Carg18819 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18819
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rhomboid-like protein
Location	Cucurbita_argyrosperma_scaffold_123 : 402035 .. 404640 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAGGTCGCCGCCGGGCGACATCGAGTCCATGTCCTATGAGGTCCGAAAGCCCCTCTCAATGCCGCCACCGCCAAGCTATTACCCTCCGCCTCCCAAACCCTGGTTCCCATGGCTTGTGCCTCTCACTTTCCTGGCCAATATCGCCATGTTTTCTTTCACATTATATGAAAATAATTGCCCCGCGGCCATCGGCGGCAACCGCTGCCTCTTTTACCCTGAGCTCGGCCGGTTCTCCTTTCAGCCATTTCAGGAGAACCCCCTCCTCGGTCCTTCCATCAGCACGTAAGAATCCATTGATTTGGGTGTTCGTTTAATCGAAAAATTAGCATATGGGTTTTGTAAATCTCGAGGAAATTGGACGACCCATCAAGAGAAAACATGATTTTTGGGGGAAACTTCTGGGTTTAGCAGAAGGGGAAGAACAGAGGAACAGAAGAACAGGGGAGTTTTGTTTGATTTTTTTTTTTTTTTTTTTGTTCTTTGTTCTTTGTATTTTGCAGTTTGAAACGATATGGAGCATTGGATAAAGAAGCAGTAGTGGAACATGGGGAAGGGTGGCGCTTGGTTTCGTGTATGTGGCTTCATGCTGGTGTTATTCATTTACTTGCAAATATGCTCAGTCTTCTCTTCATTGGAATTCGGCTCGAACAAGAATTTGGATTTTGTAAGCCTTTTGAACACTGTAAACTGCTTTGTTTTTTTTTTTTTTTTTTAAGTGTTGATTCATAGTTTCACTTTGAACACTCTACAAACATATGTAGTTCAAACACTAAGAACAAGAGGGAGGGAGAGATTTTGTTTAGCAAGAGTTTGGGATGATTTCGTATCAGAAAGTGCTTTTAAGGGGGGAAAACTCTGTTTATGTGCTTCGCCTAGAAATATTTAAGGGTTTTTTTGTAGTGTTTTTAGAATTTGTTAAGTTACTTTGATTGTTTAGTACAAGAATTTAGACAAGTGGTTTTATATAAGTATGAACACTTTAGTTTGGGCTGTATATCTGTATCTGAAGTTTGATGGACAAGTATAATATAACATACCAAGTCCACTCTTGTAGATATTGTCCGTTTTGATCCGTTACGTATCGCTATTAGCCTCACGATTTTAAAACGTGTCTGTTCGGAAGAGGTTTCCAATGGGGGTGGATTGTGAAATCGCACATCAGTTGGAGAGGCAGACGAAGTATTCTTTATAAGGGTGTGCAAACCTTTCCCTAACAGACGTGTTTTAAAACCGTGAGGTTGACGGTGATACGTAACGGACTAAAGTAGACATTATCTATTAGCGGTGGACTTGGACCGTTACAAATAGTATCAGGGTCAGACACCGAGTGGTGTGCCAGTGAGGACGTTGGGTCTCCAAGAGAGGTAGGTAGATATGAAATTGGTTGTGGAAACCGCTCCCTAATAGACGTGTTCTGAAACTATGAAGACAGCTATACGTAACAGGCTAAAGCGGATCCTAAGGGAGTAGGCTTAGGTTGTTACAATCAAACAATCAAACGTTTATTAAGCCGATAAATAGAGACAAGTATCATATTAAATTTCTTAAAAACTAATGGGTTGTCAATTATGGTCGTGTACATGTCATAGTCATATTCAGTAGAAAATCATGTTTGGTTCTTGTTTTTGGTTTTGGCAGTGAAAATAGGATGTTTGTATGTGCTTTCTGGATTTGGTGGGAGCTTACTGTCATCTCTGAGTATCAATCCATCTGAAAATCCAACCATATCAGTCGGTGCTTCTGGTGCACTTTTTGGGCTTTTGGGCGCTATGCTTTCTGAGCTCATCACAAATTGGACAATATATTCAAATAAGGTAACCAAAAAGAAACAAATAATACTTTTTCCATTCCATCTTTCCATATTATACATTGGGACCTTATGGCTTGTTTCTCATTGATACTCAGTGTGCAGCCTTCATATCTTTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGATTCATACCTCACATCGACAATTCAGCACACATCGGAGGCTTCGTTTCGGGCTTTCTCCTCGGCTTCATCCTCCTTATCCAACCGCAGTTCGGATACGTTAACCATAAGTACATCCCTGCAGGAGCTGATGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACTTTTTGTTGATCGTAGCTCTAATCCTCTTGATTTTCGGGTAAGCGAAACCGAAGCGACGGTATACTTTCCTTCTAGCTCGAGTTTTTTCTCGTAACTCATGTAATTTTTTCAGATATGCTTCTGGGTTAACAAGGCTTTACAAAACTGGTCCACAAGTATTGGAAAGCAACACTTTCTGAAGAGGCTGATGGGAAGCATAAGTACTTTGATTTGGTGATCGTTTGGCCGAGGAAAGTTTATAAGATTTTCCTTTGAAAGTGTAATTTAAACGATAAAATCATAATGTGAAGTTAAACTTCTACTCACTCGCAGTAGTAGAAGAATTGTATGTAGAAAATACCCACTTCTCCTTTTGTTTTATAGATCTCTGTTCCTTAATCTCCAAAGATCCACACTTTTCAAGCAATGCAATGGAGATTGTTAGAGATTATAGAGGACAAATTTTTGCTCGATGTTTCGTGTTTCCTTAGATG

