Carg18696 (gene) Silver-seed gourd

Overview
NameCarg18696
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein trichome birefringence-like 14
LocationCucurbita_argyrosperma_scaffold_139 : 189671 .. 192924 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTTCGGATCTAATCATTTTGAGAGGAGAGCTCTGTAGTTCTCTCTGAAAATCGAAAATGCCTCAGATTTTCTCCTAAGAAACAGCGTCAGTATCTGAATCTCCCAGTTTCCCTCATTTGGGTGCGTGATTTTCTTGTTTGATTCAGATTCTTTTAGTGCAATCTCCACTGTTTTAGCTTTTGCTTCCTTACCCTCTTCTTATTTTCCAAGAATTGCTAATGGGTCGTGTCGATCGGTGTGTCAATCGAGCGAAATCACATTTGGGTTATGCTCGATTGTGGCGCCTCTGTTTCTGCAGGACTCTGTTTGATCGAGTTAGCTTTGCATAGCTGATGATCTTAGCCTCTACTTACCAAATTGATATCTGTTTGAGAAAACCATGTGGCTGTTACCTTTTTCTTAGCTATTATAATGGCATTTAGCAGCAATCCATGGCTCATTTGCTTTCATAATGTTACTTAGGGAAATGGAGTTGTGTTTTTGTTTACTGGTTTGTCTGAAAATTTCTTATGTCGACACAGATGTATAGAGAGGCATATGTTGTCTATCAAATGAGGGAACATTTTCAATTCATGTGATATAAGCAAGAGATGAAAGGGGGGAACATCATCATGGTGAGGGGGGGACATCTTTCCATTGCCATGGTTGTTCTTATGTTTACAAGCATATTGTTATGGGGTTGGGATAAAAGCTATTTTGCTAGTTTTCTTCCACTGACAAGACAGCAGTATATGATACCACTTTCAGGTATTTTCCCAACTGATCATATTCTTTCTACCATTTAAGAAGTTTCTTGTGAATCTATGTTAAGAATGGGATGAAAATGGTAGAATTCTAAGCCTTCTTTCTTTGGCAACTTCACTTGAATGCTTAATTGTCATGAACTTTAATGATTTTCATTTATCTCTGTCTCGTTTTCTCTTAATTGTTCATAGCATTGTGTTTGTTGATTAATTTTCTATATCATGGCTTAGAATATGTAGTGGCCGTGTCAAATAGTTCCTCAACACCAAAGGATGAAATGGTTAAGTCAGAGAACAAAATGAAGGGAAGAAGTAATAATACCAATGAAAAAGAACAACCAGGAAAAGGTTCAGACTACTTTGATGCTGATTCTATCTCCAAGCCTACTCCTATCTCCAAAGGTAGAGTTTAGATTCTCAAAGTGTTAGGCACATATGTGTTTGTTCTTCCTAGTTTTACACTGAATTCAGCTTTTGATCTGTTTAAAAATGATATCCAGTTCATATCTAAGATATTGCTGCTCTTTCAGTTTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAACAGGCGGCCATGGTATTCCGGGTTAGGATGCAAACAATGGCTATCAATAATGTGGGCCTGTAGACTTACAAAAAGAAAGGACTTTTCTTATGAAGGATATAGGTGGCAACCGGAAAATTGCTACATGCCTGAGTTTGAGCGTTCATCATTCCTTAGAAGGTACTTGAGATTTTATCCCTCCATGAGCGAAATGCTTGTGTGTATTGTTTGCTTAAACCTTGTTAGTTCTAGAGATTTGACTGCCATTTTGGTTCTTAGAATGCAGAACAAAACACTTGCATTTATAGGAGATTCATTAGGTAGGCAGCAGTTTCAATCTTTAATGTGTATGCTCACTGGCGGTGAAGAGAGCCCTGAAGTCGAAGACGTGGGGAAGGAATATGGTCTAGCTAAAGCTCCGGGGGCTCGTCGACCCGACGGATGGGTGTATCGGTTTCCAGACACGAACACCACCATTCTATACTACTGGTCAGCCAGCCTCTCTGATCTAGAACCTATTAATAGAACAGATCCAGCAACAAATATTGCAATGCATTTGGATCAACCCCCAGCTTTCATGAGAAAGTTCCTCCATGAGTTCAATGTGTTGGTTTTGAATACAGGACACCATTGGAATAGGGGAAAACTTGAAGCAAATAGGTGGGTGATGTATGTTGATGGAAAACCAGTGGAGGAAAATAAGCCTTTGGATATGGGGAAGGCCAAGAACTTGACTGTATACAGCATTGCCAAATGGCTCGACTCGCAACTTCCCCGACATCGACGTAATCTAAAAGTCTTCTTTAGGACAATTTCGCCAAGGCATTTCTTCAATGGGGATTGGAACACCGGAGGATCCTGTGATAATATGATTCCTATGTCTGGTGGGAGTGAGGTTGTCCAAGATGGATCTAGTGACATTGTTGTTGAAAGTGCTTTAAAGGGTACCAAGGTGAAGATCCTAGACATAACTGCCATCTCTCAGCTGCGCGACGAAGGGCACGTATCGCGCTATACCCGTCGAGCAATCTTAAACACAAGTGATTGCTTGCATTGGTGCTTGCCTGGCATACCAGACACATGGAATGAACTGCTACTTGCACAGATATAGTCTTGCATATCAGTGCTTTCAGAGTATACAAGATTCTTAGTAATGGTTATAGCTGAGAATCTATCAATCTACTTCAAATAGGCTGCCTGAAAGTACAATTGAAAGGATGTTACATGTTCTTCGTCCATGTATTCGAGAAAGCGAAGAAGCCGAGCTATTTCGAGTCGTTACAATATGTGTGGTGAAAAGTTTGCATCAATGGCTGCTCTGATCCATGAAAGGCAAACCCCTTCAAGTAAGGCTTTCTGCTTATTCCTTCTTCTTTTGATATGCATCATTGAGAATCCTGATTTCTTATGAGAATGGTTTGGGGATTGAATAGTAATGATCACTGTTGGCGATTTGGAACAATTTTTTAAGCACTTAGTTGCATGCTTTTTATATGTTTTAATCGTGTAACCATTAGAGAAACCAGGAAATAAAAATGTCACATGTATAAGTCTCCAAATAGGAACAAATCAATCCCAAAAGAACAGGAAAAAAGAACAGAGCTAAGAACTAGAAGAACATGTTCTACAAACACCCACAAGCCAAAAATATCAAAATCAATGGATCCAACACAAGGAAAAGCTTCATGTTCTTCAGCTTCGATGAATCGATTCAAGAACAGAGTTGATAATGAAAATCACAGGCGAGACAGATTTGCAGAAACTGGGAAATAAGAGACGATTATCGGAGCTTGAGGTGACTGTGAATCAGATTTTGGTTTGTGTTTGGAGGGCTGTTGTTTGTGTTTCATGTTTGAATGTTCTTCACCATGGGAGACCTTTGAAGATAGAGAAGGAAGGAAGCAACCCAGGAGAGCTGAGACTATGGGAGAAGAAGGCATCTTATTGCGCTTTGGGCTTTTAG

