Carg18674 (gene) Silver-seed gourd

Overview
NameCarg18674
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMYB transcription factor
LocationCucurbita_argyrosperma_scaffold_139 : 104076 .. 104961 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAGTTAAAATGTAGGCCATAGTTGTGGTTAATAGGTTTAGTATCATCGAGTCCAAAATAATTAATACAATCCATTCTTCACTTGATTCATTCATCTGATCAATTATTATTTGTTGGGTACCGTTTTTATTGGTTAAAATTTTCGATTTGACCTAATAAACGCATATCGTCAAATATTTAATTAAATCAAATTTTGATATTAATTAGGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA

mRNA sequence

ATGAACAAAGTTAAAATGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA

Coding sequence (CDS)

ATGAACAAAGTTAAAATGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA

Protein sequence

MNKVKMWSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIPTHEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEEFNNDCFDYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD
Homology
[Close]
BLAST of Carg18674 vs. NCBI nr
Match: XP_022953992.1 (transcription factor MYB83 [Cucurbita moschata])

HSP 1 Score: 452.6 bits (1163), Expect = 8.0e-124
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP
Sbjct: 90  WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 149

Query: 67  THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEG 126
           THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEG
Sbjct: 150 THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEG 209

Query: 127 YYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEEFNNDCF 186
           YYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEE NNDCF
Sbjct: 210 YYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEELNNDCF 269

Query: 187 DYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD 230
           DYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD
Sbjct: 270 DYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD 312

[Close]
BLAST of Carg18674 vs. NCBI nr
Match: XP_023549385.1 (transcription factor MYB83 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 1.2e-111
Identity = 204/223 (91.48%), Postives = 212/223 (95.07%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP
Sbjct: 92  WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 151

Query: 67  THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEG 126
           THE  HNN+MNMFM+SSSFS STS STPS+FLQNYIPCDPFPTLLDN  YN VGGAMEEG
Sbjct: 152 THE--HNNIMNMFMESSSFSSSTSKSTPSLFLQNYIPCDPFPTLLDNHQYNRVGGAMEEG 211

Query: 127 YYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEEFNNDCF 186
           YYGDYSRTIFEPRGLVRDNYDFSHLPPL NGDIIEEIKVPSINIKENN+NNI+EFNND F
Sbjct: 212 YYGDYSRTIFEPRGLVRDNYDFSHLPPLGNGDIIEEIKVPSINIKENNENNIQEFNNDYF 271

Query: 187 DYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD 230
           DYNN+M+FKAEGIFGNNYQ ELQ+N KIGGWDLDGFILDFQMD
Sbjct: 272 DYNNQMNFKAEGIFGNNYQAELQDNLKIGGWDLDGFILDFQMD 312

[Close]
BLAST of Carg18674 vs. NCBI nr
Match: XP_022991916.1 (transcription factor MYB83-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 367.9 bits (943), Expect = 2.6e-98
Identity = 189/228 (82.89%), Postives = 199/228 (87.28%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKNLWNSSLKKRLK+H+NISSPNP ESSE RSSN+FGELTENIIP
Sbjct: 91  WSQIAARLPGRTDNEIKNLWNSSLKKRLKSHNNISSPNPRESSEPRSSNNFGELTENIIP 150

Query: 67  THEHKHNNVMNMFMKS---SSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAM 126
            HE  HNN+MNM M+S              PSMFLQNYIPCDPF TLLDND Y MVGGAM
Sbjct: 151 IHE--HNNIMNMCMESXXXXXXXXXXXXXXPSMFLQNYIPCDPFRTLLDNDQYIMVGGAM 210

Query: 127 EEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEEFNN 186
           EEGYYGDYS+ IFEP+GLVRDNYDFSHLPPL NGDIIEEIKVPSINIKEN +NNIEEFNN
Sbjct: 211 EEGYYGDYSQRIFEPKGLVRDNYDFSHLPPLGNGDIIEEIKVPSINIKENIENNIEEFNN 270

