Carg18560 (gene) Silver-seed gourd

Overview
NameCarg18560
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPeroxidase
LocationCucurbita_argyrosperma_scaffold_109 : 449141 .. 450800 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCCTCTGTTCTTCCCTTTATTGATCTTTCTTTTTGCTCAAATGGGTCGCTTTAATCTTCTTATTGCGCTGTCTCTTCTTTCCCTCTCCGTCTTCCCTTCTCCCTCTGTCGCCCAACTCCGACAAAACTTCTACGCCGACATTTGCCCAAATGTCGAAACCATTGTCCGCAACGAAGTCGCTAAAAAATTTCAGCAGACTTTCGTTACTGTTCCTGCCACTCTCCGTCTCTTCTTTCATGATTGCTTCGTTCAGGTCATTTTCTATGATTTGTTTCAATTCAACCGTGTTTTTTGTGATGGGAATTGCAGAGTTTCATTATTTTGATTCTTTTCGTATTTAGGGATGTGATGCCTCGGTGATCATTGCTTCCACTGCATCCAACACGGCCGAGAAGGATCATCCCGATAACCTGTCGTTGGCCGGAGATGGATTCGACACTGTCATCAAAGCTAAAGCCGCTGTCGACGCCATACCTCAATGCCGAAACAGAGTCTCCTGCGCCGATATTCTAACTATGGCCACTCGAGACGTCATAAAACTGGTACTTAACATTTGTTTTAAAAATTAACCTTTGAGAATTGTTGGAAGGGAGTCGTAATTTTAGGAATTTATAACTAACGAATACATCTCTATTGATGCGAAGAATCTTGTGGACTCTGAACCCAAAATTATGTTTAGTAATGTTCCAAAACTACATCTAATTCAAATGGGTTGGAATTAATTGCAGTCGGGCGGACCGTGGTACGCGGTGGAGCTGGGAAGATTAGACGGGCTAGTTTCTAAAGCCTCCGACGTGGACGGTAGACTCCCAGGGCCAACATTTAATCTCAACCAGCTCAATTCTCTGTTTGCTGCTAATGGGCTTTCGCAACAAGACATGATCGCACTATCAGGTAAACGTGGATCTAATTAGAATCTGACACGTGTAAAACACCCGTGAACACTTTGTCGTGGAGCCCTTGTTTTGTTGTTCTGACTGTCTGAGTAAAATGGCAGCGGCTCACACGCTTGGATTCTCGCACTGCGGGAAGTTCGCAAATCGAATTTACAGTTTTGCCCCGGGGAATCCAGTGGACCCTACACTAAACAAAACCTACGCAACTCAGCTACAACAAATGTGCCCGAAGAATGTGGACCCCAGAGTGGCGATCAACATGGACCCAATCACGCCTAGAACATTCGACAACATATACTTCAAGAACCTCCAGCAGGGAATGGGTCTGTTCACGTCGGACCAGGTTTTGTTCACGGACACGAGATCCCGACCCACGGTGGACGCATGGGCCGGCGATTCCCAGGCCTTTAATAAGGCGTTTGTTGACGCCATGACGAAGCTGGGGCGGGTGGGCGTGAAGAGCGGTAGAAACGGGAACATCCGACGCGACTGTGGTGCTTTCAACTGAAACGACAAATAGCCTCACCTCGTATTACATTAACGACGTGTGTATAGCGGATACGACACGACAGGATGAGCTGATTGGCGGCGGAATTGAGAATGAGTTAATAAAATGAGGGATTTGTTTTACTTTCACTGCGAATGTAATTAGGATTTAATTTTAATAAAGTAGTAACACATAGCTGTGTCCAACACACATGTTTAAGCAAATTTGCTATTGGTCGCTACATTTCTGTTTTTTTCTATTTAAATCTTTTTTT

