Carg18607 (gene) Silver-seed gourd

NameCarg18607
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_147 : 179058 .. 181408 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACAGGAACGACGTGAAGCAGTTCGACTCATCAAGAAATGCAAGTTTATCGGATAGAAAAAACTTGGTTGTTCTTGCACGAAAAAGAATGACCTTCTCGTTTAAACTTTCAAACCAGGTACTTGAGACATACTTTCATTCGCACCTTGGGATATTTAGCTGTTATAATAAATGTGACATCAATGATTTATTCCTCTATTTGTAAAAGCTTTACACCGAGCAAATCTATTATAGGAAACTTTCATTTTTTTCCCCTTTATCCTTCGTGTTTTACCTTTATAGTTACCAAGAACAATTCCTTATATAGGGTGAACAAGAACGAACTTTAACTAGCGTTCAAACTTTCTTAATATCCTTAGATTTTAAACCGAGTAGATAGAGGTATGTTGAAGAAAGATCATTATTGTTTAAACAATACTTGAGAGGGATTTAGAAATGGTGAAAATCACGTTTAAAAGTGTAGAATCAAACACTAAATTGATTCGAGCGTGACGTATTTGAGTTAAAAGATGTCGAATATAAAGAGTAGTAGACAAACAAAGAACACCGAGATAGCGTCTTTTTTTTTTTTTTTATTGTTTTAATAAAGAAAAGAGTAAAGAAAAGAAAAGGGGTTGAGAGACAAAATGAAGAAGCATGGGCAGAAATCTGCTGGGGGAACACATCATAGTTAAGAAGCTTCATCATGATTTGCTTCTTGACTGATCAAAGGAAGTATGTCATAAACGTGAAGACTAACCATCATCTGATCAAATTGCTTTTGTGGGCCACAAGATTTCCCAAGTTTAGACCACGTCATTCCCTCTGGGCTCCACACCCTTTTTATTTCCGTCCACAGTTTTTTCTCCCTTTTCTTTTCTAAACCCTAATTAATTAATTAACTCTAATACCTCACAAACCCATCTCGAGAGAGAGAATGAAGACTTTGTTATGTGATTAATTATATTTATATGATTATTTAAACATGTAATTGAAAGGGGTGGTGGTGGTCCATCAAATATACTGCTCATTTGCCTTGCATATCAAGCAACCTCCTTCTAATCTCTCTCTCTCTCTCTCTCTCTCTCACAGCAACATTCATGGCTAAAAGCATAATGACCAGCACCTCGGCTCGATACCCATGTGAGTTTCTCTCTCTCTCTCTTTCTCTCTCTAGCATTTCCTCATGAACAAACTTAGGCTCGAAAGTGAAACAGTCATGCAAAAAATGTAAAAAAAAAAAAAAAAAAAAAAGTACACAGAAAAAAGACAAAAACAAGAGGTGGGTGATTGTTAAATTTTTTTTTCTCTAGGATCTGAGTTTGTACTCAAAGATTTTGCCACGTTCAAGGCTTCTTATCACTTCAAGTTGGTAGTCGGTTGTTTTATCTTCATCTCCAAAACCTATTATTTCTACCCTCTCAACCTAACCTAACTGTGAGATACAAATCTCAAATTTTCTTTTCTAATCAAAGATATATGCGTTAACGAGTTGAGTTATGTTCAAATTGGATAAGGAAAAAAGAGAGAGTAAGTGGGTTGTGTGTGAAAATGGAGAAGTGGGTGTGGGCTAAAACAAAACGAAAAGATAGGATGGATGGAGTGAAATATTCGAAAGCCTTAGGAATTGGGCCTAAGAGATTAACAGCTGTGAAAGAAGGCCGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGCCTTTTGCTTTTGTAGTCAAGGGTTGAAGCAAAAGAAACAAACAAGGCAGCAGACAGAGATCAGCTCCTTGAGCCTTTACAAATCTCTCTCTCTCTCTCTCTCTTTCTTTTCCCACAAACCGCCTACATATGATATCATTTGATATTATGATATCATTTTGTTCTAAATTTCCCCAAACCCTTAAAGCTTCTGTGTAGGTTTTGAGGCTCACCTTTTTCTTTTCCCTTCTCTCTCTCTCTCTCTCTCTGTTCAGTTAAAGTTAAGAGCAAATTCTGGTTTGCTTCTCTACTTCTTCTTTCTCTTGTTAAAGCAAACCTTATAGCTCTCTCCAAACCCAAATCCACAGTTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAGGGTAAGTAAGTAAGTAAGTATATAGCTTTTATCTTCTCTTCTCTGTGGGTTTCAACAAAATTGAAGCTTTCCCTTCATCCTCTTTCTATTTTGAACAAAACCCAGTTCTTAGATTTCAAATTCAATCACTGGGGTTTCAAAAAGTTACCTCCTTTTTGTTTACAGTGATGAGAATTCACAATACCAAGTTGATATCAAGCTTGAAAGATAGAAGAAGAAGAAGAAGAAGGAGCTTCTAAAACGACGGCGTACAAAGAAGAATATCAAAGGGACGTT