Query: 187 DCFDYNNEMSFKAEGIFGNNYQTELQE--NSKIGGWDLDGFILDFQMD 230
           DCFDYNNEMSFK EGIFGNNYQTELQE  NSKIGGWDL+GFILDFQ+D
Sbjct: 271 DCFDYNNEMSFKVEGIFGNNYQTELQENSNSKIGGWDLEGFILDFQID 316

[Close]
BLAST of Carg18674 vs. NCBI nr
Match: XP_022991917.1 (transcription factor MYB83-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 2.1e-63
Identity = 130/162 (80.25%), Postives = 137/162 (84.57%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKNLWNSSLKKRLK+H+NISSPNP ESSE RSSN+FGELTENIIP
Sbjct: 91  WSQIAARLPGRTDNEIKNLWNSSLKKRLKSHNNISSPNPRESSEPRSSNNFGELTENIIP 150

Query: 67  THEHKHNNVMNMFMKS---SSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAM 126
            HE  HNN+MNM M+S              PSMFLQNYIPCDPF TLLDND Y MVGGAM
Sbjct: 151 IHE--HNNIMNMCMESXXXXXXXXXXXXXXPSMFLQNYIPCDPFRTLLDNDQYIMVGGAM 210

Query: 127 EEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKV 166
           EEGYYGDYS+ IFEP+GLVRDNYDFSHLPPL NGDIIEEIKV
Sbjct: 211 EEGYYGDYSQRIFEPKGLVRDNYDFSHLPPLGNGDIIEEIKV 250

[Close]
BLAST of Carg18674 vs. NCBI nr
Match: XP_022151936.1 (transcription factor MYB83-like [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 5.6e-61
Identity = 149/235 (63.40%), Postives = 170/235 (72.34%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKN WNS+LKKRLKN SN SSPNPSES E R+  SFGE+ ENIIP
Sbjct: 88  WSQIAARLPGRTDNEIKNFWNSTLKKRLKNRSN-SSPNPSESHEPRNC-SFGEIIENIIP 147

Query: 67  THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQ-NYIPCDPFPTLLDNDGYNMVGGAMEE 126
            HEH  N + +  M +SSF    SM  P++F++ NYIP DPFP LLD     MVGG  EE
Sbjct: 148 MHEH-DNIINDTCMDNSSFPSLASM-PPTLFVENNYIPYDPFPLLLD-----MVGGTTEE 207

Query: 127 GYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIK---ENNQNNIEEFN 186
           GY  DY R + EP+  VRD  DFS+LPPL NGD IEEIKVPSI+IK   EN+ NN + FN
Sbjct: 208 GYCVDYKR-VLEPKE-VRDLCDFSYLPPLGNGD-IEEIKVPSIDIKENIENSNNNSDRFN 267

Query: 187 NDCFDYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGF--------ILDFQMD 230
           N CF Y NEM+FK E IFGNN Q++LQEN K GGWDL+GF        ILDF+MD
Sbjct: 268 NCCFSYTNEMNFKVEDIFGNNCQSQLQENLKTGGWDLEGFIQDLSCFPILDFKMD 310

[Close]
BLAST of Carg18674 vs. TAIR10
Match: AT3G08500.1 (myb domain protein 83)

HSP 1 Score: 68.2 bits (165), Expect = 7.7e-12
Identity = 75/248 (30.24%), Postives = 103/248 (41.53%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESS-------ELRSSN-SFG 66
           WSQIA RLPGRTDNEIKN WNS+LKK                        + R  +   G
Sbjct: 107 WSQIATRLPGRTDNEIKNFWNSTLKKXXXXXXXXXXXXXXXXXXXXXXXLDPRDQHVDMG 166

Query: 67  ELTENIIPTHEHKHN--NVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGY 126
             + +++  + H  N   V N     SS   +      S+ L      DP    + ++GY
Sbjct: 167 GNSTSLMDDYHHDENMMTVGNTMRMDSSSPFNVGPMVNSVGLNQLY--DPLMISVPDNGY 226

Query: 127 NMVGGAM---EEGYYGDYSRTIFEP-RGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKE 186
           + +G  +        GDY  TI +P    V    D   +PP  N ++I            
Sbjct: 227 HQMGNTVNVFSVNGLGDYGNTILDPISKRVSVEGDDWFIPPSENTNVIA--------CST 286