mRNA sequence

TCATCCTCTGTTCTTCCCTTTATTGATCTTTCTTTTTGCTCAAATGGGTCGCTTTAATCTTCTTATTGCGCTGTCTCTTCTTTCCCTCTCCGTCTTCCCTTCTCCCTCTGTCGCCCAACTCCGACAAAACTTCTACGCCGACATTTGCCCAAATGTCGAAACCATTGTCCGCAACGAAGTCGCTAAAAAATTTCAGCAGACTTTCGTTACTGTTCCTGCCACTCTCCGTCTCTTCTTTCATGATTGCTTCGTTCAGGGATGTGATGCCTCGGTGATCATTGCTTCCACTGCATCCAACACGGCCGAGAAGGATCATCCCGATAACCTGTCGTTGGCCGGAGATGGATTCGACACTGTCATCAAAGCTAAAGCCGCTGTCGACGCCATACCTCAATGCCGAAACAGAGTCTCCTGCGCCGATATTCTAACTATGGCCACTCGAGACGTCATAAAACTGGTACTTAACATTTGTTTTAAAAATTAACCTTTGAGAATTGTTGGAAGGGAGTCGTAATTTTAGGAATTTATAACTAACGAATACATCTCTATTGATGCGAAGAATCTTGTGGACTCTGAACCCAAAATTATGTTTAGTAATGTTCCAAAACTACATCTAATTCAAATGGGTTGGAATTAATTGCAGTCGGGCGGACCGTGGTACGCGGTGGAGCTGGGAAGATTAGACGGGCTAGTTTCTAAAGCCTCCGACGTGGACGGTAGACTCCCAGGGCCAACATTTAATCTCAACCAGCTCAATTCTCTGTTTGCTGCTAATGGGCTTTCGCAACAAGACATGATCGCACTATCAGCGGCTCACACGCTTGGATTCTCGCACTGCGGGAAGTTCGCAAATCGAATTTACAGTTTTGCCCCGGGGAATCCAGTGGACCCTACACTAAACAAAACCTACGCAACTCAGCTACAACAAATGTGCCCGAAGAATGTGGACCCCAGAGTGGCGATCAACATGGACCCAATCACGCCTAGAACATTCGACAACATATACTTCAAGAACCTCCAGCAGGGAATGGGTCTGTTCACGTCGGACCAGGTTTTGTTCACGGACACGAGATCCCGACCCACGGTGGACGCATGGGCCGGCGATTCCCAGGCCTTTAATAAGGCGTTTGTTGACGCCATGACGAAGCTGGGGCGGGTGGGCGTGAAGAGCGGTAGAAACGGGAACATCCGACGCGACTGTGGTGCTTTCAACTGAAACGACAAATAGCCTCACCTCGTATTACATTAACGACGTGTGTATAGCGGATACGACACGACAGGATGAGCTGATTGGCGGCGGAATTGAGAATGAGTTAATAAAATGAGGGATTTGTTTTACTTTCACTGCGAATGTAATTAGGATTTAATTTTAATAAAGTAGTAACACATAGCTGTGTCCAACACACATGTTTAAGCAAATTTGCTATTGGTCGCTACATTTCTGTTTTTTTCTATTTAAATCTTTTTTT

Coding sequence (CDS)

ATGGGTCGCTTTAATCTTCTTATTGCGCTGTCTCTTCTTTCCCTCTCCGTCTTCCCTTCTCCCTCTGTCGCCCAACTCCGACAAAACTTCTACGCCGACATTTGCCCAAATGTCGAAACCATTGTCCGCAACGAAGTCGCTAAAAAATTTCAGCAGACTTTCGTTACTGTTCCTGCCACTCTCCGTCTCTTCTTTCATGATTGCTTCGTTCAGGGATGTGATGCCTCGGTGATCATTGCTTCCACTGCATCCAACACGGCCGAGAAGGATCATCCCGATAACCTGTCGTTGGCCGGAGATGGATTCGACACTGTCATCAAAGCTAAAGCCGCTGTCGACGCCATACCTCAATGCCGAAACAGAGTCTCCTGCGCCGATATTCTAACTATGGCCACTCGAGACGTCATAAAACTGGTACTTAACATTTGTTTTAAAAATTAA

Protein sequence

MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRNRVSCADILTMATRDVIKLVLNICFKN
Homology
[Close]
BLAST of Carg18560 vs. NCBI nr
Match: XP_023518213.1 (peroxidase 51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 134/138 (97.10%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVET+VRNEV KKFQQTFVTVPAT
Sbjct: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETVVRNEVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIASTASN AEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           RVSCADILTMATRDVI L
Sbjct: 121 RVSCADILTMATRDVIAL 138