mRNA sequence

ATGGGGAAGAGGTCGCCGCCGGGCGACATCGAGTCCATGTCCTATGAGGTCCGAAAGCCCCTCTCAATGCCGCCACCGCCAAGCTATTACCCTCCGCCTCCCAAACCCTGGTTCCCATGGCTTGTGCCTCTCACTTTCCTGGCCAATATCGCCATGTTTTCTTTCACATTATATGAAAATAATTGCCCCGCGGCCATCGGCGGCAACCGCTGCCTCTTTTACCCTGAGCTCGGCCGGTTCTCCTTTCAGCCATTTCAGGAGAACCCCCTCCTCGGTCCTTCCATCAGCACTTTGAAACGATATGGAGCATTGGATAAAGAAGCAGTAGTGGAACATGGGGAAGGGTGGCGCTTGGTTTCGTGTATGTGGCTTCATGCTGGTGTTATTCATTTACTTGCAAATATGCTCAGTCTTCTCTTCATTGGAATTCGGCTCGAACAAGAATTTGGATTTTTGAAAATAGGATGTTTGTATGTGCTTTCTGGATTTGGTGGGAGCTTACTGTCATCTCTGAGTATCAATCCATCTGAAAATCCAACCATATCAGTCGGTGCTTCTGGTGCACTTTTTGGGCTTTTGGGCGCTATGCTTTCTGAGCTCATCACAAATTGGACAATATATTCAAATAAGTGTGCAGCCTTCATATCTTTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGATTCATACCTCACATCGACAATTCAGCACACATCGGAGGCTTCGTTTCGGGCTTTCTCCTCGGCTTCATCCTCCTTATCCAACCGCAGTTCGGATACGTTAACCATAAGTACATCCCTGCAGGAGCTGATGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACTTTTTGTTGATCGTAGCTCTAATCCTCTTGATTTTCGGATATGCTTCTGGGTTAACAAGGCTTTACAAAACTGGTCCACAAGTATTGGAAAGCAACACTTTCTGAAGAGGCTGATGGGAAGCATAAGTACTTTGATTTGGTGATCGTTTGGCCGAGGAAAGTTTATAAGATTTTCCTTTGAAAGTGTAATTTAAACGATAAAATCATAATGTGAAGTTAAACTTCTACTCACTCGCAGTAGTAGAAGAATTGTATGTAGAAAATACCCACTTCTCCTTTTGTTTTATAGATCTCTGTTCCTTAATCTCCAAAGATCCACACTTTTCAAGCAATGCAATGGAGATTGTTAGAGATTATAGAGGACAAATTTTTGCTCGATGTTTCGTGTTTCCTTAGATG

Coding sequence (CDS)

ATGGGGAAGAGGTCGCCGCCGGGCGACATCGAGTCCATGTCCTATGAGGTCCGAAAGCCCCTCTCAATGCCGCCACCGCCAAGCTATTACCCTCCGCCTCCCAAACCCTGGTTCCCATGGCTTGTGCCTCTCACTTTCCTGGCCAATATCGCCATGTTTTCTTTCACATTATATGAAAATAATTGCCCCGCGGCCATCGGCGGCAACCGCTGCCTCTTTTACCCTGAGCTCGGCCGGTTCTCCTTTCAGCCATTTCAGGAGAACCCCCTCCTCGGTCCTTCCATCAGCACTTTGAAACGATATGGAGCATTGGATAAAGAAGCAGTAGTGGAACATGGGGAAGGGTGGCGCTTGGTTTCGTGTATGTGGCTTCATGCTGGTGTTATTCATTTACTTGCAAATATGCTCAGTCTTCTCTTCATTGGAATTCGGCTCGAACAAGAATTTGGATTTTTGAAAATAGGATGTTTGTATGTGCTTTCTGGATTTGGTGGGAGCTTACTGTCATCTCTGAGTATCAATCCATCTGAAAATCCAACCATATCAGTCGGTGCTTCTGGTGCACTTTTTGGGCTTTTGGGCGCTATGCTTTCTGAGCTCATCACAAATTGGACAATATATTCAAATAAGTGTGCAGCCTTCATATCTTTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGATTCATACCTCACATCGACAATTCAGCACACATCGGAGGCTTCGTTTCGGGCTTTCTCCTCGGCTTCATCCTCCTTATCCAACCGCAGTTCGGATACGTTAACCATAAGTACATCCCTGCAGGAGCTGATGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACTTTTTGTTGATCGTAGCTCTAATCCTCTTGATTTTCGGATATGCTTCTGGGTTAACAAGGCTTTACAAAACTGGTCCACAAGTATTGGAAAGCAACACTTTCTGA

Protein sequence

MGKRSPPGDIESMSYEVRKPLSMPPPPSYYPPPPKPWFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASGLTRLYKTGPQVLESNTF

Homology

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BLAST of Carg18819 vs. NCBI nr
Match: XP_022964405.1 (RHOMBOID-like protein 5 [Cucurbita moschata])

HSP 1 Score: 615.5 bits (1586), Expect = 9.9e-173
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60
           MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN
Sbjct: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60

Query: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120
           NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS
Sbjct: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240

Query: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300
           GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG
Sbjct: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300

Query: 301 LTRLYKTGPQVLESNTF 318
           LTRLYKTGPQVLESNTF
Sbjct: 301 LTRLYKTGPQVLESNTF 317

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BLAST of Carg18819 vs. NCBI nr
Match: XP_023514894.1 (RHOMBOID-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613.2 bits (1580), Expect = 4.9e-172
Identity = 315/317 (99.37%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60
           MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMF+FTLYEN
Sbjct: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFAFTLYEN 60

Query: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120
           NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSI+TLKRYGALDKEAVVEHGEGWRLVS
Sbjct: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSITTLKRYGALDKEAVVEHGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240

Query: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300
           GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG
Sbjct: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300