mRNA sequence

TACTTCGGATCTAATCATTTTGAGAGGAGAGCTCTGTAGTTCTCTCTGAAAATCGAAAATGCCTCAGATTTTCTCCTAAGAAACAGCGTCAGTATCTGAATCTCCCAGTTTCCCTCATTTGGATGTATAGAGAGGCATATGTTGTCTATCAAATGAGGGAACATTTTCAATTCATGTGATATAAGCAAGAGATGAAAGGGGGGAACATCATCATGGTGAGGGGGGGACATCTTTCCATTGCCATGGTTGTTCTTATGTTTACAAGCATATTGTTATGGGGTTGGGATAAAAGCTATTTTGCTAGTTTTCTTCCACTGACAAGACAGCAGTATATGATACCACTTTCAGAATATGTAGTGGCCGTGTCAAATAGTTCCTCAACACCAAAGGATGAAATGGTTAAGTCAGAGAACAAAATGAAGGGAAGAAGTAATAATACCAATGAAAAAGAACAACCAGGAAAAGGTTCAGACTACTTTGATGCTGATTCTATCTCCAAGCCTACTCCTATCTCCAAAGCTTTTGATCTGTTTAAAAATGATATCCAGTTCATATCTAAGATATTGCTGCTCTTTCAGTTTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAACAGGCGGCCATGGTATTCCGGGTGGCAACCGGAAAATTGCTACATGCCTGAGTTTGAGCGTTCATCATTCCTTAGAAGGCGAGACAGATTTGCAGAAACTGGGAAATAAGAGACGATTATCGGAGCTTGAGGTGACTGTGAATCAGATTTTGGTTTGTGTTTGGAGGGCTGTTGTTTGTGTTTCATGTTTGAATGTTCTTCACCATGGGAGACCTTTGAAGATAGAGAAGGAAGGAAGCAACCCAGGAGAGCTGAGACTATGGGAGAAGAAGGCATCTTATTGCGCTTTGGGCTTTTAG