Query: 187 NNQNNIEEFNNDCFDYNN---EMSFKAEGIFGNNYQTELQENSKIGGWDLDGFI------ 230
           +N  N++   + CF+  N     SFK   + G    +   EN KIG WDLDG I      
Sbjct: 287 SNNLNLQAL-DPCFNSKNLCHSESFKVGNVLGIENGSWEIENPKIGDWDLDGLIDNNSSF 343

[Close]
BLAST of Carg18674 vs. TAIR10
Match: AT5G12870.1 (myb domain protein 46)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNIS 42
           WSQIAARLPGRTDNEIKN WNS++KKRLK  S+ S
Sbjct: 95  WSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTS 129

[Close]
BLAST of Carg18674 vs. TAIR10
Match: AT4G01680.2 (myb domain protein 55)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLK 36
           WSQIAA+LPGRTDNEIKNLWNS LKK+L+
Sbjct: 101 WSQIAAQLPGRTDNEIKNLWNSCLKKKLR 129

[Close]
BLAST of Carg18674 vs. TAIR10
Match: AT1G09540.1 (myb domain protein 61)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLK-------NHSNIS-------SPNPSESSELR 66
           WSQIA+RLPGRTDNEIKNLWNSS+KK+LK        H  IS          P+ S+  R
Sbjct: 89  WSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPNTHKPISEVESFSDKDKPTTSNNKR 148

Query: 67  SSNSFGELTENIIPTHE---HKHNNVMNMF-MKSSSFSCSTSMS-TPSMFLQNYIPCDPF 126
           S N     + +     +    + +++ + F  +  +F+ +  +S T    L + IP    
Sbjct: 149 SGNDHKSPSSSSATNQDFFLERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLCSMIPPQFS 208

Query: 127 PTLLDNDGYNMVGGAMEEGYYGDYSRTIFEPR-GLVRDNYDFSHLPPLANGDIIEEIKVP 186
           P        NMVG  ++       +    +P   L  DN   S   P++ GD + ++  P
Sbjct: 209 PG-------NMVGSVLQ-------TPVCVKPSISLPPDNNSSS---PISGGDHV-KLAAP 268

Query: 187 SINIKENNQNNIEEFNNDCFDYN 190
           +   + NN N    F+N  F ++
Sbjct: 269 NWEFQTNNNNTSNFFDNGGFSWS 273

[Close]
BLAST of Carg18674 vs. TAIR10
Match: AT1G16490.1 (myb domain protein 58)

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTEN 64
           WS+IA++LPGRTDNEIKN+W++ LKKRL + +N+++        L    +  E + N
Sbjct: 91  WSKIASKLPGRTDNEIKNVWHTHLKKRLSSETNLNADEAGSKGSLNEEENSQESSPN 147

[Close]
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9C6U1|MYB83_ARATH (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 75/248 (30.24%), Postives = 103/248 (41.53%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESS-------ELRSSN-SFG 66
           WSQIA RLPGRTDNEIKN WNS+LKK                        + R  +   G
Sbjct: 107 WSQIATRLPGRTDNEIKNFWNSTLKKXXXXXXXXXXXXXXXXXXXXXXXLDPRDQHVDMG 166

Query: 67  ELTENIIPTHEHKHN--NVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGY 126
             + +++  + H  N   V N     SS   +      S+ L      DP    + ++GY
Sbjct: 167 GNSTSLMDDYHHDENMMTVGNTMRMDSSSPFNVGPMVNSVGLNQLY--DPLMISVPDNGY 226

Query: 127 NMVGGAM---EEGYYGDYSRTIFEP-RGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKE 186
           + +G  +        GDY  TI +P    V    D   +PP  N ++I            
Sbjct: 227 HQMGNTVNVFSVNGLGDYGNTILDPISKRVSVEGDDWFIPPSENTNVIA--------CST 286

