Carg18808 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAACTGGATTCTCGCAGGTTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGTCGGTAACAACGCCGCTGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGAGTTCGAGGAGAAAAAAATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCAGCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGGATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTCACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATTTTGCGGCAGAAGGTTGAGGACGATGCTTCGAAGCCTCGGACAGTTTCCGATTCGAAGTTTTTTTTTTTTTGGGTAAATTCTGTTACATTAATCTCCAATGTTACATTAATCTCAAATGTTACATTAATGTGCAGAAATTCAAATAAACTCCGATCTAAATTTACCTTCTGAAATTTATAATCAAAACTTTAGACCTACAAATTTGGAAGGAAAATGGCTGAGAGTGAGTTTATAACAAGACAAGGAGAGATGTTGATTGAACTTCTTACATATTTGGGCCCATCGAACCCACTTGGAATTTAGTACATAATTTCTGTTTAAATTGGGAGCTGAGTGTGTCAGTGAGAGAAGATTTCTCCATAGATTATATTATTTTGTACATAATTTCTGTTTAAATTGGGAGCTGAGTGACTCTGATAAAATTCAATTTTAAACCGAGAATGATGAAGGTCTTGTTACTGTATGTGGCTTTGGACGAGATTATATTATTGTCTTTCAGTTTAAATGGGGAACGAAGAGGGCCTTGA ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAACTGGATTCTCGCAGGTTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGTCGGTAACAACGCCGCTGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGAGTTCGAGGAGAAAAAAATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCAGCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGGATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTCACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATTTTGCGGCAGAAGGTTGAGGACGATGCTTCGAAGCCTCGGACAGTTTCCGATTCGAATTTAAATGGGGAACGAAGAGGGCCTTGA ATGCCTAGAAAATTGCGAAAATCGCTGCTAGGTTACCTCTCGAAGATCAAAAGGCCAACGCCTCAGCTTCAATTTCCTAATCCCCAATCATTCAAATCTTCAAAAAACTGGATTCTCGCAGGTTGTAAGCATCCGAAAACACTGTCGTTCGCCATCGATCGGAAGAATGGCGACGGCGTCGGTAACAACGCCGCTGCGGACCCCGCCGCTGCCGCTACTCTCTCCGATGTCGATCGATTCCTCGTTGAGAACTTCCGATCGTTGTACATGAAAGAGGAGGAAGAGTTCGAGGAGAAAAAAATAGAAGAAGAAGGTCGAGAGAGCAAGAAGCAAGGAGTGGTTTCACCTGATTCGCCGGTTGATTCGAACGGCGGATCTCACCGATTCTTCTTCTCCCCTGGCTTGTCCGGATCTCCAGCGAACGATTCTCTGACGGAATCGTCGGAAAATGTAGGATCGAGTTCTTCATCTTTGAACGGTGAAAATCAGAGCAAGGATGTGAAACTTCCGAACGATTGCATCGCGATTTTGAGGTACTCGCCGAATCCGCCTGAGGAATTTCGGCGAGCGATGAAAGAGATGATGGATTCTCACATGAAACAGCAGGAGAAAGTGGATTGGGAGTTTATGGAAGAACTTCTGTTCTCTTTTCTAAATCTGAACGATAAAAAGTCGCATAAACACATACTTAATGCTTTCGTTGATTTGATAGTGATTTTGCGGCAGAAGGTTGAGGACGATGCTTCGAAGCCTCGGACAGTTTCCGATTCGAATTTAAATGGGGAACGAAGAGGGCCTTGA MPRKLRKSLLGYLSKIKRPTPQLQFPNPQSFKSSKNWILAGCKHPKTLSFAIDRKNGDGVGNNAAADPAAAATLSDVDRFLVENFRSLYMKEEEEFEEKKIEEEGRESKKQGVVSPDSPVDSNGGSHRFFFSPGLSGSPANDSLTESSENVGSSSSSLNGENQSKDVKLPNDCIAILRYSPNPPEEFRRAMKEMMDSHMKQQEKVDWEFMEELLFSFLNLNDKKSHKHILNAFVDLIVILRQKVEDDASKPRTVSDSNLNGERRGP
BLAST of Carg18808 vs. NCBI nr
Match: XP_022964363.1 (transcription repressor OFP14-like [Cucurbita moschata]) HSP 1 Score: 486.1 bits (1250), Expect = 7.6e-134 Identity = 251/254 (98.82%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of Carg18808 vs. NCBI nr
Match: XP_023514747.1 (transcription repressor OFP14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 473.0 bits (1216), Expect = 6.6e-130 Identity = 245/254 (96.46%), Postives = 245/254 (96.46%), Query Frame = 0
BLAST of Carg18808 vs. NCBI nr
Match: XP_023000384.1 (transcription repressor OFP14-like [Cucurbita maxima]) HSP 1 Score: 471.9 bits (1213), Expect = 1.5e-129 Identity = 246/255 (96.47%), Postives = 249/255 (97.65%), Query Frame = 0
BLAST of Carg18808 vs. NCBI nr