Coding sequence (CDS)

ATGAAAGGGGGGAACATCATCATGGTGAGGGGGGGACATCTTTCCATTGCCATGGTTGTTCTTATGTTTACAAGCATATTGTTATGGGGTTGGGATAAAAGCTATTTTGCTAGTTTTCTTCCACTGACAAGACAGCAGTATATGATACCACTTTCAGAATATGTAGTGGCCGTGTCAAATAGTTCCTCAACACCAAAGGATGAAATGGTTAAGTCAGAGAACAAAATGAAGGGAAGAAGTAATAATACCAATGAAAAAGAACAACCAGGAAAAGGTTCAGACTACTTTGATGCTGATTCTATCTCCAAGCCTACTCCTATCTCCAAAGCTTTTGATCTGTTTAAAAATGATATCCAGTTCATATCTAAGATATTGCTGCTCTTTCAGTTTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAACAGGCGGCCATGGTATTCCGGGTGGCAACCGGAAAATTGCTACATGCCTGAGTTTGAGCGTTCATCATTCCTTAGAAGGCGAGACAGATTTGCAGAAACTGGGAAATAAGAGACGATTATCGGAGCTTGAGGTGACTGTGAATCAGATTTTGGTTTGTGTTTGGAGGGCTGTTGTTTGTGTTTCATGTTTGAATGTTCTTCACCATGGGAGACCTTTGAAGATAGAGAAGGAAGGAAGCAACCCAGGAGAGCTGAGACTATGGGAGAAGAAGGCATCTTATTGCGCTTTGGGCTTTTAG

Protein sequence

MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKAFDLFKNDIQFISKILLLFQFATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQILVCVWRAVVCVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF
Homology
[Close]
BLAST of Carg18696 vs. NCBI nr
Match: XP_022954312.1 (protein trichome birefringence-like 14 isoform X1 [Cucurbita moschata] >XP_022954313.1 protein trichome birefringence-like 14 isoform X1 [Cucurbita moschata])

HSP 1 Score: 209.9 bits (533), Expect = 9.4e-51
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN
Sbjct: 1   MKGGNIIMVRGGHLSIAMVVLMFTTILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60

Query: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKAFDLFK 116
           +SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISK  +  K
Sbjct: 61  NSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKVCNYAK 115

[Close]
BLAST of Carg18696 vs. NCBI nr
Match: XP_023548323.1 (protein trichome birefringence-like 14 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548324.1 protein trichome birefringence-like 14 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.6 bits (527), Expect = 4.7e-50
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNII V+GGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN
Sbjct: 1   MKGGNIIRVKGGHLSIAMVVLMFTTILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60

Query: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKAFDLFK 116
           SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISK  +  K
Sbjct: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKVCNYAK 115

[Close]
BLAST of Carg18696 vs. NCBI nr
Match: XP_022954314.1 (protein trichome birefringence-like 14 isoform X2 [Cucurbita moschata])

HSP 1 Score: 198.4 bits (503), Expect = 2.8e-47
Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLS   VAVSN
Sbjct: 1   MKGGNIIMVRGGHLSIAMVVLMFTTILLWGWDKSYFASFLPLTRQQYMIPLS---VAVSN 60

Query: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKAFDLFK 116
           +SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISK  +  K
Sbjct: 61  NSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKVCNYAK 112

[Close]
BLAST of Carg18696 vs. NCBI nr
Match: XP_022954315.1 (protein trichome birefringence-like 14 isoform X3 [Cucurbita moschata])

HSP 1 Score: 197.2 bits (500), Expect = 6.3e-47
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN
Sbjct: 1   MKGGNIIMVRGGHLSIAMVVLMFTTILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60