Query: 187 NNQNNIEEFNNDCFDYNN---EMSFKAEGIFGNNYQTELQENSKIGGWDLDGFI------ 230
           +N  N++   + CF+  N     SFK   + G    +   EN KIG WDLDG I      
Sbjct: 287 SNNLNLQAL-DPCFNSKNLCHSESFKVGNVLGIENGSWEIENPKIGDWDLDGLIDNNSSF 343

[Close]
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9LXV2|MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNIS 42
           WSQIAARLPGRTDNEIKN WNS++KKRLK  S+ S
Sbjct: 95  WSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTS 129

[Close]
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q8VZQ2|MYB61_ARATH (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLK-------NHSNIS-------SPNPSESSELR 66
           WSQIA+RLPGRTDNEIKNLWNSS+KK+LK        H  IS          P+ S+  R
Sbjct: 89  WSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPNTHKPISEVESFSDKDKPTTSNNKR 148

Query: 67  SSNSFGELTENIIPTHE---HKHNNVMNMF-MKSSSFSCSTSMS-TPSMFLQNYIPCDPF 126
           S N     + +     +    + +++ + F  +  +F+ +  +S T    L + IP    
Sbjct: 149 SGNDHKSPSSSSATNQDFFLERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLCSMIPPQFS 208

Query: 127 PTLLDNDGYNMVGGAMEEGYYGDYSRTIFEPR-GLVRDNYDFSHLPPLANGDIIEEIKVP 186
           P        NMVG  ++       +    +P   L  DN   S   P++ GD + ++  P
Sbjct: 209 PG-------NMVGSVLQ-------TPVCVKPSISLPPDNNSSS---PISGGDHV-KLAAP 268

Query: 187 SINIKENNQNNIEEFNNDCFDYN 190
           +   + NN N    F+N  F ++
Sbjct: 269 NWEFQTNNNNTSNFFDNGGFSWS 273

[Close]
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|P20027|MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLK 36
           WSQIA+ LPGRTDNEIKN WNS +KK+L+
Sbjct: 91  WSQIASHLPGRTDNEIKNFWNSCIKKKLR 119

[Close]
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9SA47|MYB58_ARATH (Transcription factor MYB58 OS=Arabidopsis thaliana OX=3702 GN=MYB58 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTEN 64
           WS+IA++LPGRTDNEIKN+W++ LKKRL + +N+++        L    +  E + N
Sbjct: 91  WSKIASKLPGRTDNEIKNVWHTHLKKRLSSETNLNADEAGSKGSLNEEENSQESSPN 147

[Close]
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A1S3CED2|A0A1S3CED2_CUCME (transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103499922 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.9e-31
Identity = 109/235 (46.38%), Postives = 125/235 (53.19%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSN---ISSPNPSESSEL--RSSNSFGELT 66
           WSQIAARLPGRTDNEIKN WNS+LKKR+KN+ N   I SPN S SSEL   SSNSFGE  
Sbjct: 93  WSQIAARLPGRTDNEIKNFWNSTLKKRMKNNRNYNIIPSPNLSHSSELPRSSSNSFGE-- 152

Query: 67  ENIIPTHEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGG 126
                                      +    P +F                        
Sbjct: 153 --------------------------QSXXXKPLLFSTXXXXXXXXXXXXXXXXXXXXXX 212

Query: 127 AMEEGYYGDY-SRTIFEPRGLVRDNYDFSHLPPLANGD-IIEEI-KVPSINIKENNQNNI 186
             EEGY+GDY + TI EP+  VRD YD SHL  L N D IIEEI KVPS+N     QNN 
Sbjct: 213 ITEEGYFGDYTTTTIVEPKDFVRDFYDLSHLHQLENKDIIIEEINKVPSMN-NNPQQNNY 272

Query: 187 EEFNNDCFDYNNEMSFKAEGIFGNN---YQTELQENSKIG-GWDLDGFILDFQMD 230
           E FNN      ++MSF+ E IFGNN      +LQ++ KIG  WD D FILDFQ+D
Sbjct: 273 ELFNN-----IDQMSFEVEDIFGNNNNCQNNQLQDHFKIGANWDFDPFILDFQID 293