Query: 301 LTRLYKTGPQVLESNTF 318
           LTRLYKTGPQVLESNTF
Sbjct: 301 LTRLYKTGPQVLESNTF 317

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BLAST of Carg18819 vs. NCBI nr
Match: XP_023000373.1 (RHOMBOID-like protein 5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 608.2 bits (1567), Expect = 1.6e-170
Identity = 313/317 (98.74%), Postives = 314/317 (99.05%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60
           MGKRSPPGDIESMSY+VRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMF FTLYEN
Sbjct: 1   MGKRSPPGDIESMSYDVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFVFTLYEN 60

Query: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120
           NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS
Sbjct: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENP 
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPI 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240

Query: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300
           GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGY SG
Sbjct: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYVSG 300

Query: 301 LTRLYKTGPQVLESNTF 318
           LTRLYKTGPQVLESNTF
Sbjct: 301 LTRLYKTGPQVLESNTF 317

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BLAST of Carg18819 vs. NCBI nr
Match: XP_022147001.1 (RHOMBOID-like protein 5 [Momordica charantia])

HSP 1 Score: 530.0 bits (1364), Expect = 5.4e-147
Identity = 269/323 (83.28%), Postives = 299/323 (92.57%), Query Frame = 0


Query: 1   MGKRSPP----GDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFT 60
           MGK+  P     DIESMS+EVRKPLSMPXXXXXXXXXXXPWFPWL+PLTF+ANIAMF+FT
Sbjct: 1   MGKKVSPQPPYDDIESMSFEVRKPLSMPXXXXXXXXXXXPWFPWLMPLTFIANIAMFAFT 60

Query: 61  LYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGW 120
           +Y+NNCPA  G  RCLFYPELGRFSFQPFQENPLLGPSI+ LKRYGALD+E+VVEHGEGW
Sbjct: 61  MYQNNCPAVTGPRRCLFYPELGRFSFQPFQENPLLGPSINILKRYGALDRESVVEHGEGW 120

Query: 121 RLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPS 180
           RL+SC+WLHAGV+HLLANMLSLLF+GIRLEQEFGFL+IG LY+LSGFGGSLLSSL+INP 
Sbjct: 121 RLISCIWLHAGVVHLLANMLSLLFVGIRLEQEFGFLRIGFLYLLSGFGGSLLSSLNINPV 180

Query: 181 ENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNS 240
           ENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAA +SLIL+IALNLAVGF+PH+DNS
Sbjct: 181 ENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAMMSLILVIALNLAVGFVPHVDNS 240

Query: 241 AHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFG 300
           AHIGGFVSGFLLGF+LL++PQFGYVN KYIPAG+DVKR +KH+CYQYFLL++AL LLIFG
Sbjct: 241 AHIGGFVSGFLLGFVLLMRPQFGYVNRKYIPAGSDVKRTAKHQCYQYFLLVLALGLLIFG 300

Query: 301 YASGLTRLY--KTGPQVLESNTF 318
           YASGL RLY  KT P+V ESN F
Sbjct: 301 YASGLRRLYSNKTAPRVFESNIF 323

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BLAST of Carg18819 vs. NCBI nr
Match: XP_022991576.1 (RHOMBOID-like protein 5 [Cucurbita maxima])

HSP 1 Score: 517.3 bits (1331), Expect = 3.7e-143
Identity = 266/317 (83.91%), Postives = 290/317 (91.48%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60
           MGK+ P  DIESMSY VRKPLSMPXXXXXXXXXXXPWFP+LVPL F+A+IA+F FTLYEN
Sbjct: 1   MGKKLPRDDIESMSYGVRKPLSMPXXXXXXXXXXXPWFPFLVPLIFVADIALFVFTLYEN 60

Query: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120
           NCPA  GGNRCLFYPEL R+SFQPF ENPLLGPSI TLKRYGALD+EAVVE GEGWRL++
Sbjct: 61  NCPATTGGNRCLFYPELDRYSFQPFSENPLLGPSIMTLKRYGALDREAVVERGEGWRLLT 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180
           CMWLHAGVIHLLANM+SLLFIG+RLEQEFG+L+IGCLYVLSGFGGSLLS LSINP+E  T
Sbjct: 121 CMWLHAGVIHLLANMISLLFIGVRLEQEFGYLRIGCLYVLSGFGGSLLSCLSINPAET-T 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240
           ISVGASGALFGLLGA+LSELITNWTIYSNKCAA +SLILIIALNLAVGFIPH+DNSAHIG
Sbjct: 181 ISVGASGALFGLLGALLSELITNWTIYSNKCAAMMSLILIIALNLAVGFIPHVDNSAHIG 240

Query: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGYASG 300
           GF+        LLI+PQFGYVN KYIPAG DVKRKSKH+CYQYFLL+VALILLIFGYASG
Sbjct: 241 GFLXXXXXXXXLLIRPQFGYVNPKYIPAGCDVKRKSKHQCYQYFLLLVALILLIFGYASG 300

Query: 301 LTRLYKTGPQVLESNTF 318
           L+RLYKTGPQ+LE+N F
Sbjct: 301 LSRLYKTGPQILEANIF 316

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BLAST of Carg18819 vs. TAIR10
Match: AT1G52580.1 (RHOMBOID-like protein 5)

HSP 1 Score: 347.8 bits (891), Expect = 7.0e-96
Identity = 177/308 (57.47%), Postives = 225/308 (73.05%), Query Frame = 0


Query: 1   MGKRSP-PGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYE 60
           MGKR P P DIE+      +P   P           PW  WLVPL   AN   F+ T+Y 
Sbjct: 1   MGKRPPIPPDIENGPPPPARPHFRP-------PIPVPWVAWLVPLILAANFVTFATTMYV 60

Query: 61  NNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLV 120
           N+CPA    + CL +  LGR SFQP +EN LLGPSI TL++ GAL++  +VE GE WRL+
Sbjct: 61  NDCPAR--SDECLLFDVLGRLSFQPIKENMLLGPSIPTLRKLGALERR-LVEEGERWRLI 120

Query: 121 SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENP 180
           SC+WLH G +HL+ANM+SL+ IG+RLEQEFGF++IG LYV+SG GGSL+S L+   S+  
Sbjct: 121 SCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLT--DSQGE 180

