Carg18526 (gene) Silver-seed gourd

NameCarg18526
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_109 : 289915 .. 291329 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATGCCATTGATCGGTCTATTCCATTATCGAGGAAACTACATATGGGACCTTGTGTTCTAAAACTTTCCACAAGGAGAAAGGTTAAATCTTCTACATGCTTATTGCAGCTTGCAGCTTCACTGGGAAACTGGAAACTGATATTTTACATCTATCCGCGGAACGGTAAGGTATGAACTTTCAAACGATCATTTCCAAAGTAATAGTTCACTCCTTTTAACGTTTAGGAAAGGATCTCTAAGTACGATAATCTGTCTCATCGTAGATTTCCTCCTGCAGTGAACAAAGATTAAGGGTAATCAAGCTTTGCAGTATTGATAGGAAGATGAAGCTGTAGATAGAGGATATGCCTGCTATACCTGTAAAAGCTCCTCAATGACATCTTCAAGTGTTATGATGCCAATTGCTTCCCCCTCTTCAGTAAGCTTGGCCAGCATGTCATCTGCAATATGCAGGACCTCTGAGTCGAAGTCCTTGGACCATTTCTTACTTCCAGAAAACTTCCGATGGTAATTACTACGATCCACAAATGTGTTTAGTCTTTTCAGAGATCTCTTGCTCTTTAAACTCTTTTCCTGTGGATGATTTTCACCATCGATGTCCACTTTCACATCTCTTGCTGCATGTGCATTTGTGTTATATGTATCATCGACCAAGTTAAATAGAAATGAAGAAGGGTAAATGCTTACCCTCAAGTTGATTCCCGCTAATGGGCTTCTCTGGATTTTCCTTTTCTCTTACTACCACGGCCATATGACTGTGACCTTTCTGGAAATCATTTAGTATGTCGTACAGTGGCATTGTTTCTGAGACCCTGATAGACAAGTTTGGATTCTTAGTGCAAATGGAAGTTGTTCTTTTCCTAACATGCAATATACAGAATAATTAGGAGCATAAAGTACCTTGGACATTTCCGAATGGGGAAGTTCTTAATTGGTACCCCATCTGGTGAATGCCCAGTTATTAAATTCTTCACCTACGATTTAAATATACTGATATCAGGTTAATGTATGTTATTGTAATTTTGTTAACGTTTGCATGGATAAACATTACCAACACGAGGCCAATGATATTTGCAGGGTGTTCATAAAACACAGGCACTCTGCTATGCCCCTTCTCCAGAATTAACTTGATCAAGTTGCTGCATAGTTTTCATAATAAGCATATTTATCAGGATGGAGGAGAGTGGAAGAATGAAGTTGGTGTCTGCATCAAACCTGTCGAGATTAGCATTAATATCGATCGCAAAAGTTTCAGAAAGGGGAGTCATGACGTCTCTTGCGACCTTCTCGGTGAGTTCCAGTGCTCCTCCAATTATGGTTGTTTCATCTCGTGTCAGCTCTCCTCCTTTTCCAGCCTGCACTTCTAAGAAACCCAACTCAGCCACACAAGAGAGGCAGATAGTTGCTCGTGTT

mRNA sequence

TTGATGCCATTGATCGGTCTATTCCATTATCGAGGAAACTACATATGGGACCTTGTGTTCTAAAACTTTCCACAAGGAGAAAGCTTGCAGCTTCACTGGGAAACTGGAAACTGATATTTTACATCTATCCGCGGAACGGTAAGGAAGATGAAGCTGTAGATAGAGGATATGCCTGCTATACCTGTAAAAGCTCCTCAATGACATCTTCAAGTGTTATGATGCCAATTGCTTCCCCCTCTTCAGTAAGCTTGGCCAGCATGTCATCTGCAATATGCAGGACCTCTGAGTCGAAGTCCTTGGACCATTTCTTACTTCCAGAAAACTTCCGATGGATGGAGGAGAGTGGAAGAATGAAGTTGGTGTCTGCATCAAACCTGTCGAGATTAGCATTAATATCGATCGCAAAAGTTTCAGAAAGGGGAGTCATGACGTCTCTTGCGACCTTCTCGGTGAGTTCCAGTGCTCCTCCAATTATGGTTGTTTCATCTCGTGTCAGCTCTCCTCCTTTTCCAGCCTGCACTTCTAAGAAACCCAACTCAGCCACACAAGAGAGGCAGATAGTTGCTCGTGTT

Coding sequence (CDS)