[Close]
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A061E379|A0A061E379_THECC (Myb domain protein 83 OS=Theobroma cacao OX=3641 GN=TCM_005885 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.2e-28
Identity = 109/249 (43.78%), Postives = 137/249 (55.02%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNH-SNISSPNPSESSELRSSNSFGELTENII 66
           WSQIAARLPGRTDNEIKN WNS++KKRLKN+ S  SSPN S+SSELR     G     I 
Sbjct: 97  WSQIAARLPGRTDNEIKNFWNSTIKKRLKNNTSTSSSPNNSDSSELRDHGVGG-----IF 156

Query: 67  PTHEHKHNNVMNMFMKSSSFSCSTSMS---TPSMFLQNYIPCDPFPTLLDNDGYNMVG-- 126
           P HEH   ++M + M SSS S STSM    T + F       DPFP L  N+ Y+M G  
Sbjct: 157 PVHEH---DIMTLCMDSSS-SSSTSMQPIVTGNQF-------DPFPLL--NNRYDMTGAP 216

Query: 127 -----------GAMEEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKV-PSI 186
                      G M +G+YGDY   + EP   +    DFS LPPL +  I E      SI
Sbjct: 217 CLFDVPACLTQGDMVQGFYGDYG--VLEPANKIGLEGDFS-LPPLESRSIEENNAANGSI 276

Query: 187 NIKENNQNNIEEFNNDCFDYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFI----- 230
           ++K NN +    +NN CF+ N + SFK   +FG        EN ++G WDL+G +     
Sbjct: 277 DMKSNNNH----YNNTCFN-NTDQSFKVGDMFGLENHHWQGENLRMGEWDLEGLMDNISS 319

[Close]
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A2N9FKZ2|A0A2N9FKZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15750 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.6e-26
Identity = 103/239 (43.10%), Postives = 133/239 (55.65%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNI-SSPNPSESSELRSSNSFGELTENII 66
           WSQIAARLPGRTDNEIKN WNS+LKKR KN++ I +SPN S+SSE R      ++   + 
Sbjct: 97  WSQIAARLPGRTDNEIKNFWNSTLKKRFKNNTFITTSPNDSDSSEPR------DVIGGVT 156

Query: 67  PTHEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIP---CDPFPTLLDNDGYNMVGGA 126
           P HEH   ++MNM + + S S + SM       QN +P    DPFP +LDN  Y+M G A
Sbjct: 157 PLHEH---DLMNMCLDTFSSSSNYSM-------QNLVPGSHLDPFP-MLDN-CYDMTGAA 216

Query: 127 --------------MEEGYYGDYSRTIFEPR--GLVRDNYDFSHLPPLANGDIIEEIKVP 186
                           + +YGDY   IFEP   GL RD      LPPL +  I E   + 
Sbjct: 217 GIFNVPTSLAAQVGKGDEFYGDYG--IFEPNNMGLERD----LSLPPLESRSIEENNAM- 276

Query: 187 SINIKENNQNNIEEFNNDCFDYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILD 226
            +++K NN +    FNNDCF+ N +  FK E +FG     +  EN KIG WD +G + D
Sbjct: 277 -VDMKSNNNH----FNNDCFN-NTDQGFKVENMFGCGNHGQ-GENLKIGEWDFEGLMQD 303

[Close]
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A151RZW4|A0A151RZW4_CAJCA (Transcription factor MYB46 OS=Cajanus cajan OX=3821 GN=KK1_030281 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 8.4e-21
Identity = 96/242 (39.67%), Postives = 127/242 (52.48%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIP 66
           WSQIAARLPGRTDNEIKN WNS+LKKRLK +++ SSPN S+SSE R     G +  N   
Sbjct: 100 WSQIAARLPGRTDNEIKNFWNSTLKKRLKINNSTSSPNNSDSSEPRDHVMAGIMPMN--- 159

Query: 67  THEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGA---- 126
            +EH   ++M M M SSS     SM   +M L +    DPFP L  ++ Y+M G A    
Sbjct: 160 -NEH---DLMTMCMDSSSXXXXXSMHANNMVLPDQF--DPFPLL--SNRYDMTGAAGYLD 219