Query: 181 TISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHI 240
            +SVGASGALFGLLGAMLSELITNWTIY NKC A ++LILII LNL+VGF+P +DNSAH 
Sbjct: 181 RVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDNSAHF 240

Query: 241 GGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVK-RKSKHKCYQYFLLIVALILLIFGYA 300
           GGF++GF LGF+LL++PQ+GYVN KYIP G D+K +KSKHKCYQ+     +L +L+ G+ 
Sbjct: 241 GGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFI 296

Query: 301 SGLTRLYK 307
           +G T+L +
Sbjct: 301 AGYTKLLR 296

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BLAST of Carg18819 vs. TAIR10
Match: AT2G29050.1 (RHOMBOID-like 1)

HSP 1 Score: 331.3 bits (848), Expect = 6.7e-91
Identity = 171/271 (63.10%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           WFPWLVP   +ANIA+F+ +++ NNCP         F   LGRF+FQP +ENPLLGPS  
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNSAYCLARF---LGRFAFQPMKENPLLGPSSL 113

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL++ GALD   VV   E WRL +C+WLHAGV H+LANMLSL+FIGIRLEQEFGF++IG 
Sbjct: 114 TLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 173

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           LY++SGFGGSLLSSL         ISVGASGALFGLLGAMLSEL+TNWTIY+NK AA ++
Sbjct: 174 LYMISGFGGSLLSSL----FNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLT 233

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAG-ADVKRK 276
           LI IIA+NLAVG +PH+DN AH+GGF SGFLLGF+ LI+PQ+GY N +  P G A    K
Sbjct: 234 LIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAK 293

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLYK 307
           SKHK YQY L I +L+LLI GY +GL  L +
Sbjct: 294 SKHKPYQYVLWITSLVLLIAGYTAGLVVLLR 317

[Close]

BLAST of Carg18819 vs. TAIR10
Match: AT3G53780.2 (RHOMBOID-like protein 4)

HSP 1 Score: 296.2 bits (757), Expect = 2.4e-80
Identity = 147/269 (54.65%), Postives = 195/269 (72.49%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           WFPWL+P   +AN+A+F  T+Y NNCP   G     F   LGRFSFQ  +ENPLLGPS  
Sbjct: 64  WFPWLIPCFVVANVAVFVITMYVNNCPKKSGD---CFADFLGRFSFQNTRENPLLGPSSL 123

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL+  G LD + VV+  EGWRL+SC WLH GV+HLL NML+LLFIGIR+E+EFGF++IG 
Sbjct: 124 TLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGL 183

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           LY++SGFGGS+LS+L +  +    ISVGASGA+FGLLG MLSE+  NWTIYSNK    ++
Sbjct: 184 LYLISGFGGSILSALFLRSN----ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVT 243

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKS 276
           L+LI+A+NL +G +P +DN AHIGGF +GFLLGF+LLI+P +G++N +  P      +  
Sbjct: 244 LVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGA----KPH 303

Query: 277 KHKCYQYFLLIVALILLIFGYASGLTRLY 306
           + K YQ  L  ++L++L+ G+  GL  L+
Sbjct: 304 RFKIYQGILWTISLLILVAGFIVGLISLF 321

[Close]

BLAST of Carg18819 vs. TAIR10
Match: AT1G12750.1 (RHOMBOID-like protein 6)

HSP 1 Score: 275.0 bits (702), Expect = 5.7e-74
Identity = 139/270 (51.48%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCP-AAIGGNRCLFYPELGRFSFQPFQENPLLGPSI 96
           W  WL P   +AN+++F   +Y N+CP    G N       L RFSFQP +ENP LGPS 
Sbjct: 18  WTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPSS 77

Query: 97  STLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIG 156
           STL++ GALD + VV+  E WRL++ MWLHAG+IHL+ NM  ++  GIRLEQ+FGF++IG
Sbjct: 78  STLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIG 137

Query: 157 CLYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFI 216
            +Y++SGFGGS+LS+L +  S    ISVGASGAL GL+GAMLSEL+TNWTIY +K  A +
Sbjct: 138 LIYLISGFGGSILSALFLQKS----ISVGASGALLGLMGAMLSELLTNWTIYKSKLCALL 197

Query: 217 SLILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRK 276
           S + IIA+NLA+G +P +DN AHIGG ++GF LGFILL+QPQ G+   +   +    + +
Sbjct: 198 SFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRN-SSQYGARAR 257

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLY 306
           SK+   QY L  VA +L++ G   GL  L+
Sbjct: 258 SKYNPCQYVLFFVAAVLVVAGLTVGLVMLF 282

[Close]

BLAST of Carg18819 vs. TAIR10
Match: AT4G23070.1 (RHOMBOID-like protein 7)

HSP 1 Score: 247.7 bits (631), Expect = 9.8e-66
Identity = 133/271 (49.08%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           W  W++P+  +AN+ +F   +Y N+CP     +RCL    LGRFSF+ F+ NPLLGPS S
Sbjct: 29  WRSWIIPIVVIANVVVFVVVMYYNDCPHK--SHRCL-AKFLGRFSFESFKSNPLLGPSSS 88

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL++ GAL    +V   + WRL++CMWLHAGVIHLLANM  + +IG+RLEQ+FGF+++G 
Sbjct: 89  TLEKMGALAWGKIVHKRQVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGT 148

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           +Y++SGF GS+LS L +  +    ISVGAS ALFGLLGAMLSEL+ NWT Y NK  A + 
Sbjct: 149 IYLVSGFCGSILSCLFLEDA----ISVGASSALFGLLGAMLSELLINWTTYDNKGVAIVM 208

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGY-VNHKYIPAGADVKRK 276
           L++I+ +NL +G +P +DN AHIGGF         LLI PQF +  N   +  G  V  K
Sbjct: 209 LLVIVGVNLGLGTLPPVDNFAHIGGFFXXXXXXXXLLIHPQFEWEENQVSLMPGTIV--K 268