mRNA sequence

ATTACAGGAACGACGTGAAGCAGTTCGACTCATCAAGAAATGCAAGTTTATCGGATAGAAAAAACTTGGTTGTTCTTGCACGAAAAAGAATGACCTTCTCGTTTAAACTTTCAAACCAGATAGAAGAAGAAGAAGAAGAAGGAGCTTCTAAAACGACGGCGTACAAAGAAGAATATCAAAGGGACGTT

Coding sequence (CDS)

ATGACCTTCTCGTTTAAACTTTCAAACCAGATAGAAGAAGAAGAAGAAGAAGGAGCTTCTAAAACGACGGCGTACAAAGAAGAATATCAAAGGGACGTT

Protein sequence

MTFSFKLSNQIEEEEEEGASKTTAYKEEYQRDV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18607-RACarg18607-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18607Wax gourdcarwgoB1041
Carg18607Wax gourdcarwgoB1039
Carg18607Wax gourdcarwgoB1043
Carg18607Silver-seed gourdcarcarB046
Carg18607Silver-seed gourdcarcarB108
Carg18607Silver-seed gourdcarcarB238
Carg18607Silver-seed gourdcarcarB528
Carg18607Cucumber (Gy14) v2carcgybB0881
Carg18607Cucumber (Gy14) v2carcgybB0882
Carg18607Cucumber (Gy14) v2carcgybB0886
Carg18607Cucumber (Gy14) v1carcgyB1014
Carg18607Cucumber (Gy14) v1carcgyB1016
Carg18607Cucumber (Gy14) v1carcgyB1017
Carg18607Cucurbita maxima (Rimu)carcmaB1234
Carg18607Cucurbita maxima (Rimu)carcmaB1235
Carg18607Cucurbita maxima (Rimu)carcmaB1236
Carg18607Cucurbita maxima (Rimu)carcmaB1237
Carg18607Cucurbita moschata (Rifu)carcmoB1205
Carg18607Cucurbita moschata (Rifu)carcmoB1206
Carg18607Cucurbita moschata (Rifu)carcmoB1207
Carg18607Cucurbita moschata (Rifu)carcmoB1208
Carg18607Cucurbita pepo (Zucchini)carcpeB1244
Carg18607Cucurbita pepo (Zucchini)carcpeB1245
Carg18607Cucurbita pepo (Zucchini)carcpeB1246
Carg18607Cucurbita pepo (Zucchini)carcpeB1247
Carg18607Cucurbita pepo (Zucchini)carcpeB1248
Carg18607Wild cucumber (PI 183967)carcpiB0929
Carg18607Wild cucumber (PI 183967)carcpiB0931
Carg18607Wild cucumber (PI 183967)carcpiB0934
Carg18607Cucumber (Chinese Long) v2carcuB0909
Carg18607Cucumber (Chinese Long) v2carcuB0911
Carg18607Cucumber (Chinese Long) v2carcuB0914
Carg18607Cucumber (Chinese Long) v3carcucB0932
Carg18607Cucumber (Chinese Long) v3carcucB0934
Carg18607Cucumber (Chinese Long) v3carcucB0937
Carg18607Bottle gourd (USVL1VR-Ls)carlsiB812
Carg18607Bottle gourd (USVL1VR-Ls)carlsiB815
Carg18607Bottle gourd (USVL1VR-Ls)carlsiB817
Carg18607Melon (DHL92) v3.5.1carmeB0882
Carg18607Melon (DHL92) v3.5.1carmeB0883
Carg18607Melon (DHL92) v3.5.1carmeB0885
Carg18607Melon (DHL92) v3.6.1carmedB0890
Carg18607Melon (DHL92) v3.6.1carmedB0891
Carg18607Melon (DHL92) v3.6.1carmedB0893
Carg18607Watermelon (Charleston Gray)carwcgB0870
Carg18607Watermelon (Charleston Gray)carwcgB0873
Carg18607Watermelon (Charleston Gray)carwcgB0875
Carg18607Watermelon (97103) v1carwmB0897
Carg18607Watermelon (97103) v1carwmB0898
Carg18607Watermelon (97103) v1carwmB0900
Carg18607Watermelon (97103) v2carwmbB0933
Carg18607Watermelon (97103) v2carwmbB0936
Carg18607Watermelon (97103) v2carwmbB0938
Carg18607Watermelon (97103) v2carwmbB0940