Query: 127 --------------MEEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSI 186
                           +G +G Y  T+ EP     +N DFS LPPL +  I +      I
Sbjct: 220 NMASACLTQVGMTHDHDGVHGGYYGTMLEPNKTGLEN-DFS-LPPLESTSIEDNSNSTPI 279

Query: 187 NIKENNQN---NIEEFNNDCFDYNNEMSFKAEGIFG--NNYQTELQENSKIGGWDLDGFI 226
           ++K +N +   NI  FNN     NN +    E +FG  N+ Q    EN ++G WD +G +
Sbjct: 280 DVKSHNNHQFKNISCFNNTIQSPNNVV---VEDLFGFANHGQ---GENFRMGEWDFEGLM 322

[Close]
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A2I4FS05|A0A2I4FS05_9ROSI (transcription factor MYB46-like OS=Juglans regia OX=51240 GN=LOC109001541 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.2e-20
Identity = 100/239 (41.84%), Postives = 127/239 (53.14%), Query Frame = 0 

Query: 7   WSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNIS--SPNPSESSELRSSNSFGELTENI 66
           WSQIAARLPGRTDNEIKN WNS+LKKRL+N +NIS  SPN S++SE R   S G +   +
Sbjct: 98  WSQIAARLPGRTDNEIKNFWNSTLKKRLRN-NNISTPSPNDSDASEPRDVISGGVMAPIL 157

Query: 67  IPTHEHKHNNVMNMFMK--SSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVG-- 126
              HEH   ++MNM M+  SSS  C  ++ T S         DPF +++DN  Y+M+G  
Sbjct: 158 ---HEH---DIMNMCMETFSSSSICMNTLVTSSQ------QFDPF-SMIDN-RYDMIGAA 217

Query: 127 ------------GAMEEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSI 186
                       G      YG     I EP   +    D S LPPL +   IEE    + 
Sbjct: 218 GLFNMPTNLAQFGTGNGQLYGSDYHGILEPNSTMGLERDLS-LPPLESRSSIEE---NNA 277

Query: 187 NIKENNQNNIEEFNNDCFDYNNEMSFKAEGI--FGNNYQTELQENSKIGGWDLDGFILD 226
            + E + NN   FNN CF  N   SFK E +  FGN+ Q    EN K+G WD +G + D
Sbjct: 278 EVDEKSSNN--HFNNGCF--NITESFKIENMCGFGNHGQ---GENLKMGEWDFEGLMQD 310

The following BLAST results are available for this feature:
BLAST of Carg18674 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953992.18.0e-12499.55transcription factor MYB83 [Cucurbita moschata][more]
XP_023549385.11.2e-11191.48transcription factor MYB83 [Cucurbita pepo subsp. pepo][more]
XP_022991916.12.6e-9882.89transcription factor MYB83-like isoform X1 [Cucurbita maxima][more]
XP_022991917.12.1e-6380.25transcription factor MYB83-like isoform X2 [Cucurbita maxima][more]
XP_022151936.15.6e-6163.40transcription factor MYB83-like [Momordica charantia][more]
BLAST of Carg18674 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08500.17.7e-1230.24myb domain protein 83[more]
AT5G12870.12.7e-0980.00myb domain protein 46[more]
AT4G01680.21.8e-0886.21myb domain protein 55[more]
AT1G09540.11.1e-0730.05myb domain protein 61[more]
AT1G16490.12.6e-0743.86myb domain protein 58[more]
BLAST of Carg18674 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C6U1|MYB83_ARATH1.4e-1030.24Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1[more]
sp|Q9LXV2|MYB46_ARATH4.9e-0880.00Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1[more]
sp|Q8VZQ2|MYB61_ARATH2.1e-0630.05Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1[more]
sp|P20027|MYB3_HORVU4.6e-0675.86Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3[more]
sp|Q9SA47|MYB58_ARATH4.6e-0643.86Transcription factor MYB58 OS=Arabidopsis thaliana OX=3702 GN=MYB58 PE=2 SV=1[more]
BLAST of Carg18674 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CED2|A0A1S3CED2_CUCME6.9e-3146.38transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103499922 PE=4 SV=1[more]
tr|A0A061E379|A0A061E379_THECC3.2e-2843.78Myb domain protein 83 OS=Theobroma cacao OX=3641 GN=TCM_005885 PE=4 SV=1[more]
tr|A0A2N9FKZ2|A0A2N9FKZ2_FAGSY6.6e-2643.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15750 PE=4 SV=1[more]
tr|A0A151RZW4|A0A151RZW4_CAJCA8.4e-2139.67Transcription factor MYB46 OS=Cajanus cajan OX=3821 GN=KK1_030281 PE=4 SV=1[more]
tr|A0A2I4FS05|A0A2I4FS05_9ROSI3.2e-2041.84transcription factor MYB46-like OS=Juglans regia OX=51240 GN=LOC109001541 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
IPR017930Myb_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18674-RACarg18674-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..191
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 2..56
e-value: 5.3E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..56
NoneNo IPR availablePANTHERPTHR10641:SF915SUBFAMILY NOT NAMEDcoord: 7..121
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 7..121
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..34
score: 13.76
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 7..30
e-value: 7.36869E-4
score: 35.2438
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 5..37

