMGEKLASLNLADQNEDGGREQEDPSVPVIPPSADSVQVLLK 455

Query: 241 QALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWL 300
           QAL ADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLH++IS IQSRGAILVCA+PWL
Sbjct: 456 QALHADDHALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSVISFIQSRGAILVCALPWL 515

Query: 301 RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE 346
           RGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEE
Sbjct: 516 RGLLLQHASKIMSQESSLLALNSLYQLIEARISTFQSALLLSSSLDFLYTGVLDEE 570

[Close]

BLAST of Carg18829 vs. TrEMBL
Match: tr|A0A0A0KBW9|A0A0A0KBW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433260 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.8e-143
Identity = 282/356 (79.21%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPT 60
           +SAGK S+GP+LSMKHPPFVSECRN++N EDS+VVLSVSVSG AYLWKLK LSED+V PT
Sbjct: 216 ISAGKFSRGPILSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVTPT 275

Query: 61  KVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGY 120
           KV+VK N+ +SAEENHGSAKKNR SVL+S I G+GDNEVSVLVTHGS+DLPQHT+L+IGY
Sbjct: 276 KVSVKANDNQSAEENHGSAKKNRASVLASRIHGIGDNEVSVLVTHGSVDLPQHTLLDIGY 335

Query: 121 PAKEDANIALE-----------KEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSD 180
             KEDAN A E           ++GPHEI+Q +T PKSKKSKKKRAAS+LDS  AGDVSD
Sbjct: 336 TVKEDANTAHENKTLQQNDCVSEQGPHEIEQVIT-PKSKKSKKKRAASELDSLTAGDVSD 395

Query: 181 VGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLK 240
           VGN D S+VLFNDDLNEP+MG+KLASLNL +QN+D   EQ++PSVP IPPSADSVQVLLK
Sbjct: 396 VGNGDTSDVLFNDDLNEPSMGEKLASLNLADQNKDGGREQEDPSVPVIPPSADSVQVLLK 455

Query: 241 QALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWL 300
           QAL ADDRALLLECLYTKD KVISKSIAQLNSSDVL LLHALIS IQSRGAILVCA+PWL
Sbjct: 456 QALHADDRALLLECLYTKDVKVISKSIAQLNSSDVLTLLHALISFIQSRGAILVCALPWL 515

Query: 301 RGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE 346
           R L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD+E
Sbjct: 516 RCLILQHASKIMSQESSLLALNSLYQLIESRTSTFQSALLLSSSLDFLYTEVLDKE 570

[Close]

BLAST of Carg18829 vs. TrEMBL
Match: tr|A0A1Q3BDQ7|A0A1Q3BDQ7_CEPFO (Utp12 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09495 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 200/356 (56.18%), Postives = 260/356 (73.03%), Query Frame = 0


Query: 7   SQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKV 66
           S+GPVLSM+ PP   EC+N  +GE  + VL+VS SGVAY+W L  +S+D+VNP K+TVK 
Sbjct: 223 SRGPVLSMRRPPLSFECKNGYDGERGLFVLAVSDSGVAYIWNLNTISQDEVNPKKITVKA 282

Query: 67  NNVESAEENHGSAKKNRISVLSSTIQGL-GDNEVSVLVTHGSMDLPQHTVLNIGYP---- 126
              E   +N  +AKKNRI+++++ +  +  D  VSVL+++GS+D PQ   +N+  P    
Sbjct: 283 KPSE-VYQNTANAKKNRINIIAARLCAIQPDKAVSVLISYGSIDSPQFDHVNVSDPGEDI 342

Query: 127 ---AKEDANIA----LEKEG-PHEIKQAVTSP-KSKKSKKKRAASDLDSQKAGDVSDVGN 186
              AK +  I     L + G P+   +A  +P K++K+ KKRAASD D   + D++D+GN
Sbjct: 343 VITAKYETEIVPDGFLARTGLPNSDLEATVNPDKNRKTNKKRAASDPDLATSIDMTDLGN 402

Query: 187 ED-MSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQA 246
           E+ M  VL +DDLNEPTMG+KLASLNL E  +  + E+ E S  A PPSADSV VLLKQA
Sbjct: 403 EEAMDGVLADDDLNEPTMGEKLASLNLLENGKTNSPEKQESSPSAKPPSADSVNVLLKQA 462

Query: 247 LRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRG 306
           L ADDR+LLL+CLYT++DKVI+ SI+ LN SDVLKL H+L+SIIQSRGA+L CA+PWLR 
Sbjct: 463 LHADDRSLLLDCLYTQEDKVIANSISLLNLSDVLKLYHSLVSIIQSRGAVLACALPWLRS 522

