Carg18598 (gene) Silver-seed gourd

NameCarg18598
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_147 : 130753 .. 132948 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAACCCGTGATCATCTAATTAAGCCGAAGCCGGATTTGAGCAGTGAATCGTATATTTATGTAATTTTCATTTTTCTTTCCCTCTTTCGAAACCCTTAATTTTCTCTTCTTCTTCATTCATTCTTTAATTCCTTTTTGTTTTATTTTTACACATAATTTTATTTGGTTTTTGTTGGATTTTAATGAGTAGTTTTGGTTTCAGGTTCAAAAGGCTCTGTACAGTGTAAAGGAGAATTTGTGTTTAATATATATATATATTTTTTCTTACTTTGTTATGTGATAAGATATGAATATTGATTTATTGCTTTTTTTTTATTTGTTCTTTTTAAGATAAAACTTGTGGGTTTCACTTTAATGGGTAGCTAGATCCGCTACCCGATCATGACTTTCCTACCCTTAGAGGAAAAAATCCTCTTTTTTGCCGGTTGTGGGCAAAGAGGGATTCGAACCCCCAACACTGTGGTTCGTAGCCACGTGCTTTAATCCTCTGAGCTACAAATCTCACCCCGTCTCCACTGGATCTGTTCTTGAGGTACCCTAAGGAACCTTTCCTCTCCTCAGCCATTTGCCATTTCGATGTGAAAGTTCCTCCCTCGATAAGAATGGTGTGTTCCAAGGTGTGAAGTGAAAAAGAAAAGTGGGAGAGAAGGAGTTGGCTGTTTTTTTTTTTTTTTTTTTTTTGTAGGACCTCCCCTACGGTATCGTCACCACAGTAGAGTTTAACCGCTGAGTTTGGGATGGATTAGTGTGGTTCCTCTATGCTTAGGACACCAAAATATTGAACCATGAACTAAGAACGGCATAGGAGAAAAACATATTGGCTAGTAATTGTGAGGTCCCAATTCTTGACCCGAGGGAACACTAAAGACCTTTGCCCTACCATCCCATGGATAGATGAATCCCATGGATAGATGAATGGATAGATGAATCCCATGGATAGATGAATGCAAGACGATGAATGCAAGACGAAAACTAACTTGAATAGATTTTCAATGAGAAGTAGGGTGCACAAACTTTACAAATATGCTCAACATTGTACTGCTGAATCCATGGTGTGAATCAGGATGTTTGGTATCTTCCAACAGCCATGGCGCAGACCCTAAAATGCATTAGAATACCAGATTCCCTGTTACAGAAAAGCCAGAAAATAGATTCATGAAGCCAAGTACCAGAACACTGAGACGCGAACTCGACAAACACCGACAACGCCCAGCCGAAGAACAAGCAAATTATAACATCGGAGACTGGAAACAACAGCAACTGCCAACCATAAAACCAGAAAATGATGCCAAAAACTCTTATATGCTGAGCATGAACATAAACACAAGCCATAAGAACTTGAGAAAAAATGCCCTCAACTTCTAAATCATTCATACACAATGACCACCCAAAAAGGGAGCAACCTGAAATGAAGCCTTTACATATGAAAACTACAATGAACACCAAAAGATTCTGCACTTGAATGACTAATTCATGCGCATTGAACAGACCGATTATCATAAAAGATCATGAAGAACAGCTCAACCAAAAGAAAACGAATCTATACCATCAAATGAGTGAAGAAATCTAAGGGAAACAAAAATTCAAGTAAAAAACTTAAGAACTCAATGGATATTGTAATAGCAACACATGCAATCCTTTCATCTATAACCTGAGCTAATTGTACAATTCAGCGTAGTGTGAAAGATTATTAGATAAATTCGTAACAATGTCAGCATTGCACACAATAATCAATAATTTGAAGTAATCTATAACACATGCCTTCTTATCTCAAAATCTCAGCTTAATTCAAGCCTGTTTTATTTGTACTCAAAATTTGGCACAGGCGGTGCATCAAAGCTTTCCAAAATCGTTGTCTCACTTCCTCCACTCGACACTGCAGATTCCTTCTTCTTGCCTCCACCAAACCAACCTCCAAACCACGAATCACTACCAGAATCTGAAGAAGACGAAGAAGAAAGGCTTGTCAACTCCGCTTGCGGTAGAGACAGGGGAGGAGCACGGCCAGGTAATTGGCCTGTAGGATATCCAGGTACACTAGCCATACCAGCAGGCTCCTCCGTGACAACAGGCATATTCTGTTGCTGGCTGAGGACTTTATTGAGCATAATCCCAGCTCCTTCAATCAACGCTAACAAAACGCCGCCAAAAACAGCAGAACGAGCTGCTGATGCAGGTCCCTGTCGCATCTGA

