Carg18684 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18684
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger A20 and AN1 domain-containing stress-associated protein 5
Location	Cucurbita_argyrosperma_scaffold_139 : 143021 .. 143311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

mRNA sequence

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

Coding sequence (CDS)

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

Protein sequence

MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMKFSGEKSPRSTTSLSPEKFRFVSESRRITTAADRFLR

Homology

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_022991927.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Cucurbita maxima])

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-33
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRITTAADR 93

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_022954077.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucurbita moschata])

HSP 1 Score: 145.6 bits (366), Expect = 8.7e-32
Identity = 77/93 (82.80%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT               K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT---TAAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSPSPEKFRFVSESRRITTAADR 90

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_023549199.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 76/93 (81.72%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT               K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT---TAAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRS+TS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSSTSCSPEKFRFVSESRRITTAADR 90

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_023004678.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucurbita maxima])

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-31
Identity = 75/93 (80.65%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA                K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAA----TAASATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFV+ESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVAESRRITTAADR 89

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_004135919.1 (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Cucumis sativus] >KGN45146.1 hypothetical protein Csa_7G428830 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 9.7e-31
Identity = 75/93 (80.65%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNP TNNMCQKCFNAT               K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPTTNNMCQKCFNAT-------TATASMAIK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRI TAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRIITAADR 86

[Close]

BLAST of Carg18684 vs. TAIR10
Match: AT3G12630.1 (A20/AN1-like zinc finger family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-14
Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETI-----TLCVNNCGLTGNPATNNMCQKCFNAT 45
          MAQRTEKEETEFKV ET+       C NNCG+T NPATNNMCQKCFNA+
Sbjct: 1  MAQRTEKEETEFKVLETLXXXXXXXCTNNCGVTANPATNNMCQKCFNAS 49

[Close]

BLAST of Carg18684 vs. TAIR10
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04
Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 0


Query: 8  EETEFKVPETITLCVNNCGLTGNPATNNMCQKCF 42
          EE   + PE+  LCVNNCG  G+ AT N+C  C+
Sbjct: 3  EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCY 36

[Close]

BLAST of Carg18684 vs. TAIR10
Match: AT2G36320.1 (A20/AN1-like zinc finger family protein)

HSP 1 Score: 40.8 bits (94), Expect = 5.5e-04
Identity = 17/34 (50.00%), Postives = 21/34 (61.76%), Query Frame = 0


Query: 8  EETEFKVPETITLCVNNCGLTGNPATNNMCQKCF 42
          EE   + PE   LCVNNCG  G+ AT N+C  C+
Sbjct: 3  EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCY 36

[Close]

BLAST of Carg18684 vs. Swiss-Prot
Match: sp|Q9LHJ8|SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-13
Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETI-----TLCVNNCGLTGNPATNNMCQKCFNAT 45
          MAQRTEKEETEFKV ET+       C NNCG+T NPATNNMCQKCFNA+
Sbjct: 1  MAQRTEKEETEFKVLETLXXXXXXXCTNNCGVTANPATNNMCQKCFNAS 49

[Close]

BLAST of Carg18684 vs. Swiss-Prot
Match: sp|Q84PD8|SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP11 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-07
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA 44
          MAQR +K  E TE + PE +TLC N+CG  GNPATNN+CQ CF A
Sbjct: 1  MAQREKKVEEPTELRAPE-MTLCANSCGFPGNPATNNLCQNCFLA 44

[Close]

BLAST of Carg18684 vs. Swiss-Prot
Match: sp|A2Z2J6|SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=SAP1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-07
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA 44
          MAQR +K  E TE + PE ITLC N+CG  GNPAT N+CQ CF A
Sbjct: 1  MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLA 44

[Close]

BLAST of Carg18684 vs. Swiss-Prot
Match: sp|A3C039|SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP1 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-07
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA 44
          MAQR +K  E TE + PE ITLC N+CG  GNPAT N+CQ CF A
Sbjct: 1  MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLA 44

[Close]

BLAST of Carg18684 vs. Swiss-Prot
Match: sp|Q7Y1W9|SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 1  MAQRTEKEETEFKV--PETITLCVNNCGLTGNPATNNMCQKCF 42
          MAQ + K E+E  V  PE   LCVNNCG  G+  TNNMC KC+
Sbjct: 1  MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCY 43

[Close]

BLAST of Carg18684 vs. TrEMBL
Match: tr|A0A0A0KBH5|A0A0A0KBH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428830 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.4e-31
Identity = 75/93 (80.65%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNP TNNMCQKCFNAT               K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPTTNNMCQKCFNAT-------TATASMAIK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRI TAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRIITAADR 86

[Close]