[Close]
BLAST of Carg18560 vs. NCBI nr
Match: XP_023003008.1 (peroxidase 73-like [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MGRFNLLI LSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEV KKFQQTFVTVPAT
Sbjct: 1   MGRFNLLIVLSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIASTASN AEKDHPDNLSLAGDGFDTVIKAKAA+DAIPQCRN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAAIDAIPQCRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           RVSCADILT+ATRDVIKL
Sbjct: 121 RVSCADILTIATRDVIKL 138

[Close]
BLAST of Carg18560 vs. NCBI nr
Match: XP_022962686.1 (peroxidase 51-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 4.8e-66
Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MGRFNLL+ALSLLSL VFPSPSVAQLRQNFYADICPNVETIVRNEV KKFQQTFVTVPAT
Sbjct: 1   MGRFNLLVALSLLSLFVFPSPSVAQLRQNFYADICPNVETIVRNEVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIASTASN AEKDHPDNLSLAGDGFDTVIKAK AVDAIPQ RN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKTAVDAIPQSRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           RVSCADILTMATRDVIKL
Sbjct: 121 RVSCADILTMATRDVIKL 138

[Close]
BLAST of Carg18560 vs. NCBI nr
Match: XP_022950891.1 (peroxidase 73-like [Cucurbita moschata] >XP_023543176.1 peroxidase 73-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62
Identity = 124/138 (89.86%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MGRFNLLIALSLLSL VFPSP++AQLRQNFYA+ICPNVE IVR++V KKFQQTFVTVPAT
Sbjct: 1   MGRFNLLIALSLLSLFVFPSPTLAQLRQNFYANICPNVENIVRSQVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIAST SN AEKDHPDNLSLAGDGFDTVIKAKAA+DAIPQCRN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           RVSCADIL +ATRDVI L
Sbjct: 121 RVSCADILALATRDVIAL 138

[Close]
BLAST of Carg18560 vs. NCBI nr
Match: XP_022978907.1 (peroxidase 73-like [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 5.5e-62
Identity = 123/138 (89.13%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MGRFNLLIALSLLSL VFPSP++AQLR+NFYA+ICPNVE IVR++V KKFQQTFVTVPAT
Sbjct: 1   MGRFNLLIALSLLSLFVFPSPTLAQLRKNFYANICPNVENIVRSQVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIAST SN AEKDHPDNLSLAGDGFDTVIKAKAA+DAIPQCRN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           RVSCADIL +ATRDVI L
Sbjct: 121 RVSCADILALATRDVIAL 138

[Close]
BLAST of Carg18560 vs. TAIR10
Match: AT4G37530.1 (Peroxidase superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50
Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           M + NLL  L +LSL +  + S AQLR +FYA  CPNVE IVRN V KK QQTF T+PAT
Sbjct: 4   MNKTNLL--LLILSLFLAINLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPAT 63

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRL+FHDCFV GCDASV+IAST +N AEKDH DNLSLAGDGFDTVIKAK AVDA+P CRN
Sbjct: 64  LRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRN 123

Query: 121 RVSCADILTMATRDVIKL 139
           +VSCADILTMATRDV+ L
Sbjct: 124 KVSCADILTMATRDVVNL 139

[Close]
BLAST of Carg18560 vs. TAIR10
Match: AT4G37520.1 (Peroxidase superfamily protein)

HSP 1 Score: 194.9 bits (494), Expect = 3.5e-50
Identity = 100/138 (72.46%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           + + NLL  L LLSL +    S AQLR+NFYA  CPNVE IVRN V KK QQTF T+PAT
Sbjct: 4   VNKTNLL--LLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPAT 63

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRL+FHDCFV GCDASV+IAST +N AEKDH +NLSLAGDGFDTVIKAK A+DA+P CRN
Sbjct: 64  LRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRN 123

Query: 121 RVSCADILTMATRDVIKL 139
           +VSCADILTMATRDV+ L
Sbjct: 124 KVSCADILTMATRDVVNL 139

[Close]
BLAST of Carg18560 vs. TAIR10
Match: AT5G67400.1 (root hair specific 19)

HSP 1 Score: 194.9 bits (494), Expect = 3.5e-50
Identity = 92/137 (67.15%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 1   MGRFNLLIALSL-LSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           M RF+L++ ++L L++S+FP  + AQL+ NFY + CPNVE IV+  V +K +QTFVT+PA
Sbjct: 1   MARFSLVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFV GCDASV+I ST +N AEKDHPDN+SLAGDGFD VIKAK A+DAIP C+
Sbjct: 61  TLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCK 120