Query: 307 LLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAE 348
           LLLQHAS IMSQESSLLALNSLYQLIESR+STFQSA  +SS LD LY G++++E E
Sbjct: 523 LLLQHASGIMSQESSLLALNSLYQLIESRVSTFQSARQVSSCLDVLYAGIINDEVE 577

[Close]

BLAST of Carg18829 vs. TrEMBL
Match: tr|A0A067KLK5|A0A067KLK5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06182 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.0e-87
Identity = 192/365 (52.60%), Postives = 262/365 (71.78%), Query Frame = 0


Query: 1   MSAGKLSQGPVLSMKHPPFVSECRNI-NNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNP 60
           +S+  ++ GPVLSM+H P   EC +I    ED  V+L+VS SGVAY+W LK +S D+++P
Sbjct: 213 LSSKSVTSGPVLSMRHYPLSLECEDIGEKAEDGTVILAVSESGVAYVWNLKSISPDEISP 272

Query: 61  TKVTVKVNN--VESAEENHGSAKKNRISVLSSTIQGL-GDNEVSVLVTHGSMDLPQHTVL 120
           TK+TVK +    E  ++   ++KK+R S+L++ +  L  D ++ V++ +G +D PQ +++
Sbjct: 273 TKITVKGSEQLTEKDQQEGENSKKSRSSILAARLHDLKDDKQLKVIIAYGLLDSPQFSIV 332

Query: 121 NIGYPAKE------------DANIALEKEGPHEI--KQAVTSPKSKKSKKKRAASDLDSQ 180
           NI    +               N  L ++G H++  + A+TS ++KK+KKKR+ASD+DS 
Sbjct: 333 NISNSGENIVVKAVDETEIFRENGILPRKGHHDLEPEAALTSTQNKKTKKKRSASDMDSL 392

Query: 181 KAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSAD 240
            AG++     E M  VL  DD+NEPTMG+KLASLNL + +E++ HE+ E  + A PPSAD
Sbjct: 393 AAGELDTDNGEAMDGVLVEDDMNEPTMGEKLASLNLHDNDENKTHEKQELPL-AKPPSAD 452

Query: 241 SVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAIL 300
           SV VLLKQALRA+DRALLL+CLYT+D+KVI+ SI+QLN SDVLKLLH+L++I+ SRGAIL
Sbjct: 453 SVNVLLKQALRAEDRALLLDCLYTQDEKVIANSISQLNPSDVLKLLHSLLTILDSRGAIL 512

Query: 301 VCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVL 348
            CA+PWL+ LLLQHAS IMSQ+SSLLALNSLYQ+IESRISTF SAL LSS LD +Y  V 
Sbjct: 513 ACALPWLKSLLLQHASGIMSQDSSLLALNSLYQIIESRISTFHSALQLSSRLDSIYAMVD 572

[Close]

BLAST of Carg18829 vs. TrEMBL
Match: tr|W9QKF8|W9QKF8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001038 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.0e-85
Identity = 192/363 (52.89%), Postives = 259/363 (71.35%), Query Frame = 0


Query: 2   SAGKLSQGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKF--LSEDKVNP 61
           +AG +S GP+LSMKH P   +C++  NGE   VVL+VS SG+ Y+W LK   L E++ NP
Sbjct: 163 NAGTVSCGPILSMKHAPLSFQCKDGCNGEPGAVVLAVSKSGITYVWHLKSTQLEEEEANP 222

Query: 62  TKVTVKVNNVESAEENHGSAKKNRISVLSSTIQGL-GDNEVSVLVTHGSMDLPQHTVLNI 121
           T++T KVN  E+A +N GS KK+R S++++ +Q       +  LV++GS+D P+ ++ ++
Sbjct: 223 TEITCKVNEDETALQNSGSVKKHRASIIAARLQDFDASKHMRALVSYGSIDHPRFSLFDV 282

Query: 122 GYPAKEDANIALE-----------KEGPHEIK-QAVTSPKSKKSKKKRAASDLDSQKAGD 181
             P ++    ALE           +E  H++  +A   PK  + +KK   S+L+    GD
Sbjct: 283 IKPGEDAIIDALEETKSISENGVAREDLHDMDLEATVLPKKSEKRKKHTVSELEHSTLGD 342

Query: 182 VSDVGNED--MSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSV 241
           + D+GN +  +  +L +DDLNEPTMG+KLA+LNL+    +EN   DE S+ A PPSADSV
Sbjct: 343 MIDIGNGEAAVGVLLDDDDLNEPTMGEKLATLNLDIAKRNEN---DESSLAAKPPSADSV 402