BLAST of Carg18684 vs. TrEMBL
Match: tr|A0A1S3CEC2|A0A1S3CEC2_CUCME (zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Cucumis melo OX=3656 GN=LOC103499909 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 75/93 (80.65%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATXXXXXXXXXXXXXXXK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT               K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT-------TTTASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRST S SPEKFRFVSESRRI TAADR
Sbjct: 61 FSGEKSPRSTISRSPEKFRFVSESRRIITAADR 86

[Close]

BLAST of Carg18684 vs. TrEMBL
Match: tr|A0A2P5AX56|A0A2P5AX56_PARAD (Zinc finger transcription factor OS=Parasponia andersonii OX=3476 GN=PanZnF18 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-18
Identity = 73/96 (76.04%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA-TXXXXXXXXXXXXXXX 60
          MAQRTEKEETEFKVPETITLCVNNCG+ GNPATNNMCQKCF+A T XXXXXXXXXXXXX 
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGVIGNPATNNMCQKCFSATTSXXXXXXXXXXXXXL 60

Query: 61 KFSGEKSPRS-TTSLSPEKF----RFVSESRRITTA 91
          KFSGEKSP S  TSLS E+         E+ R TTA
Sbjct: 61 KFSGEKSPISAATSLSSERSDGYNTLAPENSRKTTA 96

[Close]

BLAST of Carg18684 vs. TrEMBL
Match: tr|A0A2P6S787|A0A2P6S787_ROSCH (Putative transcription regulator A20-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0314971 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.8e-18
Identity = 69/93 (74.19%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAT--XXXXXXXXXXXXXX 60
          MAQRTEKEETEFKVP+T+T CVNNCG+TGNPATNNMCQKCFNAT  XXXXXXXXXXXXX 
Sbjct: 1  MAQRTEKEETEFKVPDTLTHCVNNCGVTGNPATNNMCQKCFNATTXXXXXXXXXXXXXXV 60

Query: 61 XKFSGEKSPRSTTSLSPEKFRFVSESRRITTAA 92
           KFSGEK PRS++      FRF   S  I  AA
Sbjct: 61 FKFSGEKVPRSSS------FRFDGPSETIRKAA 87

[Close]

BLAST of Carg18684 vs. TrEMBL
Match: tr|A0A2P5E717|A0A2P5E717_9ROSA (Zinc finger transcription factor OS=Trema orientalis OX=63057 GN=TorZnF18 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-18
Identity = 72/96 (75.00%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA-TXXXXXXXXXXXXXXX 60
          MAQRTEKEETEFKVPETITLCVNNCG+ GNPATNNMCQKCF+A T XXXXXXXXXXXXX 
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGVIGNPATNNMCQKCFSATTSXXXXXXXXXXXXXL 60

Query: 61 KFSGEKSPRS-TTSLSPEKFRFVS----ESRRITTA 91
          KFSG+KSP S  TSLS E+    +    E+ R TTA
Sbjct: 61 KFSGDKSPISAATSLSSERSDVYNTPAPENSRKTTA 96

The following BLAST results are available for this feature:

BLAST of Carg18684 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991927.1	3.6e-33	98.92	zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Cucurbita...	[more]
XP_022954077.1	8.7e-32	82.80	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucu...	[more]
XP_023549199.1	1.5e-31	81.72	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucu...	[more]
XP_023004678.1	5.7e-31	80.65	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucu...	[more]
XP_004135919.1	9.7e-31	80.65	PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5...	[more]

BLAST of Carg18684 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12630.1	2.6e-14	73.47	A20/AN1-like zinc finger family protein	[more]
AT3G52800.1	1.9e-04	50.00	A20/AN1-like zinc finger family protein	[more]
AT2G36320.1	5.5e-04	50.00	A20/AN1-like zinc finger family protein	[more]

BLAST of Carg18684 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LHJ8\|SAP5_ARATH	4.7e-13	73.47	Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabido...	[more]
sp\|Q84PD8\|SAP11_ORYSJ	1.3e-07	62.22	Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza ...	[more]
sp\|A2Z2J6\|SAP1_ORYSI	3.0e-07	62.22	Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza s...	[more]
sp\|A3C039\|SAP1_ORYSJ	3.0e-07	62.22	Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza s...	[more]
sp\|Q7Y1W9\|SAP9_ORYSJ	3.6e-05	55.81	Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza s...	[more]