ATGGGACCTTGTGTTCTAAAACTTTCCACAAGGAGAAAGCTTGCAGCTTCACTGGGAAACTGGAAACTGATATTTTACATCTATCCGCGGAACGGTAAGGAAGATGAAGCTGTAGATAGAGGATATGCCTGCTATACCTGTAAAAGCTCCTCAATGACATCTTCAAGTGTTATGATGCCAATTGCTTCCCCCTCTTCAGTAAGCTTGGCCAGCATGTCATCTGCAATATGCAGGACCTCTGAGTCGAAGTCCTTGGACCATTTCTTACTTCCAGAAAACTTCCGATGGATGGAGGAGAGTGGAAGAATGAAGTTGGTGTCTGCATCAAACCTGTCGAGATTAGCATTAATATCGATCGCAAAAGTTTCAGAAAGGGGAGTCATGACGTCTCTTGCGACCTTCTCGGTGAGTTCCAGTGCTCCTCCAATTATGGTTGTTTCATCTCGTGTCAGCTCTCCTCCTTTTCCAGCCTGCACTTCTAAGAAACCCAACTCAGCCACACAAGAGAGGCAGATAGTTGCTCGTGTT

Protein sequence

MGPCVLKLSTRRKLAASLGNWKLIFYIYPRNGKEDEAVDRGYACYTCKSSSMTSSSVMMPIASPSSVSLASMSSAICRTSESKSLDHFLLPENFRWMEESGRMKLVSASNLSRLALISIAKVSERGVMTSLATFSVSSSAPPIMVVSSRVSSPPFPACTSKKPNSATQERQIVARV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18526-RACarg18526-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..176

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18526CmaCh07G006290Cucurbita maxima (Rimu)carcmaB0004
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18526Silver-seed gourdcarcarB000
Carg18526Silver-seed gourdcarcarB001
Carg18526Silver-seed gourdcarcarB002
Carg18526Silver-seed gourdcarcarB003
Carg18526Cucumber (Gy14) v2carcgybB0001
Carg18526Cucumber (Gy14) v2carcgybB0002
Carg18526Cucumber (Gy14) v2carcgybB0003
Carg18526Cucumber (Gy14) v1carcgyB0001
Carg18526Cucumber (Gy14) v1carcgyB0002
Carg18526Cucumber (Gy14) v1carcgyB0003
Carg18526Cucurbita maxima (Rimu)carcmaB0001
Carg18526Cucurbita maxima (Rimu)carcmaB0002
Carg18526Cucurbita maxima (Rimu)carcmaB0003
Carg18526Cucurbita moschata (Rifu)carcmoB0001
Carg18526Cucurbita moschata (Rifu)carcmoB0002
Carg18526Cucurbita moschata (Rifu)carcmoB0003
Carg18526Cucurbita moschata (Rifu)carcmoB0004
Carg18526Cucurbita moschata (Rifu)carcmoB0005
Carg18526Cucurbita pepo (Zucchini)carcpeB0001
Carg18526Cucurbita pepo (Zucchini)carcpeB0002
Carg18526Cucurbita pepo (Zucchini)carcpeB0003
Carg18526Cucurbita pepo (Zucchini)carcpeB0004
Carg18526Wild cucumber (PI 183967)carcpiB0001
Carg18526Wild cucumber (PI 183967)carcpiB0002
Carg18526Wild cucumber (PI 183967)carcpiB0003
Carg18526Cucumber (Chinese Long) v2carcuB0001
Carg18526Cucumber (Chinese Long) v2carcuB0002
Carg18526Cucumber (Chinese Long) v2carcuB0003
Carg18526Cucumber (Chinese Long) v3carcucB0001
Carg18526Cucumber (Chinese Long) v3carcucB0002
Carg18526Cucumber (Chinese Long) v3carcucB0003
Carg18526Bottle gourd (USVL1VR-Ls)carlsiB001
Carg18526Bottle gourd (USVL1VR-Ls)carlsiB002
Carg18526Bottle gourd (USVL1VR-Ls)carlsiB003
Carg18526Melon (DHL92) v3.5.1carmeB0001
Carg18526Melon (DHL92) v3.5.1carmeB0002
Carg18526Melon (DHL92) v3.6.1carmedB0001
Carg18526Melon (DHL92) v3.6.1carmedB0002
Carg18526Melon (DHL92) v3.6.1carmedB0003
Carg18526Watermelon (Charleston Gray)carwcgB0002
Carg18526Watermelon (Charleston Gray)carwcgB0003
Carg18526Watermelon (97103) v1carwmB0004
Carg18526Watermelon (97103) v1carwmB0005
Carg18526Watermelon (97103) v2carwmbB0002
Carg18526Watermelon (97103) v2carwmbB0003
Carg18526Wax gourdcarwgoB0001
Carg18526Wax gourdcarwgoB0003