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLYK 307
            K+   Q  L IVA I+ + G+ SGL  L++
Sbjct: 269 PKYNTCQLVLCIVASIVFVAGFTSGLVILFR 290

[Close]

BLAST of Carg18819 vs. Swiss-Prot
Match: sp|Q9SSR0|RBL5_ARATH (RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-94
Identity = 177/308 (57.47%), Postives = 225/308 (73.05%), Query Frame = 0


Query: 1   MGKRSP-PGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYE 60
           MGKR P P DIE+      +P   P           PW  WLVPL   AN   F+ T+Y 
Sbjct: 1   MGKRPPIPPDIENGPPPPARPHFRP-------PIPVPWVAWLVPLILAANFVTFATTMYV 60

Query: 61  NNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLV 120
           N+CPA    + CL +  LGR SFQP +EN LLGPSI TL++ GAL++  +VE GE WRL+
Sbjct: 61  NDCPAR--SDECLLFDVLGRLSFQPIKENMLLGPSIPTLRKLGALERR-LVEEGERWRLI 120

Query: 121 SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENP 180
           SC+WLH G +HL+ANM+SL+ IG+RLEQEFGF++IG LYV+SG GGSL+S L+   S+  
Sbjct: 121 SCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLT--DSQGE 180

Query: 181 TISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHI 240
            +SVGASGALFGLLGAMLSELITNWTIY NKC A ++LILII LNL+VGF+P +DNSAH 
Sbjct: 181 RVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDNSAHF 240

Query: 241 GGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVK-RKSKHKCYQYFLLIVALILLIFGYA 300
           GGF++GF LGF+LL++PQ+GYVN KYIP G D+K +KSKHKCYQ+     +L +L+ G+ 
Sbjct: 241 GGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFI 296

Query: 301 SGLTRLYK 307
           +G T+L +
Sbjct: 301 AGYTKLLR 296

[Close]

BLAST of Carg18819 vs. Swiss-Prot
Match: sp|Q0WQX7|RBL1_ARATH (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-89
Identity = 171/271 (63.10%), Postives = 205/271 (75.65%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           WFPWLVP   +ANIA+F+ +++ NNCP         F   LGRF+FQP +ENPLLGPS  
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNSAYCLARF---LGRFAFQPMKENPLLGPSSL 113

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL++ GALD   VV   E WRL +C+WLHAGV H+LANMLSL+FIGIRLEQEFGF++IG 
Sbjct: 114 TLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 173

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           LY++SGFGGSLLSSL         ISVGASGALFGLLGAMLSEL+TNWTIY+NK AA ++
Sbjct: 174 LYMISGFGGSLLSSL----FNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLT 233

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAG-ADVKRK 276
           LI IIA+NLAVG +PH+DN AH+GGF SGFLLGF+ LI+PQ+GY N +  P G A    K
Sbjct: 234 LIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAK 293

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLYK 307
           SKHK YQY L I +L+LLI GY +GL  L +
Sbjct: 294 SKHKPYQYVLWITSLVLLIAGYTAGLVVLLR 317

[Close]

BLAST of Carg18819 vs. Swiss-Prot
Match: sp|F4JBM4|RBL4_ARATH (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.3e-79
Identity = 147/269 (54.65%), Postives = 195/269 (72.49%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           WFPWL+P   +AN+A+F  T+Y NNCP   G     F   LGRFSFQ  +ENPLLGPS  
Sbjct: 64  WFPWLIPCFVVANVAVFVITMYVNNCPKKSGD---CFADFLGRFSFQNTRENPLLGPSSL 123

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL+  G LD + VV+  EGWRL+SC WLH GV+HLL NML+LLFIGIR+E+EFGF++IG 
Sbjct: 124 TLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGL 183

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           LY++SGFGGS+LS+L +  +    ISVGASGA+FGLLG MLSE+  NWTIYSNK    ++
Sbjct: 184 LYLISGFGGSILSALFLRSN----ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVT 243

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKS 276
           L+LI+A+NL +G +P +DN AHIGGF +GFLLGF+LLI+P +G++N +  P      +  
Sbjct: 244 LVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGA----KPH 303

Query: 277 KHKCYQYFLLIVALILLIFGYASGLTRLY 306
           + K YQ  L  ++L++L+ G+  GL  L+
Sbjct: 304 RFKIYQGILWTISLLILVAGFIVGLISLF 321

[Close]

BLAST of Carg18819 vs. Swiss-Prot
Match: sp|Q8VZ48|RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.0e-72
Identity = 139/270 (51.48%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCP-AAIGGNRCLFYPELGRFSFQPFQENPLLGPSI 96
           W  WL P   +AN+++F   +Y N+CP    G N       L RFSFQP +ENP LGPS 
Sbjct: 18  WTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPSS 77

Query: 97  STLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIG 156
           STL++ GALD + VV+  E WRL++ MWLHAG+IHL+ NM  ++  GIRLEQ+FGF++IG
Sbjct: 78  STLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIG 137

Query: 157 CLYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFI 216
            +Y++SGFGGS+LS+L +  S    ISVGASGAL GL+GAMLSEL+TNWTIY +K  A +
Sbjct: 138 LIYLISGFGGSILSALFLQKS----ISVGASGALLGLMGAMLSELLTNWTIYKSKLCALL 197

Query: 217 SLILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRK 276
           S + IIA+NLA+G +P +DN AHIGG ++GF LGFILL+QPQ G+   +   +    + +
Sbjct: 198 SFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRN-SSQYGARAR 257

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLY 306
           SK+   QY L  VA +L++ G   GL  L+
Sbjct: 258 SKYNPCQYVLFFVAAVLVVAGLTVGLVMLF 282

[Close]