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18674Csa7G428180Cucumber (Chinese Long) v2carcuB0387
Carg18674ClCG09G004180Watermelon (Charleston Gray)carwcgB0345
Carg18674CmaCh17G009530Cucurbita maxima (Rimu)carcmaB0497
Carg18674CmoCh17G009280Cucurbita moschata (Rifu)carcmoB0480
Carg18674Lsi02G025770Bottle gourd (USVL1VR-Ls)carlsiB321
Carg18674Cp4.1LG12g06820Cucurbita pepo (Zucchini)carcpeB0493
Carg18674Cla97C09G166450Watermelon (97103) v2carwmbB0370
Carg18674Bhi09G000529Wax gourdcarwgoB0439
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18674Carg06907Silver-seed gourdcarcarB381
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18674Wax gourdcarwgoB0437
Carg18674Wax gourdcarwgoB0438
Carg18674Silver-seed gourdcarcarB207
Carg18674Silver-seed gourdcarcarB288
Carg18674Silver-seed gourdcarcarB379
Carg18674Silver-seed gourdcarcarB380
Carg18674Silver-seed gourdcarcarB382
Carg18674Cucumber (Gy14) v2carcgybB0365
Carg18674Cucumber (Gy14) v2carcgybB0366
Carg18674Cucumber (Gy14) v1carcgyB0415
Carg18674Cucurbita maxima (Rimu)carcmaB0496
Carg18674Cucurbita maxima (Rimu)carcmaB0498
Carg18674Cucurbita maxima (Rimu)carcmaB0499
Carg18674Cucurbita moschata (Rifu)carcmoB0479
Carg18674Cucurbita moschata (Rifu)carcmoB0481
Carg18674Cucurbita moschata (Rifu)carcmoB0482
Carg18674Cucurbita pepo (Zucchini)carcpeB0494
Carg18674Cucurbita pepo (Zucchini)carcpeB0495
Carg18674Wild cucumber (PI 183967)carcpiB0390
Carg18674Wild cucumber (PI 183967)carcpiB0391
Carg18674Cucumber (Chinese Long) v2carcuB0386
Carg18674Cucumber (Chinese Long) v3carcucB0389
Carg18674Cucumber (Chinese Long) v3carcucB0390
Carg18674Bottle gourd (USVL1VR-Ls)carlsiB322
Carg18674Melon (DHL92) v3.5.1carmeB0359
Carg18674Melon (DHL92) v3.5.1carmeB0360
Carg18674Melon (DHL92) v3.6.1carmedB0364
Carg18674Melon (DHL92) v3.6.1carmedB0365
Carg18674Watermelon (Charleston Gray)carwcgB0347
Carg18674Watermelon (Charleston Gray)carwcgB0346
Carg18674Watermelon (97103) v1carwmB0344
Carg18674Watermelon (97103) v1carwmB0345
Carg18674Watermelon (97103) v1carwmB0346
Carg18674Watermelon (97103) v2carwmbB0369
Carg18674Watermelon (97103) v2carwmbB0371