Query: 121 NRVSCADILTMATRDVI 137
           N+VSCADIL +ATRDV+
Sbjct: 121 NKVSCADILALATRDVV 137

[Close]
BLAST of Carg18560 vs. TAIR10
Match: AT3G49960.1 (Peroxidase superfamily protein)

HSP 1 Score: 190.3 bits (482), Expect = 8.5e-49
Identity = 92/137 (67.15%), Postives = 111/137 (81.02%), Query Frame = 0 

Query: 1   MGRFNLLIALSL-LSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           M RF++++ + L L +SVFP  + AQL + FY+  CPNVE IVRN V KK ++TFV VPA
Sbjct: 1   MARFDIVLLIGLCLIISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFV GCDASV+I ST  N AEKDHPDN+SLAGDGFD VI+AK A+D+ P CR
Sbjct: 61  TLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCR 120

Query: 121 NRVSCADILTMATRDVI 137
           N+VSCADILT+ATRDV+
Sbjct: 121 NKVSCADILTLATRDVV 137

[Close]
BLAST of Carg18560 vs. TAIR10
Match: AT4G30170.1 (Peroxidase family protein)

HSP 1 Score: 173.7 bits (439), Expect = 8.3e-44
Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 0 

Query: 24  AQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTA 83
           AQLR  FY + CPNVETIVRN V +KFQQTFVT PATLRLFFHDCFV+GCDAS++IAS  
Sbjct: 25  AQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIAS-- 84

Query: 84  SNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRNRVSCADILTMATRDVIKL 139
              +E+DHPD++SLAGDGFDTV+KAK AVD+ P CRN+VSCADIL +ATR+V+ L
Sbjct: 85  --PSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVL 135

[Close]
BLAST of Carg18560 vs. Swiss-Prot
Match: sp|Q9SZE7|PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana OX=3702 GN=PER51 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-49
Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           M + NLL  L +LSL +  + S AQLR +FYA  CPNVE IVRN V KK QQTF T+PAT
Sbjct: 4   MNKTNLL--LLILSLFLAINLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPAT 63

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRL+FHDCFV GCDASV+IAST +N AEKDH DNLSLAGDGFDTVIKAK AVDA+P CRN
Sbjct: 64  LRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRN 123

Query: 121 RVSCADILTMATRDVIKL 139
           +VSCADILTMATRDV+ L
Sbjct: 124 KVSCADILTMATRDVVNL 139

[Close]
BLAST of Carg18560 vs. Swiss-Prot
Match: sp|Q43731|PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana OX=3702 GN=PER50 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.3e-49
Identity = 100/138 (72.46%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           + + NLL  L LLSL +    S AQLR+NFYA  CPNVE IVRN V KK QQTF T+PAT
Sbjct: 4   VNKTNLL--LLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPAT 63

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRL+FHDCFV GCDASV+IAST +N AEKDH +NLSLAGDGFDTVIKAK A+DA+P CRN
Sbjct: 64  LRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRN 123

Query: 121 RVSCADILTMATRDVIKL 139
           +VSCADILTMATRDV+ L
Sbjct: 124 KVSCADILTMATRDVVNL 139

[Close]
BLAST of Carg18560 vs. Swiss-Prot
Match: sp|Q43873|PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.3e-49
Identity = 92/137 (67.15%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 1   MGRFNLLIALSL-LSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           M RF+L++ ++L L++S+FP  + AQL+ NFY + CPNVE IV+  V +K +QTFVT+PA
Sbjct: 1   MARFSLVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFV GCDASV+I ST +N AEKDHPDN+SLAGDGFD VIKAK A+DAIP C+
Sbjct: 61  TLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCK 120

Query: 121 NRVSCADILTMATRDVI 137
           N+VSCADIL +ATRDV+
Sbjct: 121 NKVSCADILALATRDVV 137

[Close]
BLAST of Carg18560 vs. Swiss-Prot
Match: sp|Q96510|PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana OX=3702 GN=PER35 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-47
Identity = 92/137 (67.15%), Postives = 111/137 (81.02%), Query Frame = 0 