BLAST of Carg18819 vs. Swiss-Prot
Match: sp|O82756|RBL7_ARATH (RHOMBOID-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBL7 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-64
Identity = 133/271 (49.08%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 37  WFPWLVPLTFLANIAMFSFTLYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSIS 96
           W  W++P+  +AN+ +F   +Y N+CP     +RCL    LGRFSF+ F+ NPLLGPS S
Sbjct: 29  WRSWIIPIVVIANVVVFVVVMYYNDCPHK--SHRCL-AKFLGRFSFESFKSNPLLGPSSS 88

Query: 97  TLKRYGALDKEAVVEHGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGC 156
           TL++ GAL    +V   + WRL++CMWLHAGVIHLLANM  + +IG+RLEQ+FGF+++G 
Sbjct: 89  TLEKMGALAWGKIVHKRQVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGT 148

Query: 157 LYVLSGFGGSLLSSLSINPSENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFIS 216
           +Y++SGF GS+LS L +  +    ISVGAS ALFGLLGAMLSEL+ NWT Y NK  A + 
Sbjct: 149 IYLVSGFCGSILSCLFLEDA----ISVGASSALFGLLGAMLSELLINWTTYDNKGVAIVM 208

Query: 217 LILIIALNLAVGFIPHIDNSAHIGGFVSGFLLGFILLIQPQFGY-VNHKYIPAGADVKRK 276
           L++I+ +NL +G +P +DN AHIGGF         LLI PQF +  N   +  G  V  K
Sbjct: 209 LLVIVGVNLGLGTLPPVDNFAHIGGFFXXXXXXXXLLIHPQFEWEENQVSLMPGTIV--K 268

Query: 277 SKHKCYQYFLLIVALILLIFGYASGLTRLYK 307
            K+   Q  L IVA I+ + G+ SGL  L++
Sbjct: 269 PKYNTCQLVLCIVASIVFVAGFTSGLVILFR 290

[Close]

BLAST of Carg18819 vs. TrEMBL
Match: tr|A0A0A0K8T6|A0A0A0K8T6_CUCSA (Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G432610 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 7.0e-135
Identity = 249/296 (84.12%), Postives = 267/296 (90.20%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYEN 60
           MGKR P   +ESMSY+V KP+SMPXXXXXXXXXXXPWFPWLVPL FL N+ MF F LYEN
Sbjct: 1   MGKRPPSVHVESMSYDVHKPISMPXXXXXXXXXXXPWFPWLVPLIFLVNVGMFIFMLYEN 60

Query: 61  NCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLVS 120
           NCPA  G NRCL YPELGRFSFQPF ENPLLGPSI+ LKRYGALDKEAV+E GEGWRLVS
Sbjct: 61  NCPAISGRNRCLLYPELGRFSFQPFHENPLLGPSITILKRYGALDKEAVLERGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFL+IGCLYVLSGFGGSLLSS+S+NP+ENPT
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIY+NKCAA +SLILIIALNLAVGFIPH+DNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG 240

Query: 241 GFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFG 297
           GF         LLI+PQFGYVN KYIPAG+DVKRKSKHKCYQY LLI+AL+LL+FG
Sbjct: 241 GFXXXXXXXXXLLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 296

[Close]

BLAST of Carg18819 vs. TrEMBL
Match: tr|A0A1S3CDZ1|A0A1S3CDZ1_CUCME (Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103499793 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.5e-134
Identity = 248/297 (83.50%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MGKRSPPGDIESMSYEVRKPLS-MPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYE 60
           MGKR P  D+ESMSY + KP++ M XXXXXXXXXXXPWFPWLVPL FL N+ MF FTLY+
Sbjct: 1   MGKRPPSVDMESMSYNIHKPITIMXXXXXXXXXXXXPWFPWLVPLIFLVNVGMFIFTLYK 60

Query: 61  NNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLV 120
           NNCPA  GGNRCL YPELGRFSFQPF ENPLLGP+IS L+RYGALDKEAVVE GEGWRLV
Sbjct: 61  NNCPAITGGNRCLLYPELGRFSFQPFHENPLLGPTISILRRYGALDKEAVVERGEGWRLV 120

Query: 121 SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENP 180
           SC WLHAGVIHLLANMLSLLFIG+RLEQEFGFLKIGCLYVLSGFGGSLLSS+S+NP+ENP
Sbjct: 121 SCTWLHAGVIHLLANMLSLLFIGVRLEQEFGFLKIGCLYVLSGFGGSLLSSISLNPAENP 180

Query: 181 TISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHI 240
           TISVGASGALFGLLGAMLSELITNWTIY+NKCAA +SLILIIALNLAVGF+PH+DNSAHI
Sbjct: 181 TISVGASGALFGLLGAMLSELITNWTIYANKCAALMSLILIIALNLAVGFVPHVDNSAHI 240

Query: 241 GGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFG 297
           GGF         LLI+PQFGYVNHKYIP G+DVKRKSKHKCYQYFLLIVAL+LL+FG
Sbjct: 241 GGFXXXXXXXXXLLIRPQFGYVNHKYIPPGSDVKRKSKHKCYQYFLLIVALLLLVFG 297

[Close]

BLAST of Carg18819 vs. TrEMBL
Match: tr|A0A2P5EX57|A0A2P5EX57_9ROSA (Rhomboid-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_141510 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.5e-113
Identity = 214/308 (69.48%), Postives = 247/308 (80.19%), Query Frame = 0


Query: 1   MGKRS-PPGDIESMSYEVRKPLSMP--XXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTL 60
           MGK S  P DIE   ++ R   S P  XXXX       PWFPWLVPL F+ANIAMF +++
Sbjct: 1   MGKWSTSPPDIEKGPHKTRPSHSRPXXXXXXFCPPTPKPWFPWLVPLIFVANIAMFVYSM 60

Query: 61  YENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWR 120
           Y NNCP   G ++CL YP L RFSFQPFQENPLLGPS +TLK+ GALD+  VVE+G+GWR
Sbjct: 61  YLNNCPLTTGEDQCLLYPYLKRFSFQPFQENPLLGPSTTTLKQLGALDRNLVVENGQGWR 120