Match: XP_008462151.1 (PREDICTED: transcription repressor OFP14 [Cucumis melo]) HSP 1 Score: 343.2 bits (879), Expect = 7.9e-91 Identity = 186/259 (71.81%), Postives = 216/259 (83.40%), Query Frame = 0
BLAST of Carg18808 vs. NCBI nr
Match: XP_022146091.1 (transcription repressor OFP14 [Momordica charantia]) HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89 Identity = 179/255 (70.20%), Postives = 210/255 (82.35%), Query Frame = 0
BLAST of Carg18808 vs. TAIR10
Match: AT1G79960.1 (ovate family protein 14) HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36 Identity = 110/276 (39.86%), Postives = 149/276 (53.99%), Query Frame = 0
BLAST of Carg18808 vs. TAIR10
Match: AT5G04820.1 (ovate family protein 13) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Carg18808 vs. TAIR10
Match: AT1G05420.1 (ovate family protein 12) HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Carg18808 vs. TAIR10
Match: AT2G36050.1 (ovate family protein 15) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Carg18808 vs. TAIR10
Match: AT2G32100.1 (ovate family protein 16) HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06 Identity = 24/66 (36.36%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Carg18808 vs. Swiss-Prot
Match: sp|Q9S7T5|OFP14_ARATH (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 9.4e-35 Identity = 110/276 (39.86%), Postives = 149/276 (53.99%), Query Frame = 0
BLAST of Carg18808 vs. Swiss-Prot
Match: sp|Q9FMC8|OPF13_ARATH (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.7e-07 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Carg18808 vs. Swiss-Prot
Match: sp|F4I8R6|OFP12_ARATH (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Carg18808 vs. Swiss-Prot
Match: sp|Q9SJ45|OPF15_ARATH (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Carg18808 vs. Swiss-Prot
Match: sp|Q9SKY9|OFP16_ARATH (Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 7.7e-05 Identity = 24/66 (36.36%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Carg18808 vs. TrEMBL
Match: tr|A0A1S3CGB3|A0A1S3CGB3_CUCME (transcription repressor OFP14 OS=Cucumis melo OX=3656 GN=LOC103500574 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 5.2e-91 Identity = 186/259 (71.81%), Postives = 216/259 (83.40%), Query Frame = 0
BLAST of Carg18808 vs. TrEMBL
Match: tr|A0A0A0KC30|A0A0A0KC30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446730 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70 Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 0
BLAST of Carg18808 vs. TrEMBL
Match: tr|A0A2P4H1H9|A0A2P4H1H9_QUESU (Transcription repressor ofp14 OS=Quercus suber OX=58331 GN=CFP56_68032 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 8.5e-49 Identity = 133/279 (47.67%), Postives = 174/279 (62.37%), Query Frame = 0
BLAST of Carg18808 vs. TrEMBL
Match: tr|A0A1R3H909|A0A1R3H909_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_30372 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48 Identity = 124/299 (41.47%), Postives = 173/299 (57.86%), Query Frame = 0
BLAST of Carg18808 vs. TrEMBL
Match: tr|A0A2P4KGQ6|A0A2P4KGQ6_QUESU (Transcription repressor ofp14 OS=Quercus suber OX=58331 GN=CFP56_27618 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 133/279 (47.67%), Postives = 175/279 (62.72%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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