Query: 1   MGRFNLLIALSL-LSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           M RF++++ + L L +SVFP  + AQL + FY+  CPNVE IVRN V KK ++TFV VPA
Sbjct: 1   MARFDIVLLIGLCLIISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFV GCDASV+I ST  N AEKDHPDN+SLAGDGFD VI+AK A+D+ P CR
Sbjct: 61  TLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCR 120

Query: 121 NRVSCADILTMATRDVI 137
           N+VSCADILT+ATRDV+
Sbjct: 121 NKVSCADILTLATRDVV 137

[Close]
BLAST of Carg18560 vs. Swiss-Prot
Match: sp|Q96522|PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana OX=3702 GN=PER45 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-42
Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 0 

Query: 24  AQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTA 83
           AQLR  FY + CPNVETIVRN V +KFQQTFVT PATLRLFFHDCFV+GCDAS++IAS  
Sbjct: 25  AQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIAS-- 84

Query: 84  SNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRNRVSCADILTMATRDVIKL 139
              +E+DHPD++SLAGDGFDTV+KAK AVD+ P CRN+VSCADIL +ATR+V+ L
Sbjct: 85  --PSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVL 135

[Close]
BLAST of Carg18560 vs. TrEMBL
Match: tr|A0A0A0KFX4|A0A0A0KFX4_CUCSA (Peroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G495000 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-61
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSV-FPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           MGRFNL++ LSLLSL + FPSP++AQLRQNFYA+ICPNVE IVR+EV KKFQQTFVTVPA
Sbjct: 1   MGRFNLIVTLSLLSLFLFFPSPTLAQLRQNFYANICPNVENIVRSEVTKKFQQTFVTVPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFVQGCDASVIIASTASN AEKDHPDNLSLAGDGFDTVIKAKAA+DAIPQCR
Sbjct: 61  TLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCR 120

Query: 121 NRVSCADILTMATRDVIKL 139
           NRVSCADIL +ATRDVI L
Sbjct: 121 NRVSCADILALATRDVIAL 139

[Close]
BLAST of Carg18560 vs. TrEMBL
Match: tr|A0A1S3B0I8|A0A1S3B0I8_CUCME (Peroxidase OS=Cucumis melo OX=3656 GN=LOC103484837 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.9e-61
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSV-FPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           MGRFNL++ LSLLSL + FPSP++AQLRQNFYA+ICPNVE IVR+EV KKFQQTFVTVPA
Sbjct: 1   MGRFNLILTLSLLSLFLFFPSPTLAQLRQNFYANICPNVENIVRSEVTKKFQQTFVTVPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           TLRLFFHDCFVQGCDASVIIASTASN AEKDHPDNLSLAGDGFDTVIKAKAA+DAIPQCR
Sbjct: 61  TLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCR 120

Query: 121 NRVSCADILTMATRDVIKL 139
           NRVSCADIL +ATRDVI L
Sbjct: 121 NRVSCADILALATRDVIAL 139

[Close]
BLAST of Carg18560 vs. TrEMBL
Match: tr|A0A2H3Y305|A0A2H3Y305_PHODC (Peroxidase OS=Phoenix dactylifera OX=42345 GN=LOC103709214 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-55
Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPAT 60
           MG   + + L  LS+ +FP  S AQLR+N+YA+ICPNVE+IVRN V KKFQQTFVTVPAT
Sbjct: 1   MGNIRVALFLLTLSICLFPQLSSAQLRRNYYANICPNVESIVRNAVTKKFQQTFVTVPAT 60

Query: 61  LRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCRN 120
           LRLFFHDCFVQGCDASVIIASTA+NTAEKDHPDNLSLAGDGFDTVIKAK AVDA+PQCRN
Sbjct: 61  LRLFFHDCFVQGCDASVIIASTANNTAEKDHPDNLSLAGDGFDTVIKAKEAVDAVPQCRN 120

Query: 121 RVSCADILTMATRDVIKL 139
           +VSCADIL MATRDV+ L
Sbjct: 121 KVSCADILAMATRDVVAL 138

[Close]
BLAST of Carg18560 vs. TrEMBL
Match: tr|B6E500|B6E500_LITCN (Peroxidase OS=Litchi chinensis OX=151069 GN=POD5 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 4.8e-54
Identity = 112/139 (80.58%), Postives = 122/139 (87.77%), Query Frame = 0 