Query: 242 QVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRGAILVC 301
            VLLKQA+ ADDRALLL+CLYT+D+KVI+KSI+ LN SDVLKLL +LISIIQSRGAIL C
Sbjct: 403 HVLLKQAMHADDRALLLDCLYTQDEKVIAKSISLLNPSDVLKLLQSLISIIQSRGAILAC 462

Query: 302 AIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDE 348
           A+PWLR LLLQH+S IMSQESSL+ALNSLYQLIESR+STF+SAL LSS LD LY G++D+
Sbjct: 463 ALPWLRCLLLQHSSGIMSQESSLVALNSLYQLIESRVSTFRSALQLSSVLDVLYAGIVDD 522

The following BLAST results are available for this feature:

BLAST of Carg18829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964606.1	7.3e-189	99.75	WD repeat-containing protein 43 isoform X1 [Cucurbita moschata]	[more]
XP_023513462.1	1.3e-182	94.75	WD repeat-containing protein 43 [Cucurbita pepo subsp. pepo]	[more]
XP_022964607.1	3.6e-180	97.25	WD repeat-containing protein 43 isoform X2 [Cucurbita moschata]	[more]
XP_023000348.1	3.9e-174	92.77	WD repeat-containing protein 43 [Cucurbita maxima]	[more]
XP_022150139.1	1.3e-150	80.39	WD repeat-containing protein 43 [Momordica charantia]	[more]

BLAST of Carg18829 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15420.1	3.7e-46	57.30	Small-subunit processome, Utp12 (InterPro:IPR007148)	[more]

BLAST of Carg18829 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q15061\|WDR43_HUMAN	1.6e-06	27.33	WD repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=WDR43 PE=1 SV=3	[more]
sp\|Q6ZQL4\|WDR43_MOUSE	3.6e-06	28.13	WD repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Wdr43 PE=2 SV=2	[more]

BLAST of Carg18829 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDX9\|A0A1S3CDX9_CUCME	2.9e-146	80.06	WD repeat-containing protein 43 OS=Cucumis melo OX=3656 GN=LOC103499777 PE=4 SV=...	[more]
tr\|A0A0A0KBW9\|A0A0A0KBW9_CUCSA	1.8e-143	79.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433260 PE=4 SV=1	[more]
tr\|A0A1Q3BDQ7\|A0A1Q3BDQ7_CEPFO	1.3e-88	56.18	Utp12 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09...	[more]
tr\|A0A067KLK5\|A0A067KLK5_JATCU	9.0e-87	52.60	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06182 PE=4 SV=1	[more]
tr\|W9QKF8\|W9QKF8_9ROSA	1.0e-85	52.89	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001038 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007148	SSU_processome_Utp12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18829-RA	Carg18829-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007148	Small-subunit processome, Utp12	PFAM	PF04003	Utp12	coord: 236..337 e-value: 9.1E-14 score: 51.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..400
None	No IPR available	PANTHER	PTHR42968	FAMILY NOT NAMED	coord: 4..396
None	No IPR available	PANTHER	PTHR42968:SF14	SUBFAMILY NOT NAMED	coord: 4..396

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18829	Cla015387	Watermelon (97103) v1	carwmB0744
Carg18829	Csa7G433260	Cucumber (Chinese Long) v2	carcuB0762
Carg18829	MELO3C023398	Melon (DHL92) v3.5.1	carmeB0740
Carg18829	ClCG09G002680	Watermelon (Charleston Gray)	carwcgB0724
Carg18829	CSPI07G20840	Wild cucumber (PI 183967)	carcpiB0779
Carg18829	Cucsa.105220	Cucumber (Gy14) v1	carcgyB0837
Carg18829	CmaCh08G006680	Cucurbita maxima (Rimu)	carcmaB1046
Carg18829	CmoCh08G006340	Cucurbita moschata (Rifu)	carcmoB1018
Carg18829	Lsi02G027320	Bottle gourd (USVL1VR-Ls)	carlsiB683
Carg18829	Cp4.1LG17g05770	Cucurbita pepo (Zucchini)	carcpeB1051
Carg18829	CsGy7G019080	Cucumber (Gy14) v2	carcgybB0741
Carg18829	MELO3C023398.2	Melon (DHL92) v3.6.1	carmedB0753
Carg18829	CsaV3_7G032650	Cucumber (Chinese Long) v3	carcucB0782
Carg18829	Cla97C09G164820	Watermelon (97103) v2	carwmbB0784
Carg18829	Bhi09G000044	Wax gourd	carwgoB0880

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None