BLAST of Carg18684 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBH5\|A0A0A0KBH5_CUCSA	6.4e-31	80.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428830 PE=4 SV=1	[more]
tr\|A0A1S3CEC2\|A0A1S3CEC2_CUCME	1.1e-30	80.65	zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Cucumis...	[more]
tr\|A0A2P5AX56\|A0A2P5AX56_PARAD	2.8e-18	76.04	Zinc finger transcription factor OS=Parasponia andersonii OX=3476 GN=PanZnF18 PE...	[more]
tr\|A0A2P6S787\|A0A2P6S787_ROSCH	4.8e-18	74.19	Putative transcription regulator A20-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A2P5E717\|A0A2P5E717_9ROSA	8.1e-18	75.00	Zinc finger transcription factor OS=Trema orientalis OX=63057 GN=TorZnF18 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002653	Znf_A20

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18684-RA	Carg18684-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002653	Zinc finger, A20-type	SMART	SM00259	A20_3	coord: 18..42 e-value: 2.8E-5 score: 33.5
IPR002653	Zinc finger, A20-type	PFAM	PF01754	zf-A20	coord: 20..42 e-value: 3.5E-10 score: 39.5
IPR002653	Zinc finger, A20-type	PROSITE	PS51036	ZF_A20	coord: 15..49 score: 8.847
None	No IPR available	PANTHER	PTHR10634:SF22	ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5	coord: 1..76
None	No IPR available	PANTHER	PTHR10634	AN1-TYPE ZINC FINGER PROTEIN	coord: 1..76
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 20..60

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18684	Cla015227	Watermelon (97103) v1	carwmB0344
Carg18684	Csa7G428830	Cucumber (Chinese Long) v2	carcuB0387
Carg18684	MELO3C023536	Melon (DHL92) v3.5.1	carmeB0359
Carg18684	CSPI07G19390	Wild cucumber (PI 183967)	carcpiB0391
Carg18684	CmaCh08G005380	Cucurbita maxima (Rimu)	carcmaB0499
Carg18684	CmoCh08G005300	Cucurbita moschata (Rifu)	carcmoB0482
Carg18684	Lsi02G025890	Bottle gourd (USVL1VR-Ls)	carlsiB321
Carg18684	CsGy7G017720	Cucumber (Gy14) v2	carcgybB0366
Carg18684	MELO3C023536.2	Melon (DHL92) v3.6.1	carmedB0364
Carg18684	CsaV3_7G031220	Cucumber (Chinese Long) v3	carcucB0390
Carg18684	Cla97C10G195270	Watermelon (97103) v2	carwmbB0369
Carg18684	Cla97C09G166600	Watermelon (97103) v2	carwmbB0370
Carg18684	Bhi11G001190	Wax gourd	carwgoB0437
Carg18684	Bhi09G000517	Wax gourd	carwgoB0439

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18684	Bottle gourd (USVL1VR-Ls)	carlsiB322
Carg18684	Melon (DHL92) v3.5.1	carmeB0360
Carg18684	Melon (DHL92) v3.6.1	carmedB0365
Carg18684	Watermelon (Charleston Gray)	carwcgB0347
Carg18684	Watermelon (Charleston Gray)	carwcgB0345
Carg18684	Watermelon (Charleston Gray)	carwcgB0346
Carg18684	Watermelon (97103) v1	carwmB0345
Carg18684	Watermelon (97103) v1	carwmB0346
Carg18684	Watermelon (97103) v2	carwmbB0371
Carg18684	Wax gourd	carwgoB0438
Carg18684	Silver-seed gourd	carcarB207
Carg18684	Silver-seed gourd	carcarB288
Carg18684	Silver-seed gourd	carcarB379
Carg18684	Silver-seed gourd	carcarB380
Carg18684	Silver-seed gourd	carcarB381
Carg18684	Silver-seed gourd	carcarB382
Carg18684	Silver-seed gourd	carcarB383
Carg18684	Cucumber (Gy14) v2	carcgybB0365
Carg18684	Cucumber (Gy14) v1	carcgyB0413
Carg18684	Cucurbita maxima (Rimu)	carcmaB0496
Carg18684	Cucurbita maxima (Rimu)	carcmaB0497
Carg18684	Cucurbita maxima (Rimu)	carcmaB0498
Carg18684	Cucurbita moschata (Rifu)	carcmoB0479
Carg18684	Cucurbita moschata (Rifu)	carcmoB0480
Carg18684	Cucurbita moschata (Rifu)	carcmoB0481
Carg18684	Cucurbita pepo (Zucchini)	carcpeB0493
Carg18684	Cucurbita pepo (Zucchini)	carcpeB0494
Carg18684	Cucurbita pepo (Zucchini)	carcpeB0495
Carg18684	Wild cucumber (PI 183967)	carcpiB0390
Carg18684	Cucumber (Chinese Long) v2	carcuB0386
Carg18684	Cucumber (Chinese Long) v3	carcucB0389