Query: 1   MGRFNLLIALS-LLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVPA 60
           MGRF L+  LS LL L  FP  S+AQLR+N+YA+ICPNVE IVRNEV KKF+QTFVTVPA
Sbjct: 1   MGRFCLVFLLSLLLCLCSFPHTSLAQLRRNYYANICPNVEQIVRNEVNKKFRQTFVTVPA 60

Query: 61  TLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQCR 120
           T+RLFFHDCFVQGCDASV IAST  NTAEKDHPDNLSLAGDGFDTVIKAKAAVD+ P+CR
Sbjct: 61  TIRLFFHDCFVQGCDASVTIASTGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDSNPRCR 120

Query: 121 NRVSCADILTMATRDVIKL 139
           N+VSCADIL MATRDVI L
Sbjct: 121 NKVSCADILAMATRDVIAL 139

[Close]
BLAST of Carg18560 vs. TrEMBL
Match: tr|A0A2R6S164|A0A2R6S164_ACTCH (Peroxidase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00538 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54
Identity = 110/140 (78.57%), Postives = 124/140 (88.57%), Query Frame = 0 

Query: 1   MGRFNLLIALSLLS--LSVFPSPSVAQLRQNFYADICPNVETIVRNEVAKKFQQTFVTVP 60
           M RFN+L+AL  +S  LS+FP+ + AQL+QN+YA+ CPNVETIVRN V +KF+QTFVTVP
Sbjct: 1   MSRFNILVALWSVSLCLSIFPNLASAQLKQNYYAENCPNVETIVRNAVTQKFKQTFVTVP 60

Query: 61  ATLRLFFHDCFVQGCDASVIIASTASNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPQC 120
            TLRLFFHDCFVQGCDASVIIAS+ SN AEKDHPDNLSLAGDGFDTVIKAKAAVDA+  C
Sbjct: 61  GTLRLFFHDCFVQGCDASVIIASSGSNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVASC 120

Query: 121 RNRVSCADILTMATRDVIKL 139
           RN+VSCADILTMATRDVI L
Sbjct: 121 RNKVSCADILTMATRDVIAL 140

The following BLAST results are available for this feature:
BLAST of Carg18560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023518213.11.2e-6797.10peroxidase 51-like [Cucurbita pepo subsp. pepo][more]
XP_023003008.12.0e-6796.38peroxidase 73-like [Cucurbita maxima][more]
XP_022962686.14.8e-6695.65peroxidase 51-like [Cucurbita moschata][more]
XP_022950891.11.9e-6289.86peroxidase 73-like [Cucurbita moschata] >XP_023543176.1 peroxidase 73-like [Cucu... [more]
XP_022978907.15.5e-6289.13peroxidase 73-like [Cucurbita maxima][more]
BLAST of Carg18560 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37530.11.6e-5073.19Peroxidase superfamily protein[more]
AT4G37520.13.5e-5072.46Peroxidase superfamily protein[more]
AT5G67400.13.5e-5067.15root hair specific 19[more]
AT3G49960.18.5e-4967.15Peroxidase superfamily protein[more]
AT4G30170.18.3e-4472.17Peroxidase family protein[more]
BLAST of Carg18560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZE7|PER51_ARATH2.8e-4973.19Peroxidase 51 OS=Arabidopsis thaliana OX=3702 GN=PER51 PE=2 SV=1[more]
sp|Q43731|PER50_ARATH6.3e-4972.46Peroxidase 50 OS=Arabidopsis thaliana OX=3702 GN=PER50 PE=1 SV=1[more]
sp|Q43873|PER73_ARATH6.3e-4967.15Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1[more]
sp|Q96510|PER35_ARATH1.5e-4767.15Peroxidase 35 OS=Arabidopsis thaliana OX=3702 GN=PER35 PE=1 SV=1[more]
sp|Q96522|PER45_ARATH1.5e-4272.17Peroxidase 45 OS=Arabidopsis thaliana OX=3702 GN=PER45 PE=1 SV=1[more]
BLAST of Carg18560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFX4|A0A0A0KFX4_CUCSA5.3e-6187.77Peroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G495000 PE=3 SV=1[more]
tr|A0A1S3B0I8|A0A1S3B0I8_CUCME6.9e-6187.77Peroxidase OS=Cucumis melo OX=3656 GN=LOC103484837 PE=3 SV=1[more]
tr|A0A2H3Y305|A0A2H3Y305_PHODC1.9e-5579.71Peroxidase OS=Phoenix dactylifera OX=42345 GN=LOC103709214 PE=3 SV=1[more]
tr|B6E500|B6E500_LITCN4.8e-5480.58Peroxidase OS=Litchi chinensis OX=151069 GN=POD5 PE=2 SV=2[more]
tr|A0A2R6S164|A0A2R6S164_ACTCH6.3e-5478.57Peroxidase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00538 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006979response to oxidative stress
Vocabulary: Molecular Function
TermDefinition
GO:0004601peroxidase activity
GO:0020037heme binding
Vocabulary: INTERPRO
TermDefinition
IPR010255Haem_peroxidase
IPR019794Peroxidases_AS
IPR002016Haem_peroxidase_pln/fun/bac
IPR000823Peroxidase_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18560-RACarg18560-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000823Plant peroxidasePRINTSPR00461PLPEROXIDASEcoord: 35..54
score: 33.14
coord: 59..79
score: 66.25
coord: 100..113
score: 38.31
coord: 121..131
score: 71.66
IPR002016Haem peroxidase, plant/fungal/bacterialPRINTSPR00458PEROXIDASEcoord: 122..139
score: 39.47
coord: 57..71
score: 46.55
IPR002016Haem peroxidase, plant/fungal/bacterialPFAMPF00141peroxidasecoord: 42..138
e-value: 8.7E-23
score: 81.1
IPR002016Haem peroxidase, plant/fungal/bacterialPROSITEPS50873PEROXIDASE_4coord: 25..146
score: 29.932
NoneNo IPR availableGENE3DG3DSA:1.10.520.10coord: 26..144
e-value: 3.9E-44
score: 152.2
NoneNo IPR availablePANTHERPTHR31517FAMILY NOT NAMEDcoord: 6..139
NoneNo IPR availablePANTHERPTHR31517:SF33SUBFAMILY NOT NAMEDcoord: 6..139
IPR019794Peroxidase, active sitePROSITEPS00436PEROXIDASE_2coord: 57..68
IPR010255Haem peroxidaseSUPERFAMILYSSF48113Heme-dependent peroxidasescoord: 25..138