Query: 121 LVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSE 180
           L+SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFL+IG LYV SGFGGSLLSSLS+NPSE
Sbjct: 121 LLSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGVLYVFSGFGGSLLSSLSLNPSE 180

Query: 181 NPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSA 240
            PTISVGASGALFGLLGAMLSEL+TNWTIY+NKCAA ++L+ II LNLA GF+PH+DNSA
Sbjct: 181 RPTISVGASGALFGLLGAMLSELLTNWTIYANKCAALLTLVFIIVLNLAFGFLPHVDNSA 240

Query: 241 HIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFGY 300
           HIGGF         LLI+PQFGYV+ KYIP+G ++KRK+KHKCYQY L I AL+ L+ GY
Sbjct: 241 HIGGFXXXXXXXXXLLIRPQFGYVSGKYIPSGYNLKRKTKHKCYQYVLWISALLALLLGY 300

Query: 301 ASGLTRLY 306
           A  L +L+
Sbjct: 301 AYCLVKLF 308

[Close]

BLAST of Carg18819 vs. TrEMBL
Match: tr|W9R3U9|W9R3U9_9ROSA (Rhomboid-like protein OS=Morus notabilis OX=981085 GN=L484_025794 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 9.9e-113
Identity = 208/297 (70.03%), Postives = 238/297 (80.13%), Query Frame = 0


Query: 1   MGKRS-PPGDIESMSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFTLYE 60
           MGK S  P DIE    + R   S P           PWFPWLVPL F+ANIAMF +++Y 
Sbjct: 1   MGKWSTSPPDIEKGRQKGR--TSQPPPPHYCPPTAKPWFPWLVPLIFVANIAMFVYSMYL 60

Query: 61  NNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGWRLV 120
           NNCP+  G ++CLFYP L RFSFQPF+ENPLLGPS +TLKR GALD++ VVE+G+GWRL+
Sbjct: 61  NNCPSTTGADQCLFYPSLKRFSFQPFRENPLLGPSTTTLKRLGALDRKLVVENGQGWRLL 120

Query: 121 SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPSENP 180
           SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFL+IG LYVL+GFGGSLLSSLS++PS+ P
Sbjct: 121 SCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGILYVLAGFGGSLLSSLSLSPSDRP 180

Query: 181 TISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNSAHI 240
           TISVGASGALFGLLGAMLSEL+TNWTIY+NKCAA ++L+LII LNLA GF+PH+DNSAHI
Sbjct: 181 TISVGASGALFGLLGAMLSELLTNWTIYANKCAALLTLVLIIVLNLAFGFLPHVDNSAHI 240

Query: 241 GGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVKRKSKHKCYQYFLLIVALILLIFG 297
           GGF         LLI+PQFGYV+ KYIPAG DV RK KHKCYQY L   AL+ LI G
Sbjct: 241 GGFXXXXXXXXXLLIRPQFGYVSSKYIPAGYDVIRKPKHKCYQYVLWFTALLALILG 295

[Close]

BLAST of Carg18819 vs. TrEMBL
Match: tr|A0A061GHE3|A0A061GHE3_THECC (Rhomboid-like protein OS=Theobroma cacao OX=3641 GN=TCM_028224 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 5.4e-111
Identity = 214/311 (68.81%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MGKRSPP---GDIES-MSYEVRKPLSMPXXXXXXXXXXXPWFPWLVPLTFLANIAMFSFT 60
           MGK  PP    DIE+  +Y+        XXXXXXXX   PWF WLVPL F+ANI MF  T
Sbjct: 1   MGKGLPPPPSSDIETGRTYKXXXXXXXXXXXXXXXXAPKPWFAWLVPLVFVANIVMFVLT 60

Query: 61  LYENNCPAAIGGNRCLFYPELGRFSFQPFQENPLLGPSISTLKRYGALDKEAVVEHGEGW 120
           +Y NNCPA  G ++CLFY  LGRFSF P ++NPLLGPS STLK  GALD + VVE  + W
Sbjct: 61  MYINNCPAKTGADKCLFYDYLGRFSFHPIKDNPLLGPSFSTLKELGALDWKLVVESKQAW 120

Query: 121 RLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLKIGCLYVLSGFGGSLLSSLSINPS 180
           RL+SC+WLHAGVIHL+ANM+SLLFIGIRLEQEFGF +IG LYVLSGFGGSL+S+L+ +  
Sbjct: 121 RLISCIWLHAGVIHLVANMMSLLFIGIRLEQEFGFFRIGLLYVLSGFGGSLMSALA-SAG 180

Query: 181 ENPTISVGASGALFGLLGAMLSELITNWTIYSNKCAAFISLILIIALNLAVGFIPHIDNS 240
              TISVGASGALFGLLGAMLSELITNWT Y+NKCAA ++L+LII+LNLAVGF+PH+DNS
Sbjct: 181 RKQTISVGASGALFGLLGAMLSELITNWTNYANKCAALLTLVLIISLNLAVGFLPHVDNS 240

Query: 241 AHIGGFVSGFLLGFILLIQPQFGYVNHKYIPAGADVK-RKSKHKCYQYFLLIVALILLIF 300
           AHIGGF+SGFL+GFILLI+PQFGYV+ K+IP G ++K +K KHKCYQY L I+AL+LLI 
Sbjct: 241 AHIGGFISGFLVGFILLIRPQFGYVSRKHIPPGYEIKHKKPKHKCYQYLLWIIALVLLIT 300

Query: 301 GYASGLTRLYK 307
           GYA+GLTRL+K
Sbjct: 301 GYATGLTRLFK 310

The following BLAST results are available for this feature:

BLAST of Carg18819 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964405.1	9.9e-173	100.00	RHOMBOID-like protein 5 [Cucurbita moschata]	[more]
XP_023514894.1	4.9e-172	99.37	RHOMBOID-like protein 5 [Cucurbita pepo subsp. pepo]	[more]
XP_023000373.1	1.6e-170	98.74	RHOMBOID-like protein 5 isoform X1 [Cucurbita maxima]	[more]
XP_022147001.1	5.4e-147	83.28	RHOMBOID-like protein 5 [Momordica charantia]	[more]
XP_022991576.1	3.7e-143	83.91	RHOMBOID-like protein 5 [Cucurbita maxima]	[more]

BLAST of Carg18819 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52580.1	7.0e-96	57.47	RHOMBOID-like protein 5	[more]
AT2G29050.1	6.7e-91	63.10	RHOMBOID-like 1	[more]
AT3G53780.2	2.4e-80	54.65	RHOMBOID-like protein 4	[more]
AT1G12750.1	5.7e-74	51.48	RHOMBOID-like protein 6	[more]
AT4G23070.1	9.8e-66	49.08	RHOMBOID-like protein 7	[more]

BLAST of Carg18819 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SSR0\|RBL5_ARATH	1.3e-94	57.47	RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1	[more]
sp\|Q0WQX7\|RBL1_ARATH	1.2e-89	63.10	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
sp\|F4JBM4\|RBL4_ARATH	4.3e-79	54.65	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]
sp\|Q8VZ48\|RBL6_ARATH	1.0e-72	51.48	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
sp\|O82756\|RBL7_ARATH	1.8e-64	49.08	RHOMBOID-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBL7 PE=3 SV=1	[more]

BLAST of Carg18819 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K8T6\|A0A0A0K8T6_CUCSA	7.0e-135	84.12	Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G432610 PE=3 SV=1	[more]
tr\|A0A1S3CDZ1\|A0A1S3CDZ1_CUCME	3.5e-134	83.50	Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103499793 PE=3 SV=1	[more]
tr\|A0A2P5EX57\|A0A2P5EX57_9ROSA	1.5e-113	69.48	Rhomboid-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_141510 PE=3 SV=...	[more]
tr\|W9R3U9\|W9R3U9_9ROSA	9.9e-113	70.03	Rhomboid-like protein OS=Morus notabilis OX=981085 GN=L484_025794 PE=3 SV=1	[more]
tr\|A0A061GHE3\|A0A061GHE3_THECC	5.4e-111	68.81	Rhomboid-like protein OS=Theobroma cacao OX=3641 GN=TCM_028224 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18819-RA	Carg18819-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	G3DSA:1.20.1540.10		coord: 85..257 e-value: 2.3E-38 score: 133.6
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 111..255 e-value: 5.0E-41 score: 140.1
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 1..314
None	No IPR available	PANTHER	PTHR22936:SF64	RHOMBOID-LIKE PROTEIN 5	coord: 1..314
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 93..257 coord: 35..58

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18819	Cla015372	Watermelon (97103) v1	carwmB0744
Carg18819	Csa7G432610	Cucumber (Chinese Long) v2	carcuB0762
Carg18819	MELO3C023414	Melon (DHL92) v3.5.1	carmeB0740
Carg18819	ClCG09G002840	Watermelon (Charleston Gray)	carwcgB0724
Carg18819	CSPI07G20650	Wild cucumber (PI 183967)	carcpiB0779
Carg18819	Cucsa.105370	Cucumber (Gy14) v1	carcgyB0837
Carg18819	CmaCh08G006770	Cucurbita maxima (Rimu)	carcmaB1046
Carg18819	CmoCh08G006420	Cucurbita moschata (Rifu)	carcmoB1018
Carg18819	CmoCh17G008280	Cucurbita moschata (Rifu)	carcmoB1016
Carg18819	Lsi02G027190	Bottle gourd (USVL1VR-Ls)	carlsiB683
Carg18819	Cp4.1LG17g05690	Cucurbita pepo (Zucchini)	carcpeB1051
Carg18819	Cp4.1LG12g07640	Cucurbita pepo (Zucchini)	carcpeB1050
Carg18819	MELO3C023414.2	Melon (DHL92) v3.6.1	carmedB0753
Carg18819	CsaV3_7G032490	Cucumber (Chinese Long) v3	carcucB0782
Carg18819	Cla97C09G165000	Watermelon (97103) v2	carwmbB0784
Carg18819	Bhi09G000026	Wax gourd	carwgoB0880

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18819	Carg09581	Silver-seed gourd	carcarB597

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18819	Wax gourd	carwgoB0879
Carg18819	Silver-seed gourd	carcarB143
Carg18819	Silver-seed gourd	carcarB234
Carg18819	Silver-seed gourd	carcarB596
Carg18819	Cucumber (Gy14) v2	carcgybB0739
Carg18819	Cucumber (Gy14) v2	carcgybB0741
Carg18819	Cucurbita maxima (Rimu)	carcmaB1043
Carg18819	Cucurbita maxima (Rimu)	carcmaB1044
Carg18819	Cucurbita maxima (Rimu)	carcmaB1045
Carg18819	Cucurbita moschata (Rifu)	carcmoB1014
Carg18819	Cucurbita moschata (Rifu)	carcmoB1017
Carg18819	Cucurbita pepo (Zucchini)	carcpeB1049
Carg18819	Cucurbita pepo (Zucchini)	carcpeB1053
Carg18819	Cucurbita pepo (Zucchini)	carcpeB1054
Carg18819	Wild cucumber (PI 183967)	carcpiB0777
Carg18819	Cucumber (Chinese Long) v3	carcucB0780
Carg18819	Bottle gourd (USVL1VR-Ls)	carlsiB685
Carg18819	Melon (DHL92) v3.5.1	carmeB0742
Carg18819	Melon (DHL92) v3.6.1	carmedB0755
Carg18819	Watermelon (Charleston Gray)	carwcgB0725
Carg18819	Watermelon (97103) v1	carwmB0746
Carg18819	Watermelon (97103) v2	carwmbB0781