Query: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISK 104
           +SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISK
Sbjct: 61  NSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISK 103

[Close]
BLAST of Carg18696 vs. NCBI nr
Match: XP_023548325.1 (protein trichome birefringence-like 14 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNII V+GGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLS   VAVSN
Sbjct: 1   MKGGNIIRVKGGHLSIAMVVLMFTTILLWGWDKSYFASFLPLTRQQYMIPLS---VAVSN 60

Query: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKAFDLFK 116
           SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISK  +  K
Sbjct: 61  SSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKVCNYAK 112

[Close]
BLAST of Carg18696 vs. TrEMBL
Match: tr|A0A1S3CEB0|A0A1S3CEB0_CUCME (protein trichome birefringence-like 14 OS=Cucumis melo OX=3656 GN=LOC103499895 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.7e-29
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGNI  +RGG+LSIA+VVLMFT+ILLW WDK   A FL LTR+QYMIP+SEYVV VSN
Sbjct: 1   MKGGNITRLRGGYLSIALVVLMFTTILLWAWDKKSIAGFLSLTREQYMIPVSEYVVGVSN 60

Query: 61  SSST---PKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTP 107
           SS T   PK+E+VKSE+KMK RS NT+E   P + S Y DADS SKPTP
Sbjct: 61  SSPTSTKPKNEVVKSEDKMKERSTNTDEXXXPRESSHYSDADSSSKPTP 109

[Close]
BLAST of Carg18696 vs. TrEMBL
Match: tr|A0A2C9UY50|A0A2C9UY50_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G157400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.2e-05
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0 

Query: 1  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
          MKG N   +RG HLSIA++ L FT+I LW W+K+ F + L   ++Q+    SE++V    
Sbjct: 1  MKGANNFRLRGRHLSIALLALTFTTIFLWAWEKNPFVTTLQSAQEQFSFHSSEFLVDSPE 60

Query: 61 SSSTP 66
           SS+P
Sbjct: 61 DSSSP 65

[Close]
BLAST of Carg18696 vs. TrEMBL
Match: tr|A0A2I4G563|A0A2I4G563_9ROSI (protein trichome birefringence-like 14 OS=Juglans regia OX=51240 GN=LOC109004809 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-04
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 1   MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN 60
           MKGGN   +RG +LS+ + VL+ T+I LW W+K+ F++ LP  ++ Y+IP SE+     N
Sbjct: 1   MKGGNNYRLRGRNLSLTLAVLIVTTIALWAWEKNPFSNTLPSAQEHYIIPSSEFHSDTRN 60

Query: 61  SSSTPKDEMVK-SENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPI 108
            S+   + M K  EN  +       + E+   G+   DA S   P  I
Sbjct: 61  ESAVSWNPMEKIGENSSQVIITAAAKGEEKTFGTTPVDAISAFTPEMI 108

[Close]
BLAST of Carg18696 vs. TrEMBL
Match: tr|A0A2K2ACH1|A0A2K2ACH1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G065100v3 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.8e-04
Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 4   GNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSS 63
           GN   ++G HLS+ ++VL FT+I LW W+K+ F + L   ++Q+    SE+VV     SS
Sbjct: 3   GNFCRLKGRHLSVTLLVLTFTTIFLWAWEKNPFVTTLRSAQEQFNFHTSEFVVDTPKGSS 62

Query: 64  TPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSIS 103
              D +  +E+ ++GR +N    E+       FDA + +
Sbjct: 63  F--DSLTPNEH-VQGRDSNPTRSEESQIPEKEFDASNFT 98

[Close]
BLAST of Carg18696 vs. TrEMBL
Match: tr|A0A2K2ACH5|A0A2K2ACH5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G065100v3 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.8e-04
Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 4   GNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSS 63
           GN   ++G HLS+ ++VL FT+I LW W+K+ F + L   ++Q+    SE+VV     SS
Sbjct: 3   GNFCRLKGRHLSVTLLVLTFTTIFLWAWEKNPFVTTLRSAQEQFNFHTSEFVVDTPKGSS 62

Query: 64  TPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSIS 103
              D +  +E+ ++GR +N    E+       FDA + +
Sbjct: 63  F--DSLTPNEH-VQGRDSNPTRSEESQIPEKEFDASNFT 98