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18560Cucsa.103030Cucumber (Gy14) v1carcgyB0001
Carg18560CsGy6G028220Cucumber (Gy14) v2carcgybB0003
Carg18560Cla97C01G016570Watermelon (97103) v2carwmbB0002
Carg18560Bhi03G000774Wax gourdcarwgoB0003
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18560Carg00802Silver-seed gourdcarcarB001
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18560Cucumber (Gy14) v2carcgybB0001
Carg18560Cucumber (Gy14) v1carcgyB0003
Carg18560Cucurbita maxima (Rimu)carcmaB0002
Carg18560Cucurbita maxima (Rimu)carcmaB0003
Carg18560Cucurbita maxima (Rimu)carcmaB0004
Carg18560Cucurbita moschata (Rifu)carcmoB0004
Carg18560Cucurbita moschata (Rifu)carcmoB0005
Carg18560Cucurbita pepo (Zucchini)carcpeB0001
Carg18560Cucurbita pepo (Zucchini)carcpeB0002
Carg18560Wild cucumber (PI 183967)carcpiB0001
Carg18560Wild cucumber (PI 183967)carcpiB0003
Carg18560Cucumber (Chinese Long) v2carcuB0001
Carg18560Cucumber (Chinese Long) v2carcuB0003
Carg18560Cucumber (Chinese Long) v3carcucB0001
Carg18560Cucumber (Chinese Long) v3carcucB0003
Carg18560Bottle gourd (USVL1VR-Ls)carlsiB001
Carg18560Bottle gourd (USVL1VR-Ls)carlsiB003
Carg18560Melon (DHL92) v3.5.1carmeB0001
Carg18560Melon (DHL92) v3.5.1carmeB0002
Carg18560Melon (DHL92) v3.6.1carmedB0001
Carg18560Melon (DHL92) v3.6.1carmedB0003
Carg18560Watermelon (Charleston Gray)carwcgB0002
Carg18560Watermelon (Charleston Gray)carwcgB0003
Carg18560Watermelon (97103) v1carwmB0004
Carg18560Watermelon (97103) v1carwmB0005
Carg18560Watermelon (97103) v2carwmbB0003
Carg18560Wax gourdcarwgoB0001