mRNA sequence

ATGATAACCCGTGATCATCTAATTAAGCCGAAGCCGGATTTGAGCAGTGAATCGTATATTTATGACCTCCCCTACGGCGGTGCATCAAAGCTTTCCAAAATCGTTGTCTCACTTCCTCCACTCGACACTGCAGATTCCTTCTTCTTGCCTCCACCAAACCAACCTCCAAACCACGAATCACTACCAGAATCTGAAGAAGACGAAGAAGAAAGGCTTGTCAACTCCGCTTGCGGTAGAGACAGGGGAGGAGCACGGCCAGGTAATTGGCCTGTAGGATATCCAGGTACACTAGCCATACCAGCAGGCTCCTCCGTGACAACAGGCATATTCTGTTGCTGGCTGAGGACTTTATTGAGCATAATCCCAGCTCCTTCAATCAACGCTAACAAAACGCCGCCAAAAACAGCAGAACGAGCTGCTGATGCAGGTCCCTGTCGCATCTGA

Coding sequence (CDS)

ATGATAACCCGTGATCATCTAATTAAGCCGAAGCCGGATTTGAGCAGTGAATCGTATATTTATGACCTCCCCTACGGCGGTGCATCAAAGCTTTCCAAAATCGTTGTCTCACTTCCTCCACTCGACACTGCAGATTCCTTCTTCTTGCCTCCACCAAACCAACCTCCAAACCACGAATCACTACCAGAATCTGAAGAAGACGAAGAAGAAAGGCTTGTCAACTCCGCTTGCGGTAGAGACAGGGGAGGAGCACGGCCAGGTAATTGGCCTGTAGGATATCCAGGTACACTAGCCATACCAGCAGGCTCCTCCGTGACAACAGGCATATTCTGTTGCTGGCTGAGGACTTTATTGAGCATAATCCCAGCTCCTTCAATCAACGCTAACAAAACGCCGCCAAAAACAGCAGAACGAGCTGCTGATGCAGGTCCCTGTCGCATCTGA

Protein sequence

MITRDHLIKPKPDLSSESYIYDLPYGGASKLSKIVVSLPPLDTADSFFLPPPNQPPNHESLPESEEDEEERLVNSACGRDRGGARPGNWPVGYPGTLAIPAGSSVTTGIFCCWLRTLLSIIPAPSINANKTPPKTAERAADAGPCRI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18598-RACarg18598-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..147

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18598Lsi11G002250Bottle gourd (USVL1VR-Ls)carlsiB815
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18598Silver-seed gourdcarcarB046
Carg18598Silver-seed gourdcarcarB108
Carg18598Silver-seed gourdcarcarB238
Carg18598Silver-seed gourdcarcarB528
Carg18598Cucumber (Gy14) v2carcgybB0881
Carg18598Cucumber (Gy14) v2carcgybB0886
Carg18598Cucumber (Gy14) v1carcgyB1014
Carg18598Cucumber (Gy14) v1carcgyB1017
Carg18598Cucurbita maxima (Rimu)carcmaB1234
Carg18598Cucurbita maxima (Rimu)carcmaB1235
Carg18598Cucurbita maxima (Rimu)carcmaB1236
Carg18598Cucurbita maxima (Rimu)carcmaB1237
Carg18598Cucurbita moschata (Rifu)carcmoB1205
Carg18598Cucurbita moschata (Rifu)carcmoB1206
Carg18598Cucurbita moschata (Rifu)carcmoB1207
Carg18598Cucurbita moschata (Rifu)carcmoB1208
Carg18598Cucurbita pepo (Zucchini)carcpeB1244
Carg18598Cucurbita pepo (Zucchini)carcpeB1246
Carg18598Cucurbita pepo (Zucchini)carcpeB1247
Carg18598Cucurbita pepo (Zucchini)carcpeB1248
Carg18598Wild cucumber (PI 183967)carcpiB0929
Carg18598Wild cucumber (PI 183967)carcpiB0934
Carg18598Cucumber (Chinese Long) v2carcuB0909
Carg18598Cucumber (Chinese Long) v2carcuB0914
Carg18598Cucumber (Chinese Long) v3carcucB0932
Carg18598Cucumber (Chinese Long) v3carcucB0937
Carg18598Bottle gourd (USVL1VR-Ls)carlsiB817
Carg18598Melon (DHL92) v3.5.1carmeB0882
Carg18598Melon (DHL92) v3.5.1carmeB0883
Carg18598Melon (DHL92) v3.6.1carmedB0890
Carg18598Melon (DHL92) v3.6.1carmedB0891
Carg18598Watermelon (Charleston Gray)carwcgB0873
Carg18598Watermelon (Charleston Gray)carwcgB0875
Carg18598Watermelon (97103) v1carwmB0897
Carg18598Watermelon (97103) v1carwmB0898
Carg18598Watermelon (97103) v2carwmbB0936
Carg18598Watermelon (97103) v2carwmbB0938
Carg18598Watermelon (97103) v2carwmbB0940
Carg18598Wax gourdcarwgoB1041
Carg18598Wax gourdcarwgoB1043