The following BLAST results are available for this feature:
BLAST of Carg18696 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954312.19.4e-5193.91protein trichome birefringence-like 14 isoform X1 [Cucurbita moschata] >XP_02295... [more]
XP_023548323.14.7e-5093.04protein trichome birefringence-like 14 isoform X1 [Cucurbita pepo subsp. pepo] >... [more]
XP_022954314.12.8e-4791.30protein trichome birefringence-like 14 isoform X2 [Cucurbita moschata][more]
XP_022954315.16.3e-4798.06protein trichome birefringence-like 14 isoform X3 [Cucurbita moschata][more]
XP_023548325.11.4e-4690.43protein trichome birefringence-like 14 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg18696 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg18696 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg18696 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CEB0|A0A1S3CEB0_CUCME6.7e-2968.81protein trichome birefringence-like 14 OS=Cucumis melo OX=3656 GN=LOC103499895 P... [more]
tr|A0A2C9UY50|A0A2C9UY50_MANES5.2e-0543.08Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G157400 PE=4 SV=... [more]
tr|A0A2I4G563|A0A2I4G563_9ROSI7.5e-0435.19protein trichome birefringence-like 14 OS=Juglans regia OX=51240 GN=LOC109004809... [more]
tr|A0A2K2ACH1|A0A2K2ACH1_POPTR9.8e-0433.33Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G065100v3 PE=... [more]
tr|A0A2K2ACH5|A0A2K2ACH5_POPTR9.8e-0433.33Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G065100v3 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18696-RACarg18696-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..84

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18696CmoCh17G009080Cucurbita moschata (Rifu)carcmoB0480
Carg18696Cp4.1LG12g06950Cucurbita pepo (Zucchini)carcpeB0493
Carg18696Cla97C09G166110Watermelon (97103) v2carwmbB0371
Carg18696Bhi09G000499Wax gourdcarwgoB0439
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18696Carg13464Silver-seed gourdcarcarB379
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18696Silver-seed gourdcarcarB207
Carg18696Silver-seed gourdcarcarB288
Carg18696Silver-seed gourdcarcarB380
Carg18696Silver-seed gourdcarcarB381
Carg18696Silver-seed gourdcarcarB382
Carg18696Silver-seed gourdcarcarB383
Carg18696Cucumber (Gy14) v2carcgybB0365
Carg18696Cucumber (Gy14) v2carcgybB0366
Carg18696Cucumber (Gy14) v1carcgyB0413
Carg18696Cucurbita maxima (Rimu)carcmaB0496
Carg18696Cucurbita maxima (Rimu)carcmaB0497
Carg18696Cucurbita maxima (Rimu)carcmaB0498
Carg18696Cucurbita maxima (Rimu)carcmaB0499
Carg18696Cucurbita moschata (Rifu)carcmoB0479
Carg18696Cucurbita moschata (Rifu)carcmoB0481
Carg18696Cucurbita moschata (Rifu)carcmoB0482
Carg18696Cucurbita pepo (Zucchini)carcpeB0494
Carg18696Cucurbita pepo (Zucchini)carcpeB0495
Carg18696Wild cucumber (PI 183967)carcpiB0390
Carg18696Wild cucumber (PI 183967)carcpiB0391
Carg18696Cucumber (Chinese Long) v2carcuB0386
Carg18696Cucumber (Chinese Long) v2carcuB0387
Carg18696Cucumber (Chinese Long) v3carcucB0389
Carg18696Cucumber (Chinese Long) v3carcucB0390
Carg18696Bottle gourd (USVL1VR-Ls)carlsiB322
Carg18696Bottle gourd (USVL1VR-Ls)carlsiB321
Carg18696Melon (DHL92) v3.5.1carmeB0359
Carg18696Melon (DHL92) v3.5.1carmeB0360
Carg18696Melon (DHL92) v3.6.1carmedB0364
Carg18696Melon (DHL92) v3.6.1carmedB0365
Carg18696Watermelon (Charleston Gray)carwcgB0347
Carg18696Watermelon (Charleston Gray)carwcgB0346
Carg18696Watermelon (97103) v1carwmB0345
Carg18696Watermelon (97103) v1carwmB0346
Carg18696Watermelon (97103) v2carwmbB0369
Carg18696Wax gourdcarwgoB0437
Carg18696Wax gourdcarwgoB0438